>input_sequence_72555
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-----------------------------------------------------ATGGCGGGCGACAGGTGCGCGGGCGCG
ATCGCGGGGTGCGAGCTGTGCGGGGGCGTCGCGGCGGTGCACTGCGCGGCGGACTCGGCGTTCCTCTGCGTGCCCTGCGA
CGCCAAGGTGCACGGCGCCAACTTCCTCGCCTCCAGGCACCTGCGCCGCCGCCTCGTCCACGCGGCCGCGGACGGGGACG
CCGGATCCGCGGGCTCGGGCTCGGGCTCGGAGTCGTCGTCCAGCTCCTCCTGCGTGTCCACCGCCGACTCGTGCGCGGCC
GCCTCCGCGGCGACGCGGGCGGCGGGGCGGAGGAGGGCAGGGTGCAAGCACCGGCGCGCGCGTGCGGAGGTGGTCCTCGA
GGGGTGGGCCAAGCGGATGGGGCTCGCGCCGGGGACAGCCCGCCGGCGGGCAGCGAGGGCCGCGGGCGCGCTCCGGGCGC
TGGGCCGTGGCGTCTCCGCCTCCCGCGTCCCGCTCCGCGTCGCGATGGCCGCCGCGCTCTGGTCGGAGGTCGCCGGATCC
GGCTGCGCGGAGGCCGCGCTGCTCCGCCGGCTGGAGGCAAGCTCGCACGTGCCGGCGAGGCTGGTTGTCACGGTGGCGTC
GTGGATGGCGCGCACCGCTGTCCGGGCCGCCGTCCCCGCCCCAGCCGAGGAGGGCTGGGCCGAGTGCTCCTGA-------
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>chr6D_1_TraesCS6D01G143100
GTGTAAGTTCGGTAAGCTATCACAGGGGTGTAAAAGAGTACACATTTGGTGTTCCCGGGGCACCAGGGCCATTGGATCTG
CGATACAAAGGACAATGTCTATGTTCCACAAGGTTAGCACAAAACACCCCATGAGTCCCACAATTGCGCGTATGCCCAGA
GCTCCGACCCTGACCGATGGATCACACATCCAAGCTCAGCGGCACATTGCACGGAGAAGGAAAATGGAGGAAGCATGGAG
AAGGGAAAAGGAGGCCGGAAGGAGGGTGACTCGTCCACTGCCCTTCATTTTTTATGATCCAACGGAACAGGACGACTGGC
TACGTCCTAATCCGTG-GGTAGAGCATCGATCAAATCCTGACCCTCCACCTCAGATCAAGCGGCTCTGTTGAGTTGCATT
TATGGCGGCAACGGCACCGGCAGCCAGCTAGCTCCCATA----CTACCAGAATACTGCCCACTTGCAGCAGCTCAAAATA
TCTGGGCGTACAACACGGCGAGGAACGTCAGCCACAAATAAGATCGAGCCCCACCCAA-CACCCCGACCCCCGCCGTCCA
CACACTCCCAAATGGAAAACCGCACGCTCCACATTCTTTT-CTCCACGGCCCGCCGATTCATCAATCGCACGGCCCCGGT
GAGCAGGAGCTGGACTACGCTTCCCCGCTAGGAGCCACTGGTCTCCATCCCAGGGCAGGGGGCCTCTTTAAATATCCTCC
ACCCGACCTGCCTGCCGACTCCAAAGTCCGTCCAAACCCATCTCTCGCATCTCG-----CCTCCTCCCCCACGCCGCAGT
TTCCCGACCTCGGCGCAGACCGCAGAGACCAGGTCTCCCGTCTCCCCTCTCCGACTCGCGGTCGCCGCCGGCTTCCTTCT
TCCCGGAACGCGCGGGCCACGCTAGCTCCGGCGTGCTTGG-TTTCATAGCCGCGAGCGATCCATCCATCCCCCGCCTAGA
GGCTGCAGGCGGAGGCTGCTCGGCGGATCGAGAAGAGAAAATTGTTGTTCGTAATGGCGGGCGACAGGTGCGCGGGCGCG
ATCGCGGGGTGCGAGCTGTGCGGGGGCGTCGCGGCGGTGCACTGCGCGGCGGACTCGGCGTTCCTCTGCGTGCCCTGCGA
CGCCAAGGTGCACGGCGCCAACTTCCTCGCCTCCAGGCACCTGCGCCGCCGCCTCGTCCACGCGGCCGCGGACGGGGACG
CCGGATCCGCGGGCTCGGGCTCGGGCTCGGAGTCGTCGTCCAGCTCCTCCTGCGTGTCCACCGCCGACTCGTGCGCGGCC
GCCTCCGCGGCGACGCGGGCGGCGGGGCGGAGGAGGGCAGGGTGCAAGCACCGGCGCGCGCGTGCGGAGGTGGTCCTCGA
GGGGTGGGCCAAGCGGATGGGGCTCGCGCCGGGGACAGCCCGCCGGCGGGCAGCGAGGGCCGCGGGCGCGCTCCGGGCGC
TGGGCCGTGGCGTCTCCGCCTCCCGCGTCCCGCTCCGCGTCGCGATGGCCGCCGCGCTCTGGTCGGAGGTCGCCGGATCC
GGCTGCGCGGAGGCCGCGCTGCTCCGCCGGCTGGAGGCAAGCTCGCACGTGCCGGCGAGGCTGGTTGTCACGGTGGCGTC
GTGGATGGCGCGCACCGCTGTCCGGGCCGCCGTCCCCGCCCCAGCCGAGGAGGGCTGGGCCGAGTGCTCCTGAGCCACCT
GCTCCGGCCCGGGCCCATCTCCCTCCCGTCGACGAGCCGAACAAGGAAG---GAAGGAAGCGAGCCTGAGATAGAATTAC
ACGTAGAATGTAACATGTGAAGCAAAGTTCGTTTGTTTAATTTTCCCCGCCTTATTCTAAGCACGATTATACATACTATT
ATTCTTTTTTTTATGGTTACTATTATTCTTA---TTAATATTCCTTCATCATGGAA--------------GCAAAAGATC
TTCTCATTTTTATTTTATTCTTGATTTTGGGGGA-TGGATGCAAAAAGATCTTGTGGTTAGGAAGCGCGAGACGAGGTCC
AGAGCCGAATGGATGGGAGTG-TTTTGACCGTCTGTGCGTGATGATTAAATAGAGTAACTAAAGTTGATCTTGGTTAAGA
CTTACGTAAGTCGAAGAATGTCGACGATACCTTCCGTGCTGGCGTCCGTTGGCTTCGTGCGTCGTGTGCGTTCGATTGGT
GGCTGTCGACGTTAATCTTCTCTAACCACACATCGCCGCGGCGTACTTGCTCCAGGAG-----AGGGATCGAGCTCATGG
TTCCGGCTGACCTCGTCGGTCGCTGTCTGTCTGTCTTCCCCCTCGCC------TCGCCCTCGCCATCGGTTTTGAGGAAG
TGCATGCACACAC--CGTCCTCCCCGAGAGCGAGCGTGGACCTGGTACTCTGTACTGGTGTCTGGTGGTGGTAGAGCTTG
CCGTGAATAGAGTAAAATGCACTGGCGGTACTTGAACTTGGGAAGAAAGCACATTTTGGTCACTGTACTTTAAAATACGA
CCAATACGGTCACTCAATACGCCTGCACGTGATTGTACGGTCACTGTTCACCGTACGCCACTTGTCGCCGCTCCATTTGA
CCACTTGTTGACCAATCCGAGGCGACAGCTGGCGTTTGCGGGGTTTTTTTTATATGTAAATTAGCCCGGCGCATCTAATT
TCATCCACCACCCTGAAATATCAGTGCCGAATCCCTAATTCCCCACTCCCTCCCCCTGTTGCTTTGCG
>chr6A_291
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--------------------------------------------------TTTATGATCCAATAGAACAGGACGACAGGC
TACGTCCTAATCCCTACGGTAGAGGACTGATCAAATCCTGACCCTCCATCTCAGATCAAGCGGCTCCGTTGAGTTGCATT
TATGGCGGCAACGGCACCGGCCGCCAGCTAGCCCCCATATTCTCTACCAGAATAGTGCCCACTTGCATCGGCGGAAAATA
TCTGGGTGTACAACACGGCGGGGAACGTCAGCCACAAATAAGATCTAGCCCCACCCAA-CACCCCGACCCCCGCCGTCCA
CACACTCCCAAACGGAAAACCGCACGCTCCACATTCTTTTTCTCCACGGCCCGCCGATTCATCAATCGCACGGCCCCGGT
GAGCAGGAGCAGGACTACGCTTCCCCGCTAGGAGCCACTGGTCTCCATCCCAGGCCAGGGGGGCTCTTTAAATATCCTCC
ACCCGACCTGCCTGCCGACTCCAAAGTCCGTCCAAACCCATCTCTCCCATCTCACCTCACCTCCTCCCCCACGCCGCGGT
TTCCCGACCACCGCGCAGAGAA-------CAGGTCTTCCGTCCTCCCTCTCCGACTCGCGGTCGCCGCTGGCTTCCTCCT
TCCCGGAACGCGCGGGCCACGCTAGCTCCGGCGGGCTTGG-TTTCATAGCCGCGAGCGATCCATCCACCCCCCGCCTAGA
GGCTGCAGGCGGAGGAC-----------CGAGAAGAGAAAATTGTTGTTCGTAATGGCGGGCGACAGGTGCGAGGGCGCG
ATCGCGGGGTGCGAGCTGTGCGGGGGCGTCGCGGCGGTGCACTGCGCGGCGGACTCGGCGTTCCTCTGCGTGCCCTGCGA
CGCCAAGGTGCACGGCGCCAACTTCCTCGCCTCCAGGCACCTGCGCCGCCGCCTCGTCCACGCGGCCGCGGACGAGGACG
CCGGATCCGCGGGCTCGGGCTCGGGCTCGGAGTCGTCCTCCAGCTCCTCCTGCGTGTCCACCGCCGACTCGTGCGCGGCC
GCCTCCGCGGCGACGCGGGCGGCGGGGAGGAGGAGGGCCGGGTGCAAGCACCGGCGAGCGCGGGCGGAGGTCGTCCTCGA
GGGGTGGGCCAAGCGGATGGGCCTCGCGGCGGGAACGGCACGCCGGCGGGCGGCCAGGGCCGCGGGCGCGCTCCGGGCGC
TAGGCCGTGGCGTCTCCGCCTCCCGCGTCCCGCTCCGCGTCGCGATGGCCGCCGCGCTCTGGTCGGAGGTCGCCGGATCC
GGCTGCGCGGAGGCCGCGCTGCTCCGCCGGCTGGAGGCAAGCTCGCACGTGCCGGCGAGGCTGGTGGTCACGGTGGCGTC
GTGGATGGCGCGCACCGCGGTCAGGGCCCCCGCCCCCGCCCCCGCCGAGGAGGGCTGGGCCGAGTGCTCCTGAGCCACGG
CCA-CGGCCCGGGCCCATCTCCCTCCCGATGACGAGCCGAAC----AAG---GAAGGAAGCGAGCCCGAGATAGAATTAC
ACGTAGAATGTAACATGTGAAGCAAAGTTCGTTTGTTTAATTTCCCCCGCCTTATTCTAAGCACGATTATACATATTG--
----------------------------TTA---TTAATATTCCTTCATCATGAATTCATCAT---GGGGGCAAAAGATC
TTCCCATCTTTATTATATTTTTTGTTTTGGGGGGGTGGAGGCAAAAAGATCTTGTGGTTAGGAAGCGCGAGACAAGGTCC
ACACCCGAATGGATGGGAGAG-TTT-GACTGCCTGTGCGTTATGATTAAATAGAGTAACTAAAGTTGATCTTGGTTAAGA
CTTATGTG-GTCGAAGAATGTCGATGATACCTTCCGTGCTGGCCTCCGTTGGCTTCGCGCGTCGTGTGCGTTCGATTGGT
GGCTGTCGACGTTAATCTTTGCTAACCACAAATCGCCGCGGCGTACTTGCTCCAGGAG-----AGGGATCGAGCTCATGA
TTCCGGCTGACCTCGTCGGTCGCTGTCTGTCTGTCTTCCCCCTCGCCTCGCCCTCGCCCTCGCCATCGGTTTTGAGTAAG
TGCATGCACACACACCGTCCTCCCCGAGAGCGAGCGTGGACCTGGTACTCTGTACG-------GGTGGTGGTGGAGCTTG
CCGTGAATA-----------------------------------------------------------------------
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>chr6B_301
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------------------------------------------------------------AATGGTACATGGCGACCGGC
TACGTCATGATCCCTTCGGTAGAGCACTGATCAAATCCTGACCCTCCATATCAGATCAAGCGGTTCTGTTAAGTTGCATT
TATGGCGGTAACGGTACGGGCAGCCAGCTAGCTCTCATA----CTAGTACAAAACTGCCCACTTGTACCAGCTCAAAATA
TCTGGGTGTACAACACGGCGAGGAACATCAGCCACAAATAAGATCGAGCCCCACCCAAACACCCCGACCCCCGCCGTCCA
CACACTCCCAAACGGAAAACCGCACGCTCCACATTGTTTTTCTCCACGGCCCGCCGATTAATCAATCGCACGGCCCCGGT
GAGCAGGAGCTGGACTACGCTTCGCCGCTTGGAGCCACTGGTCTCCATCCCAGGGCAGGGGGCCTCTTTAAATATCCTCC
ACCCGAGCTGCCTGCCGACTCCAAAGTCCGTCCAAACCCATCTCTCGCATCT---CTCACCTCCTCCCCCACGCCGCGGT
TTCCCGACCTCGTCGCAGACCGCACAGACCAGGTCTGCCGTCTCCCCTCTGCAACTCGCGGTCGCCGCCGGCT---TCCT
TCCCGCAACGCGCGGGCTACGCTAGCTCCGGTGGGCCTGGTTTTCATAGCCGCTAGCGATCCATCC----CCTGCCTAGA
GGCTGCAGGCAGAGGCTGGTCGGAGGATCGAGAAGAGAAGCTGC-TGTTCGTAATGGCGGGCGACAGGTGCGCGGGCGCG
ATCGCGGGGTGCGAGCTGTGCGGGGGCGTCGCGGCGGTGCACTGCGCGGCGGACTCGGCTTTCCTCTGCGTGCCCTGCGA
CGCCAAGGTGCACGGCGCCAACTTCCTCGCCTCCAGGCACCTGCGGCGCCGGCTCGTTCACGCGGCCGCGGGCGAGGACG
CCGGATCCGCGGGCTCGGAG------TCGGAGTCGTCGTCCAGCTCCTCCTGCGTGTCCACCGCCGACTCGTGCGCGGCC
GCCTCCGCGGCGACGCGGGCGGCGGGGAGGAGGAGGGCCGGGTGCAAGCACCGGCGCGCGCGGGCGGAGGTGGTCCTCGA
GGGGTGGGCCAAGCGGATGGGCCTCGCGCCGGGAACGGCGCGCCGGCGGGCGGCCAGGGCCGCGGGCGCGCTCCGGGCGC
TGGGCCGTGGCGTCTCCGCCTCCCGCGTATCCCTCCGCGTCGCGATGGCCGCCGCGCTCTGGTCGGAGGTCGCCGGATCC
GGCTGCGCGGAGGCCGCGCTGCTCCGCCGGCTGGAGGCAAGCTCGCACGTGCCGGCGAGGCTGGTGGTCACGGTGGCGTC
GTGGATGGCACGCACCGCGGTCCGGGCCCCCGCCCCTGCCCCCGCCGTGGAGGGCTGGGCCGAGTGCTCCTGAGCCACGG
GCTCCGGCCCGGGCCCATCTCCCTCCCGTCGACGTGCCGAAC----AAGGAAGAAGGAAGCAAGCCTGAGATAGAATTAC
ACGTAGAATGTAACATGTGAAGCAAAGTTCGTTTGTTTAATTTTCCCCACCTTATTCTAAGCACGATTATACATATTA--
----------------------------TTCTTGTTAATATTCCTTCATCATGAATTCATCATCATGGCGGCAAAAGATC
TTCTCATTTTATTTTTTTGGTTTTCCGGATGGTGGC-------AAAAGATCTTGTGGTTAGGAGGGGCGAGGCGAGGTCC
AGACCCGAATGGACGGGAGTCTTTT-GACTGTCTGTGCGTGATGATTAAATAGAGTAACTAAAGTTGATTTTGGTTAAGA
CCTATGTG-GTGGAAGAATGTCGACGATACCTTCCTTGCTGGCGTCCGTTGGCTTCGCGCGTCGTGTGCGTTCGATTGGT
GGCTGTCGACGTTAATCTCTTCTAACCACACATCGCCGCGGCGTACTTGTTTTTGTTCAGGAAAGGGATCGAGCTCCTGG
TTCCGGCTGACCTCGTCGGTCGC----TGTCTGTCATCCCCCTCGCC------TCGCCGTCGCCATCGGTTTTGAGTAAG
TGCATGCACACAC--CGTCCTCCCAGAGAGCGAGTGTGGACCTGGTACTCTGTAC-------TGGTGGTGGTAGAGCTTG
CCGTGAATA-----------------------------------------------------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------S-------------S---
-------------S-S----------SS--------------------S-------------------------------
-------------------------------------------------------------------S------------
------S-------------------------------------------------------------------------
------------S-------------------------------------------------------------------
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-----------------------------------------------------S-----------------------S--
------------------------S-----------S----------------------------------------S--
---------------------------------S---------------------------------S------------
------------------S----S--------------------------------------------------------
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--------------------------------------------------------------------------S-----
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---------------------------S----------S-----------------------S-----------------
---------------------S-----------S--S--S-----------S--S-------------------------
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-----------------------------------------------------------------S--------------
------------------S---------S---S---------S-----------------------------------SS
------------------------------------------SSSS----------------------------------
---------------------------------------------------------------------------S--SS
SSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------------S-S------------------------
-------------------S--SS---------S-----S----------------------------------------
---S---------------------S---S--------------------------------------------------
----S--SS------------------------------------------------S----------------------
-------------------S------------------------------------------------------------
----------------------------------------------------------------------------S---
-------------------------------------------------------SSSSSSS------------------
---------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_256
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----------------------------------------------------------------------------GGAG
AAGGGAAAAGGAGGCC----------------------------------------------------------------
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>reverse_1723
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------------------------------------------AAGGAAGGAAGGAAGCGAGC------------------
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