>input_sequence_72747
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-----------------------CTATAAATCGCATGCACAAGGATCAGATCCATGGAGAAGATCAGTTGTGCTCGCCAC
CATTTGTTAATGCGCCGCAGGTTCGGGGTGAAGATGAATGCCAAGGCAGCCGCGCCCATCTTGCTCCTCGTGCTCCTTGT
TGGATGCCACGCGTTCTCCGCACACGGTAG---TAAATACCTTCTGTCTTTCCTTCAGAAAAGAGGATTTTTATTGATGC
TACTGGTAAAGGTTTAGTCGCATAGATAATCTGAATATCTGACGATGCGATGAAGGTGATGACGCCGAGGGATCGGGCGG
CGGTCGCCGTGAGCTAGGCGAGGGCGGCGGCAGCGGCAGCAAGGCTCAGGTCGCCGGGTTGTGCGTCGACAGCCCGTGCG
ACACGGACCCGAACCGGACGTGCTTCTGCTGCACGAGGCTGGCCAACGAGCCCTGCTACGACACGCTGAGGCAGTGCTTC
AACGTCTGCCCCAACTGCAACTTCCCCGTCTGCCCGCCGCCGGCGGCCTCGGCGGGCCGGCGTACTCGGTTCGTGTTAGC
TCCGGCGTCGGCGTGATCTGTATGCCGGCGATGGTTAGCTAATAAGGATTAATGTCGCGATGCATCCAGAATGCAGAGAA
TGGAAAAGCGTATCATGTC-----GTGTAAGCGTGGAGTTAATT------------------------------------
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-------------------------------------------------------
>chr6D_1_TraesCS6D01G170300
GCGGCAACGAAGCAGCCGCGTCCGCCTTGGTCTTCTTGGACTAGGATGAAGCTGCGG-------------TGGCTGCTTC
GTGCCTCCACCACGAGATTTGGCCGCGATCGCCTTCTTCATCGGCGGCACACCCATACCAGCGGCAGCCACGGGACGGGC
CCAAACAAATCTGGTGCGACGAGATGGGGGGCGGCATGGCGGCGTCGAGAAAGGTGGGAGCCGTGGCGGCGGCCATGGCG
AGGTGCGTAAGACTGGCTGCGGCGGCCGTAGGGTCGGGGGAGTCCGCCATGGGGTCTGGCAGGCGGTGGGCAGCGGGAGG
GCAGGCGGGCTGCGGGAAATTTCCGCATGACAGTTGGGCTTTCGTGCGACGCATTGCCACTTTACTCGACCGCGCGTCTG
ATGATGTATATTTGCATCACTTGATGATGTATTTTACATGTAGAGTAACACCTGAGAATTATTTTTTGCATCTATCATTT
ATTGGAGGGACGTTTTTGG-CCTTAGTTTTTTATTATTTTTACATATACATCATCTATTAGTGATGCTCTTACGAAAACA
TTATTAAAGAAAATATAACAATATATTCAAATCTTTGAAGGTGCTTAAATCTTCTTGCTCCTGCATTCATGGATGTCGTA
CTGTAA--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------GCAAAGCTCA
TTGCGCCTTTGAACCTCTGTCCAAAGGGAGCAATATGGTTAAACCAAGAAGTTTGTAGAAGCAACAGCCAAAAATGTCAT
TGATGTAGACCAAAATACACCAAAGCCACAATAAACTCGTA---------------------------------------
-----------------------------------------------------------------------------CGT
ACAATATAATGT-AAAAAGGTAAATACAATTACTTACTCTAAATAATTATTAGCACATGATATTGACATCGCTCGACGAT
CTTGCAATTAGGCAGTAATTTTTTTGCTACGACAATTAGGCAGTAATTGATCGCTTACCTTATCCTACCAACCATATAGA
GTATTAACTTACTTCCATACTTAGCG----------------------------TATTTCGCGGCCTGATCCCGTCTACA
TGATCTACACGTTCTGCTGCCCTCTATAAATCGCATGCACAAGGATCAGATCCATGGAGAAGATCAGTTGTGCTCGCCAC
CATTTGTTAATGCGCCGCAGGTTCGGGGTGAAGATGAATGCCAAGGCAGCCGCGCCCATCTTGCTCCTCGTGCTCCTTGT
TGGATGCCACGCGTTCTCCGCACACGGTAG---TAAATACCTTCTGTCTTTCCTTCAGAAAAGAGGATTTTTATTGATGC
TACTGGTAAAGGTTTAGTCGCATAGATAATCTGAATATCTGACGATGCGATGAAGGTGATGACGCCGAGGGATCGGGCGG
CGGTCGCCGTGAGCTAGGCGAGGGCGGCGGCAGCGGCAGCAAGGCTCAGGTCGCCGGGTTGTGCGTCGACAGCCCGTGCG
ACACGGACCCGAACCGGACGTGCTTCTGCTGCACGAGGCTGGCCAACGAGCCCTGCTACGACACGCTGAGGCAGTGCTTC
AACGTCTGCCCCAACTGCAACTTCCCCGTCTGCCCGCCGCCGGCGGCCTCGGCGGGCCGGCGTACTCGGTTCGTGTTAGC
TCCGGCGTCGGCGTGATCTGTATGCCGGCGATGGTTAGCTAATAAGGATTAATGTCGCGATGCATCCAGAATGCAGAGAA
TGGAAAAGCGTATCATGTC-----GTGTAAGCGTGGAGTTAATTATAAATCGACAGCGTCTTCTTTTCGGTGAATGACTG
AATTTATTCTGATATCCTGAACTGCTACACATTCGACAAATTTCTTCCTTAGCGAACACACGACAAATTTCGGACACTTT
GAGATGGATTTGGACAGAGTCAGGATCTTATTCCGCCCGCACGACCTACATGGTCTTCTTCGAGGGCTTGACACGCATGC
CAGGCGCCGAGCATCTGTGGACCTCAAAGGCACCCATGAGACTGAAATTTCCGGGATGGCTAGCTCTTTTTAAGAGCATC
TAGAGCCGGACTTTGCAAATTCGGCCCCTCAAACCTCCGCGGAAATGTTCGGGCGCGTC----------CGTGTGCATTT
ACCGGGCATGCCTCAAATTAGTCACTTTGCATCCGCTTCTCTCAGATTTCATCC-TTAAATCCATACAAAGCATGTAAAA
AAAAAATCCTACGTACTACT---CTA-GTTACTCTTCGTCG---AAGATGTCCATGACGACGGTGCCGGGCGCCGGCTGG
ACGGACGGGTAGGAGGGCTCCGGCTCATCCTCCTTCTACTCGACCTCATCCATGTAGGCGAACATCTCTGCCTCCTCTGC
-GGCCTCTTGTGCCTCCATCTCCTGTCGGCGACGGCATCTTGCCTCCGCAGCCGACTCCGACCGGAGGGAATCGAGGATG
ACCTGCT-CTCCGCCTGCACATCCCCGTCGCCAACGTCCCCGACATCCTCCTCCTCCGGCTCA---TCCCCC---TCCTC
CTCAAAGTCCTCCTCCTCCCCCTCCTCCAACTCC---TCC------------------GGATCCACTGCATCCGGAGGTA
GTCCCGCAGCGATCCAGGTTTCACGCCTAGACCGGATCTGCTCAAGGAGCTCGAGCCAGCGCTCCGGTGTCAGAAATGGC
TCGCTCCTCACCCGGCGGCGTGGGGGCATGGCTACTAGGCGGACGGGTGGAGTGGAAAGTGGCGGCGGCGGCGGATAGGA
GGAGGAAAATATGGATGGATG--ATAGTGTTT--GGTGCCGCCGGTCGACTTAAA
>chr6B_1
GCGGCAACGAAGCAGTCACGCCCGCCTTGGTCTTCTTCGACTAGGATGAACCTGCGGCTGGGTCGCGCGGTGGCTGCTTC
TTGCCTCCACCATGAGATTTGGCCGCGATCGTCTTCTTCATCGGCAGCACACCCATACGGGCGGCAGCCGCGGGACGGCC
CCCAGCAAATCTGGTGCGACGAGATGGGGT--GGCATGGCGGCGTCGAGGAAGGTGGGAGCCGTGGCGGCAGCCATGGCG
AGGTGTGTAAGACTGGCTGTTGCGGCCGCAGGGTCGGGGGAGTCGGCCATGGGGTCTGGCGGGCGGTAGGCGGCAGGAGG
GCAGGCGGGCTGCGGGAAATTTCCGCATGACAGTTGGGC-TTCGTGCGACGCGGGGCTGTTTTACTCGGCCGCGCGGCTG
ATGATGTATATTTGCATCACTTGATGATGTATTTTACATCTAGAGTAATACCTGAGAATTATTTTTTACATTTATCATTT
GTTGAAGGGACGGTTTTGGGCCTTGGTTTTTGATTACTTTTACATATATATCATCTATTAGCGATGCTCTTACATAAACA
TCGTTAAATAAAGTATAATAATATATTCAAATCTTTGAAGGTGCTTAAATCTTCTTGCTTTTTTTTAATAAAGAACCCAA
AGGGCATTTTAGATCTGATTATCATCGAGGAAAACAAAGGCCAGTATAATGGATAGACAACTGGACGTAGAACGACCAGT
AAAAAGTAAAATTACATTAAAAGCATACTAGTCGCCTTCTTCCTTTGACTATACGCTGCCCACCGGAGATTGAAAATTGC
ACTGAACCAACAGCAAAGAAAAGCGACACCTGCAAACGCCCCCATCATACAAGGCTTTGAAGACCGCAATAGCCACTCGG
CCCTTGAAGAGATGTAAAAAATCGTTGAAGCAACATCGGCTGGAGCATCACCCCCAAGCAGAAAAGGCTTGCAAAGCTCA
TTGCGCCTTTGAACCTGTGTCCAAATGGAGCAATCTGGCTAAACCTAGAAGTTTATAGAAGCAACAGTCAAAAATGTCAT
CGATGTAGACCAAAATACACCAAAGCCACAATAAACTCGTACTCCCTCCGGCCGAAAAAACTTGTCCCAATCTTGTTCCT
CAAATAAATGTACCTAGCACTAATTTGATTCTAGGTACATCCATTTGAGGGACAAGCTTTTTCGGACAAAGGAAATACGT
ACAACATAATGTAAAAAAGGTAAATACAATTACTCCA-------AATAATTAGCACATGATATTGACATCGCTCGATGAT
CTTG----------------------------CAATTAGGCAGTAATTGATCGCTTACCTTATCCTACCAACCATATACA
GTATTAACTTACTTCCATACTTACCG----------------------------TATTTCGCGGCCTGATCCCGTCTACA
TGATCTACACCTTCTGCTGCCCTCTATAAATCGCATGCACAAGGATCAGATCCATCGAGAAGATCAGTTGTGCTCGGTAC
CATTTGTTCATGCGCCGCAGTTTCTGGGTGAAGATGAATGCCAATCCAGCCGCGCCCATCTTGCTCCTCCTGCTCCTTGT
TGGATGCCACGCCTTCTCCGCACACGGTAC---TAAATACCTTCTGTCTTTCCTTCAGAAAAGAGGATTTTTATTGATGC
TACTGGTAAAGGTTTAGTCGCATAGATAATCTGAATATCTGACGATACGATGAAGGTGATGACGCCGAGGGATCGGGCGG
CGGTCGCCGTGAGCTGGGCGACGGCGGCGGCAGCGGCAGCAAGGCTCAGGTCGCCGGGTTGTGCGTCGACAGCCCGTGCG
ACGCGGACCCCAACCGGACGTGCTTCTGCTGCACGAGGCTGGCCAACGAGCCCTGCTACGACACGCTGAGGCAGTGCTTC
AGCGTCTGCCCCAACTGTAACTTCCCCGTCTGCCCGCCGGCGGCGGCCTCGGCGGGCCGGCGTACTCGGTTCGTGTTAGC
TCCGGCGTCGGCGTGATCTGTGTGCCGGCGATGGTTAGCTAGTAATGATTGATGTCACGAGGCATCCAGAATGCAGAGGA
TGGGAAATCATATCATGTCTAACCGTGTAAGCGTGGAGTTAATTATAAATCGACAGCGTCTTCTTTTC-GTGAATGACTG
AATTCGTTCCGATATCCTGAACTGCTACACATTCGACAAATTTCTTCCTTAGCGAACACACGACAAATTTCGGATACTTT
CAGATGGATTTTGACAGAGTCAGGATCTTATTCCGCCCGCACGACCTACATGGTCTTCTTCGAGGGCTTGACGCGCATGC
CGGGGGCCTCAAAGGC----ACCTCAAAGGCACCCATGAGACTGAAATTTCTCGGATGGCTAGCTCTTTTTAA-------
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-------------------------------------------------------
>chr6A_566
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-------------------AATATATTCAAATCTTTCAAGGTGCTTAAATCTTCTTGCTTTTGCATCCATCGATGACGCA
CCGTAA--------------------------------------------------------------------------
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----------------------------------------------------------------------GCAAAGCTCA
TTGCGCTTTTGAACCTCT-TCCAAAGGGAGCAAACTGGTTAAAGCTAGAAGTTTGTAGGAGCAGCAGCCAAAAATGTCAT
CGATGTAGACCAAAATACACCAAAGCCACAATAAACTCATA---------------------------------------
-----------------------------------------------------------------------------CGT
ACAATATAATGT-AAAAAGGTAAATACAATTACTCTA-------AATAATTAGCACATGATATTGACATCGCTGGATGAT
CTTG----------------------------CAATTAGGCAGTAATTGATCGCTTACCTTATCCTACCAA---------
GTATTAACTTACTTCCATACTTAGCGGGGTTTTTTTTTGCGATGATACTTAGCGTATTTCGCAGCCT-ATCCCGTCTACA
TGATCTACACCTTCTGCTGCCCTCTATAAATCGCATGCACAAGGATCAGATCCATCGAGAAGATCAGTTGTGCTCGCCAC
CATTTGTTCATGCGCCGCAGGTTCGGGGTGAAGATGAATGCCAAGGCAGCCACGCCCATCTTGCTCCTCCTGCTTCTTGT
TGGATGCCACGTGTTCTCCGCACACGGTACTAATAAATACCTTCTGTCTTTCCGTCGGAAAAGAGGATTTTTCTTGATGC
TACTGGT-----TTTAGTCGCATAGATAATCTGAATATCTGACGATACGATGAAGGTGATGACGCCGAGGGATCGGGCGG
CGGTCGCCGTGAGCTAGGCGAGGGCGGCGGCAGCGGCAGCAAGGCTCAGGTCGCCGGGTTGTGCGTCGACAGCCCGTGCG
ACGCGGACCCGAACCGGACGTGCTTCTGCTGCACGAGGCTGGCCAACGAGCCCTGCTACGACACGCTGAGGCAGTGATTC
AGCGTCTGCCCCAACTGCAACTTCCCCTTCTGCCTGCCACCGGCGGCCTCAGCGGGCCGGCGTACTCGCTTCGTGTTAAC
TCCGGCGTCGGCGTGATCTGTATGCCGGCGATGGTTAGCTAATAAGGATTAATGTCGCGAGGCATCCAGAATGCAGAGTA
TGGAAAAGCGTATCATGTCTAACAGTGTAAGCGTGGAGTTAATTCTAAATCGACAGCGTCTTCTTTTCGGTGAATGACTG
AATTTATTCTGATATCCTGAACTGCTACACATTCGACAAATTTCTTCCTTAGCGAACACACGACAAATTTCGGATACTTT
CAGATGGATTTGGACAGAGTCAGGATCTTATTCCGCCCGCAGGACTTGCATGGTCTTCTTCGAGGGCTTGACACGCATGC
CAGGCGCTGAGCATACGTGGACCTCAAAGGCACCCATGAGACTGAAATTTCCGGCATGGCCAGCTCTTTTTATGAGCATC
TAGAGCCGGACTTTACAAATCCGGCTGCTCGAACGTCCGCGAAAGCGTTCGGGCGCGTC----------GATGTGCACTT
GCGAGGCATGTTTTAAATTAGCCATTTTGCATTCGCTTCTGTCAGATTT-------------------------------
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-------------------------------------------------------
>chr6A_1919
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---------------------------------------------------------------------TTAAGAGCATC
TATAGTCGGATTTGGCAAATCCGGCCTCTCAAATGCTCGCGGACGCTTTCGGGCGCGTC----------CATGGGCATTG
ACCGGACACGTGTTAAATTAGACACTTTGCATCCACCTCTCTTATATTTCATCCTCTAAATCCATACAAAGCATTC--AA
AAGAAATCTTACGTACTACC---CTA-GCTACTCTTCGTCGTTGAAGATGTCCAGGACGACGGTGTCGGGCGCCGGCTGG
ACGGGCGGGTAGGAGGGCTCCAGCTCATCCTCCTCCTGCTCGACCTCATCCATGTAGGCGAGCATCTCCGCCTCCTCTGC
-AGCCTCTTGTGCCTTCATCTCCTGCCGGCGACGGCGTCTTGCCTCCGCAGCCGACTCTGACCGGAGGGAATCGAGGATG
GCATGCTGCTCCGGCTGTAGATCCCCGTCGCTAGCGTCCCAGGCATCCTCCTCCTCTGGCTCA---TCCTCC---TCCTC
CTCAAAGTCT------TCCTCCTCCTCCAACTCCTCCTCC------------------GGATCCACTTCAACCGGAGGTA
GCCCCGCGGCGGTCCAGGCTTCAAGCCTAGCCCGTATCTGCTCAAGGAGCTCGAGCCGGCGCTCCGGCGTCAGAAATGGC
TCGCTCCTCACCCGGTGGCGTGTGGGCATGGCTACTAGGCGGACGGGTGGAGTGGAA-GTGGCAGCGGAGGCAAACAGGA
GGAGGAAAATGTGGATGCATG--GTAGGGTTAC-GGTGCCGCCGGTCGACTTAAA
>chr4D_1920
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----------------------------------------------------------------------TAAGAGCATC
TACAACCGGGCTTTGCAAATCCGGCCCCTCAAACGTCCGCGGACGCGATCGGGCGTGTC----------CGCAGACAGTG
ACCGGTCACGCCTTAAATTAGCCACTTTGCATCCGTCTCTCTTATATTTCATCCCCTAGATCCACACAAAGCATGC--AA
AAGAAATCTTACGTACTACC---CTA-GCTACTCTT--------GAGATGTCCACGACGACGGTGCTGGATGCCGGTTGG
ACGGGCGGGTAGGAGGGCTCCGGCTCATCCTCCTCCTGCTCGACCTCATCCATGTAGGCGAGCATCTCCGCCTCCTTCGC
-GGCTTGCTGCACCTCCATCTCCTGCCGACGACGGCGTCTGGCCTTCGCAGCCGACTCCGACCGGAGGGAATCGAGGATG
GCATGTTGCTCCGCCCGTAGATCCACGTCGCCAGCGTCCCCCACATCCTCCTCCTTCGGCTCC---TCCTCC---TCCTC
CTC------CA------CCTCCTCCTCCTCCTCCTCCTCC------------------GGATCCACTGCATCCGGAGGTA
GCCCCGCGGCGTTCCGGGCTTTGCACCTAGCCCGGATCTGCTCAAGGAGCTCGAGTCGGTGCTCCGGCGTCAGAAATGGC
TCGCTCCTCACCCGGCGGCGTGGGGACATGGCTACTAGGCGGACGGGTGGAGTGGAAAGTAGCGGCGGCGGCGGACAAGA
GGAGGGAGATGTGGATGGATG--GTAGGGTTTC-GGTGCCGCCGGCCGACTTAAA
>chr7D_1920
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----------------------------------------------------------------------TAAAAGCATC
TACAGCG-GGACTTGCAAATTCGGCCCCTCAAACGCCCGCGGACGTGATCAGGCGCGTC----------CGCGGACAGTG
ACCGGTCACACCTCAAATTAGCCA-TTTTCATCTGAGTCTCACATATTTGAACCCCTATATCCATACAAAGCATGC--AA
AAAAAATCCTACGTACTACC---CTA-GCTAATCTTCACCGTCGGAGATGTTCACGACAACGGTGCCGGGCGCCGGCTGG
ACGGGCGGGTAGGAGGGCTCCGGCTCCTTCTCTTCCTGCTCGTCATCATCCATGTAGGCGAGCATCTCCGCCTCCTCCGC
-GGCCTGATGCGCCTCCATCTCCTGCCGACGACGGCGTCTGGCTTCCGCAGCCGACTCCTAGCGGAGGGAATCGATGATG
GCATGCTACTCTGCCTGCAGATCCACGTTGCCAGCGTCCCCCACATCCTCCTCCTCCTCCTCAACCTC---C---TCCCC
CTC------CTCCTCCTCCTCCTCCTCCAACTCCTTCTTC------------------GGATCCACTGCATCGGGAGGTA
GCCCCGTGGCGATCCGGGCTTCGCACCTTGCCCGAATCTACTCAAGGAGCTCGAGCCGGCGCTCCGGCGTTAGAAATGGC
TCGCTCCTCACCCGATGGCGTGGGGGCATGGCTACTAGGCGGACGGGGAGAATGGAAAGTGGCGACGGTGGCGGACAAGC
AAAGGAAAATG----TGGATG--GTAGGGTTTC-GGTGCCGTCGACCGACTTAAA
>chr6B_1922
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------------------------------------------------------------------------AGAGCATC
TACATCCGGACTTGGCAAATCCGGCCCCTCAAACGCCCGTGGACGGGCCCGGGTGCGTC----------CACAGGTACTG
ACCGGGCACGCCTCAAATTAGTCACTTTGCATCCATCTCTTTCATATTTCATCCCCTAAATCCATATAAAGCATGC--AA
AAGAAATTCTACGCACTACATATACGTACTACTCTTCGTCG-CGGAGATATCCACGAAGACGGTGCCGGGCGCCAGCTGG
ACGGGCGGGTAGGAGGGCTCCGGCTCATCCTCCTCCTGCTTGACCTCATCCATGTAGGCGAGCATCTTTGCCTCCTCCGC
-GGCCTCTTGCGCCCCCATCTCCTGCCGGCGACGGCGACTTGCCTCCGCAGCCGATTCCGACCTAAGGGAATCGAGGATG
GCCTACTGCTCCGCCTGCAGATCCCCGTCGCCAGCGTCCCCCACATCCTGCTCCTCCGGCTCA---TCCCCC---TCCTC
CTCAAAGTCCTTTACCTCCACCTCCTCCAACTCCTCCTCT------------------GGATCCACTGCATCCGAAGGTA
GCCCCGCGGTGATCCGGGCTTCACGCCTAGCCCGGATATGCTCAAGGAGCTCGTGCCGGCGCTCCAGCGTTAGAAATGGC
TCGCTCCTAACCCGGCGGCCGAGGGGCATGGCTACTAGGCCGACGGGTGGAGTGGAAAGTGGCGACG---ACGGATAGGA
GAAGGAAAATGTGGATATATG--GTAGGGTTTC-GGTGCCGCCAGATGACTTAAA
>chr6B_1922
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------------------------------------------------------------------------AGAGCGTC
TACAACC-GACTTTGCAAATCCGGCTTCTCAAACGTTCGCGGGCA----------CGTCATGATGTGTCCGCGAGCACTG
ACTGGACACGTCTTAAATTAGTCACTTTACATCCGTCTCTCTCATATTTCATCTTCTAGATCCATACAAAATATGT--AA
ATGTAATCCTGCATACTACC---CTA-ACTACTCTTCATCGTCGAAAATGTCCATGGCGACGGTGCCGAGCTCCAGCTAG
ACGGGTGGGTACGAGGGCTCCGGCTCATCCTCCTCCTGCTCGACCTCATCCATGTAGGCGAACATCTCCGCCTCCTCCGC
AGGCCTCTTGCGCCTCCATCTCCTGCCTGCGACGGCGTCTTGCCTCCGCAGTCGACTCCGACCAGAGGGAATCGAGGATG
TCATGCTGCTTCACCTGCAGATCCCCGTCGCTAGCGTCCCCCACATCCTCCTCCGCCGGCTCA---TC---C---TCCTC
CTA------CTCCTCGTCCTCCTTCTCCAACTCCTCCTCC------------------GGATCCACTGCATCTGGAGGTA
GCCCCGCGGCGATCCAGACTTCGTGCCTAGCCCGGGTCTGCTCAAGGAGCTCGAGTCGGCGCTTCGGCGTCAGAAAGGGC
TTGCTCCTCACCCGACGGCGTGAGGACATGACTACTAGGCTGACGGGTGAAGTAGAAAGTGGCGGCAGCGGCGGACAAGA
GGAGGAATATGTGGATGGATG--ATATGATTTC-AGTGCTGCCGATCGACTTAAA
>chr2B_1922
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------------------------------------------------------------------------AGAGCATC
TACAACCGGACATTGCAAATCCGGCCCCTCAAACGCACGCGGACA----------CGTC----------TGCGGGCATTG
ACCGGGCACGCCTCAAATTAGCCACTTTGCATCCTTCTCACTCTTATTTCATCCCCTAAATCCATACAAATCATGC--AA
AAGTAATCCTACGCACTACC---CTA-GCTACCTTTCATCGTCGGAGATGCCCACGACGACGATGCCGGGCGCTGGCTGG
AACGGCGGGTAGGAGGGCTCCGACGCATCCTCCTCCTGCTCGACCTCATCCATGTAGGCAAACATTTCCGCCTCCTCTGC
-GGCTTCTTGCGCCTCCATCTCCTGCCGACGACGTCGTCTTGCCTCCACAGCCGACTCCAGCCGAAGGGAATCGAGGATG
GCCTGCTGCTCCGCTTGCAGATCCCCATCGCCAGCGATCCCCACATCCTCCTCCTCCGGCTCA---TCATCATCATCCTC
CTC------CTCCTCCTCCACCTCCTCCAACTCCTTCTCC------------------GAGTCCACTGCATCTAGAGGTA
GCCCCGCGGTGATTCGGGCTTCACGCCTAGCCCGGATCTGCTCAAGGAGCTCGAACAGGCGCTCCGGTGTCAGAAAGGGC
TCGCTCCTCACCCGGCGGCGTGGGGGCATGGCTACCAGGCGGACGGGTGGAGTGGAAAGTGGTGGCGGCGGCGGAGAGGA
GGAGGAAAATATGGATGGATG--ATAGAGTTTC-GGTGCCGCCGATCGACTTAAA
>chr3B_1985
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-------------------------------------------------------CGTC----------CGCAGGCACTG
ACAGGGCACGCCTTAAATTAGCCACTTTGCATCCGTTTCTC--ATATTTTATCCCCTAAATTCATACAAAGCATGC--AA
AAGAAATCCTACGTACTACG---CTA-GCTACTCTTTGTCGTCGGAGATGTCCACGACGACGGTGCCGGGCGCCGGCTGG
ACGGGCGGGTAGGAGGGCTCTGGCTCATCGTCCTCCTGCTCGACTGCATCCATGTAGGCAAACATCTCCGCCTCCTTCTC
-GTCTTCTTGTGCCTCCATCTTCTGCCGGCGACGGCGTCTTGCCTCCGCAGCCAACTCCGACTGGAGGGAATCGAGGATA
GCCTGCTGCTCCGCCTGCAGATCCCCGCCGCCAACGTTCCCCACATCCTCCTTCTCCGGCTCA---TCCTCC---TCCTC
CTC------CTTCTCCTCCACCTCCTCCTCCTCCCAA--------------CTCCTCCAGATACACTGCATCCGGAGGTA
CCCCCA---CGATCCGGGCTTCGCGCATAGCCCAGG-TTGCTGAAGGAGCTCGAGCCGGCGCTCCAGCGTTGGAAATAGC
TCGCTCCTTACCCGGCAGCGGGGGGGCATGGCTACTAGT-GGACGGGTGGAGTGGAAAGTGGCGAGGGCGGCGGACAGGA
GGAGGAAAGTGGCGACGGGTGGAGTAGGGTTTC-GGTGCCGCCGGCCGACTTAAA
>chr5B_2009
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---------GCCTCAAATTAGCCACTTTGCATCAACCTCTCTCACGTCTCATTTCCTAGATCCATACAAAGCATGC--AA
AAGAAATCCTACGTACTACC---CTA-GCTACTCTTCGTCGTCGGAGATGTCCACGATGAGGGTGTCGGGCGCCAGCTAG
ACGGGCGGGTAGGAGGGCTCCGACTCATCCTCCTCCTGCTTGACCTCATCCATGTAGGCGAACATTTCCGCCTCCTCCGC
-GGCCTCTTGCGCCTCCATCTCCTGCTAGCACGGCCGTCTTGCCACCGCAGCCGACTCCGACCGGAGGGAATCGAGGATG
GCCTACTGCTTCGCCTGTAGATCCCCGTCGCCAGTGTCCCACACATCCTCCTCCTCCGGCTCA---TTCCCC---TCCTC
CTC------CTCCTCATCGCCGTCG------------TCCTCCTCCACCTCCTCCTT------CACTGCATCCGGAGGTA
GCCCCGCGGCGATCTGGGCTTCGCGCATAGCCCGGATCTGCTCAAGGAGCTCGAGCCGACGCTTCGGCGTAAAAAATGGC
TCGCTCCTCACCCGGCGGCGTGGGGGTATGGTTACTAGGCGGACGGGTGGAGTGGAAAGTGGCGGCGGCGGCGAGCATGA
GGTGGAAAATGTGGATGAATG--GTAGGGTTTC-GGTGCCGCCGGTCAACTTAAA
>chr2A_2011
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-----------CTCAAACGAGTCACTTTGCATTCACCTCTCTCATATTTTATTTCTTAGATCCAAACAAAGCATAC--AA
AAGAAATCTTACCTACTACTACCCTA-GTCACTC-TTGTTATCGGAGAAGTTCACGACAACGGTGTCGGGCGCCGACTGG
ATGGGCGGGTAGGAGGGCTCCGGCTCATCCTCCTCCTACTCGACTTCATCTATGTAGGCGAGCATCTCCGCCTCCTCTGT
-GGCCTGTTGCGCCTCCATCTCCTGCCGACGATGGCGTCTGGCCTACGCAGCTAACTCCGACAGAAGGGAATCGAGTATG
GCATGCTGCTCCGCCTGCAGATCCCCATCGCCAGTGTCCCCCACATCCTCCTCCTCC------------------TCCTC
CTC------CTCCTCCTCCCCCACCTCCTCCTCCTTCTCCTCCTCCAACTCCTCCTCGGGATCCACTGCATCTGGAGGTA
GCCCCGTGGCGATCCGGACTTCGCGCCTAGCCCGGATTTGCTCAAGGAGCTCGACCCGGCGCTTCGGCGTCAGAAATGGC
TGGCTCCTCACCCAGCGGCGTGGGGGCATGGCTACTAGGCGGACGGGTGGAGTGGAAAGTGGCGGCGGTGACGGACAGAA
GGAGGAAAATGTGGATGGATG--ATAGGGTTTTAGGTGCCGCCGGTCGACTTAAA
>SNPs
---------------S-S--S----------------S------------S-----------------------------
S-----------S------------------S-------------S------------SS---------S--------S-
--S-S------------------------SSS-----------------S--------------------S---------
-----S-------------SS-------S---------------S---------------S------S---S--S-----
---------------------------------------S------------SSS--SSS--------S-------S---
---------------------------------------S--------S------------------S---S--------
S---S-------S-----------S------S----S-----------S------------S-----------SS-----
-SS-----S---S-----S----------------------------------------SS-----S---S----S--S-
-S------------------------------------------------------------------------------
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----------------------------------S----------S----------------------------------
S-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------SSSSSSSSSS---S----------------------------S---
----SSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------------------------------------S-
--------------------------------------------------------------------------------
----------S--------------------------------------------S------------------------
--------S------------------------------------------------------------S----------
-----------------------------S--------------------------------------------------
----------------------------------------------S---------------------------------
--------------------------------------------------------------------------------
--S-----------------------------------------------------------------------------
-S------------------------------------------------------------------------------
------------------------------------------------------------S-----------------S-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------S-----
S-------------------------------------------------------------------------------
--------------SS----------------------------------------------------------------
----------------------------------S---------------------------------------------
----------------------------------------------------------------------------SS--
--------------------------------------------------------------------------------
----S-----------------------------S---------------------------------------------
-------------------------S----------S-------------------------------------------
S------------------S------------------------------------------------------------
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-S-----S----------S-----------S--------------------------S----------------------
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---------------------------S---------------------------
>forward_636
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-------------------------------------------------------TGCTCCTGCATTCATGGATGT----
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>reverse_2979
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------------------TTTCACGCCTAGACCGGATC------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
