>input_sequence_72551
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----------------------------------------ATGCAACAAAAACCGAAAGCGCCAGAAATATTACAGTACG
CAACCCTCG--C--CTCGCACAATCCTCACTCG----TCTATCCGTTCCTCCACCTCTCGTTGCTCGGGCTCCCTATCCT
GCACTCCTCTCCCGCGCGCCCACCACCTGTTCGACCCGACGCCCCGCCCCTCCACACGCGCCCCACATTCCAGTCGC---
-TCGCCGCCAATGGCAACGACCGCCGCGGCCATGGCACCCC------CCTCCACCTCCGCCTCCTCGGTCCTCCTCCTTC
GCCGCCTCCCTTCCCCGACCTCCGCGGCCCCCGGCTGCTGCCGCCTCGGCCCGCCGCCCCGCCTCCGCACGGCCCGCCCG
CGGGTCTCCCTCACCAGCGACGTCTCCTCCTCGTCCGACGTGGCCGAGGAGGAGGCCGAGCACGCGCCCAAGGTCGGCAG
GCGCGTGCGCGTCACGGCGCCCCTCCGCGTCTACCACGTCGTCAAGGCGCCCGACCTGGACATCCAGGGCATGGAGGGCG
TCATCAAGCAGTACGTCGGCGTCTGGAAGGGCAAGCGCATCACCGCCAACTTCCCCTTCAAGGTCGAGTTCCAGCTCACC
GTCGACACGCAGCCCAAGCCGGTCAAGCTCTTTGTCCACCTACGCGAGGACGAGTTCGAGTACATCGGCGACGAATGA--
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>chr6B_1_TraesCS6B01G263600
CGCTGTTGCATGCTAAAGACTGTCTGCTGCAGCAGAGATTATCGAAAAAGTCTTGTATAGTCGTCGTGTATCTAGTGTGT
AGCTACAATGTGTGTTGGCATGCCAAGCTAGGACCATTCTAGTTGAACCTTGAGAAATGCTTGGTAGGCTGTTGCTGCTG
GAATC--TCAGGTTTCTGTGATGCTCCTTTTGTGCCGTAATGAAAAGTTCATCTGCCGTCAGCCATTTCAGTAAGCACAC
ACTTTTCATGTTTTAGCACAAGCTTACGTAGATTCTTTGCACTTTGTGTACAAAATGACTTCTCCTTTCGGTGCTGTTTG
TTTCGGCGTAGAATTGCAAAACCGTTTCTTGATCTAATCTTATAGTATCCAATGTGTTTCGTTGCTGTGGATAATTAAGT
TGAGGATGTGTGAACACCAACATGACAGGACAATTTCTTAGCAGACCTGATTTGTAGGAACAATTATACGAACCATTTGG
AGCTTACT---------------GAATTTCTAGATATTAGAAATGGCTCCTGGGAGCAACTTTTTTTTAGAAATGCTAAA
AAAGGGTT---TTTGTACATGTATTTATTCTTGTCCTTTCATTAAGTTGTAC------------------TAAAG-----
ACAATTAATATGGATCGGAGGGAGTAGAAAAACACC--------------------------------------------
---------------------------------------AGTATTGTGGCCTGTGCTAAGAAAACAAGTTTATAGTGCTT
-AAAAATGATTTTACAGCACTGGATTTTGTTTTTTCCC-GAT-CAAAACATATGACATTTCT------------------
---TTGTTACATTTTATAATCAGTCAGAAGACATGAACATGTATGTTGTCAAACAAATTCATTTTTTTCTACTTTTAAAT
ATG--CCTTTTACTGTTTGATGACTGCGGAGCCAAGGCGTCAGCCCCACGAATTTCACAATTCTTTGCTTATGAATTTCA
CGGTCTGTTGAGTATTTCGTCATCATTTGCACCGTTTTCTGAGGTTGATAACAGCCCTCGGAAGC-------TTACGATA
ACAGAGCTAGTACAAAATTCTGGACGTTTCCGAAGCC-GGATGCAACAAAAACCGAAAGCGCCAGAAATATTACAGTACG
CAACCCTCG--C--CTCGCACAATCCTCACTCG----TCTATCCGTTCCTCCACCTCTCGTTGCTCGGGCTCCCTATCCT
GCACTCCTCTCCCGCGCGCCCACCACCTGTTCGACCCGACGCCCCGCCCCTCCACACGCGCCCCACATTCCAGTCGC---
-TCGCCGCCAATGGCAACGACCGCCGCGGCCATGGCACCCC------CCTCCACCTCCGCCTCCTCGGTCCTCCTCCTTC
GCCGCCTCCCTTCCCCGACCTCCGCGGCCCCCGGCTGCTGCCGCCTCGGCCCGCCGCCCCGCCTCCGCACGGCCCGCCCG
CGGGTCTCCCTCACCAGCGACGTCTCCTCCTCGTCCGACGTGGCCGAGGAGGAGGCCGAGCACGCGCCCAAGGTCGGCAG
GCGCGTGCGCGTCACGGCGCCCCTCCGCGTCTACCACGTCGTCAAGGCGCCCGACCTGGACATCCAGGGCATGGAGGGCG
TCATCAAGCAGTACGTCGGCGTCTGGAAGGGCAAGCGCATCACCGCCAACTTCCCCTTCAAGGTCGAGTTCCAGCTCACC
GTCGACACGCAGCCCAAGCCGGTCAAGCTCTTTGTCCACCTACGCGAGGACGAGTTCGAGTACATCGGCGACGAATGAGA
CCACTGTACCTACCTCTCTGTAACAA--CTGTACATGGCCAAGTAAGCCGACCGCCTTCCTCATATACAATAATAATGGC
CGCAGCGTAGGCGTGTGTATATTGTTCCGGTGGA--------------TGTGTGTGTGAGTGGTGAGAGGGATGAAGGCT
GAAGAGGGTTGGAATTAGGAACGCATGACCAGGAAGTTGATTGCTTGCTTGCTGTCGTTCCCTTGTTCCTCCTCTAATTC
AACATCTATTTTTTCTCAGATGTGCGGAATTGTTTGGATCATAATC---GATAGTTCTAAAATAACACCGATAATTTTGC
TCTTCCTTGCAGCCAATGCTTGATAATTTTGTTCCAAGAGCTTATCTTAATCTGACTGGTATAATCACATTGTTGCTTCT
AGGAATATGTAT-CCTTTATATATTGAATCTAGGCTATTTTT-ATAATTTATATAAGATATTTTCTGTTATGAGGGAATT
CGATTAGGCAATAAGTATCTTGTTTTTGGACAATACGACAAGTG-TTTGGAGTGTAATGCTATATATACATCAATG----
-----TATATATTTTGGTCTTACTGTAACCCTGTGAACTTGAACTTGGATGGCTAAAGTTCGTCTGAATTTGGAT-----
-------------ACAAGAACATTCATGAAATAACTTCTCTAAACCCAACTTGTTGCTTGTAGAGTGAACAAACAGCTAA
GGCTCTAAGGTAGGTTCCTGGCTGACCATAGGTAATCCTAAAATTTAGTTGCTTCCTTTCATCATCAATCTACGGTACTA
TATACTTTCAGTGGAATG-----TTCCGAGTAACCTCATAGAGTTCTTTATACCAGCTCATACTTCCACATTGAATAACA
ATGTAAAACAGCACATTGGACAGATTTATATC-ATATTCTTCTAAGAGAAATATATGCAGCCATACTGTACCTAGTTAAT
AAACTTACCCCTGAGCC-------------------TGGCTTATTATATAGAGAAGGCAATGCGAAGGTACCGTGCAGAG
GCTAGGCCTTGGATGCGGGTAGGCAGAGTGCG
>chr6A_1
CGCTGTTGCATGCTAAAGAGTGTCTGCTGCAGCAGAGATTATCGG-AAAGTCTCGTATAGTCGTCGTGTATCTAGGGTGT
AGCTACAATGTGTGTTGGCATGTCAAGCTAGGACCGTTCTAGTTGAACCTTGAGAAATGCTTGGTAGGCTGTTGCTGCTG
GAATCACTCAGGCTTCTGTGATACTCCTTTTGTGCCGTAATGAAAAGTTCATCTGCTGTCAGCCGTTTCAGTAAGCACAC
ACTTTTCCTGTTTTAGCACAAGTTTATGTAAATTCTTTGCACTTTGTTTACAAAATGACTTCTCCTTTTGGTAGTGTTTG
TTTCGGCGTAGAATTGCAAAACCGCTTGTTGATCTAATCTTAA--TATCCAATGTGTTTTGTTGTTGTGGATAATGAAGT
TCAGTATGTGTGAGCAAGAACATGACAGGACAATTTCTTACCAGGACTGATTTGTAGGAACAATTATATCTTCTCAAACT
ATTCACAGTCGACATGAGCTTAAGAAATTCTAGATATTAGAAATGGCTCCTGGGAGCAT-TTTTTTAAACAAATGCCAAG
AATAC-TT---TTTTTACATGTATTTGTTCTTGCCCTTTCAGTTGCTTGTAAATATTCACAAAGTTGTACTAAAGCAACG
GCAATTAACATGGATCGGAGGGAGTAGAAAAGCAA---------------------------------------------
---------------------------------------AGTATTGTGACCTGTGCTAAGAAAACAAGTTTATAGTGCTT
AAAAAATGATTTTACAGCACTGGATTTTCTTTTTTCCCAGAT-CAAAACATATGACATTTCTGTGCTTTAGCAAAACTGT
TCTTTGTGACACTTTATATTCAGTCAGAAGACACGAACATGCATGTTGTCAAACGAAGCCATTTTTTTTTCCTTTTAAAT
ATACTCCTTTTACTGTTTGAG---TGCGGAGCCAAAGCGTCACCCGCATGAATTTCACAATCCTTTGCTTATGAATTTCA
CGGTCTGTCGAGTATTTCGTG-TCAGCTCCACCGTTTTCTGAGATTGATAACAGCCCTGGGAAGTGGGAAGTTTACGATG
ACGGAGC---TACAAAATTCCGGACGTTTCCGAAGCCCGGATGCAACAAAAACCGAAAGCGCCAGAAATATTGCAGTACG
CAACCCTCTCTCGCCTCGCACAATCCTCACTCGCTCGTCTATCCGTTCCTCCGCCTCTCGTTGCCCGGGCTCCCTATCCT
GCACTCCTCTCCCGCGCGCCCACCACCTGTTCGACCCGACGCCCCGCCCCTCCACACGCGCCCCACATTCCAGTCGCTCG
CTCGCCGCCAATGGCAACGACCGCCGCGGCCATGGCGCCCCCCTCCACCTCCACCTCCGCCTCCTCGGTCCTCCTCCTCC
GCCGCCTCCCCTCCCCGGCCTCCGCCGCCCAGCGCCGCTGCCGCCTCGGCCCGCCGCCCCGCCTCCGCGCCGCCCGCCCG
CGGGTCTCCCTCACCAGCGACGTCTCCTCCTCGTCCGACGTGGCCGAGGAGGAGGCCGAGCACGCGCCCAAGGTCGGCAG
GCGCGTGCGCGTCACGGCGCCCCTCCGCGTCTACCACGTCGTCAAGGCGCCCGACCTGGACATCCAGGGCATGGAGGGCG
TCATCAAGCAGTACGTCGGCGTCTGGAAGGGCAAGCGCATCACCGCCAACTTCCCCTTCAAGGTCGAGTTCCAGCTCACC
GTCGACACCCAGCCCAAACCGGTCAAGCTCTTCGTCCACCTACGCGAGGACGAGTTCGAGTACATCGCCGACGAATGAGA
CCACTGTACCTACCTCTCTGTAACAA--CTGTACATGGCCAAGTAAGCCGACCGCCTTCCTCATATACAATAATAATGGC
CGCAGCGTAGGCGTGTGTATATTGTTCCGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGAGAGGGATGAAGGCT
GAAGAGGGTTGGAATTAGGAACGCATGACCAGGAAGTTGATTGCTTGCTTGCTGTCGTTCCCTTGTTCCTCCTCTAATTC
AACATCTATTTTTTCTCAGATGTGGGGAATTGTTCGGATAATGATGATTGATAGTTCTAAAATAACACAGAT-ATTTTGC
TCTTCCTTGCAGCCTATGCTTGATAATTTCATTCCAAGAGCTTCTGTTAATCTGATTGGTATAATCACATTGTTGCTTCT
AGGAAACGTGTCCCCTTCATTTATTGAATCTAGGCTATTTTTTATAGTTTATAAAACATATGTTCTTTTATGAGGGAGTT
CGGTTAGGCAACAAGTATCTTGTTTTTGGCCAATACGATAAGTG-TTTGGAGTGTAAGGCTATATATACATCGATG----
-----TATATATTTTGTTCTTACTGTAACCCTGTAAACTTGAACTCAGATGGCTAAAGTTCGTCTGAATTTGGATGGTCT
ATGTTGTATAAATACAAGAACATTCTTGAATTAACTTCCAAA--------TTGTGGCTTGTAGAGTGAACAAACAGCTAA
GACTCTAAGCTAGGTTCTCGGTTGACTGTAGGTAGTCCTAAAATTTAGTTGCTTCCATTCATTAT-AATCTATGGTATTA
TATACTTTCAGTGGAATG-----TTCAGAGTAACCTCATAGAGTTCTTTATATCAGCTCATACTTCCCCATTGAACAACA
ATGTGAAACAGCACATTGGACATATTTACGTCAATATTCTTCTAAGAGAAATGTATGCAGCCATACTGTACCTAGTT-AT
GAACTTACCCTGAGCCTGAGGCACCCTACTACTTGGTGGCTTATTATATGGACAAGACAATGCGAAGGTACCGTGCAGAG
GCTAGGCCTCAGACGTGGGTAGGCAGAGTGC-
>chr6D_1
CGCTGTTGCATGCTAAAGACTGTCTGCTGCAGCAGAGATTATCGAAAAAGTTTCGTATAGTCGTCGTGTATCTAGTGTGT
AGCTACAATGTGTGTTGGCATGCCAAGCTAGGACCATTCTAGTTGAACCTTGGGAAATGCTTGGTAGGCTGTTGCTGCTG
GAATCACTCAGGTTTCTATGATACTCCTTTTGTGCCGTAATGAAAAGTTCATCTGCCGTCAGCCATTTCAGTAAGCACAT
ACTTTTCGTGTTTTAGCACAAGCTTACGTAAATTCTTTGCACTTTGTGTACAAAATGACTTCTCCTTTTGGTACTGTTTG
TTTCGGCGTAGAATTGCAAAACCGTTTCTTGATCTAATCTTAA--TATCCAATGTGTTTTGTTGCTGTGGATAATTACGT
TCAGGATGTGTGAACACCAACATGACAGGACAATTTCTTAGCAGACCTGATTTGTAGGAACAATTATACGAACCATTCGG
AGCTTACT---------------GAATTTCTATATATTAGAAATAGCTCCTGGGAGCAACTTTTTTTTAGAAATGCCAAA
AATAT-TGGGTTTTTTTCATGTATTTATTCTTGTCCTTTCATTAAGTTGTAT------------------TAAAGCAGCG
ACAATTAACATGGATCGGAGGGAGTAAAAAAACACAAGTACTCCCTCCGTAAAGTAATATAAGAGCGTTTAGATGACTAT
TTTAGTGATCTGAATACTCTTATATTTCTTTACAGAGGGAGTATTGTGACCTGTGCTAAGAAAACAAGTTTATAGTGCTT
AAAAAATGATTTTACAGCACTGGATTTTGTTTTTCCCA-GATCCAAAACATATGACATTTATGTGCTTTAGCAAAACTGT
TCTTTGTGACACTTTATAATCAGTCAGAAGACACGAACATGTATGCTGTCAAACGAAGTCATTTTTTTATACTTCC---T
ATGCTCCTTTTACTGTTTGAG---TGCGGAGCCAAAGCGTCACCCGCAGGAATTTCACAATTCTTTGCTTATGCATTTCA
TTGTCTGTTGAGTATTTCGTGATCAGGTGCACCGTTTTCTGAGATTGATAACAGCCCCGGGAAGC-------TTACGATG
ACAGAGC---TACAAAATTCCGGACGTTTCCGAAGCCCGGATGCAACAAAAACAGAAAGCGCCAGAAATATTACAGTACG
CAACCCTCG--CGCCTCGCACAATCCTCACTCGCTCATCTATCCGTTCCTCCACCTCTCGTTGCCCGGGGCTCCTATCCT
GCACTCCTCTCCCGCGCGCCCACCACCTGTTCGACCCGACGCCCCGCCCCTCCACACGCGCCCCACATCCCAG----TCG
CTCGCCGCCAATGGCAACGACCGCCGCGGCCATGGCGCCCC------CCTCCACCTCCGCCTCCTCGGTCCTCCTCCTCC
GCCGCCTCCCCTCCCCGGCCTCCGCCGCCCCCCGCTGCTGCCGCCTCGGCCCGCCGCCCCGCCTCCGCACGGCCCGCCCG
CGGGTCTCCCTCACCAGCGACGTGTCCTCCTCGTCCGACGTGGCCGAGGAGGAGGCCGAGCACGCGCCCAAGGTCGGCAG
GCGCGTGCGCGTCACGGCGCCCCTCCGCGTCTACCACGTCGTCAAGGCGCCCGACCTGGACATCCAGGGCATGGAGGGCG
TCATCAAGCAGTACGTCGGCGTCTGGAAGGGCAAGCGCATCACCGCCAACTTCCCCTTCAAGGTCGAGTTCCAGCTCACC
GTTGACACGCAGCCCAAGCCGGTCAAGCTCTTCGTCCACCTACGCGAGGACGAGTTCGAGTACATCGGGGACGAATGAGA
CCACTGTACCTACCTCTCTGTAACTGTCCTGTACATGGCCAAGTAAGCCGACAGCCTTCCTTATATACAATAATAATGGC
CGCAGCGTAGGCGTGTGTATATTTTTCCG----------------------GTGTGTGCGTGGTGAGAGGGATGAAGGCT
GAAGAGGGTAGGAATTAGGAACGCATGACCAGGAAGTTGATTGCTTGCTTGCTCTCGTTCCCTTGTTCCTCCTCTAATTC
AACATCTATTTTTTCTCAGATGTGGGGAATTGTTCGGATAATGATGATTGATAGTTCTAAAATAACACCGATAATTTTGC
TCTTCCTTGCAGCCTATGCTTGATAATTTTATTCCAAGAGCTTCTCTTAATCTGATTGCTATAATCACATTGCTGCTTCT
AGGAATATGTAT-CCTTTATTTATTGCATCTAGGCTATTTTTT-TAATTTGTAAAATATATGTTCTGTTACGAGGGAATT
CGGTTAGGCAACAAGTATCTTGCTTTTGGACAACACGATAAGATTTTTGGAGTGTAATGCTATATATACATCGATTTATA
TATTTTATATATTTTGTTCTTACTGTAACCCTGTGAACTTGAACTTGGATGGCTAAAGTTCGTCTGAATTTGGAT-----
-------------ACAAGAACATTCATGAAATAACTTCTCTAAATCCATCTTGTGGCTTGTAGAGTGAACAAACAGCTAA
GGCTCTAAGCTAGGTTCTTGGCTGACCATAGTTAATCCTAAAATTTAGTTGCTTCCATTCATCATCAATCTATGGTACTA
TATACTTTCAGTGGAATGGAATGTTCCGAGTAACCTCATGGAGTTCTTTATATCAGCTCAAACTTCCACATTGAACAACA
ATGTAAAACAGCACATTAGACAGCTTTACATCAATATTCTTCTAAGAGAAATATATGCAGCCATACTGTACCTAGTT-AT
AAACTTACCCTGAGCCTG--------------------------------------------------------------
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>SNPs
-----------------------------------------------------S--------------------------
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----------------------S---------------------------------------------------------
-------S----------------------S-------------------------------------S---S-------
------------------------------------------SSS--------------S--------------------
-S---------------------------------------------------------------------------S--
----------------------------------------------------------------------------S---
--SSSS--------S------------------------------------S----------------------------
--------S--------------------------S--------------------------------------------
------------------------------------------------S-------------------------------
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-------S---S---------------------S--------------------S--S----------S-----------
--------------------SSSS-----------S------S--S--S-------------------------------
--------------------S----SS----------------S--------------S--------------------S
-------SSS----------S-----------------------------------------------------------
----------------------------------------------------------------S---------------
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------------------------------------S-----------------------------------------S-
----------S------S-------S------S-----------------------------------------------
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--------------------------------S-----------------------------------------------
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--------------------------------SS------------------------S---------------------
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------------------------S---------S----S--S--S----------------------------------
--------------S---------------S------------S-----------S------------------------
--------------------S--------------------------------S--S----S------------------
--S--------S--------------------------S---------------------------------S-------
----------------S---------------------------------------------------------------
--------------------------------------------S---S-----S-------------------------
---------S-------S--------------------------------------S---------------S-------
----------------------------------------------------S----------------------S----
----------------------------S------------------------------------------------S--
----------SSSSS-S--------------------------------S--S---S-----------------------
---------SS--S-S---------------S
>forward_1120
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------------------------------------------------------------GCCCTCGGAAGCTTACGATA
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>reverse_2850
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-------------------------------------------------AGAGAAGGCAATGCGAAGGT-----------
--------------------------------
