>input_sequence_72597
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---------------------------------------------------ATGGCGTTAGCCCCCACATCTCTCCAGAG
CTTCCTCACAGGGAGGCCCCTATGCACGGCCCCGCAGCTCACGAGGTCGTCAATTAGGCCGGCATCGGCGAGGCTCTCTT
GCAGGGCCTCCAACCAGAAGGACGCGCCTCCGTCGTGGGCCGGAGACCTCGAGCTGAAGAATCTCGGGAGGCTGGCGATG
GTCGCCCTGGCCGCCGGCGTGCTCGTGCTCGCGCCCGTCGATGACGCCATGGCGGGCAAGTCAGGCGGCAGGATCGGCGG
GAAGGCGTTCCGTTCCGCGGCGCCGCGCTCGTCCGGTCCAAGGATAAACAACTCAAGGTAACCATCAATTAAACATCAGC
CAGATGGCCAGATCTAACGTAGCAATAGCCTGATGCAATTCTGATTTGTTTTGTGATGCTCGCGCGCGTGCTCGCAGGAC
GAACATCTACGTCAATCCCGGCGTGGCGCCACCGCTGGTCGGCGGCTACGGCTACGGTGGCTATGGCGGGTACGGCTTGT
CGCCGTTCGGCTTCTACGGTGGCCCGAGCGTCGCCCTCGGGGTCGGTGGCGGCTTCGACACGCTCGTCCTGTTCATTGTG
GGCGGGGCGGTCGTCGGCGCCGTCCGGCGGTTCCTCAACCGCAGGGATAACGATGATTACGACGACTAA-----------
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----
>chr7A_1_TraesCS7A01G429600
CTGGAGGGAATTTGGCTCAAGGTGGAGATTGTTAAATTGTGATCCAAATTCTATCGTATTGACTAGACGTAGTATATACG
GTGTGGGCCTTTGCGTTGGTACCGACGCGTACGAGTACAACTCGTTTACTTGTCCTCCAAGGACTCTTGTATTGCCCTCT
TATATACCCCATGTAATCGCACCTAAAGACGGCCTGTCGCCTCGTGCTTGTAATACTCCTCATAGTGATTGCGCCTTCGT
TCGTCCGTGATTTTCTCCCGCAAGGGTTTCCACGTAAAAATCCGTGTCTCTCTATCTCATTTATTTCTCGTTATTATCTA
ACAACAGCCATAGCCTGCCCTGCCAATTTTTCAGTCGTTGACTGCTACCGCAACCTTCGTTTAGATCAGCGCCGATGAAT
TGCAACCATGCCAATTTTTCGGTCAGTCCGTTCAGATTTTCCGCCCACGCGTTGGCG------GGGTGGCGAAAACCTTC
GCCAAACTCTTGGCGAGCCTATTTTGGCTGGGCTGGCTCGGGCGTCATCCAAACAGCCCCTATAGTTCCCTCATAAATGG
CGACTCTGTATTCTTTTTTTCTTTTTCCTCTC--TTAAAAAATGGGCATAGCTCTTGCATCGTAAAAAGAATGGCTGGAG
AAACTGAAATGTGAAAGCACCAGATTCAACCGTGTGCCAAA--CACAGCTGCATGTTTGTGTGTTCAGAACAAGTCGTGC
TACGGAACAAACAAGCGCTCAAAAGATATCTCTTCTCTAGAGGTTTCACCCGGCCGCTCACATTCGGCCAAGTGGCCTCT
TGCTCATCTCAAGATAAGCCTTCTAGTCTCCTACTGCCCTTCCTCCTCCTCCAGCCAAAACGCGGCAATCCCTG-AAGCT
ACAAGATTACCCTTCTTTCACCACTTCCCATCTCAAACTGCAGCAAGCAATCAAGAAACTCAGAGAAGGAAGAAGACATA
GCAAGAGCAAGTAAAGCAAGCAAGCTAGAAGCCCAGGGAGAGATCACGGCCATGGCGTTAGCCCCCACATCTCTCCAGAG
CTTCCTCACAGGGAGGCCCCTATGCACGGCCCCGCAGCTCACGAGGTCGTCAATTAGGCCGGCATCGGCGAGGCTCTCTT
GCAGGGCCTCCAACCAGAAGGACGCGCCTCCGTCGTGGGCCGGAGACCTCGAGCTGAAGAATCTCGGGAGGCTGGCGATG
GTCGCCCTGGCCGCCGGCGTGCTCGTGCTCGCGCCCGTCGATGACGCCATGGCGGGCAAGTCAGGCGGCAGGATCGGCGG
GAAGGCGTTCCGTTCCGCGGCGCCGCGCTCGTCCGGTCCAAGGATAAACAACTCAAGGTAACCATCAATTAAACATCAGC
CAGATGGCCAGATCTAACGTAGCAATAGCCTGATGCAATTCTGATTTGTTTTGTGATGCTCGCGCGCGTGCTCGCAGGAC
GAACATCTACGTCAATCCCGGCGTGGCGCCACCGCTGGTCGGCGGCTACGGCTACGGTGGCTATGGCGGGTACGGCTTGT
CGCCGTTCGGCTTCTACGGTGGCCCGAGCGTCGCCCTCGGGGTCGGTGGCGGCTTCGACACGCTCGTCCTGTTCATTGTG
GGCGGGGCGGTCGTCGGCGCCGTCCGGCGGTTCCTCAACCGCAGGGATAACGATGATTACGACGACTAAATGATACGAGT
CATGTTCATGTAATATCATCCGACCCTTGTAATATAGCGAGATTACTATTTTGCTCTTGTCAATGGTAATTTTGAAGTAA
ACATAGTAATATCGAACGAGCAATGAGAATCAGAAAGTGTGTATAAATTTGTTATTTTCGCAGAAATGGAAGAAGAAATT
GTAGTTAGTACTCTACCTTTTTT-T--AAGAAATTATAGTTACTTTATGCTGTTCTGCACTGCTAATACGGTGCATTTCT
CTTTCATCTTAT------------------------------------------------------------AC-GTCCG
ACGTTATGGGACGGACGAAGTACAAATTTTGCATTTGTCTATCTACTTATATGTATAGAAAAATAGATGACACCCCGCAA
ATTTTTTCGAAATATAAGATGCATAAATGATCAAGTAATTAAAGGATTCAATGGCATACCTTGTTTTTTCTATTTGTATA
TTAATATAGGATCCAA----------------------------------------------------------------
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---AATGTAGGCAACATAGGTTGTCAGTAGTATATATACTAGATGTTCATAATGGTGGATGACGGCGGCTATTGATATCT
GAAAAAGGAACACAACAAAAGATTAGGATTAGAAAATATTTTATTTTAGAAAAA-TACATGCTGATATAGGATAA-GGCA
TATTGAACAACCAACAGTTCATGTTGGATCATGACTTATGAATGACCTGAATTGAATGAACCAATAAATGCCTCCATTAA
AAGTTGATCAAAATGCTTCTAGGATGCAGACTCATCAAAATAACATCAATACAATTCAGAAGGAAGGCAGCAATCAGCAT
CAACATAGCTGCAAGCCTTTACGTGATAAACAGTTTGCGTGCTGCAATCATCCAGTATGAGCCATTGGCGTGAAAATAGG
AAGAACCAAGAGCCATGACAATTATGCCTTGATCAATAGCTCGGTACT--AATAATGCCCAGATTGATCTTGCGGGCATG
CTGCAATTCAACAATTGGATCGCTGATCTCGGCCTCCGAGAGCTAGATAGGGTTAGGGCCAGGTTTACCTAGACTAACCG
ACAC
>chr7B_325
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----CAGCCGTCGCCTGCCCTGCCAATTTTTCGGTCGTTGACTGCTACCACAACCTTCATTTGGATCAGCGCCGATGAAT
CGCAACCATGCCAATTTTTCGGTCGGCCCGTTCAGATTTTCCGCCCACGCGTTGGCGAGATCCGGGCGGCGAAAACCTTG
GCCAAATTCTTGGGGAGCCTATTTTGGCTGGGCTGGCTCGGGCGTCATCCAAACAGCCCCT-TAGGTCCCTCATAAATGG
CGACTCTGTATT-TTTTTTTCTTTTTCCTCTC--TTAAAAAATGGGCAGAGCTCTTGCACCGTAAAAAGAATGGCTAGAG
AAACTAAATTGTGAAAGCACCAGATTCAACCGTGTGCCAAA--CACAGCTGCATGTTTGTGTGTTCAGAACAAGTCGTGC
TACGGAACAAACAAGCGCTCAAAAGATATCTCTTCTCTAGAGGTTTCACCCGGCCGCTCACATTCGGCCAAGTGGCCTCT
TGCTCATCTCAAGATAAGCCTTCTAGTCTCCTACTGCCCTTCCTCCTCCTCCAGCCAAAACGCGGCAATCCCTG-AAGCT
ACAAGATTACCTTTCTTCCACCGCTTCCCATCTCAGACTGCAGCAAGCAATCAAG-AACTCAGAGAAAGAAGAAGACATA
GCAAGAGCAAGCAAAGCAAGCAAGCTAGGAGCCGAGTGGGAGATCACGGCCATGGCGTTAGCCCCCACATCTCTCCAGAG
CTTCCTCACAGGGAGGCCCCTATGCACGGCCCCGCAGCTCACGAGGTCGTCAATTAGGCCGGCATCGGCGAGGCTTTCTT
GCAGGGCCTCCGACCAGAAGGACGCGCCTCCGTCGTGGGCCGGAAACCTCGAGCTGAAAAATCTCGGGAAGCTGGCGATG
GTCGCCATGGCCGCCGGCGTGCTCGTACTCGCGCCCGTCGACGACGCCATGGCGGGCAAGTCCGGCGGCAGGATCGGTGG
GAAGGCGTTTCGGTCCGCGGCACCGCGCTCGTCCGGTCCAAGGATAAACAACTCAAGGTAACCATCAATTAAACATCTG-
CAGATGGCCAGATCCAACGTAGCAATAGCCTGATGCAATTCTGATTTGTTTTGTGATGCTCGCGCGCGTGCTCGCAGGAC
GAACATCTACGTCAATCCCGGCGTGGCGCCACCGCTGGTCGGCGGCTACGGCTACGGTGGCTATGGCGGGTACGGCTTGT
CGCCGTTCGGCTTCTACGGTGGCCCGAGCGTCGCCCTCGGGGTCGGTGGCGGCTTCGACACGCTCGTCCTGTTCATTGTG
GGCGGGGCGGTCGTGGGCGCCGTCCGGCGGTTCCTCAACCGCAGGGATAACGATGATTACGACGACTAAATGATACGA--
-ATGTTCATGTAATGTCATTCGACCCTTGTAATATAGCGAGATTACTATTTTGCTCTTGTCAATGGTAATTTCGAAGTAA
ACATAGTAATATCGAACGAGCAATGAGAATCAGAAAGTGTGTATAAATTTGCTATTTTCGCAGAAATGGAAGAAGAAATT
GTAGTTAGTACTCTACCTTTTTTCT--AAGAAATTATAGTTACTTTATGCTGTTCTGCACTCCTAATACGGTGCATTTCT
CTTTCATCTTACAGAGGCGCCAATGCTACTTAAAAAACCTCATCCCATAATGTAGAACGTATAGCTTACAAAAATGTCCG
ATGTTATGGGACGGACGGAGTATAGATTTTATATTTGTC--------TATATGTATAGAAAAATAGATGACACCCCGCAA
TTTTTTTCGTAATATAAGATGCATAAATGATTAAGTAATTAAATGATTCAATGGCATACCTTGTTTTTTCTATTTCTATA
TTAATATAGGATCCAA----------------------------------------------------------------
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---A----------------------------------------------------------------------------
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>chr7D_558
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---CTCTGTATTCTTTTTTCCTTTTCCTACCTTATTAAAAAATCGGCAGAGCTCTTGCACCGAAAAGAGAATGGCTGGAG
AAACTGAAATGTGAAAGCACCAGATTCAACCGTGTGCCAAGCGCACAGCTGCATGTTTGTGTGTTCGGAAAAAGTTGTGC
TACGGAACAAACAAGCGCTCAAAAGATATCTCTCCTCTAGAGGTTTCACCCGGCCGCTCACATTCGGCCAAGTGGCCTCT
TGCTCATCTCAAGATAAGCCTTCTAGTCTCCTACTGCCCTTCCTCCTCCTCCAGCCAAAACGCGGCAATCCCTGAAAGCT
ACAAGATTACCCTTCTTTCACCACTTCCCATCTCAAACTGCAGCAAGCAATCAAGAAACTCAGAGAAGGAAGAAGACATA
GCAAGAGCAAGCAAAGCAAGCAAGCTAGAAGCCCAGGGAGAGATCACGGCCATGGCGTTAGCCCCCACATCTCTCCAGAG
CTTCCTCACAGGGAGGCCCCTATGCACGGCCCCGCAGCTCACGAGGTCGTCAATTAGGCCGGCATCGGCGAGGCTCTCTT
GCAGGGCGTCCGACCAGAAGGACGCGCCTCCGTCGTGGGCCGGAAACCTCGAGCTGAAAAATCTTGGGAAGCTGGCGATG
GTCGCCATGGCCGCCGGCGTGCTCGTACTCGCGCCCGTCGACGACGCCATGGCGGGCAAGTCCGGCGGCAGGATCGGTGG
GAAGGCGTTTCGGTCCGCGGCACCGCGCTCGTCCGGTCCAAGGATAAACAACTCGAGGTAACCATCAATTAAACATCTGC
CAGATGGCCAGATCTAACGTAGCAATAGCCTGATGCAATTCTGATTTGTTTTGTGATGCTCGCGCGCGTGCTCGCAGGAC
GAACATCTACGTCAATCCCGGCGTGGCGCCACCGCTGGTCGGCGGCTACGGCTACGGTGGCTATGGCGGGTACGGCTTGT
CGCCGTTCGGCTTCTACGGTGGCCCGAGCGTCGCCCTCGGGGTCGGTGGCGGCTTCGACACACTCGTCCTGTTCATTGTG
GGCGGGGCGGTCGTCGGCGCCGTCCGGCGGTTCCTCAACCGCAGGGATAACGATGATTACGACGACTAAATGATACGAGT
CATGTTCATGTAATGTCATCCGACCCTTGTAATATAGCGAGATTACTATTTTGCTCTTGTCAATGGTAATTTTGAAGTAA
ACATAGTAATATCGAACGAGCAATGAGAATCAGAAAGTGTGTATAAATTTGTTATTTTCACAGAAATGGAAGAAGAAATT
ATAGTTAGTACTCTACCTTTTTTTAAAAAGAAATTATAGTTACTTTATGCTGTTCTGCACTGCTAATACGGTGCATTTCT
CTTTCATCTTACAGAGGTGCCAACGCTACTTAAAAAATCTCGTCCCATAATGTAAGATGTATAGCTTAAAAAAC-GTTTG
ACGTTATGGAACAGACGGATGACAAATTTTATATTTGTCTATCTACTTATATGTATAGAAAAATAAATGACATCCCGTGA
AAAATTTCGTAATATAAGATGCATAAATGATTAAGTAATTAAAAGATTCAATGGCATACCTTGTTTTTTCTATTTCTATA
TAGATCCGAAGAGCAAACTATTCCTATATTACAACTGAACACGGCCCTTTGATGATACTCCCTCCGTCCTTGAAAGAGTG
TAGTTTCAACTTCGTTGGAGGGTCAATCTATCTTAAAGTTTGACCGAGCTTATGCAAAAATATGTCAATATTTGTGAAAC
CAAATAGGTATATGACGAAAATATATTTTATCATGAATGTAATGCTACTAATTTGATGGCATATATGTTGGTCTATTATT
TTATATATATGGTCAAACATAAAAAAAGTTTGACTTTTCAATAAAGTTGGAAGTACACTCTTTTAAGAATAGAGGGAGTA
AGTAATGTAGGCAACATTGGTTGTCAGTAGTATATATACTGGATGTTCATCGTGGTGGATGACGGCGGCTATTGATATTT
GAAAAAGGAACACAACAAAATATTAGGATTAGAAAATATTTTA-TTTAAAAAAA-TGCATGCTGATATAGGATAAAGGCA
AATTGAACAACCAACGGTTCATGCTCGATCATGACTTATGAATGACCTGAATTGCATGAACCAATAAATGCCTCCATTAA
AAGTTGATCAAAATGCTTCTAGGATGCAGACTCATCAA------------------------------------------
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>chr7B_2102
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---AATGTAGGCTACATAGGTTGTCAATACTATATATACTGGATGTTCATCATGGTGGATGACGGCGGCTATTGATATCT
GAAAAAGGAACACAACAAAAGATTAGGATTAGAAAATATTTTA-TTTAAAAAAAATACATGCTGATATAGGATAAAGGCA
TATTGAACATCCAACAGTTCATGCTCGATCATGACTTATGAATGACCTGAATTGAATGAACCAACAAATGCCTCCATTAA
AAGTTGATCAAAATGCTTCTAGGATGCAGACTCATTAAAATAACATCACTACAATTCAGAAGGAAGGCAGCAATCAGCAT
CAATATAGCTGCAAGCCTTTACGTGATAAACAGTTTGCGTGCTGTAGTCATCCAGTATGAGCCATTGGCATGAAAATAGG
AAGAACCAAGAGCCATGACAATTATGCCTTGATCAATAGCTCGGTACTAAAATAATGCCCGGATTGATCTTGCGGGCATG
CAGCGATTCAACGATTGGATCACTGATCTCGGCCTCCGAGAGCTAGATAGGGTTAGGGCCAGGTTCACCTAGACTAACCG
A---
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSS-----S-S--------------------S----------------S--------S---S-----------------
S-----------------------S-S---------------------------------------S------------S
------S------S-----------------------------------------------S---S--------------
------------------------------------------------S----------S--------------------
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-----------S--------------------------------------------------------------------
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-----------S--------------------------------S-------------S----------S----------
------S-------------------S--------------S--------------------S--------------S--
---------S--S--------S-------------------------------------------------------S--
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--------------S-----------------------------------------------------------------
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-----------S--------------------------------------------------------------------
-----------------S------------SS------------------------------------------------
---------S---------------------S-----------S-------------------------------S----
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----------------------------------------S---------S-----------------------------
-------------------------------------------S----S-------------------------------
-----------------------S-S------------------------------------------------------
------------------------------------------------S-------------------------------
---S----------------------------------------S-S----------------------S----------
------------------------------------------------------------S-------------------
-S--S-------S--------S-------------------------------------------S--------------
-SSS
>forward_263
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---TCCGTGATTTTCTCCCGCAA---------------------------------------------------------
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>reverse_1179
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----------------------------------------------------------GAATCTCGGGAGGCTGGC----
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>forward_542
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------------------------------------------CGTCATCCAAACAGCCCCTA------------------
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>reverse_2804
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---CATAGCTGCAAGCCTTTACGT--------------------------------------------------------
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