>input_sequence_72706
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--------------------------------------------------------------------ATGGGCGCCACC
GTCTTTCCCCACTCACTGGCCTCGCGCGGACCCGCCGCCGCCCTCCCCCGAGCCTGCGCGTCCTCCAGCATCCGCATCAA
CCCCGCCTGCGTCGCCATCCCCACCGCCACCGCCGCCAACAAACCGAAGCGGCCAGGGTCGTTCGGCTGCGGGGATCCGC
CGGCGAAGCGCGTGCCCGGTGTTTCCGGCGAGGCCGAGCCCGATGCCAGGACCAAGAAGAGCCCGCGTCCCTGCCCCGTC
AGCGACAAGGATCCGCGGAGCTCGCTGCCCTACGGCGTCCAGGCCTCCCGCGTGACCAAGAACCAGAGCAGCGCCTCGCC
GACTCGTCCTTCCGAGCTCACGGCGCCACCGAAGCCCCAGGCCTGCAGCATGCGCGAGCTCCTCAAGAAGGCCCGGCTTG
CCAAGAACCCGGGCAGCGCCTCGCCGCCGAAGCCCCCGGCCAGCAGCGTGGGCGAGCTCCTCGAGAAGACCGGTCTCGCC
AAGGTTAGTC---CTACTGCTGCCGATGCTGAGGCTCAGCCTGAGGCCATCCACCGGCGCGAGATCGAGCGGCGGAGGGC
CGAGGCCCGCCGGGAGGTGGATCAGATGGTTCGGACGGTGGAGTTCAACGATCCATTCATCGATCCCCAGGACGTGCTCA
AGTGA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------
>chr3B_1_TraesCS3B01G429300
TTTTTTTCACGAAAAAAACCGGGCGAAAAAAACTGAACGAAAAACCC-------------GAACTGGGAGCAC-GGTTTT
TTCCCTTTCCGAAAGGGGCACA--CCCGTGCCTATGA-GAAATCACAACCGTGCCTCTCGCGGAAGCAAAA-TCATGACT
CTCGCAAAAGAAAAAATAAATAGAAAACAC--G-TTTTTTTCGTTTCCGAGGAGGCACGGCCGTGACTCTCGCGG-----
-----------------AAGCAAAACCATGCCTCTCATGAAAGAAAAAAAAACAGAAAATATG--TTTTTTCCGTTTCC-
-AAGAGGCACGGCCGTGACTCTCGCGAAAGCACAACCGTGCCTCTCGCGGAATCAAAACCGTGCCTCTCGCGAAAGGAA-
AAAAAAC-AGAAAACGCATAATTTGTTC-CGTTTCC--AAGAGGCACGGCCGTGCCTCTCGCGAAAGCACAACCGTGCCT
CTCGCGGAAACAAAATCGTGACTCTCGCGAAAGGAAAA-AACACGTCTT-TTTGCGCAAAAAAAAATTTCGCCG-----A
AAAC-TTTTTTTGTTCGAAAAGCTAGGGAAAACCAGTGGAAACATCGA-----AAAAAACC-----GGGAAA--AATTGT
TTAAAAAGCCGGAAATGCGTGCGGAAAAAT-------AAAACAAAA--------ATCGGAGGGAGCGCCCAGAGCGCGAC
ACGTGACGAATTGCTGAGAGCGCGTCAAGTGACGCTGATCGTTGCGAGGCTTCTGAAGGAGCGCTCGTTAATTAGTTGCT
CCCTCCATAAACGGGGAATTTACACACGTGGTACCAATATCGCAGGCCTTACCAAACCCTCAAAAAAAAAATCGTACTAG
TACATTGCACTTTGCAAACCCAAATACCCCAATCCCTCCCTC---AAAAAATATCCCTCGCGCGGTCACTTGGATTTCGG
AGT-----TGAATCCGCTCGCGCGTCTTCTT-GCCGCCCCCCGCGAC---TCTCCCCTCTTTCCCCGCCCGCGCTTCCCT
CTTCTTGCTCCCGATCGGTTTCCGTGGTCTCGTCTCGCGCGC---------CCCGATCTGCTCCGGCCATGGGCGCCACC
GTCTTTCCCCACTCACTGGCCTCGCGCGGACCCGCCGCCGCCCTCCCCCGAGCCTGCGCGTCCTCCAGCATCCGCATCAA
CCCCGCCTGCGTCGCCATCCCCACCGCCACCGCCGCCAACAAACCGAAGCGGCCAGGGTCGTTCGGCTGCGGGGATCCGC
CGGCGAAGCGCGTGCCCGGTGTTTCCGGCGAGGCCGAGCCCGATGCCAGGACCAAGAAGAGCCCGCGTCCCTGCCCCGTC
AGCGACAAGGATCCGCGGAGCTCGCTGCCCTACGGCGTCCAGGCCTCCCGCGTGACCAAGAACCAGAGCAGCGCCTCGCC
GACTCGTCCTTCCGAGCTCACGGCGCCACCGAAGCCCCAGGCCTGCAGCATGCGCGAGCTCCTCAAGAAGGCCCGGCTTG
CCAAGAACCCGGGCAGCGCCTCGCCGCCGAAGCCCCCGGCCAGCAGCGTGGGCGAGCTCCTCGAGAAGACCGGTCTCGCC
AAGGTTAGTC---CTACTGCTGCCGATGCTGAGGCTCAGCCTGAGGCCATCCACCGGCGCGAGATCGAGCGGCGGAGGGC
CGAGGCCCGCCGGGAGGTGGATCAGATGGTTCGGACGGTGGAGTTCAACGATCCATTCATCGATCCCCAGGACGTGCTCA
AGTGAAGCCAGGGATCCATCCATCCATCTCGGGGCAGAGCAATGAACAGAGCAGGATCGATCCCGTCCAACAAGTGAAGA
ATTCAGGCTTGATTATTTAGCCTGAGCATACAAGTGCCATATGTATGTGTAGTGTAGGTGTATGCAGGTTCAGTTAGTCT
-GCAGTTTCATTGTTAGTGCGACTGTGATTCCCCCTTGTAACTAAGTAAATTGGGAAGCACTGTA--ATACATTAGTTGG
TCACTTGATTAATTTAGAGACAAAGTTTGATGATATCGTTCAAATTATTATTTCCTTTGTCTTCAGTCCATGCT--ACTG
ACACTAAAGCAGTCAGCACTGAAAGTTTGAGTGTTTTACTGAAAAAGAAATCTAACACTTGTGAAGAACAGGTACATCAG
TGAGCAATTCCTTAAGGTGGACAAGGCTTTGAGGAATAATGCTTGGGTTAATCACATCGATACCCAGCATGGGACGACGC
TTGCTCACATTCAACAATTTGCCACTCTATGGGAAAAGCTAGCCAATGTCAACATACAACATGGAGTTCGTGATTCTATC
ATCTGGAAGCTCACTAATGCCGGGACTTAGAGCATCTCCAGCCGCGCCCCCAGAACGGCCTCCGCAGGTAATTTTTTCGC
GCCGGCGCCGAAAAAACAACACAGTCGCACCCCCAGGAGCCCGTTTTTCGCCGGCTTGGGCCGAACCCGGCGCGCTGGGG
GGCGCTTGGAGGCGTCGGCCGAAACGTTTTTGGCGCGAAAACCGGCGGGCCCTCCTTGGCAGCGACTCGGCTCTTCTCGC
CGCTTCGTCGTCCTCATCGTCTCGGTTCTCGCGACGAATAAATGCCAAAGCTGCCGCGCGCTGCCGTGCCGGTCAGCCTC
CTCCATTGATGCCTCACGGGCGGCGTAGTGAAGACCGGACGACGCGCGTCCCTCGCCTGCCACGCGTACACACGGCGGCC
ACGCGTACGCGCGGCGCCTCTGCCTATATAAGCCGCCCCAAGCGTGCCGG
>chrUn_1
TTTTTTTCATG---------------AAAAAACCGGACGAAAAAACCCGATGAAAAAACCGAACCGGGAACACGGTTTTT
TTTCCTTTTCGAAAGAGGCACA--CCCATGCCTCTGACGAAATCACAACCTTGCCTCTCGCGGAAA-AAAAACCGTGCCT
CTCGCGAAAT-AAAAAAAAACAGAAAACG----TGTTTTCCTTTTCCGAAAGAGGCACGCCCGTGCCTCACGCGAAGCAC
AACCGTGCCTCTCGCGGAAGCAAAACTGTGCCTCTCGCGAAAGGAAAAAACCCAGAAAACACG-TTTTTTTCCCTTTCCA
AGAGAGGCAGGCCCGTGCCTCTCGCGAAAGCACAACCGTGCCTCTCGCGGAAGCAAAACCGTGCCTCTCGCGAAAGGAA-
AAAAAAC-AGAAAACATG--TTTTTTTTTTGTTTCC--AAGAGGCACGGCCGTGCCTCTCGCGAAAGCAGAACCGTGCCT
CTCGCGAAAACAAAACCGTGCCTCTCGCGAAA---AAAAT--AC-ATTTTTTTGCGCAAAAATATTATTTTTTTCC---A
AAAT-TATTTTTTGTCGAAAAGCTAGGGAAGACCGGTGGAAAACCAAAACATAAAAAA-CC-C--GGAGAAA--AACCGT
TTAAAAAGCCGAAAACGCGTGCGGAAAAAT----AAAAAAACAAAA--------GCCGAAGGGAGCGCCCAGAGCGCGAC
ACGTGGTGAATGGCTGAGAGCGCGCCAAATAACGCTGATCGTTACGAGGCTCCCGAAGAAGCGCTCGTTAATTAGTTGCT
CCC-----------------------------------------------------------------------------
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--------------------------------------------------
>chr4B_1
TTTTTTTCATG---------------AAAAAACCGGACGAAAAAACCCGATGAAAAAACCGAACCGGGAACAC-GGTTTT
TTTCCTTTTCGAAAGAGGCACACCCCCATGCCTCTGACGAAATCACAACCTTGCCTCTCGCGGAAA-AAGAACCGTGCCT
CTCGCGAAAT-AAAAAAAAACAGAAAACG----TGTTTTCCCTTTCCGAAAGAGGCACGCCCGTGCCTCTCGCGAAGCAC
AACCGTGCCTCTCGCGGAAGCAAAACTGTGCCTCTCGCGAAAGGAAAAAACCCAGAAAACACG-TTTTTTTCCCTTTCCA
AGAGAGGCAGGCCCGTGCCTCTCGCGAAAGCACAACCGTGCCTCTCGCGGAAGCAAAACCGTGCCTCTCGCGAAAGGAAT
AAAAAAC-AGAAAACATG--TTTTTTTT-TGTTTCC--AAGAGGCACGGCCGTGCCTCTCGCGAAAGCAGAACCGTGCCT
CTCGCGAAAACAAAACCGTGCCTCTCGCGAAA---AAAAT--ACGTTTT-TTTGCGCAAAAATATTATTTTTTTCC---A
AAAT-TATTTTTTGTCGAAAAGCTAGGGAAGACCGGTGGAAAACCAAAACATAAAAAAA---CCTGGAGAAA--AACCGT
TTAAAAAGCCGAAAACGCGTGCGGAAAAAT----AAAAAAACAAAA--------GCCGAAGGGAGCGCCCAGACCGCGAC
ACGTGGCGAATGGCTGAGAGCGCGCCAAATAACGCTGATCGTTACGAGGCTCCCGAAGAAGCGCTCGTTAATTAGTTGCT
CCC-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------
>chr2B_4
---TTTTCACAAAAAACCGGACG-GAAAAAAACCGAACGAAAAAAAC-------------AAACCGGGAGCAC-GGGTTT
TTCCTTTTCCGAAAGAGGCACG--CCCGTGCCTCTGACGAAATCATAACCGTGCCTCTCACGGAAGCAAAAACCGTGCCT
CTCGCGAAAG-AAAAAAACAGAAAATGCAT--TTTTTTCCCGTTTTCGAGAGAGGCACGGCCGTGACTCTCGCGA-----
-----------------AAGCAAAACCGTGCCTCTCGCGGAAGAAAAAAACATAAAA--CATG-CTTTTTTTCGTTTCC-
-AAGAGGTATGGCCGTGACTCTCGCGAAAGCACAACCGTGCCTCTCGCGAAAG----------------------GAAA-
AAAA---TGGAAAACGCG--TTTTTTTT-CGTTTCC--AAGAGGCACGGCCGTCCCTCTCGCGAAAGCACAACCGTGCCT
CTCGAGAAAACAAAACCGTGACTCACGA-AAA---AAA-T--GT-GTTTCTTTGTGAAAAAAAAATTAAAAAAAA-----
----------TTGGTCGAAAAGCTAGGGAAGACCGGTGAAAAACCAAAACATAAAAAAA---C--GAAAAAC--C-CCAT
TTAAAAAGCCGAAAACGCGTGCGGGGAAAT----AAAAAA-CAAAA--------TCCGGAGGGAGCGCCCAGAGCACGAC
ACGTGGCGAATGGCTGAGAGTGCGCCAAGTGGCGCTAATCGTTGCGAGGCTTCCGAAGGAGCGCTTATTAGTTAGTTGCT
CCC-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------
>chr1B_58
----------------------------------------------------------------------CAC-GTTTTT
TTTCTTTTCCGAAAGAGGCACG--CCCATGCCTCTCGCGAAAGCACAACCATGCCTCTGGCGGAAGC-AAAACCGTGCCT
CTCGCGAAAG-AAAAAAAAACAGAAAACAC--G-TTTTTTCCCTTTTCGAAAGAGG---------------------CAC
AACCGTGCCTCTGGCGGAAGTAAAACCGTGCCTCTCGTGAAAGAAAAAAAAACAGAAAACATG--TTTTTTTCATTTCCG
AAAGACGCACGCCCGTGCCTCTCGCGAAAGCACAACCGTGCCTCTCGCGGAAGCAAAAACGTGCCTCTCGCGGAAGAAA-
AAAA---TAGAAAACACG--TTTTTTTC-CGTTTCC--AAGAGGCACCGCCGTGCCTCTTGCGAAAGCACAACCGTGCCT
CTCACGAAAACAAAATCGTGACTCTCGCGAAA---AAAAT--GC-ATTTTTTTGCGCAAAAAAATTATTTTTTTCG--AA
AAATAA--TTTTGGTCAAAAAGTTAGGGAAGACCGGTAGAAAACCAAAACGTCAAAAAAACCG--AAAAAAA-----CTT
TTAAAAAGCCAAAACCGCGTGCGTAAAAAT----AAAAA----AAA--------TCCAGAGGGAGCGCCCAGAGCGCGAC
ACGTGGCGAATGGCTGTGAGCGTGCCAAGTGGCGCTGATCGTTGCGAGGCTCCCGAAGGAGCGCTCGTTAATTAGTTGCT
CCCGCCTTA-----------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------
>chr2B_58
----------------------------------------------------------------------CAC-GTTCTT
TTCCTTTTCCGAAAAAGGCACG--CGCGTGCCTCTCCCGAAAGCACAACTGTGCCTCTGGCAGAAGC-AAAACCGTGCCT
CTCGCGAAAG-AAAAAAAATAGAAAACGC--GTTTTTTTGCCTTTCCGAAAGAGGCACGCCCGTGCCTCTCGCGG-----
-----------------AAGCACAACCGTGCCTCTCGCGAAAGAAAAAATA-CAAAAAATATGATTTTTTTTCCTTTCCG
AAAGAGGCACGCCCGTGCCTCTTGCGAAAGCACAACCGTGCCTCCCGCGGAAGCAAAACCGTGCCTCTCGCGAAAGAAA-
AAAAA-C-AAAAAATATG-TTTTTTTTC-CGTTTCC--AAGAGGCACGGCCGTGCCTCTCGCGAAAGCACAACCGTGCCT
CTCGCGAAAACAAAATCGTGACTCTCGCGAAA---AAA-T--GC-ATTTTTTTGCGCAAAAAAAATATTTTTTTCG--TA
AACT-TTTTTTTGGTCGAAAAGCTAGGGAAGACCGGTAGAAAACCAAAACGTAAAAAAAACCC--GAAAAGAAAC-CCGT
TTAAAAAGCCAAAAACGCGTGCGTAAAAAT----AAAAA----AAACG---AAATCCGGAGGAATCGCCCAGAGCGCGAC
ACGTGGCGAATGAGTGTGAGCGCGACAATTAACGCTGATCGTTGCGAGCCTCCCGAAGGAGCGCTCGTTAATTAGTTGCT
CCC-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------
>chr6B_63
----------------------------------------------------------------------------TTTT
TTCCTTTTCCGAAAGAGGCACG--CCCGTGCCTCTCACGAAAGCGCAACCGTGCCTTTGGCGGAAGC-AAAATCGTGCCT
CTCGCGAAAG-AAAAAAAAACAGAAAACAC--G-TTTTTTCCTTTTCGAAAGAGGCACGCCCGTGCCTCTCGCGA-----
-----------------AAGCACAACCGTGCCTCACGCGAAAAAACAACAA-CAGAAAACCCG--TTTTTTCCCTTTCCG
AAAGAGGCACGCCCGTGCCTCTCGCGAAAGCACAACCGTGCCTCTCGCGGAAGCAAAACCGTGTCTCTCGTGAAAGAAA-
AAAAAAC-AGAAAACATGTTTTTTTTTT-CGTTTCC--AAGAGGCACGGCCGTGCCTCTCGCGAAAGCACAACCATGCCT
CTCGCGAAAACAAAATCGTGACTCTCGTAAAA---AAA-G--CA-TTCT-TTTGGGCAAAAAAATATTTTTTTCG-----
-AAT-TTTTTTTCGTCGAAAAGCTAGGAAAGACTGGTAGAAAACCAAAACGTAAAAAAAACCC--GAAAAAA--A-CCTT
TTAAAAAACCAAAAACGCGTGCGTAAAAAT----AAAAA----AAAA---AGAATCCGGAGGAAGCGCCCAGAACGCGAC
ACGTGGCGAATGGCTGTGAGCGTGCCAAGTGGCGCTGATCGTTGCGAGGGTCCCGAAGGAGCGCTCGTTAATTAGTTGCC
CCC-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------
>chr6B_63
----------------------------------------------------------------------------TTTT
TTTCTTTTCCGAAAGAGGCACG--CCCGTGCCTCTCGCGAAAGTACAACCGTGCCTCTTGCGGAAGC-AAAACTGTGGCT
CTCGCGAAAG-AAAAAAAAACAAAAAACGC--ATTTTTTTCCTTTTCGAAAGAGGCACGCCCGTGCCTTTCGCAG-----
-----------------AAGCACAATCGTGCCTCTCGCGAAAGAAAATAAAATAAAAAACATG--TTTTTTCCCTTTCCG
AAAGAGGCACGCCCGTGTCTCTCGCGAAAGCACAACCGTGCCTCTCGCGGAAGCAAAACCGTGCCTCTCGCGAAAGAAA-
AAAAAAATAGAAAACACG--TTTTTTTT-CGTTTCC--AAGAGGCACGACCGTGCCTCTCGCGAAAGCACAACCGTGCCT
CCCGCGAAAACAAAACCGTGACTCTCGCGAAA---AAA-A--GC-ATTT-TTTGCGCAAAAAAATTATTATTATTCGAGA
AAAATA--TTTTGGTCGAAAAGCTAGGAAAGACCGGTAGAAAACCAAAACGTCAAAAAAACAC--GAGAAAA--AACCGT
TTAAAAAGCCAAAAACGCGTGCATAAAAAT----AAAAA----AA-T---AAAATCCAAAGGGAGTGCCCAAAGCACGAC
ACGTGACGAATGGTTATGGACGCGCCAAGTGACCCTGATCGTTGCGAGGCTCCCGAAGGAGCGCTCGTTAATTAGTTGCT
TCC-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------
>chr7B_63
----------------------------------------------------------------------------TTTT
TTTCCTTTCCGAAAGAGGCACG--CCCGTGCCTCTGACGAAAGCACAACCGTGCCTCTGGCGGAAGC-AAAACCGTACCT
CTCACGAAAG-AAAGAAAAAACAGAAAACATGTTTTTTTTCTTTTCCGAAAGAGGCACGCCCGTGCCTCTGGCGG-----
-----------------AAGCAAAATCGTGCCTCTCGCGAAAGAAAAAAAAACAGAAAACGCG---TTTTTCCCTTTCCG
AAAGAGGCACGTCCGTGCCTCTCACGAAAGCACAACCGTGCCTCTGGCGGAAGCAAAACCGTGCCTGTCGCGAACGAAA-
AAAAC-C-AGTAAACGCG--GTTCTTTC-CCTTTCTGAAAGAGGCACGCCCGTGCCTCTCGCGAAAGCACAACCGTGCCT
CTGGCGGAAGCAAAATCGTGCCTCTCGCGAAA---AAA-AATGCATTTT-TTTGCCCAAAAAATTTATTTTTTTCA--AA
ATTTATTTTTTTGGTCGAAAAGCTAGGGAAGACCGGTAGAAAACCAAAACGTCAAAAAAAC-C--AAAAAAA--AACCTT
TTAAAAAGCCGAAAACACGTGTGTAAAAATAAAAAATAA----AA-C---AAAATCCGAAGGGAGCGCCCAGAGCACGAC
ATGTTGCGAATGGCTGTGAGCGCGCCAAGTGGCGCTGATCGTTGCGACGCTTCCGAAGGAGCGCTCGTTAATTAGTTGCT
C-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------
>chr2B_112
--------------------------------------------------------------------------------
------------------------------------------------CCGTGCCTCTCGCGAAAG-CACAACCGTGCCT
CTGGTGAAAG-AAAAAAAATAG-AAAACAC--GTTTTTTTCCTTTCCGAAAGAGGCATGCCCGTGCCTCTCGCGG-----
-----------------AAGCAAAACCGTGCCTCTCGCGACAAAAAAACAG------AAAATG--TGTTTTCCCGTTTCT
GAGGAGGCACGGCCGTGACTCTCGCGAAAGCACAACCGTGCCTCTCATGGAAGCAAAACCGTGCCTCTCACGAAAGGAA-
AAAAAAC-AGAAAACACATCTTTTTTTC-TGTTTCC--AAGAGGCACGGCCGTGCCTCTTGCGAAAGTACAACCGTGCCT
TTCGCGAAAACAAAACCATGACTGTCGTGAAA---AAA-AATGTG-TTT-TTTACGCAAAATAATTATTTTTTCAG--GA
AAAAAA--TTTTGGTCGAAAAGCTAGGCAAGACCAGTGGAAAACCAAAACGCAAAAAACCC-C--GAAAAAA--ACCCGT
TTAAAAAGCCGAAAACACGTGCG-------------AAA----AA-AAACAAAATCCAGAGGGAGCGTCCAGAGTGCGAC
ACGTGGCGAATGGCTGAGAGCGTGCCAAGTGGCGCTGATCGTTGCGAGGCTTCCGAAGAAGCGCTCGTTAATTAGTTGCT
CCC-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------
>chr5A_152
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------GAAAAAAAAATAG-AAAAC----GTGTTTTTTCTTTTTGAAAGAGGCACGTCCGTGCCTCTCGCGG-----
-----------------AAGCAAAACCGTGCCTCTCGCGAAAGAAAAAAAA-CAAAAAACGTG---TTTTTTTCGTTTCC
GAGGAGGCACGGCCGTGACTCTCGTGAAAACACAATCGTGCCTCTCGCGGAAGCAAAACCGTGCCTCTCGCGAAAGGAA-
AAAACAG-AAAATACG------TTTTTT-TGTTTTC--AAGAGGCACGGCCGTGCCTCTCGCGAAAGCACACCCGTGCCT
CTCGCGAAAACAAAACCGTGACTCTCGCGGGA---AAA-AATGTG-TTT-TTTGCGCAAAAAAAA-------TTCC---C
AAAT-TTTTTTTTGTCGAAAAGCTAGGGAAGACCGGTGGAAAACCAAAACGTCAAAAAAAC-----GAAAAA--AAACAT
TTAAAAAGCCAAAAACGCGTGCG-------------AAA----AA-A---AAAATCCGAAGGGAGCGCCCAGAGCGCGAC
ACGTGGCGAATGGCTGAGAGCGCGCCAAGTGGCGCTGATCGTTGCGAGGCTCCCGAAGGAGCGCTCGTTAATTAGTTGCT
CCC-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------
>chr3D_788
TACTAA--------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-ACATTGCAATTTGCAAACCCAAATACCCCAATTCCTCCCTAAAAAATAAAAATCCCTGGCGCGGTCATTTGGATTTCGA
GGCTGAAATGAATCCGCTCGCGCGTCTTCTT-GCCTCCCCCCGCGAC---TCTTCCCTCTTTCCCCGCCCGCGCTTCC--
-TTCTTGCTCCCGATCGGTTTCAGTGGTGT---------CGC---------CCCGATCTGCTCCGGCCATGGGCGCCACC
GTCTTCCCCCACTCCCTGGCCTCGCGCGGACCCGCTGCAGCGCTCCCCCGAGCCTGCGCGTCCTCCACCATCCGCATCAA
CCCCGCCTGCGTCGCCAACCCCGCCGCCACCGCCGCCAAGAAACCGAAGCGGCCAGGGTCGTTCGACAGCGGGTATCCGC
CGGCGAAGCGCGTGCCCGGTGTTTCCGGCGAGGTCGAGCCCGATGCCAGGACGAAGAAGAGCCCGCGTCCCTGCCCCGTG
GGCGACGAGGATCCGCGGAGCTCGCTGCCCCGCGGCGTCCAGGCCTCCCGCGTGGCCAAGAACCAGAGCAGCGCCTCGCC
GACTCGTCCTCCCGAGATCACGGCGCCACCGAAGCCTCCGGCCTGCAGCATGCGCGAGCTCCTCCAGAAGGCCCGGCTTG
CCAAGAACCCGGGCAGCGCCTCGCCGCCGAAGCCGGCGGCCTGCAGCGTGGGCGAGCTCCTCGAGAAGACCCGTCCCGCC
AAGGCTCGTCCTGCTGCTGCTGCCGATGCTGAGGCTCAGCCTGAGGCCATCCACCGGCGCGAGATCGAGCGGCGGAGGGC
CGAGGCCCGACGGGAGCTGGAGCGGGTGGTTCGGACGGTGGAGTTCAACGACCCATTCATCGATCCCCAGGACGTGCTCA
AGTGAAGCCAGGGG----TCCATCCATCTCGGAGCAGAGCGATGAACAGAGCAGGATTGAT-CCGTCCAACAAGTGAAGA
ATTCAGGCTTGATTATTTAGCCTGAGCATACAGGTGCCATATGTATGTGTAGTGTAGGTGTATGCAGGTTCAGTTAGTCT
GGCAGTTTCATTGTTAGTGCGAGTGTGATTCCCCCTTGTAACTAAGTAAAGTGGTAAGTACTGTAATATACATTAGTTGG
TCACTTGCTTAATTTAGAGACA--GTTTGATGATGTCGTTCAAATTATTATTTCGTTTGTCTTCAGTCCATGCTACACTG
ACACTAAAGCAGTCAGCACTGAAAGTTTGAGTGTTTTACTGAAAAAGAAATCTAACACTTGTGAAGAACATGTACATCAG
TGAGCAATTCCTTAA-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------
>chr3A_843
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------ATCCCTCGCGCGGTCATTTGGATTTCGG
AGT-----TGAATCCGCTCGCGCGTCTTCTTTGCCGCCCCCCGCGACTCTTCTCCCCTCTTTCCCCGCCCGCGCTTCCCT
CTTCCTGCTCCCGATCGGTTTCGGTGGTCT---------CTTCTCGCGCGTCCCGATCTGCTCCGGCCATGGGCGCCACC
GTCTTCCCCCACTCCCTGGCCTCGCGCGGACCCGCTGCAGCCCTCCCCCGAGCCTGCGCGTCCTCCACCATCCGCATTAA
CCCCGCCTGCGTCGCCAACCCCACCGCCACCGCCGCCAAGAAACCGAAGCGGCCAGGGTCGTTCGACTGCGGGGATCCGC
CGGCGAAGCGCGTGCCCGGTGTTTCCGGCAAGGTCGAGCCCGATGCCAGGACCAAGAAGAGCCCGCGTCCCTGCCCCGTC
AGCGACGAGGATCCGCGGAGCTCGCTGCCCCGCGGCGTCCAGGCCTCCCGCGTGGCCAAGAACCAGAGCAGCGCCTCGCC
GACTCGTCCTCCCGAGCTCACGGCGCCACCCAAGCCTCCAGCCTGCAGCATGCGCGAGCTCCTCCAGAAGGCCCGGCTTG
CCAAGAACCCCGGCAGCGCCTCTCCGCCGAAGCCGGTTGCCTGCGGCGTGGGCGAGCTCCTCGAGAAGACCCGTCCCGCC
AAGGTTAGTC---CTGCTGCTGCCGATGCTGATGCTCAGCCTGAGGCCATCCACCGGCGCGAGATCGAGCGGCGGAGGGC
CGAGGCCCGCCGTGAGCTGGGGCAGATGGTTCGGACGGTGGAGTTCAACGACGCATTCATCGATCCCCAGGACGTGCTCA
GGTGAAGCCAGGG----ATCCATCCATCTCGGAGCAGAGCGATGAACAGAGCAGGATCGATA-CGTCCAACAAGTGGAGA
ATTCAGGCTTGATTATTTAGCCTAAGCATACAAGTGCCATATGTATGTGTAGTGTAGGTGTATGCAGGTTCAGTTAGTCT
GGCAGTTTCATTGTTAGTGCGAGTGTGATTCCCCCTTGTAACTAAGTAAATTGGGAAGTACTGTA--ATACATTAGTTGA
TCACTTGATTAATTCAGAGACAAAGTTTGATGATGTTGTTCAAATTATTGTTTCGTTTGTCTTCAGTCCATGCT--ACTG
ACACTAAAGCAGTCAGCACTAAAAGTTTGAGTGTTTTACTGAAAAAGAAATCTAACACTTGTGAAGAACGGGTACATCAG
TGAGCAATTCCTTAA-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------
>SNPs
----------------SSSSSS-S---------S----------S-------------------S---------------
---------------S-----------------S----------------------------------------S--S--
-----S----------S---S---------------------S-------S-----------------------------
---------------------------S--------S-------------------------------------------
----------------------------------------------------S---------------------------
-------------------SS---S-------------------------------------------------------
--------------------------------SSS------S----S----------------------SSSSS------
---S---------S----------------S-----------SSSSS-----------------------------SS--
-----------S---S--------------------------------------SS------------------------
-----------S------------S----------------------------S--------------------------
---S--S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
S--------S-----------------------S-------S-----S---S----------------S-----------
--------------------------------------------------------------------------------
----------------------S-------SSSSSSSSS-----------------------------------------
-----S--------S--------------------S--S----------------------------S------------
-----------------S---------------------S-------------------------S--------------
---------------------------------S----------------------------------------------
------S-----------------------SS----------------------S-------------------------
----------S-------------------------S-S-------------------------S---------------
----------------------------------SS-----S-----------------------------S---S----
---------------S----------------------------------------------------------------
----------------S----S-----------------------------S----------------------------
-------------SSSS---------------S-------S--------------------S------------------
--------------------------------------------------------------------------------
----------------------S-----------------------------------S---------------------
----------------------------------S-------------------S-------------------------
--------------------------------------------------------------------------------
---------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_848
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------TGGTACCAATATCGCAGGCC--------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------
>reverse_2581
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------CTCGGTTCTCGCGACGAATA----------------------------------------
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--------------------------------------------------
