>input_sequence_72722
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-------------------------------------------------------ATGGACCTCAGTGCCCTCAGCAGCG
ACTACTCGTCAGGGACGCCGTCCCCGGTGGGCGCGGACGGCGGCAACAGCGAGGGCTTCTCGGCGTACATGACGGTGTCT
TCGGCGCCGCCGAAGCGCCGCGCCGGGCGGACCAAGTTCAAGGAGACGCGGCACCCGGTCTACAAGGGCGTGCGCCGGAG
GAACCCCGGGAGGTGGGTCTGCGAGGTGCGGGAGCCGCACAGCAAGCAGAGGATATGGCTCGGCACGTTCGAGACCGCGG
AGATGGCGGCGCGCGCTCACGACGTGGCCGCGCTGGCGCTGCGCGGCCGCGCCGCCTGCCTCAACTTCGCCGACTCGCCT
CGGCGGCTCCGGGTCCCGCCCGTGGGTGCTAGCCCTGATGAGATACGGCGGGCGGCGGTGGAGGCGGCTGAGGCATTCCT
GCCGGCACCCGACCAGAGCAATGCGGCCGCCGAGGAGGTAGCAGTTGCACCAACGGAGCAGTTCGCCGGTGATCCGTACT
ATGGGATGGACGATGGGATGGACTTCGGGATGCAGGGCTACCTCGACATGGCGCAGGGGATGCTCATTGCCCCTCCTCCG
ATGGCAGGCCCTTCAGCGACTGTCGGAGACGGCGACGATGACGGCGAGGTCAGCTTGTGGAGCTACTGA-----------
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>chr6A_1_TraesCS6A01G256900
CGAGGAAAAATAGGACATGGGTGACAATGGCGCCTTGAGCCCCATGCGCCGGCTTGTGTCCCATGCACTACTCTACCTTG
CCGGCGTCCGGACCAACACTCTGGGAGCGCAGCCAGCCGCCGGACATGGGCACGGCGGAACCGGACGAGCTCCGCTTAAA
AATCGGTTTGCGTTGCATGCAATAATATGGATTTCAGGTTTCTAATCTAAGACATCCGGTTTTAGAATCAAATATTTAAG
GCGTGACCGGTCAGTGTCCGCAGACATGCCGTGCGTGTCCGCGGGCGTTTAAGGGGTTAGATTTGTTAACGGCGTGTTCG
TGGGCGTTTAAGGGGTCAGATTTATTAAGTCGGGCTGTAGATGTTCTCACATGGCCAAAATCTGGAGGGTCTGCTGGAGA
ATGTTAAAAATCTGATCCATGTTAAAAAAAACAGGTCCAAGGTGCCGAGAGTGCCTTTTCCCCCAATGTGAGCCAGCTGA
CATTCCTGAACTTGTAGACTGAAAAGCGTTAACAGTGCAAAAATTCCTATGTAGAGTCGAACTGCTG-------------
--TGCAAATAGAATCAACAACAGTTCTATTCTATTGACAGTAAATTGCATTATCCTACGGGTTCGCGTCAAACTGCCCGC
CTTGAGGACAAGCTGTCACGGCGAGCTTTCTCTTTCAAGGCACGTTGCTGTCACAAGAGAGCCCCGTTGCCCAGGAGCAC
AGTAGAGTGGCCCACATCCGTCCCATGCCTGCGCGTCGCGTGGGTCCCCATCCGCACCCCCGCGAGCTCCAGCTGGTTCC
GACCCACTTAACGCCCCCGAGCCCAACACTCTCCCGACCCAGCAAGTCGCGCTACCTGGCTGGCGCCTCCGGTGCCGCAC
CGCGTTGAGCCGTGCACGCGGGGACGTCGCGCTCCACGCGCTAAACTATATAAACCGCCACCTTTCCCTCCCAAATCCAA
ACTACCTGCTTCCACTTCCTCCCCCAGCTTACACTCGCAGCCAGCATAGCCGGCCATGGACCTCAGTGCCCTCAGCAGCG
ACTACTCGTCAGGGACGCCGTCCCCGGTGGGCGCGGACGGCGGCAACAGCGAGGGCTTCTCGGCGTACATGACGGTGTCT
TCGGCGCCGCCGAAGCGCCGCGCCGGGCGGACCAAGTTCAAGGAGACGCGGCACCCGGTCTACAAGGGCGTGCGCCGGAG
GAACCCCGGGAGGTGGGTCTGCGAGGTGCGGGAGCCGCACAGCAAGCAGAGGATATGGCTCGGCACGTTCGAGACCGCGG
AGATGGCGGCGCGCGCTCACGACGTGGCCGCGCTGGCGCTGCGCGGCCGCGCCGCCTGCCTCAACTTCGCCGACTCGCCT
CGGCGGCTCCGGGTCCCGCCCGTGGGTGCTAGCCCTGATGAGATACGGCGGGCGGCGGTGGAGGCGGCTGAGGCATTCCT
GCCGGCACCCGACCAGAGCAATGCGGCCGCCGAGGAGGTAGCAGTTGCACCAACGGAGCAGTTCGCCGGTGATCCGTACT
ATGGGATGGACGATGGGATGGACTTCGGGATGCAGGGCTACCTCGACATGGCGCAGGGGATGCTCATTGCCCCTCCTCCG
ATGGCAGGCCCTTCAGCGACTGTCGGAGACGGCGACGATGACGGCGAGGTCAGCTTGTGGAGCTACTGATTACGCGCATT
TGAGTTA-----------------CGAAGAACTTCTAATGCATGTGCAGCTTTATATAGCAATCCAGTACAGGAAGTGTA
CTGCATGGTTGCCCTTCCATTTTCTC--TTCTGAACTTCTCTGGGTAATGTATGGTTGCTCTCTGATGAATTGCGATCAG
AAGAAGCAGAAGGTCTGATCTTGTGTTTGGTAAATGGTGCACGCTTGTCGGGTTATGGCTTGTTAGTGTTTTAACTCCGA
AGGAGTGTTGGGGCTAGCTATATGTATCTCCCTTGTTTATTAACCATGAGAGGAGTGTCTTCGTCGGTGTTTGGTTAAGC
AAAGTGTAATTTTCTTGATGTATAATTAGCAGTAGCATGCTGCTAGAGCATC----TCTAACCGATCCCTTGTAAAGCTT
AATTCCTTGCAAAGTTTTAGAGGAGTAAAAAACATGA-TTCCTCCTTTAAACCGCACCTAACCGATCCCGTGTACTGTAA
CATTTAAGAGTACAACCTTGGAAGTGCTAAAAATCTGACGTTAAATTTTTAGGCATGGCAAATCAAACATTTTTCATGGT
AATTTATATTGGCATAAGGATGACAAATTTAGTTGACAAGCACGACACTTTCTTGGCAAAAAAATTGTT-----CGGATG
TGCCATGCATGTCAACTAAACTTGCTACTCTTGGCAAGCATAGAAAATGTTAGATTTGTCATG-CTAAAAATCTGACGTT
TGCTAGATATTCGAGTCCTAATTTTTTTACTCCACTGCACGCTTGACTCTTAAATATACTTGGCCGCCCCCGCTGGAGTA
ATAAAATTTCCCCTCACGCCGCTCGATCTCATCCATTCAGCCGCCGCTTGAGCACTCTGCATCTTGCCGGCATGCCCCCA
CATCCACTCCGGCGCGCCCCGCCGCCCAAATGACTAGGTCCCCGCTGTCGATTAGAAGCACCACTCGACGCTCTCGAGCC
CGAGGTCGCGACAACACGTCCTCCTCCCGGTTCCTTGACCTGCCACCACTGCCGACGTC
>chr6D_465
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----------------------------------------------------------------AATGTGAGCCAACTGA
CATTCCTGAACTTGTAGACTGAAAACCGTTAACAGTGCAAAAATTCCTATGTAGAGTCGAACTGCTGCTACCTTACAATG
TATGCAAATAGAATCAACAGA---TCCATTTTATTGACAGTAAATTGCACTATCCTACGGGTTCTTGTCAAACTGCCCGC
CTTGAGGGCAAGCTGTCACGCCGCGCTTTCTCTTTCAAGGTGCGTTGCTGTCACAAGAGAGCCCCGTTGCCCAGGAGGAC
AGCAGAGTGGCCCACATCCGTCCCATGCCTGCGCGTCGCGTGGGTCCCCATCCGCACCCCCGCGAGCTCCAGCTGGTTCC
GATCCACTGAACGCCCCCGAGCCCAACACTCTCCCGACCCAGCAAGTCGCGCTACCTGGCTGGCGCCTCCGGTGCCGCAC
CGCGTTGAGCCGTGCACGCGGGGACGTCGCGCTCCACGCGCTAAACTATATAAACCGCCACCTTTCCCTCCCAAATCCAA
ACCACCTGCTTCCACTCCCTCCCCCAGCTTACACTCGCAGCTACCATAGCCGGCCATGGACCTCAGTGCCCTCAGCAGCG
ACTACTCGTCGGGGACGCCGTCCCCGGTGGGCGCGGACGGCGGCAACAGCGAGGGCTTCTCGACGTACATGACGGTGTCT
TCGGCTCCGCCGAAGCGCCGCGCCGGGCGGACCAAGTTCAAGGAGACGCGGCACCCGGTCTACAAGGGCGTGCGCCGGAG
GAACCCCGGGAGGTGGGTCTGCGAGGTGCGGGAGCCGCACAGCAAGCAGAGGATATGGCTCGGCACGTTTGAGACCGCAG
AGATGGCGGCACGCGCGCACGACGTGGCCGCGCTGGCGCTGCGCGGCCGCGCCGCCTGCCTGAACTTCGCCGACTCGCCT
CGGCGGCTCCGGGTCCCGCCCGTGGGTGCTAGCCCTGATGAGATACGGCGGGCCGCGGTAGAGGCGGCTGAGGCATTCCT
GCCGGCACCCGTCCAGAGCAATGCGGCCGCCGAGGAGGCAGCCGTTGCACCAACGGAGCAGTTCGCCGGTGACCCGTACT
ATGGAATGGACGATGGGATGGACTTCGGGATGCAGGGCTACCTCGACATGGCGCAGGGGATGCTCATTGCCCCTCCTCCG
ATGGCGGGCCCGTCAGCGACTGTCGGAGAGGGCGACGATGACGGCGAGGTCAGCTTGTGGAGCTACTGATTACGCGCATT
TGAGTTATGTCTTGTGTGGGGGCGCGAAGAACTTCTAATGGACGTGCAGCTTTATATTGCAATCCAGTACAGGAAGTGTA
CTGCATGGTTGCCCTTCCATTTTCTCTTTTCTGAACTTCTCTGGGTAATGTATGTTTGCTCTCTGATGAACTGCGATCAG
AAGAAGCAGAAGGTCTGATCTTGAGTTTGGTAGATGGTGCACGCTTGTCGGGTTATGGCTTGTGAGTGTTCGAACTCCGA
AGGAGTGTTGGGGCTAGCTATATGTATCTCCCTTGTTTATTAAGCATGAGAGGAGTGTCTTCGTCGGTGTTTGGTTAAGC
AAAGTGTAATTTTCTTGGTGTATAATTAGCAGCAGCATGCTGCTAGAGGATC----TCTAACCGATCCCTTACAAAGCTT
AATTCGTTGCAAAGTTTTAGAGGAGTAAAAAACCGGATTTTCTCCTTCAAACCGCACCTAACCGATCCCTTGTAACATTT
------AGAGTACAACTTTGGAAGTGCTAAAAGTCTGACGTTAAACTTTTAGGCATGACAAATCAAACATTTTTCATGGC
AATTTATGTCGACGCAAGGATGACAAATTTAGTTGGCGAGCACGACACTTTCCTGGCAAAAAAATGTTGTGAGCCGGATT
TGCCATGCTTGTCAACTTAACTTGCCACCCTTGGTAAACATAGAAAATGTTCAATTTGTCATACCTAAAAATCCGACGTT
CGCTAGATAGTCAGGTCCTAA-----------------------------------------------------------
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>chr6B_465
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----------------------------------------------------------------AATGTGAGCCAACTGA
CATTCCTGAACTTGTAGACTGAAAACCGTTAACAGTGCAAAAATTCCTATGTAGAGTCGAACTGCTGCTACCTTACAATG
TATGCAAATAGAATCAACAGA---TCCATTTTATTGACAGTAAATTGCACTATCCTACGGGTTCTTGTCAAACTGCCCGC
CTTGAGGGCAAGCTGTCACGCCGAGCTTTCTCTTTCAAGGCGCGTTGCTGTCACAAGAGAGCCCCGTTGCCCAGGAGGAC
AGCAGAGTGGCCCACATCCGTCCCATGCCTGCGCGTCGCGTGGGTCCCCATCCGCACCCCCGCGAGCTCCAGCTGGTTCC
GATCCACTGAACGCCCCCGAGCCCAACACTCTCCCGACCCAGCAAGTCGCGCTACCTGGCTGGCGCCTCCGGTGCCGCAC
CGCGTTGAGCCGTGCACGCGGGGACGTCGCGCTCCACGCGCTAAACTATATAAACCGCCACCTTTCCCTCCCAAATCCAA
ACCACCTGCTTCCACTCCCACCCCCAGCTTACACTCGCAGCTAGCATAGCCGGCCATGGACCTCAGTGCCCTCAGCAGCG
ACTACTCGTCGGGGACGCCGTCCCCGGTGGGCGCGGACGGCGGCAACAGCGAGGGCTTCTCGACGTACATGACGGTGTCT
TCGGCTCCGCCGAAGCGCCGCGCCGGGCGGACCAAGTTCAAGGAGACGCGGCACCCGGTCTACAAGGGCGTGCGCCGGAG
GAACCCCGGGAGGTGGGTCTGCGAGGTGCGGGAGCCGCACAGCAAGCAGAGGATATGGCTCGGCACGTTCGAGACCGCAG
AGATGGCGGCGCGCGCGCACGACGTGGCCGCGCTGGCGCTGCGCGGCCGCGCCGCCTGCCTCAACTTCGCCGACTCGCCT
CGGCGGCTCCGGGTCCCGCCCGTGGGTGCTAGCCCTGATGAAATACGGCGGGCGGCGGTAGAGGCGGCTGAGGCATTCCT
GCCGGCACCCGACCAGAGCAATGCGGCCGCCGAGGAGGCAGCCGTTGCACCATCGGAGCAGTTCGCCGGTGATCCCTACT
ATGGGATGGACGATGGGATGGACTTCGGGATGCAGGGCTACCTCGACATGGCGCAGGGGATGCTCATTGCCCCTCCTCCG
ATGGCAGGCCCGTCGGCGACTGTCGGTGACGGCGACGATGACGGCGAGGTCAGCTTGTGGAGCTACTGATTACGCGCATT
TGAGTTATGCCTTGT--GGGGGCGCGAAGAACTTCTAATGCATGTGCAGCTTTATATAGCAATCCAGTACAGGAAGTGTA
CTGCATGGTTGCCGTTCCACTTTCTCTTTTCTGAACTTCTCTGGGTAATGTATGTTTGCTCTCTGATGAACTGCGATCAG
AAGAAGCAGAAGGTCTGATCTTGAGTTTGGTAAATGGTGCACGCTTGTCGGGTTATGGATTGTGAGTGTTCGAACTCCGA
AGGAGTGTTGGGGCTAGCTATATGTATCTCCCTTGTTTATTAAGCATGAGAGGAGTGTCTTCGTCGGTGTTTGGTTAAGC
AAAGTGTGATTTTCTTGGTGTATAATTAGCAGTAGCATGCTGTAGAGCATCTCTAATCTAACCGATCCCTTATAAAGCTT
AATTCCTTGCAAAGTTTTAGAGGAGTAAAAAACCAGGTTTTCTCCTTAAAACTGCACCTAACCGATCCCTTGTAACATTT
------AGAGTACAACTTTGGAAGTGCTAAAAATATGACGTTAAATTTTTAG----------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------S----
-------------------------S------------------------------------------------------
-------------------SSSSS--S---S------------------S--------------SS--------------
-------S------------S--------------------S-----------------------------------S--
--S-----------------------------------------------------------------------------
--S-----S-----------------------------------------------------------------------
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--S-------------S------------------------S--------------------------------------
----------S---------------------------------------------------S-----------------
-----S--------------------------------------------------------------------------
------------------------------------------------------------------------------S-
----------------S---------------------------------------------------------------
-----------------------------------------------------------S--------------------
--------------------------------------S---S-------------------------------------
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-----------S--------------------------------------------------------------------
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------------------------------------------------------S---------------S---------
-----------------------S---------------------------------------S------SS--------
-------------------------------------------S------------------------------------
-----------------S------------------------------S----------------------S--------
---------------------------------SS-----S------S---------------------S----SSS-SS
SSSSSS----------S----------------------------------------S---------------------S
-------S-S-S-SS--------------------S-S--------------S------------SS-S----------S
--------S--------S-------S--S-----S--S-------------SS---------S----------S------
S--------S--SS-------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_332
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------------------------------------------------------------------------CGTGTTCG
TGGGCGTTTAAG--------------------------------------------------------------------
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>reverse_1479
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--------------------------------------TAGCAGTTGCACCAACGGAG----------------------
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>forward_403
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---------------------------------------------------------------GGAGGGTCTGCTGGAGA
ATG-----------------------------------------------------------------------------
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>reverse_2428
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---------------------------TACTCCACTGCACGCTTGAC---------------------------------
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