>input_sequence_72484
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------ATGACGACCATGGTTGCCTTGAGCTCCTTCGCCGGCGCCACCGTCGTCGGCCGCCCCG
CCTCCTGGTCTCCGGCACTG---CCGCGTCGGCGCGCCCTCCTCGTCAGGGCCCAGACCGAGGTAAGCCTCTTTTGCCTA
ACTGACTCTGCCATCATAACTTGCTTACTCTGAA----------------CAAGTTTG-AACTGGCTGTACTGACTCACG
ATGCTT------TGCAGCCGGATATCGAGTCGACCA---AGGAGACGA---CGAGCGCATCGACATCCTCC---CCAACC
CCAACCCCGACCCCAAG------------CCCGGTGGTGCCCAAGCCCAAGCCC---AAG------GCTAACCCCTCGGT
CTGGGACGCGCTCGCGTTCAGCGGCCCAGCGCCCGAGCGCATCAACGGCCGGCTCGCTATGGTGGGCTTCGTGGCGGCGC
TCTCCGTCGAGGCAGCGCGCGGCGGCGGGCTACTCGACCAGGCCGGCAGCGGCGCCGGGCTGGGATGGTTCCTGACAACC
GCTGCGGTGTTCTCGGTGGCGTCGCTGGTGCCGCTCCTTCAGGGCCAGAGCGTGGAGAGCAAGTCCAGCGGCGTATGGAG
CGCCGACGCCGAGCTATGGAACGGCCGCTTCGCCATGCTCGGCCTCGTCGCACTCGCCATCACCGAGTTCATCACCGGCA
CGCCTTTCGTCAACGTCTGA------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------
>chr4A_1_TraesCS4A01G067500
TGATATGTTTAGCACTTGGGTTGGCCCAATCGTGCTTCAGTCCTGTTGATGCTGAAGCACCCTGTGATATAGTATACCTC
CACATGTAAGTTATTCTTTGTTCCAGACTTCCAGTGTCATATCTTTCTGTTGCTCCGTTTCCCCCCATTTTGTTGTGTTC
ATTATTTTAGTCGTTGTGGGAAGTGGTGTCTTGAGCCGAACTGATCATGTAGATCCTTTCCCCTTTTATGCTCTTGGTTT
TCTGCATTGGGAGCGTGTATG-TTACAAGATGATTAAATTATATGCCTTAGTATATA--GTTCACCAAGTTATTGAGCAG
TTCGTTCTGCTTTGGGAAATGTTTGTAACTGCCGCTGTCCGAAGCACAGGAAGCT----CATTGTGTTATACATTTCATT
AACTTTTGATTGGCATCAGATGGTTC----------------TAGAAACTTAATTCTCCGATGAACAAACCCGTACCATG
CTTTGACCCGCATCTACGTACATAGTAGTACTCCAGTTAATTGTATCTGCCGTGAGAGGCTGCCATTTTTTAAACACGAG
ACTGCCGACACTAAAACATCTTGGTAGC--CCTTTGTCATCGTGTCTCTGGAATAGAGCCAACGCTCTACGCAGGCCTGC
GTGTCTCTCTAATGGCTTCTCGTTATCTCGCGCCAAAAGACCTAAGCCCGGGCACAAGTATCTCCGCGTGCCCGGCACTT
TCTGGAGTCTTCCGCGGTCCGTGGAGTACACTTGTGCCACTTT--TTCTGGCACCTTTTGTCGAG-------CTCCGGAG
GCCA-CTCCATGGTGCCCTGGACGTCCACGTCGTGACC--GCTCTCGTTGCACGCAC-ACTTCTACACGTTCACGGCTGG
GGAGTGCCCGCCGCCG------------CGGCCACCCCC-TCGCGGCCGGGCTAGCTCGTCCTCCCCGGG-CCTATAT--
AATCGCACGCTCGTCATTGGCATCAGCACGCAATAATCAC-------AGTCC-ACAACGAACCAAGTGTGATCTAGCCAG
TCCCTGCATCCTGCTGGGAGTAATGACGACCATGGTTGCCTTGAGCTCCTTCGCCGGCGCCACCGTCGTCGGCCGCCCCG
CCTCCTGGTCTCCGGCACTG---CCGCGTCGGCGCGCCCTCCTCGTCAGGGCCCAGACCGAGGTAAGCCTCTTTTGCCTA
ACTGACTCTGCCATCATAACTTGCTTACTCTGAA----------------CAAGTTTG-AACTGGCTGTACTGACTCACG
ATGCTT------TGCAGCCGGATATCGAGTCGACCA---AGGAGACGA---CGAGCGCATCGACATCCTCC---CCAACC
CCAACCCCGACCCCAAG------------CCCGGTGGTGCCCAAGCCCAAGCCC---AAG------GCTAACCCCTCGGT
CTGGGACGCGCTCGCGTTCAGCGGCCCAGCGCCCGAGCGCATCAACGGCCGGCTCGCTATGGTGGGCTTCGTGGCGGCGC
TCTCCGTCGAGGCAGCGCGCGGCGGCGGGCTACTCGACCAGGCCGGCAGCGGCGCCGGGCTGGGATGGTTCCTGACAACC
GCTGCGGTGTTCTCGGTGGCGTCGCTGGTGCCGCTCCTTCAGGGCCAGAGCGTGGAGAGCAAGTCCAGCGGCGTATGGAG
CGCCGACGCCGAGCTATGGAACGGCCGCTTCGCCATGCTCGGCCTCGTCGCACTCGCCATCACCGAGTTCATCACCGGCA
CGCCTTTCGTCAACGTCTGAAACTAGTTAGTGTAGTGCAGTACGCTTGCACGTGCATGTACATATTTGTTGGTCATGCTG
AGGAACTAGG---ACTACGGACCACGCGACAAGCGTGGTAAAAGCAATCTCAAATTGACAAAAAAAAACTAGGACTACGG
ACTCTGACATTCTGTAAGCCGTATCATTAGGTTGTCTTTC-TTGGTGATGATGTCTTGGAGCCTACAATTAATGCAGGAG
TGAATTGCGTCCATGCTAATACTCCCATTCTACCAAGACGCTTGCGTATTTTAAGATTCAATTTTGATCATCAATTAGAC
GAGCAA--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------TATATAAATTTTGGGACT
TCAAATTTATACCATCAAAAAGTTATTCAAATACGAATTCAACGGTATAACTTTTGTCTACATAACCCACATTTTCTTGG
TCAAACCGACGGTTGAACTTACCCAGCCCTTACCCATTCCGTTCAAGCTTATCCACCAGGTAAATGGGTACCCGTGGATA
AAAATATTCATGTTTGAATAACATCAATTTGAATGAAACGTAATCATAAACAACAACATACAATCATAATTTATAAACAA
CACATAATAATATTGATACATACTTATAAACAACAACCCATCATAAACACAACACATTTTATAAACATCAACACTTCCTT
GTAAACAACAGCACATCGAAGCATGAAAACAGTCATAAATAGTAGCACATAGTCATACACTTTAAATTCACAAACTCACG
ACAAAGGGTAGATGCAATTTTTCCGTACTTGTTAGAATTTATAAGGGTACATGGGTATGCCAGGATGGGTTATATGATCT
CGTACCCGTACCCACTCTACCCGATGGGTTTGAGATTTCCCTTTTTACATACCCATGGGTAACTTTTTGTCCCATACCCT
TACCCTAATAGGGTTTTTACCCGCAGGGTACATGGGTAATGGGTACCCATTGCCATCCCTAGCCACCACATTCCTTGTGC
CTCCCAAAAATCCACCACTTTCCTTGTTATTTTTCTTAAT
>chr4D_1
TGATATGTTTAGCACTTGGGTTGGCCCAATCGTGCTTCAGTCCTGTTGATGCTGAAGCACCCTGTGATATAGTATACCTC
CACATGTAAGTTATTCTTTGTTCCAGACTTCCAGTGTCATATCTTTCTGTTGCTCCGTTTCCCCCCATTTTGTTGTGTTC
ATTATTTTAGTCGTTGTGGGAAGTGGTGTCTTGAGCCGAACTGATCATGTAGATCCTTTCCCCTTTTATGCTATTGGTTT
TCTGCACTGGGAGCGTGTATGTTTACAAGATGATTAAATTATATGCCTTAG--TATA--GTTCACCAAGTTATTGAGCAG
TTCGTTCTGCTTTGG---ATGTTTGTAACTGCCGCTGTCCGAAGCACAGGAAGCTTCAGCATTGTGTTATACATTTCGTT
AACTTTTGATTGGCATCAGATGGTTCTGGTTCAGTTCGAGTGTAGAAACTTCATTCTCCGATAAACAAACCCGTATCATG
CTTTGACCCGCATCTACGTACATAGTAGTACTCCAGTTAACTGTATCTGCCGTGAGAGGTTGCCATTTTT-AAACACGAG
ACTGCCGACACTAAAACATCTTGGTAGC--CCTTTGCCATCGTGCCTCTGGAATAGAACCCACGCTCTACGCAGGCCTGC
GTGTCTCTCTAATGGCTTCTCGTTGTCTCGCGCCAAAAGACCTAAACCCGGGCACAAGTATCTCCGCGTGCCTGGCACTT
TCTGGAGTCTTCCGCGGTCCGTGGAGTACACTTGTGCCACTTT--TTCTGGCACCTTTTGGCGAG-------CTCCGGAG
GCCCTCTGCATGGTTCCCTAGGCGTCCACGTCGTGGCCCAGCTCCCGCTGCCTT-ACAACTTCTACACGCTCACGGCTGG
GG-GTGCCCGCCGACGTGGCCACCGCCGCGGCCACC-CCCTCATGGCCGGGCTAGCTCGTCCTCCCCGGG-CCCTATATA
AAACGCACACTCGTCATCGGCAACAGCACACAGTCACCAGTCACCAGAGTCC-ACAACGAAGCAAGTGTGATCTAGCCAC
TCCCTGCATCCTGCTGTGAGTAATGACGACCATGGTTGCCTTGAGCTCCTTCGCTGGTGCCACCGTCGTTGTCCGCCCCG
CCTCCTGGTCTCCGGCGCTG---ACGCGTCAGCGCGCCCTCCTCGTCAGGGCGCAGACCGAGGTAAGCCTGTTTTACCTA
ACTGACTCTGCCATCATAACTTGTTTACTCTGTA----------------CAAGTTTC-AACTGGCTGTACTGACTCACG
ATGCT------CTGCAGCCGGATATCGAGCCGACCA---AGGAGACGA---CGAGCGCGTCGACATCCTCC---CCAACC
CCAACCCC------AAG------------CCCGGTGGCGCCCAAGCCCAAGCCC---AAG------GCTAACCCCTCGGT
GTGGGACGCGCTCGCGTTCAGCGGCCCAGCGCCGGAGCGCATCAACGGCCGGCTCGCTATGGTGGGCTTCGTGGCGGCGT
TCTCCGTCGAGGCAGCGCGCGGCGGCGGGCTACTCGACCAGGCCGGCAGCGGCGCCGGGTTGGGATGGTTCCTGACGACC
GCAGCGGTGTTCTCGGTGGCGTCGCTGGTGCCGCTCCTTCAGGGACAGAGCGTGGAGAGCAAGTCCAGCGGCGTATGGAG
CGCCGACGCCGAGCTATGGAACGGCCGCTTCGCCATGCTCGGCCTCGTCGCACTCGCCATCACCGAGTTCATCACCGGCA
CGCCCTTCGTCAACGTCTGAAACTAGCTAGTGTAGTGCAGTACGCTTGCACGTGCATGTACATATTTGTTGGTCATGCTG
AGGAACTAGG---ACTACGGAC----------------------------------------------------------
--TCTGACGTTCTGTAAGCCTTATCATTAGCTTGTCTTTC-TTGGTGATGATGTCTTGGAGCCTACAATTAATGCAGGAA
TGAATCGCGTTCATGCTAATACTCCCATTCTACTAAGACGCTTGCGTATTTTAAGT---AATTTTAATCATCAATTAGAC
GAACAA--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------TATATAAATTTCGGGACT
TAAAATTTATACCATCAAAAAGTTATTCAAATACGAATGCAACGGTATAACTTTTGTC----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------
>chr4B_1
TGATATGTTTAGCACTTGGGTTGGCCCAATCGTGCTTCAGTCATGTTGATGCTGAAGCACCCTGTGATATAGTATACCTC
CACATGTAAGTTATTCTTTGTTCCAGACTTCCAGTGTCATATCTTTCTGTTGCTCCGTTTCCCCCCATTTTGTTGTGTTC
ATTATTTTAGTCGTTGTGGGAAGTGGTGTCTTGAGCCGAACTGATCATGTAGATCCTTTCCCCTTTTATGCTCTTGGTTT
TCTGCATTGGGAGCGTGTATGTC-ACAAGATGATTAAATTATATGCCTTAG--TATATAGTTCACCAAGTTATTGGGCAG
TTCGTTCTGCTTTGG---ATGTTTGTAACTGCCGCTGTCCGAAGCACAGGAAGCTTCAGCATTGTGTTATACATTTCGTT
AACTTTTGATTGGCATCAGCTGGTTCTGGTTCAGTTCGACTGTAGAAACTTCATTCTCCGATAAACAAACCCGTATCATG
CTTTGACCCGCATCTACGTACATACTAGTACTCCAGTTAATTGTATCTGCCGTGAGAGGCTGCCA-TTTT-AAACACGAG
ACTGCCGACACTAAAACATCTTCTTGGTAGCCTTTGTCATCGTGCCTCTGGAATAGAGCCCACGCTCTAAGCAGGCCTGC
GTGTCTCT--AATGGCTTCTCGTCATCTCGCGCCAAAAGACCGT------GGCACAAGTATCTCC---------GCACTT
TCTGGAGTCTTCCGCGGTCCGTGGAGTACACTTGTGCCACTTT--TTCTGGCACCTTTTGGCGAG-------CTCCGGAG
-CCCTGTGCATGGTTCCCTGGACATCCACGTCGTGTCCCAGCTCTCGCTGCAGGCACAATTTCTACACGTTCACGGCTGG
GGAGTGCCCACCGACGTGGCCACCGCCGCGGCCACC-CC-TCGCGGCCGGGCTAGCTCGTCCTCCCCGGG-CCTATAT--
AATCGCACACTCGTCATTGGCATCAGCACGCAATAATCAC-------AGTCC-ACAACGAACCAAGTGTGATCTAGCCAG
TCCCTGCATCCTGCTGTGAGTAATGACGACCATGGTGGCCTTGAGCTCCTTCGCCGGTGCCGCCGTCGTCGGCCGCCCCT
CCTCCTGGTCTCCGGCGGTG---CCGCACCGTCGCACCCTCCTCGTCAGGGCCCAGACCGAGGTAAGCCTCTTTCGCCTA
ACTGACTCTGCCGTCATAACTTGTTTACTCTGTA----------------CAAGTTTC-AATTGGTTGTACTGACTCACG
ATGCTCTGCCTCTGCAGCCGGATATCGAGTCGACCA---AGGACACGA---CGAGCGCATCGACATCCTCC---CCAACC
CCAACCCC------AACCCCA------AGTCCGGTGGCGCCCAAGCCCAAGCCC---AAG------GCTAACCCCTCGGT
CTGGGACGCGCTCGCGTTCAGCGGCCCAGCGCCGGAGCGCATCAACGGCCGGCTCGCTATGGTGGGCTTCGTGGCGGCGC
TCTCCGTCGAGGCAGCGCGCGGCGGCGCGCTACTCGACCAGGCCGGCAGTGGCGCCGGGCTGGGATGGTTCCTGACAACC
GCGGCGGTGTTTTCGGTGGCGTCGCTGGTGCCGCTGCTGCAGGGCCAGAGCGTGGAGAGCAAGTCCAGCGGCGTATGGAG
CGCTGACGCCGAGCTATGGAACGGCCGCTTCGCCATGCTCGGCCTCGTCGCACTCGCCGTCACCGAGTTCATCACCGGCA
CGCCCTTCGTCAACGTCTGAAACTAGCTAGTGTAGTGCAGTACTCTTGTACGTGCATGTACATATTTGTTGGTCATGCTG
AGTAACTAGGAGCACTACGGAC----------------------------------------------------------
--TCTGACGTTCTGTAAGCCTTA------GGTTGTCTTTCTTTGGTCATGATGTCCTGGAGCCTACAATTAATGCAGGAA
TGAATCGTGTTCATGCTAGTACTCCCATTCTA---AGACGCTTGCTTGTTTTAAGTTTTAGTTTTGATCATCAATTAGAC
GAATAATACTCCCTCTCTCTTAATTTACAGGGCGTGCGCGTATCCCTAGGTCGTCAGTTTGACCAACTTAATACAAGTCA
TATATTATGAAAGTATATCAATATAAACTTCAGATGTTCTATTTTCAAACGATATAGTTTTTGTGTTATATAGTTTATAT
TAGGATGATAAAATTGGCAAGCTAGATATACGCGTATGACTTGTAAACTGAAACGGAGGGAGTATATAAATTTCGGGACT
TAAAATTTATACCATCAAAAAGTTATTCAAATACGAATTCAACGTTATAACTTTTGTCTTCATAACCCACATTTTCTTGG
TTAAACCGATGGTCAAACTTA-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------
>chr4A_717
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------TGGAGTTCACTTGTGCCACCTTTCTTCTGGCACGTTTTGGCGAG-------CTCCGGAG
GCCCTCTGCATGGTGCCCGGGACGTCCACGTCGTGCCCCGGCTCTCGCTGCACGCGCAACTTCTACACGTTCGCGGCTGA
GGAGTGCCCGCCGACGTGGCCACCGCCGCAGCCACCTCC-TCACGGCCGGGCTAGCTCGTCCTCCCCGCGTCCTACAT--
AAACGCACACTCGTCATCGGCAACAGCACACAGAATCAAC-------AGCCC-ACAACGAACCAAGTGTGATCTAGCCAC
TCCCTGCTTCCTGCTGTGAGTAATGGCGACCATGGTGGCCTTGAGCTCCTTCGCCGGTGCCGCCGTCGTCGGCCGCTCCG
CCTCCTGGTCTCCGGCGGTG---CCGCGCCGGCGCGCTCTCCTCGTCAGGGCCCAGACCGAGGTAAGCCTCTTTCG----
-----------------------TTTACTCCGT--ACTGTACGTACAACTCAAGTTTA-AGTGTGCTCTGCTGACTCACG
ATGCCCTGTCCCTGCAGCCGGATGTCGAGCCGACCA---AGGAGACGATGACGAGCGCATCGACATCCTCC---CCCAGC
CCCACCCC------AAGCCCGAGCCCGACCCCGGTGGCGCCCAAGCCCAAGGCC---AAG------GCTAACCCCTCGGT
CTGGGACGCGCTCGCGTTCAGCGGCCCGGCGCCGGAGCGCATCAACGGCCGGCTCGCCATGGTGGGCTTCGTGGCGGCAC
TCTCCGTCGAGGCGGCGCGCGGCGGCGGGCTACTCGACCAGGTCGGCAGCGGCGCCGGGCTGGGATGGTTCCTGACAACC
GCGGCTGTGTTCTCCGTGGCATCTCTGGTGCCGCTGCTTCAGGGACAGAGCGTGGAGAGCAAGTCCAGCGGCGTATGGAC
CGCCGACGCCGAGCTATGGAACGGCCGCTTCGCCATGCTCGGCCTCGTCGCACTCGCCGTCACCGAGTTCATCACCGGCA
CGCCCTTCGTCAACGTCTGAAACTAGTGTAG-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------
>chr4D_717
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------TGGAGTTCACTTGTGCCACCTTTCTTCTGGCACGTTTTGGCGAGCTCCGGACTCCGGAG
GCCCTCTGCATGGTGCCCTGGACGTCCACGTTGTGACCCCGCTCTCGCTGCACGCACAACTTCTACACGTTCGCGGCTGG
GGAGTGCCCGCCGACGTGGCCACCGCCGCAGCCACCTCC-TCACGGCCGAGCTAGCTCGTCCTCCCCGCGTCCTATAT--
AAACGCGCACTCGTCATCGGCAACAGCACACAGAAACAAC-------AGCCC-ACAACGAACCAAGTGTGATCTAGCCAG
TCCCTGCTTCCTGCTGTGAGTAATGGCGACCATGGTGGCCTTGAGCTCCTTCGCTGGTGCCGCCGTCGTCGGCCGCTCCG
CCTCCTGGTCTCCGGCGGTG---CCGCGCCGGCGCGCCCTCCTCGTCAGGGCCCAGATCGAGGTAAGCCTCTTTTCGTCG
CCTGACTCTGCCATCATATCTTGTTTACTCCGTATACTCTACGTATAAGTCAAGTTTCGAGTGTGCTGTGCTGACTCACG
ATGCCCT----CTGCAGCCGGGTGTCGAGCCGACCAAGGAGGAGACGA---CGAGCGCATCGACATCCTCC---CCGAGC
CCAACCCC------AAGCCCGAGCACGACCCCGGTGGCGCCCAAGCCCAAGGCC---AAG------GCTAACCCCTCGGT
CTGGGACGCGCTCGCGTTCAGCGGCCCGGCGCCGGAGCGCATCAACGGCCGGCTCGCTATGGTGGGCTTCGTGGCGGCGC
TCTCCGTCGAGGCCGCGCGCGGCGGCGGGCTGCTCGACCAGGCCGGCAGCGGCGCCGGGCTGGGATGGTTCCTGACAACC
GCGGCTGTGTTCTCCGTGGCGTCTCTGGTGCCGCTGCTTCAGGGGCAGAGTGTGGAGAGCAAGTCCAGCGGCGTATGGAC
CGCCGACGCCGAGCTGTGGAACGGCCGCTTCGCCATGCTCGGCCTCGTCGCACTCGCCGTCACCGAGTTCATCACCGGCA
CGCCCTTCGTCAACGTCTGAAACTAGCTAGTGTGTACTAGTACTCCTGTACGTGCGTGTACATA-TTGTTGGTCATGCTG
AGGAACTAGT---GGTACGGAC----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------
>chr4B_718
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------GGAGTTCACTTGTGCCACCTTTCTTCTGGCACGTTTTGGCGAG-------CTCCGGAG
G--CTCTGCATGGTGCCCTGGACGTCCACGTCGTGACCCGCCTCTCGCTGCACGCACAACTTCAACACGTTCACGGCTGG
CGAGTGCCCGCCGACGTGGCCACCGCCGCGGCCACCCCC-TCACGGCCGGGCTACCTCGTCTTCCCCGCGTCCTACAT--
AAACGCACGCTCGTCATCGGCAACAGCACACAGAATCAAC-------AGCCCAACAACGAACCAAGTGTGATCTAGCCAG
TCCCTGCTTCCTGCTGTGAGTAATGGCGACCATGTTGGCCTTGAGCCCCTTCACTGGTGCCGCTGTCGTCGGCCGCTCCG
CCTCCTGGTCTCCGGCGGTG---CCGCGCCGGCGTGCCCTCCTCGTCAGGGCCCAGACCGAGGTAAGCCTCTTTCG----
-----------------------TTTACTCCGT--ACTGCACGTACAACTCAAGTTTA-AGTGTGCTCTGCTGACTCACG
ATGCCTTGCCCCTGCAGCCGGATGCCGAGCCAACCAAGGAGACGACGA---CGAGCGCATCGACATCCTCC---CCTAGC
CCAACCCC------AAGCCCGAGCACGACCCTGGTTGCGCCCAAGCCCAAGTCCAAGGCTGCTAACGCTAACCCCTCGGT
CTGGGACGCGCTCGCGTTCAGCGGCCCGGCACCGGAGCGCATCAACGGACGGCTCGCTATGGTGGGCTTCGTGGCGGCGC
TCTCTGTTGAGGCGGCGCGCGGCGGCGGGCTACTCGACCAGGCCGGCAGCGGCGCCGGGCTGGGATGGTTCCTGACAACC
GCGGCTGTGTTTTCCGTGGCGTCTCTGGTACCGCTGCTTCAGGGACAGAGTGTGGAGAGCAAGTCCAGCGGCGTATGGAC
CGCCGACGCCGAGCTATGGAACGGCCGCTTCGCCATGCTCGGCCTCGTCGCACTGGCCGTCACCGAGTTCATCACCGGCA
CGTCCTTCGTCAACGTCTGAAACTAGCTAGTGTAGCAC-----TCCCGTACGTGCGTGTACATA-TTGTTGGTCATGCTG
AGGAACTAGT---GGTACGGAC----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------
>chr1D_996
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------GAGTAATGGCGACCATGGTGGCTTTGAGTTCCTTCGCCG---------TCGTCGGCCGGTCCG
CCGCCCGCTCTCCAGTGGCGGCCCCGCGCCGGAGGACCCTCGTCGTCAGGGCCCAGACCGAGGTGAGCTTTCACGTCACG
CACTTGACTGCATCGCATGTTGGCTAGTTCGAGACTCGACCTCAACGTGAGATTCTTTATG-------------------
----CAT----GTGCAGCCTGGCATGGACTCAACCA---AGGAGACAA---CGAGCGCATCGACCTCCTCCTCCCCGAGC
ACGAGCCC------GACCCCGACCCCGATCCCGGCGGCACCCAAGCCCATGGCCAAGAAG------GCTAACCCCTCGGT
CTGGGACGCGCTCGCCTTCAGCGGCCCGGCGCCGGAGCGAATCAACGGCCGGCTGGCCATGGTGGGATTCATGGCGGCGC
TCTCCGTCGAGGCGGCGCGCGGCGGCGGGCTCCTCGACCAGGCCGGCAGCGGCGCCGGGCTGGGCTGGTTCCTGGTGACC
GCGGGGGTGTTCTCCGTGGCATCGTTGGTGCCGCTGCTGCAGGGCCAGAGCGTGGAGAGCAAGTCCAGTGGCTTCTGGAG
CGCGGACGCCGAGCTCTGGAACGGCCGCTTCGCCATGCTCGGCCTCGTCGCGCTCGCCGCCACCGAGTTCATTACCGGCG
CTCCCTTCGTCAACATCTAAGACTACTT----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------
>chr1D_996
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------GAGTAATGGCGACCATGGTGGCTTTGAGTTCCTTCGCCG---------TCGTCGGCCGGTCCG
CCGCCCGCTCTCCAGTGGCGGCCCCGCGCCGGAGGACCCTCGTCGTCAGGGCCCAGACCGAGGTGAGCTTTCACGTCACG
CACTTGACTGCATCGCATGTTGGCTAGTTCGAGACTCGACCTCAACGTGAGATTCTTTATG-------------------
----CAT----GTGCAGCCTGGCATGGACTCAACCA---AGGAGACAA---CGAGCGCATCGACCTCCTCCTCCCCGAGC
ACGAGCCC------GACCCCGACCCCGATCCCGGCGGCACCCAAGCCCATGGCCAAGAAG------GCTAACCCCTCGGT
CTGGGACGCGCTCGCCTTCAGCGGCCCGGCGCCGGAGCGAATCAACGGCCGGCTGGCCATGGTGGGATTCATGGCGGCGC
TCTCCGTCGAGGCGGCGCGCGGCGGCGGGCTCCTCGACCAGGCCGGCAGCGGCGCCGGGCTGGGCTGGTTCCTGGTGACC
GCGGGGGTGTTCTCCGTGGCATCGTTGGTGCCGCTGCTGCAGGGCCAGAGCGTGGAGAGCAAGTCCAGTGGCTTCTGGAG
CGCGGACGCCGAGCTCTGGAACGGCCGCTTCGCCATGCTTGGCCTCGTCGCGCTGGCCGCCACCGAGTTCATTACCGGCG
CGCCCTTCGTCAACATCTAAGACGACGTAGTGTAGCGC-----TGT----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------
>SNPs
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------SS---------------------------
---------------SSS-----------------------------------------------------------S--
---------------------------------------------------S----------S------------S----
----------------------------------------------------------------------S---------
--------------------------------------------S---------------S-------------------
---------------------------------------------S--------------------------S-------
------------------------------------------------------------S-------------------
---S---S---------------------------------------S--------------------------------
-------------S------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------S----------------------------------------S----------------------
----------------S---------------------------------------------------------------
--------------------------------S------------------------S----------------------
--------------------------------------------------------------------------------
--------SSSSSS-----------------------S------------------------------------------
---------------------------------S----------------------------------------------
--------------------------------------------------------------------------------
--S-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
----S---------------------------------------------------------------------------
----------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SS------S-----------S----------------------------------------------------------S
-----S----S----------------------S---------------------S--S---------------------
--S-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------S------
-S---------------------------------------------------------S--------------------
-S-------S---SS------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_686
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------CTCGCGCCAAAAGACCTAAG----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------
>reverse_2424
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------CAGCCCTTACCCATTCCGTT-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------
