>input_sequence_72730
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----------------------------------------------------------------------ATGTACCACC
ATAACAATGGCGAGCTTGCCAGCTTCCACTTCCTCCCGCCCCCAAACCCTTCCTCCTCCTTCACCACTCACCACCACATG
AACATGGCCTTGCCCCCTCAAGCCTACTTCCCGCCCTCCTTTGATCCTGCCGCTCTACTCGCCGACGTCGACGACGTGGC
AGCAGCCTTTGAGTTGGACGCTATCCTACTAGCAGAAGAAGCGGCTCACCTCGCCGGCGGCAATGGCTCGCCCAGCTCGG
GCTCCGACGCCGGTGGCGGAAGCTACCTCCAGGTGGGCGGTGCTGGCGCTGGAGTTGGCGCCGCGGAGGAGGAGAGGAGG
CGGCGGCGAATGGTCTCGAACCGGGAGTCCGCGCGGCGGTCGCGCATGCGCAAGCAGCGGCAGCTGAGCGAGCTGTGGGC
GCAGGTCACGCACCTCCGCGGAGCCAACCGCCGCCTCCTCGACGAGCTCAACCGCGCATTGTGCGAGTGTGCCGGCGCTC
GCCGCGAGAGCGCCCAGCTCAGGGACGAGAAGGCCAAACTGAATGAGAAGCTCGAGCAGCTGCTACAGCAATCGGCACCG
GAGAAGAAGGCC---------------------TCGAGCAATCACAGTGGCTGCTCCTCGGAGCCATGCAAGAACAGCAC
AGCTGCTGCAGCTTCTATCGAATGA-------------------------------------------------------
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--
>chr7A_1_TraesCS7A01G181100
ATAACCTGCAAATTTTCTACCGCATCCAGGACCAGTCCACAGACATGGGTGTAGGAGGACGCCATCCAACCGCAGTCGCA
TACATTTCGAACCGCATTTTAACTAACCGAACAAAATTCACACAAACCGGCCGATATTCATCGAAGTTTGGATAAAATGA
AGCACAAATCATTCATATGTAGCATGCAAATAAGTCTAGTATAACAATGTCTTAAATTTGACTACATTAACCAGATGT--
-ACAAGTTTTTCATCAACGGATCATGTCGTCGCATACATACTGCCCATTCAGTTTCATCAAACAGTGTGTGTACGTAAAT
AGCCGGGCGTCCCCATATCCGCCCCATATTTTGGGCTGGATATGAGGGATGTCTGTCAGTCCGCGCATTTGAAGCGCCCG
CCAGGGTCAAAATTTCCTGACCTGCCAGTGACCGGGC-------------GTTTGAGGCGGGTTTGGACTGCCCGGACTC
TAAGCTACCGAACTCTAGCTCCATATAAGATCTCAGCATAGTTTTACCTTAATCCAATATATTCTTAGTTAAAATATGTC
CAAACA-TAATGAATTTTGTCTGGTTTATATGAATATCATCCGGTTTCAATGAAGTTTGCCCGACTTGTCTAAAATTTTG
AATTGTATGCTGGCAGCGTTGGATGCCCGTATCCCGCATCCACCCATATCCCGCATCTGTGTCCGCGAACTAATAACTCT
ATCCGTGGACGGATGCGGGAAAGAATTTGCAGGTCAATGTTGAAGATGCACTAAGCTTGCCCATATTTGTAAGCTACCAA
ACTCTAGCTCGATATAAGATTCTCAGGCTACAAAAAAAAGGATAATAT-----GA--------GAGAGAGAAGAGAAACC
ATTGATTCTCTCTTGGGCAACAAAGCCACTGTGCCACACTATAAAAGGCCATGGCTTCTTCTCCTCGTCTGCCATAGCCA
AGAAACAAGATCTACTAGTGCTACTACACTAGAAGCTGCCATAAGCAAAGAAGAGACAATAAACAGGACCATGTACCACC
ATAACAATGGCGAGCTTGCCAGCTTCCACTTCCTCCCGCCCCCAAACCCTTCCTCCTCCTTCACCACTCACCACCACATG
AACATGGCCTTGCCCCCTCAAGCCTACTTCCCGCCCTCCTTTGATCCTGCCGCTCTACTCGCCGACGTCGACGACGTGGC
AGCAGCCTTTGAGTTGGACGCTATCCTACTAGCAGAAGAAGCGGCTCACCTCGCCGGCGGCAATGGCTCGCCCAGCTCGG
GCTCCGACGCCGGTGGCGGAAGCTACCTCCAGGTGGGCGGTGCTGGCGCTGGAGTTGGCGCCGCGGAGGAGGAGAGGAGG
CGGCGGCGAATGGTCTCGAACCGGGAGTCCGCGCGGCGGTCGCGCATGCGCAAGCAGCGGCAGCTGAGCGAGCTGTGGGC
GCAGGTCACGCACCTCCGCGGAGCCAACCGCCGCCTCCTCGACGAGCTCAACCGCGCATTGTGCGAGTGTGCCGGCGCTC
GCCGCGAGAGCGCCCAGCTCAGGGACGAGAAGGCCAAACTGAATGAGAAGCTCGAGCAGCTGCTACAGCAATCGGCACCG
GAGAAGAAGGCC---------------------TCGAGCAATCACAGTGGCTGCTCCTCGGAGCCATGCAAGAACAGCAC
AGCTGCTGCAGCTTCTATCGAATGAAATGTTGTTTTTACTCATAT----TATCCACCCAAATTTTTAGAGGATAACTACT
ACTGTATCA---ATAATAAGATTATAAGAGCATGTGTTACTAAGCAATGATAAATAATT-ATTTAATGGCGATAGCTGGG
GTCATGCATGCATGCACCCTGCAACCAGTTTCCCTATCAGGAATATGTTTTGTGTAACAGATTTTGGTACTTATCCTGTG
TTGATAAATTAACATGGATAGGAGGATGTAGTGCTATATATTCGAGATAGCCGACCACCCATTTAGTAGTTATCTGAGAA
AAAATTAAAACCGGTAGTTTTTTGGAACCCTAGGCTGTAAAGTAGTAGTTTTATGCTATTTACTCTATATATTTGCAAGT
TGCAAAGCTTGTGATGAATGAAACCAATACAACAGTAGCAAGACCAAAGTATGAGAGTGAGAGATCAAGGAAGGATCAAA
GACCGGTGAGGACGACAAGTGTTTGGCTTTCCATAATGCGGGTGGACTACAAG-GGAAAAAATATAGTGCATTCCACCCT
TTTTAACGAAATTTAATGATTATAATTTTGAACTTTTTCCTCCACTTGATGATGTCATGAGCTCAACTTGTATGTAATGC
TTTGTGATTGCTAATGTATCGTCTACTTCGTTGATGCCGACTTACCTACCTACCAGCTGCTTTTCTTTGGCAGCTAAGTC
GCGC--AGCATGCTATAGTTTTTGCAATGTTGTATCGAACAAGGTTCGACATATGTATCTAACAATTTTGGCATATGATT
GTAGCATCAATGCAAGATCTAACAACATATCCTATTCACTGAGATGCTTGTGGG-ATATGTTCCCAAGAATCTTGAGCAA
AAGCACAGTAACATGTGCATGCATGCCCCAAAACAAATCTACGCATGCATGC-TTTTCACAATAGTATATAAATTCCATT
GCCACGTGCATAAGC----GTGAATGTTTTGTTAATCGAAACGGAGAATGAACTTCAGGAGTTGGTATTACAGCATGGAA
AC
>chr7D_2
-TAACCTGTAAATTTTCTACCGCATCCAGTACCTGTCCACGGATATGGATGTGGGAGGACACCATCCAACCGCAGCCGCA
TACATTTCGAACCGCATTTTAACTAATTGAACAAAATTCACGCAAACCGGCCGATATTCATCAAAGTTTGGATAAAAAGA
AGCACAAATCATCTATACGTAGCATACAAATAAGTCTAGTATAACAATGTCTCAAATTTGACTACATTAGCCAGATGTAC
AACAAGTTTTTCATCAACGGATCATGTCGTCCCATACATACTGCCCATTCAATTTCAT-AAACAGTGTGTGTACGTAAAT
AGCCGGGCACCCCCATATCCGCCCCATATTTGA-GCTGGATATGAGGGATGTCTGTCAGTCCGCGCGTTTGAGGCGTCCG
TCAGGGTCAAAATTTCGTGACCTGCCAGTGACCGGGCCGTCTATCTGGACGTTTGAGGCAGGTTTGGGGTGCCCCAACTC
TAAGCTACCGAACTCTAGCTCCATATAAGATCTCAACATAGTTTTACCTTAATCCAGTATATTTTTAGTTAAAATATGTC
CAAAATGTAATGAATTTTGTATGGTTTATATGAATATCATCCGGTTTCAATGAAGTTTGTCCGGTTTGTCTAAAATTTTG
AATTGTATGCTGGCAGTGTTGGATGCCCGTATCCCGCATCC-----------------GTGTCCGCGAACTGATAACTCT
ATCCGTGGACGGATGCGGGAGAGAATTTGCATGTCAGCGTTGAAGATGCACTAACCTTGCCCATATTTGTAAGCTACCAA
ACTCTAGCTTGATATAAGATTCTCAGGCTACAAAAAAAAGATACTATACGAGAGA--------GAGAGAGAAGAGAAACC
ATTGATTCTCTCTTGGGCAACAAAGCCACTGTGCCACACTATAAAAGGCCACGGCTTCTTCTCCTCATCTGCCATAGCCA
ACAAACAAGATCTACTAGTGCTACTACACTAGAAGCTGCTATAAGCAAAGAAGAGACAAGAAACAGGACCATGTACCACC
ATAACAGTGGCGAGGTTGCCAGCTTCCACTTCCTCCCGCCCCCAAACCCTTCCTCCTCCTTCACCACCCACCACCACATG
AACATGGCCTTGCCCCCTCAAGCCTACTTCCCGCCCTCCTTCGATCCTGCCGCTCTACTCGCCGGTGACGACGACGTGGC
AGCAGCCTTTGAGTTTGACACCATCCTACTG---GAAGAAGCGGCTCACCTCGCCGGCGGCAATGGCTCGCCCAGCTCGG
GCTCCGACGCCGGTGGCGGAAACTACTGCCAGGTGGGCGGTGCTGGCACTGCAGTTGGCGCCGCGGAGGAGGAGAGGAGG
CGGCGGCGAATGGTCTCGAACCGGGAGTCGGCGCGGCGGTCGCGCATGCGCAAGCAGCGGCAGCTGAGCGAGCTGTGGGC
GCAGGTCACGCACCTCCGCGGAGCCAACCGCCGCCTCCTCGACGAGCTCAACCGCGCATTGCGCGGGTGCGCCGACGCCC
GCCGCGAGAGCGCCAAGCTCAGGGACGAGAAGGCCAAACTGAATGAGAAGCTCGAGCAGCTGTTGCAGCAATCAGCACCG
GAGAAGAAGGCCGCC------TCCTCTCCGGCCTCGAGCAATCACAGTAGCAGCTCCTCAGAGCCATGCAAGAACAGCAC
AGCTGCTGCAGCTTCTATCGAATGAAATGTTGTTTTTACTCATAT----TATCCACCCAAATTTTTAGAGGATAACTACT
ACTGTATCA---ATAA---GATTATAAGAGCATGTGTAACAAAAGAATGTTAAATAATTTATTTAATGGCCATGGCTGGG
GTCATGCATGCATGCACCCTGCAATCAGTTTCCCTATCAGGAATATGTTTTGTGTAACAGATTTTGGTACTTATCCTGTG
TTGATAAATTAACATGGATAGGATGTAGTG--------------------------------------------------
----------------------------------------------------------------CTATATATTTGCAAGT
TGC-AAGCTTGTGATGAATGAAACCAATAGAACAGTAGCAAGACCAAAGTATGAGAGTGAGAGATCAAGGAAGGATCAAA
AACCGGTGAGAACGACAAGTGTTTAGCTTTCCATAATGCGG-TGAACTACAAA-GGAAAAAATATAGTGCATTCCACCCT
TTTTAATGAAATTTAATGATTATAATTTCGAACCTTTTCCTCCACTTGATGATGTCATGAGCTCAACTTGTATGTAATGC
TTTGTGATTGCTAATGTATCGTCTACTTCGTTGATGTCGACTTACCTACCTATCAGCTGCTTTTCTTTGGCAGCTAAGTC
TCCC--AGCATGCTATAGTTTTTGCAATGTTGTATCGAACAAGGTTCGACATATGTATCTAGCAATTTTGGCATATGATT
GTAGCATCAATGCAAGATCTAACAACATATCCTATTCACTGAGATGCTTGTGGGTATATGTTCCCAAGAATCTTGAGCAA
AAGCACAGTAACATGTGCATGCATGCCGCAAAACAAATCTACGCATGCATGC-TTTTCACAA---TATATAAATTCCATT
GCCATGTGCATAGAC----GTGAATGTTTTGTTAATCCAGATGGAAAATGAGCTTCAGGAGTCGGATTTACAGCATGGAA
AC
>chr7B_777
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-------------------------------------------------------------------------CTACCGA
ACTCTAGCTCCATATAAGATTCTCAGGCTACAAAAAAAAGGATGACATGATACAGCCCAACATGAGAGAGAAGAGAAGGC
ATTGTTTCTCTCTTGGGCAACAAAGGCACTGTGCCACACTATAAAAGGCCATGGCTTCTTCTCCTCGTCTGCCATAGCCA
ACAAACAAGATCTACTAGTGCTACTACACTAGAAGCTGCCATAAGCAAAGAAGAGACAAGAAACAGGACCATGTACCACC
ATAACAATGGCGAGGTTGCCAGCTTCCACTTCCTCCCGCCCCCAAACCCTTCCTCCTCCTTCACCACCCACCACCACATG
AACATGGCCTTGCCACCTCAAGCCTACTTCCCGCCCACCTTCGATCCTGCCGCTCTACTTGCCGGCGACGACGACGTGGC
AGCAGCCTTTGAGTTTGACGCTATCCTACTC---GAAGAAGCGGCTCACCTCGCCGGCGGCAATGGCTCGCCCAGCTCGG
GCTCCGACGCCGGTGGCGGGAACTACCTCCAGGTGGGCGGTCCTGGCGCTGGATTTGGCGCCGCAGAGGAGGAGAGGCGG
CGGCGGCGAATGGTCTCGAACCGGGAGTCGGCGCGGCGGTCGCGCATGCGCAAGCAGCGGCAGCTGAGCGAGCTGTGGGC
GCAGGTCACCCACCTCCGCGGAGCCAACCGCCGCCTCCTCGACGAGCTCAACCGCGCATTGCGCGGGTGCGCCGACGCCC
GCCGCGAGAGCGCCCAGCTCAGGGACGAGAAGGCCAAACTGAATGAGAAGCTCGAGCAGCTGTTGCAGCAATCGGCACCG
GAGAAGAAGGCCGCCTCCTCCTCCCCTCCGGCCTCGAGCAATCACAGTGGCCGCTCCTCGGAGCCATGCAAGAGCAGCAC
AGCTGCTGCAGCTTCTATCGAATGAAATGTTGTTTTTACTCATATATATTATCCACCCAAATTTTTAGAGGATAACTACT
ACTGTATCAATAATAA---GATTATAAGAGCATGTGTTATTGAATAATGATAAATGA-TTATTTAATGGCGATGGCTGGG
GTCATGCATGCATGCACCCTGTAATCAGTTTCCCTATCAGGAATATGTTTTGTGTAACAGGTTTTGGTACTTATCCTGTG
TCGATAAATTAACATGGATAGGATGTAGTG--------------------------------------------------
----------------------------------------------------------------CTATATATTTGCAAGT
TGCAAAGCTTGTGATGAATGAAACCAATACAACAGTAGCAAGACCAAAGTATGAGAGTGAGAGATCAAGGAAGGATCAAA
AACCGGTGAGAACGACAAGTGTTTAGCTTTCCATAATGCGGGTGAACTACAAGGGGAAAATATATAGTGCATTCCACTTT
TCTTTATGAAATTTAATGATTATTATTTTGAAATTTGCCTTCCACTTGATGATGTCATGAGTTCAACTTGTATGTAGTGC
TTTGTGATTGCTAATGTATCGTCTACTTCGTTGATGCCGACTTACGTACCTACCAGCTGCTTTTCTTGGGCAGCTAAGTC
GCCCATAGCATGCTATAG-TTTTGCAATGTTGTATCGAACAAGGTTCGACATATGTATCTAGCAATTTTGGCATATGAAT
GTAGCATCA-----AGATCTCACAACATATCCTATTCACTGAGATGCTTGTGGG-ATATGTTCCCAAGAATCTTGAGCAA
AAGCACAGTAACATGTGCATGCATGCCGCAAAACAAATCTATGCATGCATGCTTTTTCACAA---TATATAAATTCCATT
GCCATGTGCATGCATAGGTGTGAATGTTTTGTTAATCCAAATGGACAATGAGCTTCAGGAGTTGGTATTGCAGCATGGAA
AC
>SNPs
S-------S--------------------S---S------S--S----S---S-------S--------------S----
--------------------------SS-------------S--------------------S--------------S--
------------SS---S-------S--------------------------S----------------S----------
-------------------------------S-------------------S------S---------------------
--------SS---------------------SSS--------------------------------S-----S---S---
S---------------S------------------------------------------S-------SS-----SS----
-----------------------------------S--------------------S------S----------------
----SS--------------S--------------------------------------S---SS---------------
----------------S------------------------SSSSSSSSSSSSSSSSS-------------S--------
--------------------S----------S----SS----------------S-------------------------
-------------------------------------------S-S----------------------------------
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-S---------------------------------------------------------S--------------------
--------------S----------------------------------------------------S------------
-----------------------------------------S----------------------S--S------------
---------------S--------------SSSS----------------------------------------------
---------------------S----------------------------------------------------------
-----------------------------S--------------------------------------------------
-------------------------------------------------------------S---S---S----S---S-
--------------------------------------------------------------S-S---------------
---------------------------------------------------S----------------------------
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----------------SSS------------------------SS----------------------------S------
------------------------S-------------------------------------------------------
-----------------------S-SS--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------
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S---------S-------------S-------------------S-----------------------------------
------S-------------------------------------------------------------------------
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--S----------------------------------------------------------S------------------
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---------------------------S----------------------------------SSS---------------
----S-------SS-----------------------S---S---S-----S----------------------------
--
>forward_49
-----------------------------GACCAGTCCACAGACATGGG-------------------------------
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--
>reverse_1055
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--------------CTTGCCAGCTTCCACTTCCT----------------------------------------------
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>forward_417
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-----------------------------------------------------------------------------CCG
CCAGGGTCAAAATTTCC---------------------------------------------------------------
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--
>reverse_2185
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------------------------GGCTTTCCATAATGCGGGTG------------------------------------
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--
