>input_sequence_72723
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-----------------------------------------------------------ATGTCGAGCGTGCGCCTGAGC
CTGCAGCGCGGGTGCACGGCGGCAGAGGACGCGTACCTTGAGCGGCTCGCGAGGGAGAAGGGCTTCGGCAACTCCTCGAT
GTC---------------------------------TCGATTCGGCCGAGGAGGTAGATCGATGTCCACCATGCGC----
--------CTGAGGCTGAGGCTGCTGTGGACAGCCGAGGAAGACGCGCGCCTGGAGCGGCTCGCGAGGGAAAACGGCTTC
CGCCACTGGAGCCGGGTGGCGCGCCGGATGCCGGGCCGCTCCCGCAGCCTCTGCCTCGCCCGGTGGCGTCACCTATCGGC
GGAGCGCGAGGTGTGCTACCTCCACACCGCCCTCGCCGCACTCTCCCACCGCGACGAGGACGAGCTCCTCAGCCGCGACT
GGATGCGCCGCTGGACGGCCTACAGAAAGAAGGCCGCCAAGAGCAGCCCGGAGAAGGCCCAAGAATACTGGACGGAGTTC
ATGAAGAACGCCGCTACGGGTTTCTTGGAGGAGGGGGTCCAGTC------------------------GGGGCCGGAGCC
GGCTTCCCCGGCGCCGATGCAGGAACAGCAACAGCACCCTCTCGCCGACGTCCTTGCCTCGGGCTTGAGCTCTTGCAGCC
TCGCACCGGTAGATCCCAGGGCTGGCAGCCTCGCGCTCGGGCTTGCGCGCATGACCATCTGA------------------
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>chr6A_1_TraesCS6A01G346900
AGCATAGCACGGTCGACCCGCAGCCTTGCAGTGGTGGGAGCCGCGCTCATGCATACTACCATCCGGAGGATCCGACAGAC
CTCGTCGGAACAGTGGATGTGGCGGCGTGGGGGCTTGCCGGTTTAGTGCGTGGGGTGACGTCATCATCGGGGGATGCAGC
ATGAGAGAGGCAATGGAGCGACTGAGAGACATAGAAGATGAAAGGATAATGCAGGGCACCCCCCGTGTGGGGCTCACATG
CTACGTGTCGCATGCCCACGGTGGGATGATGCACCGTGCGACGGGACGATCAAATTGAGTGGATCCGTCAACCTAACAGG
AACATTCACATATCAAATTTGGTAGATCTATGGTGGGTGTACCGCTGGCTACACCCTACACTATAATGTGTGTAACAGCT
TGTGCTAACTGATTGCAAGTTGC-ACCTGCCTGTTATTTTCAGGACTAAAACTACGTCGATTTCCCATAAAGAAAAAGCT
GCGGTCATGATTGAAAAAAAAA---TTGTGGGAAACTTTAAGCTTTATTCAAATGGCATCGGCATCGACATGATTAGCCA
TCACGCTGGTCATGAAGAAACCAGGCGGGGAGTCCATCCAACAGTCGGTAACCCCAAGTATGTTTGCATGTTTCGCACAC
AAGTGGGCCGGCAGGTTGAAAAATAAAGACATGAAGCCATATCGAGCTACACGTATTCACATGCCCAAACTTGTGTACTT
GTGCAAACTCGGACTCGTCGGTCGGTTGCTCGCCTGCGCGCTCGTAATTAAGGTGCGTGAGCGACAGAACCGTGTCCGAG
TTCGAAATCGACTTGGCAACGGCGTTCACGTACCCATATG--GTTATGGACTCGCGGGCAAATCGACCGATCGATCGTCA
TTGG------------GCCGCTACCAAGTCCTCGAGCTCAGCTTCCGGGCCGACG-CCACGCGCAGGTCTCGATCGATTT
CGCCGGCGATCGAGCGGAGACATCGCCGCCGTCGGCCGAGGAGATCGATCGATCGATCGATGTCGAGCGTGCGCCTGAGC
CTGCAGCGCGGGTGCACGGCGGCAGAGGACGCGTACCTTGAGCGGCTCGCGAGGGAGAAGGGCTTCGGCAACTCCTCGAT
GTC---------------------------------TCGATTCGGCCGAGGAGGTAGATCGATGTCCACCATGCGC----
--------CTGAGGCTGAGGCTGCTGTGGACAGCCGAGGAAGACGCGCGCCTGGAGCGGCTCGCGAGGGAAAACGGCTTC
CGCCACTGGAGCCGGGTGGCGCGCCGGATGCCGGGCCGCTCCCGCAGCCTCTGCCTCGCCCGGTGGCGTCACCTATCGGC
GGAGCGCGAGGTGTGCTACCTCCACACCGCCCTCGCCGCACTCTCCCACCGCGACGAGGACGAGCTCCTCAGCCGCGACT
GGATGCGCCGCTGGACGGCCTACAGAAAGAAGGCCGCCAAGAGCAGCCCGGAGAAGGCCCAAGAATACTGGACGGAGTTC
ATGAAGAACGCCGCTACGGGTTTCTTGGAGGAGGGGGTCCAGTC------------------------GGGGCCGGAGCC
GGCTTCCCCGGCGCCGATGCAGGAACAGCAACAGCACCCTCTCGCCGACGTCCTTGCCTCGGGCTTGAGCTCTTGCAGCC
TCGCACCGGTAGATCCCAGGGCTGGCAGCCTCGCGCTCGGGCTTGCGCGCATGACCATCTGACATCTGAGGCGACCAAAG
AAGACGTGCCCCTCTACGAAGCTTTGCGCATGTGTAGCCAGTCTCCTTTCGATCGGGTTACATCAATGAATTTGTCTTTT
TGAAGACGTCGTACGTTGATGTGGTTGTGCTTCAACATTTGTTTTTCTTTCTGATGAAACTTGCAACTGAGAGGTAAGTA
CACTAGTAATGCCCAAAGCGGATTCTGGGCAGATCCATGGCTACTCGTAGCTACTCTACTTTCGATCGTGTTCCATCAAT
GAATTTGTCTTTTGACGACGTACGATTCATGTGGTTCTGGTGCAATATTTATTTACTTTCTGAATGTGAGAGGTGAATAC
ACTAACAATGCCTAAATTTAGCTTGCATGTTCACGTCATTGCTTGAAATTGAAAAATAAAAAATTCTGATGCAAACACTA
GCATGCCTAAGGGGTTGTTTGGTTTGTAACTAACTTTGCCAAAGATTGCCACATCTAAGGTTAGGCAAATTTGACCAACT
TAGGTGAGTGTTTGGTTCAAACCACACCTTAGGCAAGCCATACTTGAACCACACATGGCATACACACAAAAAGTATGGCA
AAATTCTTTTAGGCTTGCCAATTTGTGGCTCTCATTTTGATGAACTAACCTTAATCAAGTTTGGCAAAAATGTGTGACAA
AGTATGGCAATGCTAGTCCTAAAACCAAAACAGTCCCTAAATTTCTGGATGCCGAACTGTGCAATACAATGCACGTCCGT
TTGTGGCCGTCAAATCGTCTGCTTTGTGGCCGGCCGTATGTAACCGCCAACCCCACCCCGCAAAAAAAACGTCACTGCAC
CAGCGAGGCACCGGGCCCATGCTGTCTCTATGTACTACTACTGTATATCCTTATGCAATATGGATCCCACTTGTCTCAAT
TTATATTTTTTCCTTTATTTTTAAATTTCTTGTTTTATCACCTTTGTGAACTTTTCAGAATTTTCACGGACTTTTTCCAA
ATTAGATTATTTAGTTTTTTAT
>chr6D_6
-----AGCACGGTCGACCTGCCGCCTTGCAGTGGTAGGAGCCGCGCTCGTGCATACTACCATCCGGAGGAGCCGACAGAC
CTCGTCGGAACAGTGGATGCGGCGGCGTAGGGGCTTGCCGGTTTAGTGCGTGGGGTGACGTCATCATCG-GGGATGCCGC
ATGAGAGAGACGATGGAGCAATTGGGAGAGATAGAAGATGAAAGGATAATGCAGGGCGCCCTCCGTGTGGGGCTCACATG
CTAT-TGTCGCATGCCCACGGTGGGAGGATGCACCGTGTGACGGACCGATCGAATCGAGTGGATCCGTCAACCTAATAGG
AATATTCACATATCAAA-TTGGTAGATCTATGGTGGGTGTACTGCTGGCTACACTCTACACTATAATGTGTGTAACAGCT
TGTGCTAACTGATTGCAAGTTGCAACCTGCCTGTTATTTTCAGGACTAAAACTACGTTGATTTCCCGCGAAGAAAAAGCT
GCCATCATGATTGAAAAATATTTTTTTGCGGGAAACTTTGAGCTTTATTCAAACGGCATCGGC-------------GCCA
ACACGATGGTCACGA------------------CCATCAAACAGTTGGTAACCTCAAGTGTGTTTGCATGTTTCCCACAC
AAGTGGGCTGGCAGGTTGAAAAATAA-GACATGAAGCCATGACGAGCTACACGTATTCACGTGCCTCCACTA-TGTACTT
GTGCAAACTCGGACTCGTCGGTCGGTTGCTCGCCTGCGCGCTCGTAATTAAGGTGCGTGAGCGACAGAACCGTGTCCGAA
TTCGAAATCGACTTGGCAACGGCGTTCACGTATCCATATG--GTTATGGACTCGCGCGCAAATCGACCGATCGATCGTCA
TTGG------------GCTGCTACCAAGTCCTCGTGCTCAGCTTCTGGGCCGGTGCCCACGCGCAGGTC----TCGATTT
CGCCGGCGA----GCGGAGACA---CCGCCGTCGGCCGAGGAGATCGATCGATCA----ATGTCGAGCGTGCGCCTGAGG
CTGCAGCGCGGGTGCACGGCGGCAGAGGACGCGTACCTTGAGCGGCTCGCGAGGGAGAACGGCCTCGGCAACTCCTCGAT
GTC---------------------------------TCGATTCGGCCGAGGAGGTAGATCGATGTCCACCGTGCGC----
--------CTGAGGCTG------CTGTGGACGGCCGAGGAAGACGCGCGCCTGGAGCGGCTCGCGAGGGAGAACGGCTTC
CGCCACTGGCGCCGGGTGGCACGCCGGATGCCGGGCCGCTCCCGCAGCCTCTGCCGCGCCCGGTGGCGTCACCTGTCGGC
GGAGCGCGAGGTGTGCTACCTCCACACCGCCCTCGCCGCACTCTCCCACCGCGACGAGGACGAGCTCCTCGGCCGCGACT
GGATGCGCAGCTGGACGGCCTTCAGAAAGAAGGCCGCCAAGAGCAGCCCAGAGAAGGCCCAAGAATACTGGACGGAGTTC
ATGAAGAACGCCGCTACGGGGTTCGCGGAGGAGGGGCACTGCCGGCCGGCGCCGCTGCCTGATGTAGTGGAGTCGGAGCC
AGCTTCCCCGGGGCCGATGCAGCAG------CAACACCCTCTCGCCGACGTCCTTGCCTCGAGCTTGAGCTCTTGCAGCC
TTGCACCGGTAGATCCCAGGGCTGGCAGCCTCGCGGTAGAATTCGCGCGCATGACCATCTGACATCTGAGGCAGCCAGAG
AAGACGTGCCCCTCTACGAAGCTTTGCGCATGTGTAGCTAGTCTCCTTTCGATCGGGTTACATCAATGAATTTGTCTTT-
TGACGACGTCGTACGTTGATGTGGCTGTGGTG------------------------------------------------
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>chr6B_773
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--------------------------------------------------------GTGAGAAACAGAATCGGGTCCGAT
TTCGAAATCGACTTCGCAATGGTGTTCACGTACCCATATATAGTTATGGACTCGCGCGCACAACGGCCAATCGATCGTCA
TTGTGGGTCGCACATAGCTGCTACCAAGTCCTC---------------------------GCGCAGGTCTAGATCGATTT
CGCCGGCGA----GCGGAGACATCAACGCCGTCGGCCGAGGA----GATCGATCGATCGATGCCGAGCGTGCGCCTGAGC
CTGCAGCGCGGGTGCACGGCGGCAGAGGACGCGTACCTTGAGCGGCTCGCGAGGGAGAAGGGCCTCGGCAACTCCTCGAT
GTCCGCCTCCTCGTCGGCGCGCACGCACTACAGGTCTCGATTCAGCCTAGGAGGTAGACCATCAATTCGACGGCGCGCGC
ACGCACTGCTGCTGCTT------CAGTGGACGGTGGAGGAGGACGCGCGCCTGGAGCGACTCGCGAGGGAGAACAGATTC
CGCCACTGGCGCCGGGTGGCGCGCCGGATGCCGGGCCGCTCCCGCAGCCTCTGCCGCGCCCGGTGGCGTCACCTATTGGC
GAAGCGCGAGGTGTGCTACCTCCACACTGCCCTCGCCGCACTCTCCCACCGCGACGAGGACGAGCTCCTCAGCCGCGACT
GGATGCGCCGCTGGACGGCCTACAGAAAGAAGGCCGCCAAGAGCAGCCCGGAGAAGGCCCAAGAATACTGGAGGGAGTTC
ATGAAAAACGCCGCTACGGGTTTCGCGGAGGAGAAGGTACAGTC------------------------GGAGCCGGAGCC
GGCTTCCCCGGCGCCGATGCAGCGG------CAGCACCCTCTCGCCGACGTCCTTGCCTCGGGCTTGAGCTCTTGCAGCC
TTGCACCAGTAGATCCCAGGGCTGGCAGCCTCGCGTTAGGGCTCGCGCGCATGACCATCTGACATCTGAGGCAGCCAGAG
AAGACGTGCCCCCCTACGAAGCTTTGCGCATGTGTAGCTAGTCTACTTTCGATCGTGTTCCATCAATGAATTTGTCTTT-
TGACGTCGTATATAC-----------------------------------------------------------------
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-------------------------TTCATGTGGTTGTGGTGCAACATTTATTTACGTTCTGAATGCGAGAGGTGAATAC
ACGAACAATGCCTAAATTTAGCTTGCATGTACATGTCATTGCTTGAAATTGAAAAATAAAAAATTCTGATGCAAACACTA
GCATG---------------------------------------------------------------------------
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-----------------------------------CCTAAATTTCTGGATGCCGAACTGTGCAATACAGTGCACTTCCGC
TTGTGGACGTCAAAGCGT--------------------------------------------------------CTGCAC
CAGCGAGGCACCGGGCCCATGCTGTCTCTATGTACTACTACTGTATATCCTTATGCAATATGGATCCCACCTATCTCAAT
TTATATTTTTCCTT------------------------------------------------------------------
----------------------
>SNPs
SSSSS-------------S--S-------------S------------S---------------------S---------
-------------------S--------S----------------------------------------S-------S--
---------S-S-------S-S--S----S---------------------------S---S------------------
---SS---------------------S-----------S-----SS-----S---S--------------------S---
--S--------------S------------------------S-----------S-------------------------
---------------------------------------------------------S--------SSS-----------
--SS--------------S-SS------S----------S-------------S---------SSSSSSSSSSSSS----
S----S------S--SSSSSSSSSSSSSSSSSS-----S------S-------S-----S--------------S-----
--------S-----------------S-------------SS------------------S----SSS---SS-------
-------------------------------------------------------------------------------S
--------------------------------------------------------S-----------------------
------------------S---------------S----------S------SS----------------S---------
---------SSSS-----------S-------------------------------------------------------
---------------------------------------------------------------S----------------
----------------------------------------------------------------------S---------
-----------------SSSSSS--------S--------------------------------------S---------
---------S---------------------------------------------S------------------------
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------------------------SS--------------------------------------------S---------
----------------------S-SSSSSSS-------------------------------------------------
-S---------------------------------S-S-----S----------------------------SS---S--
--------------------------------------S----------------------------------------S
---S--------------------S----S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSS-----------S--------S----------S---------S-------------
--S---------------------------S--S----------------------------------------------
-----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------------------S-----S----S
------S-------S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------
----------------------------------------------------------------------S-S-------
----------S-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSS
>forward_180
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ATGAGAGAGGCAATGGAGCG------------------------------------------------------------
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>reverse_1947
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--------------------------GGGCAGATCCATGGCTACTC----------------------------------
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