>input_sequence_72629
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---------------------ATGCCCGCGGCCGTCGCGCTCCTCTGTCGAGGGCGCTCCGGCAAGCCGTGCTACAACCG
GCTAGTATATATGCTACAACCGCCCACGGCCGTGCTACATAGCAACGACAGGAGCGAGACACGGCTGCCGGCGTGCCGTG
CTACAATCGAACCACGAGAAAGCTGCAAGCCTGCAACCGTGGCCTGGAAGGGCTGGAACCGGCAAGCTATTGTGCTGCCA
TCGGCTGTGCCGTGCGCTCAAAACTGGCAAGCTCCGGTGGCACGACCATGGAGGACCGGTGTTGCTACAGGCTATGCCAG
GTGCTGGAACCAGCACGACATCGAGCTGCAACCTGCCGACGGCGCTGCTACGAGTGGTGGGGCACACAACTATGAGCGAA
AAGGCGTGATGCTACCAACGGCGATCTGGGATGCTGGAATCGGCAGCGTGGAGAGTTGCAACCGGCGGCGCCATATGCTA
CAAGCACGCGATGCGGGGATGCTAGAATCGTCTATGTGGAGAGCTGCAACCGCCGCACCGTTTTGCTACTACCGGCAACC
CAGAGTGCTGGAACAGATGAGGAAGGATGCTTCCACAGCGAGCCAGGAAGCTGCAACCGGAGATGAAGTATGTATCCACG
GCGAGGCCAGAGAGGTGCAACCAGCAGGGGGGCGGTGA------------------------------------------
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>chr4B_1_TraesCS4B01G169000
AGTGTGGTCGAAGTAGAGTCCATGGGGATGATGGAAGGATGCTCCGCATCAGGTATAGTACAGAGTACATGTATCTACCA
CGAGATTGTTCTAGTGAATATGAGATGTCTCAATCCCTCTATTGACTAGTCTGGCCTCGGTTTATATAATGCACTATAGG
CTTAGGGTTTAGAAGAGTCTTCGTATTGGGCTCCAAGTCTTGCGGAATCTTCCTTGTATTCGTCACGGGTTGTCCGAAAT
GGCCCATTAGTAAACCGCCATGGGGGTCCTCGGCCCTGCCCTCTTGGTC-GGAGACGACGCGGTGAGTATCCCCTAATTC
GTGACTCCATCAGAAGGGGGGACGCAAAAGGTAGGAGGCGACGACTCAACGGAAAAGAGGAGATCGAGGC---TGTGGGG
GTGGAGGAGAGGCGTGTGAGCCACGTCTTGCTCGGTACCAGATCCGCTACTTCCTTTTTATTTCATAATTTGACACTTCT
ATTGCCACTTCAG-------------------------------------------------------------------
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---------------------------------------------------------------------CACTTCATGCA
AGGACATAGCCCAATACTCAAAATAGAATTATGCTTACTAAACCTAGTTCACAGTGTCATAGAAACCAGATCACTCTAGA
CAAAACCAGGTTCAAAATGAACGGTTCGCTATCTTAGAAAACAATCAACAAAAGAAAGGGAAAATATCAAA-GAAAAATA
AATATGGCCAACTGTAAAAGAGTTGAAAGTGGGAATTTATCAAGGAAAAAGAAAAACGTTTCGGTGCGGCACGTCGGCCG
AAACTTCGGCCGGTCCTTCCCGCTACGTTGGATCGAGTGGCGATCGTAGCGCCCGTACTTAGCCAACTAATCACACGCTA
TCCAAACGAGTGGCTGGGGTGGACCCACACATCACACACGCCCGCCTCTTCCTCCCTTATCCTCACTCAAATCCCCATTT
TTTATCTCAGACGAAGCACATCTAGCACCAGTATCTCCCAGCACCACCACATAGCGACTCACTGTCGCCTACTGCTTGCA
GCTACGAGCTACGACGGCGCCATGCCCGCGGCCGTCGCGCTCCTCTGTCGAGGGCGCTCCGGCAAGCCGTGCTACAACCG
GCTAGTATATATGCTACAACCGCCCACGGCCGTGCTACATAGCAACGACAGGAGCGAGACACGGCTGCCGGCGTGCCGTG
CTACAATCGAACCACGAGAAAGCTGCAAGCCTGCAACCGTGGCCTGGAAGGGCTGGAACCGGCAAGCTATTGTGCTGCCA
TCGGCTGTGCCGTGCGCTCAAAACTGGCAAGCTCCGGTGGCACGACCATGGAGGACCGGTGTTGCTACAGGCTATGCCAG
GTGCTGGAACCAGCACGACATCGAGCTGCAACCTGCCGACGGCGCTGCTACGAGTGGTGGGGCACACAACTATGAGCGAA
AAGGCGTGATGCTACCAACGGCGATCTGGGATGCTGGAATCGGCAGCGTGGAGAGTTGCAACCGGCGGCGCCATATGCTA
CAAGCACGCGATGCGGGGATGCTAGAATCGTCTATGTGGAGAGCTGCAACCGCCGCACCGTTTTGCTACTACCGGCAACC
CAGAGTGCTGGAACAGATGAGGAAGGATGCTTCCACAGCGAGCCAGGAAGCTGCAACCGGAGATGAAGTATGTATCCACG
GCGAGGCCAGAGAGGTGCAACCAGCAGGGGGGCGGTGATACAACCGGCAGCCGGCGAGTTGCAGCCGCATCCAACGACGA
CCGGCCCGGCGAGCTGCAGCCTTCGAGAGTGGAGCTCCAACCAATGTTTGGAGGCTAAGGCTGGGTGCGTGGGGAGGGAG
GGAGGGGGTGAGCTGCTGAGCGCTGGCAAGGCGGGCGCTACCGTGTCCTCGCGGGGGGCGACGAACTGACGATGGAGGCG
ACTTAGTGCGGTGGATATCGCGTACGGGATGAGGATAGAATTTGGACGGCTAATAATGCGTCAATCGGACGTGCGTGGTG
CGATCGGCCGAAACTTCGGCCGGCGCACCGGCGCCTATCATTGGCCAAGGAAAAATATATTAAATGCCGCCAGTTTTTTA
GCTGAGAAGGTGAAGGAGCTACTCGTGGAAAAAGAGAAACTTGCTAGTTCCTTTTGGACATGGGTAATCTGATAAGGGAT
AGTTGTTGGACGGTTAGTGCCGGAATGCAAAGCAGTGCATCATGGCGTGAGACGAGGAATGCCGCTAGGGCGGCAAGGCA
TCGTGTGTAGGAAAGGGCTGGCCTACCCCTCCTTTTGGCCGGTTGTTTGCTTCTGTGGGGATTTGGG-AACGCTTGTGCT
GTAG------TATACCGGGCGGGAGCTTTCTGTTTGTGT-----GGCGCACCGCAGGCCGAG--------GCGGCCGTTT
TTGGATGGATCTATCTAGGA----ATCCCGGAGGAGAAGCGGGAAACGCGGGTG----GCGTGGGCGGCTAGGCCCCTGG
GCACGCCGGCGTCGCGCGTGGCGTACATGCACATCGGTCGACCTCAATCAACGGAAAAGAAAGTTGTTGAGTGGATTCAG
CACTTGATCGG-GG--CTGTGTCGCGGTCGCATTGGCGTCGCTTCCACTGGCACGCAGCGTTGCA---------CCTGCA
CCGCGTTTGCTGCCGTCATCGTGTTTCGGGGGACGTGTAAAATGCCTGCCGATTAGGCACACCCGCACGCATAAGCAACG
AAGATGCGCTTTATGGCTAATCCATCCATCCATCCATC
>chr4D_52
---------------------------------------------------GGTATAGTACATAGTACATGTATCTACCA
CGAGATTGTTCTAACGAATATAAGATGTCTCAATCCCTCTATTGACTAGCCTGGCTGCAGTTTATATAATGCACGGGAGG
CCTAGAGTTTAGAAGAGTCTTAGTCTTGGGCGCCAAGTCTTGCGGAATCTTCCTTGTATCCGTTATGGGCTGTCCGAAGT
GGCCCATTAGTGAATCGTCATGAGGGTCCTCGGCCTCGCTCTCCTGATCGGGAGACGACGTGGTGAGTATTCCCAG-TTC
GTGACTCCATTAAAAGGGAGGACAG-AAAGGTAAGAGGCGACGACTCTACGGAAAAGAGGAAATTGAGGTTGTTGTGGGG
GTTGAGGAGAGGCGTGCGAGTCGCCTCTTGCTCAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCTGTTGCCACTTCGTGCG
AGGACATAGCCCAATACTCAAAATACAAGTATGCTTACTAAACCTAGTTCGCAGTGTCATAGAAACCAGATCACTCTAGA
CAAAATCAGGTTCAAAATGAGTGGTTCGCTATGTTA-AAAAAAATCAACAAGTGAAATGGAAAATATCAAAAGAAAAATA
AATATGGCCAACTGTAAACGAGTTCAAAGTGGAATTTTTT----------------------------------------
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---------------------------------------------CAAGGAAAAAAATATTAAATGCCGCCAGTTTTTGT
AGCTGAA-----AACGAGCTACTCCCGGAAAAGAAAAAACTTGCTAGTTCCTTTTGGACATGGGTAATCTGATAAGGGAC
AGTTGTTGGACGGTTAGTGCCCGAATGGAAAGCAGTGCATCATGGCGTGAGAGGACGAATGCCGCTAGGGCGGCAAGGCA
TCGTGTGCACGAAAGGGCTGGCCTACCCATCCTTTTGGCCGGTTGTTTGCTTCTCTGGGGATTTGGGGAACGCTTGTGCC
GTAG------TACACCGGGCGGGAGCTTTCTGTTTGTGTGGCGTCGCGCACCGCAGGCCGAGGCAGCACCGCGGCCGTTT
TTGGATGGATCTATCTAAGCATATATCCCGGATGAGAGGAGGCAAACGCGGGTG----GCGTGGCCGGCTAGGCCCCTCG
GCACGCCGGCGTCGCGCGTGGCGTACATGCACATCGGTCGACCTCAATCAACGGAAAAGAAAGTTGTTGAGTGGATTCAG
CACTTGATCGG-GGGGCTGTGTCGCGGTCGCATTGGCGTCGCTTCCACTGGCACGCA-----GCATTGCACCTGCCTGCA
CCGCGTTTGCTGCCGTCATCGTGTTTCGGGGGACGTGT--AATGCCTGCCGATTAGGCACGCCCGCACGCATAAGCAACG
GAGATGCGCTTTATGGCTTATCCATCCGTCCATC----
>chr4A_1985
CAAGGAA-------------------------------------------------------------------------
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--------------------------------------------------AAAAATATATTAAATGCCGCCATTTTTTGT
AGCTGAA-----AACGAGCTACTCATGAAAAAGAAAAAACTTGCTAGTTCCTTTTGGACATGGGTAATCTGATAAGGGAT
AGTTGTTGGACGGTTAGTGCCCGAATGGAAAGCAGTGCATCATGGCGTGAGACGACGAATGCCGCTAGGGCGGCAAGGCA
TCGTGTGCACGAAAGGGCTGGCCTACCCCTCCTTTTGGCCGGTTGTTTGCTTCTCTCGGGATTTGGC-AACGCCTGTGCT
GTAGTAGTACTACACCGGGCGGGAGCTTTCTGTTTGTGC-----CGCGCACCGCAGGCCGAGGCAGCACCGCGGCCGTTT
TTGGATGGA----------------------------GGATGGAAACGCGGCTGGCGTGCGTGGCCGGCTAGGCCCCTGG
GCGTGCCGGCGTCGCGCGTGGCGTACATGCACATCGGTCGACCTCAATCAACGGAAAAGAAAGTTGTTGAGTGGATTCAG
CACTTGATCGACGGGGCTGTGTCGCGGTCGCATTGGCATCGCTTCCACTGGCACGCAGCGTTGCATTGCACCTGCCTGCA
CCGCGTTTGCTGCCGTCATCGTGTTTCCGGGGACGTGT--AATGCCTGCCGATTAGGCACACCCGCACGCATAAGCAACG
GAGATGCGCTTTGTGGCTTATCCATCCATCCATC----
>SNPs
SSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------S-----------------
-------------SS------S---------------------------S-----SS-S---------------SSS---
-S---S---------------S--S------S---------------------------S---S-S---S--------S-
-----------S--S--S----S------------SS--S---S--S-------------S---------S---SSS---
----------S-S-----S----SSS-------S-------------S-------------S--S----S----------
--S-------------S---S-S-S--------S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSS-------------------------------------------------------------------
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---------------------------------------------------------------------------S---S
-------------------------S--S---------------------S-----------------------------
-----S--------------SS----------S---S----S---------SS----S----------------------
------------------S-----S-------S-S---S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------------------SS
SSSSSS-SSSSS--S---------S-------SS-S--------------------------------------------
---------------------S-----S---------------------------S------------------------
-------S-S--------------------------------------------S-------------------------
------------S-------------------------------S-----------------------------------
-----------------S-S------------S----S-S------------------------S---------------
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--------------------------------------SS----------------------------------------
S-----------------S---------------SSSS
>forward_949
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-------------------------------------------------AGAAAAACGTTTCGGTGCGG-----------
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>reverse_1808
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-----------------------------------------------AAGCTGCAACCGGAGATGAA-------------
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>forward_1708
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--------CGATGCGGGGATGCTAGAAT----------------------------------------------------
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>reverse_2578
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-----------------GGAATCCCGGAGGAGAAGC--------------------------------------------
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