>input_sequence_72457
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-------------ATGGTATCCGCGACGACGATGCACCACCGGCGCCGCTCCATTCTCCAGCTGGCCCTCCTACTACTGG
CGGCGTCACCGGCGGCAATGCTGGCGGCCGGCGGAGCCTGCGAGAGAGAGGAGTTCCCGGCCGGCAGGAGCTACGCGACG
TGCGCGGATCTCCCTGCCCTCGGCGCCTCGCTGCACTGGACGTACGACGCGGCGGCCTCGTCGTTGTCCCTGGCATTCGC
GGCCAAGCCGCCCGGCGCGAGCGGCGCCGGCTGGGTGGCTTGGGGGGTCAACCCCACCGGCGATGGCATGAAGGGCGCGC
AGACGCTCCTCGCCTTCAAGAGCAAAGGCGCATACGTCGTCAACACGTACAACCTCACCGGGTACCGCCCGCTCAGCGCG
GCGTCCACGCCGATCGCGTTCGAGGCCACCGAGCTCGCCGCCGACGAGGGCGCCGACGGGAAGGTGCGGCTCTACGGCAC
GCTGCAGCTGCCCAAGGGCATGGAGGCCGTGAACCACATCTGGCAGGTAGGGTCGACGGTGGCCAATGGGGTGCCGGCCA
AGCACGCGTTCGCGCAGGAGAACCTCGAGGCGAAGGGCAGTCTTGTGCTCACCGGTGCCGGAGCGACGGAGGCCGCGCCA
GCTCCGGTGT----------------------------------------------------------------------
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----------------------------------------------------------------------TTATCTCTCA
CGACTATCTCGATTAA----------------------------------------------------------------
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>chr5D_1_TraesCS5D01G286100
CAGAC---------------------------------------------------------------------------
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----------------GAGATTATAACTTTATGTAATCTGGATTGTAAACCTCTGGTTAATTAAAAGTCCAATTCAGAGA
AGAAAAAA-GGTAGAAAACATGGGCGGCCGTGATGTTTGTAGCAAATCACCGCCCCGGAGTAGAAACGTCGGCACAGAGT
CACAG-AACACAAATCTCATACGCTCCTGACTAGGCCGAGGTTGGCCAACGTTCGATGGTCAGAACTGGAGCCGAAGAAC
CAAGACGTCCACCCACATTGTATGTTCTGCATGACAACGCCATCAAGACAAACCTGAAGAAGAAAAAGATAGATCAGTCT
CCTCTACATGCTTCCTGACGATGCGTAGAAGCATCACTTGAACAAAGACGAGGCGCGGATACCTTATTCCATGTCGAAAA
ACGCCTGTCGTTTCGCCACCGTAGATCGAAGACAAAGCTAAATTTATCCCTTACCCTGCCATAACTCAAAATGTGTCTCG
GCCCCTCCCGTCACTAGAGTGATAGACAGAGGGACAGGGCCTCGTTCCTCGCCGGGAAGCCGGGGAAGATCGACCGGCGG
CGGCTAGGTCACAGCAGACAGGAGGGGGAGGAGC--AAAGAACGATTATGCTTCCTTTAATTGAGCATTGACTCCATAGG
AAAGTGATGACGCATATGCTTAGGTTACCATCTCCGTTCCCTCCATCGATCGTGCCTTACACTCACAACAA-TACTTAAA
CTGAATGCACTACACCAAACAATATTACTACTTTCCGTACCATTATTGACATCATGACATT-------------------
------------ACAAGGGTTCAAGTACTTTCGATGTAGGCTGATGGTTATGAAATCGTTGAGAACGTGCAATCGCAGGT
CAACTACTCCAAGATGTACATTGCACCCCCC------ACCATGGCCACCACCCCGGCCGGCTCGTTCTCGGGCTCCCTAC
CTATATAAACCACGAGTGTGTGCGCTTCTCTCCCAAGATCAACACCAAACCTCTAGATATAGCTGGTATCTTTACCTCGC
GCCGCCCGAAGACATGGTATCCGCGACGACGATGCACCACCGGCGCCGCTCCATTCTCCAGCTGGCCCTCCTACTACTGG
CGGCGTCACCGGCGGCAATGCTGGCGGCCGGCGGAGCCTGCGAGAGAGAGGAGTTCCCGGCCGGCAGGAGCTACGCGACG
TGCGCGGATCTCCCTGCCCTCGGCGCCTCGCTGCACTGGACGTACGACGCGGCGGCCTCGTCGTTGTCCCTGGCATTCGC
GGCCAAGCCGCCCGGCGCGAGCGGCGCCGGCTGGGTGGCTTGGGGGGTCAACCCCACCGGCGATGGCATGAAGGGCGCGC
AGACGCTCCTCGCCTTCAAGAGCAAAGGCGCATACGTCGTCAACACGTACAACCTCACCGGGTACCGCCCGCTCAGCGCG
GCGTCCACGCCGATCGCGTTCGAGGCCACCGAGCTCGCCGCCGACGAGGGCGCCGACGGGAAGGTGCGGCTCTACGGCAC
GCTGCAGCTGCCCAAGGGCATGGAGGCCGTGAACCACATCTGGCAGGTAGGGTCGACGGTGGCCAATGGGGTGCCGGCCA
AGCACGCGTTCGCGCAGGAGAACCTCGAGGCGAAGGGCAGTCTTGTGCTCACCGGTGCCGGAGCGACGGAGGCCGCGCCA
GCTCCGGTGT----------------------------------------------------------------------
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----------------------------------------------------------------------TTATCTCTCA
CGACTATCTCGATTAACCAGTAGCAGTAGTGTTTGGGATACAAAATTCAAGAGAGAAAGAGAGAGTGGGGAAGGAGAAGG
AAGTAGGTAAGGAAGAACAGAGCTGGCAACAATCTGCAAAAAAAAACACACACACACACACACACACCAATCTTGGGGAT
GATCCGTCGGGAAAGAAAATTAAGAGTATT--------------------------------------------------
-----AAGAAAACTAAGAATACTATGAGCACTTCTAATTCAGATGATTTCACAATAGTTCCCCCACAAAAAA--------
--------------------------------------------C--------ATCAACATGAGTGACAACAATGTGAGT
GATCATGAGCATAATTTTAATTTGTCTACTATAAAGTATGCAAATTCGGTGAGAACCAATTTTTGATAATATGTGTTCTG
GGCGTCAA----------TCTCCGTTCAATTGCAATCAACCGCCCATATTATGCTTCAAGGGTTGGATGTACAACAGTAG
TGTTTTTTCTAGAGAAAATTTGGAGCGTTCTCCTTGTTTGGGTGATGTACCATGTAAAAAATTACTTTCACTGATATATC
TGCG-TACAATAAAAATCTTTATAGAGGAAAAAACATAACAAATGTA-TTTTTTATGATCAAATAATATGTTGATACAAC
ATGTACATGTGATTATGTGATACAATGTGAACAAACAGGATACCACACTTGCTACCTGGGCTCCTCCACCCCCGGGCTGT
GTTAAGCTTAACGTCGACGACTCTTTTGTTGAGGCCGACGGTAATGGTGGCGTCGGGATGATCCTCCGTGTCCACAGCGG
CGGCATCATCTTCTCCTCTTGCAGATTCATGTTCACATGCTCAAGTGCACTTGAAGCTGAAGCTGCTGCCTGCTGCGAAG
GCATTGCCCTCGCACTAGAGTGGAGTCAGGCCCCTGTCATCATCGAGACGGACTGCTCCATGCTTGCGAGCATGCTAAAG
GAAGATGTTATCAACCGATAGGTGATAGCAGCACATATAAATGAAATCAAGCGTCTGCTGAGCTCTGGCCGTGAGCACAA
AATAGAGGTTATCAAATGTGAGG
>chr5A_1
TAGGGATGTGATGACGCATATGCTTAGGTTAGCATCTCCGTTCCCTCCATCGATCGTGCCTTATACTCACAACAAATACT
TAAACTGAATGTACTCACCAAATAGGATTACTACTTTCCGTACCATTATTGACATCGTGACATTACAAGGGTTCATATAG
TTTCGAGGCCACCTGATGGCTATGAAATCGTTGAGAAGGTGAGATCGCAGGTCAACTACTCCAAGATACATTGCACCCCC
CACCATGGTCCATGGCCACCACCCCGGCCGGCTCCCTACCTATATAAACCACGAGTGTGCGCTTCTCTCCCAAGATCAAC
ACAAAACCTCTAGCTAGCTGGTGTCTTACCTCGCGCCTCCCGAAGACATGGCATCCGCGACGACGGTGCACCACCGGAGC
CGTTGCATTCTCCAGCTGGCCCTCCTGCTACTGGCGGCGTCATCGACGGCAATGCTGGCGGTCGACGGAGCCTGCGAGAG
CGAGGAGTTCCCGGCCGGCAGGAGCTACGCGACGTGCGCGGACCTCCCGACCCTCGGCACCTCGCCGAAAATATATAATA
GAACACCTGCGTCAGGCCCTCACTATCTAGCCATCCATTTTGCGATTCGCGATTCGTGCAAACACATTTCTCTTTTTTGT
TTCTCTCGCATAAAACATGTTTTGAAGTTCAAACCTTTGCAGCGCGGCAAAGCTTTTATCTAGAATCTAGGATAAATCTT
TCAGATATTTTGGTCAAAAATAAATATACAAAAAATGATTTTTAAGATTAAGATTTTTAATCTTAAAAATCATTTTTTGT
ATATTTATTTTTGACCAAAAAATCTGAAAGATTTATCCTAGATTCTAGATAAAAGCTTTGCCACGCTGCAAAGGTTTGAA
CTTCAAAACATGTTTTATGCGAGAGAAACAAAAAAGAAAAAAATTCAAATAAAAAGTTAGTTGTGTTGTACAGATCTTAA
AGCAATATTGGACAGCTAGAATAGCAGGGACCGGGTGCAGATGTTCTAAAAATCCACGTCCGGCGCCTCGCTGCACTGGA
CGTACGACGCGGCGGTCTCGTCGCTCTCCCTGGCGTTCGCGGCCAAACCGCCCGGCGCGAGCGGTGCCGGCTGGGTGGCC
TGGGGGATCAACCCCACCGGCGACGGCATGAAGGGCGCGCAGACGCTTGTCGCCTTCAAGAGCAGCGGCGCGTACGTCGT
CAACACGTACAACCTCACCGGGTACCGCCCGCTCAGCGCGGCGTCCACGCCGATCGCGCTCGAGGCCACCGAGCTCGCCG
CCGACGGGAAGGTGCGGCTCTACGGGACGCTGCAGCTGCCCAAGGGCATGGAGGCCGTCAACCACATCTGGCAGGTAGGG
TCGACGGTGGCCAATGAGATGCCGGCCAAGCACGCGTTCGCGCAGGAGAACCTGGAGGCGAAGGGCAGCCTCGTGCTCAC
TGGTGCCGGAGCGACGGACGCCGCGCCGGCTCCGGTGGCCGCTGGCCCGTCGGCCGAGGAGGCCACTGGTAACCTAGAGA
CAGAGACCGCGCCCGAGGCAGCGCCGGCCCCGTTGGCCGGTGCCCCGTCGACCGAGGAGGCTGCTGGTGACCTGGAGACG
GGGACCGCACCGTCGCCAGCGCCGTCCAGCGGGTCGGCACTCGGCAGCGGTAGTCACCACGTACGCCTTGGCTCCGGTGT
TCATTTTGATTCTGGTGTTCGCGGGTTTCTTCGCGACTGTATAATCTCGGTGAGGATTAAATTTGTCAACGAGAGAACGT
ATGTAGGATAGTCCTTTTTTTTCCTTGAGCACTGTGCAACCCTTTTTCTAATATATTTCTCTGGGTTGAAATGAAAGTTT
GTTGTATTTTCACGAGGGTGTTTTTGTTTCATGGTCATTTTGATTTTCGTGTGTTTGTCAAAGTGATTATTGGATGAGTT
CGAAGCTTCTTTTTCTGCATAAGTGTATTTAGATCACTATTTTAATGATCTAAAAATTGAGACACTTATTTTAGGACAGA
GGGAGTACAAACGTAATATGATTACATCTACGCATATTCGTTTCCAAACCAGTAAAGAAATAACAATAATCAGGCTACTT
TGCAATGGTGGATTTTTGAACCCAAATTGTCTTATAATGAATTGATCTATGAAAAAATTGCACTTTGCATGAAACATGTA
AAATGATAATTCATTTGTCTTTTTCGTAGGGGGAGGCCGGAGGATTGGGTCTCATCTCTCATGTTCTCATCACGTGGCAA
ATAATGAGCTCGTGTTTGTTGGATCATGGTGATCAAACAACGTAATTTTGATTTGTAATGGATGTGAATAACAGCTTGTA
TTTTCTCAGCGAGGTCACCCAAACAAACAAACGTTCCTTGCAGCAGGCTTGTTTGAGTGAACCATGCCACGAGAGAGTGT
TTATTCAAAAATTAACTTCCAGCAAAAGCTCGGGAATTGCCATGCTATAATACATATATTTGCCATGCGATTACAGAAAG
ATTTGTCATGTGAAAAGAAAAAATTGCCACACTAGTAGAAAGAATTGACAAGAATTTGGCATGCTGCAACAGAGCGAATT
GCCACACGTTGCAGAGATTTTCCATGATGTAGTGTAGATAATTGCCAGCTAAAGAAAAAAAGGAACAATTGTCACACATG
TCCAAGAATTGCCATGCTACAGCAGGTAGAATTGCGATGCTACATCAGAGAATTGACTTGCTATATAAAAAATGCCTACA
TGTTCATGAATTGCCATGCTACATCACAGCAAACTGTTGGAAATTGCCACACTCTAAATACATCCGGATGNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNCATGGGGAGTGAACATTTAGTATTTTCCGTTCACTCTTTCATTCATAGGGGTGAATGGAGC
GGACAGTAATCGCCACGTGTATCTCTTTGAGGCTCACACATGAAAATTGAATGTACAACAGAGTGTTTCTAGAAAAACCA
CTCATAAAAAACCCAAGTTCAACAACATTTAGGTTTTAAATTGGTTCCGGTTATATAGAACATGGTGCACTTTCGTAAGC
AACATCACCTCATTATTCTCGCAAAATATACATCATCCTTGTTAGATATGAGGTGATTTTTTGGGGGGCAAAAATATCAG
AAGTCGTATATTTAGTACCGCCGGCCCTATAAAAACACTATATAAAATGCAAATTACATCTAAATTATTGGGGGTGTTGA
AGTCCTCTTCCTCCTTCCACCGGTGGCGCCGTGAGCAAAGCTCGTTGCCGTTTCTAGACTTCCTTCCTAGTAGAGCAAAG
TTGCTAAAACCTAACAGCCGCTATAGAACATCAGTCGAGAAGTCATCGATGTAGACCAAAAAACGTCAGACGGCATTGGT
TGTGCATGCACCAGACGAGATTATTACTTTATGTAATCCGGATTGTAAAGCCCTTGTTAATTAAAAGTCCAATTCACAAA
G---AAAAAGGTATATAACATGGACACCCGTGATCTTTGTAGCAAATCACCGCCTCGGAGTAGAAACGTCGGCCAGACAT
AGTCACAACACAAATCTCATACGCTCCTGACTAGGACGAGGTTGGCTAACCTTCGCTGGTCGAAACTGGAGCCGAAGAAC
AGAGACGTACACCCACATTGTATGTTCCGCATGACAACGCCATCAAGACAAACCTACAGAAGAAAAAGATAGATCAATCT
CCTTTACACGCTTCCTAACGATATGAAGAAGCATCACTTGAACAACGACGAGGCGCGGATACCTTATTCCATGTCGAAAA
ACATCTATCGTCTCGCCATCG----------------------TTATCCCTTACCCTGCCGCC-------ATGGGTCTCG
GCCCCTCCTGTTGCTAGAGTGATAGACGGAGGGACAGGGTCTCGTTCCTCGCCGGAAAGCCGGGGAAGATCGACCGGCGG
CAGCTAGGTCACAGTAGCCAGGAGGCGCGAGGAGGAAAAAAAAACG------------AATTAATCATTGACCCCATAGG
GATGTGATGACGCATATGCTTAGGTTACCATCTCCGTTCCCTCCATCGATCGTGCCTTACACTCACAACAA-TACTTAAA
CTGAATGTACTACACCAAACAATATTACTATTTTCCGT-CCATTATGGACATCATGACATT-------------------
------------ACAAGGGTTCATGTACTTTCGATGTAGGCCGATGCTTATGAAATCGTTGAGAATGTGCAATCGCAGGT
CAACTACTCCAAGAT--ACATTGCACCCACC------ACCATGGCC------------GGCCCGTTCTCGAGCTCCCTAC
CTATATAAACCACGAGTGTGTGC--TTCTCTCCAAACATCAACTGAAAACCTCTAGA--TAGCTGGCG--------TCGC
GCCGCCCGAAGACATGGCAGCCGCGACGACGATGCACCACCGGCGCCGCCCCATTCTCCAGCTGGTCCTCCTGTTCCTGG
TGGCGTCACCGGCGGCAATGCTGGCGGCCGGCGGAGCCTGCGAGAGCGAGGAGTTCCCGGCCGGCAGGAGCTACGCGACG
TGCGCGGACCTCCCGGCCCTCGGCGCCTCGCTGCACTGGACGTACGACGCGGCGGCCTCGTCGTTGTCCCTGGCGTTCGC
GGCCAAGCCGCCCG-CGCGAGCGGCGCCGGCTGGGTGGCCTGGGGGATCAACCCCACCGGCGACGGCATGAAGGGTGCGC
AGACGCTCCTCGCCTTCAAGAGCAGCGGCGCGTACGTCATCAACACGTACAATCTCACCGGGTACCGCCCGCTCAGCGCG
GCGTCCACGCCGATCACGTTCGAGGCCACCGAGCTCGCCGCCGACGAGGGCGCCGATGGGAAGGTGCGGCTCTACAGCAC
GCTGCAGCTGCCCAAGGGCATGGAGGCCGTGAACCACATCTGGCAGGTAGGGTCGACGGTGGCCAATGGGGTGCCGGCCA
AGCACGCGTTCGCGCAGGAGAACCTGGAGGCGAAGGGCAGTCTCGTGCTCACCGGTGCCGGAGCGACGGAGGCCGCGCCA
GCTCCGGTGT----------------------------------------------------------------------
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----------------------------------------------------------------------TTATCTCTCA
CGACTATCTCGATTAACCAGTAGCAGTAGTGTTTGGGATACAAAATTCAAGAGAGAAAGAGAGAGTGGGGAAGGAGAAGG
AAGTAGGTAAGGAAGAACAGAGCCGGCAACAATCTGCGAAAAAAA------------------ACACCAATCTTGGGGAT
GATCCGTCGGGAAAGAAAATTAAGAGTATT--------------------------------------------------
-----AAGAAAACTAAGAATACTATGAGCACTTCTAATTCAGATAATTTCACAATAGTTCCCCCGCAAAAAAAGGAGAGT
TCAAAATAGTGGACATCAACATGAATGTACCCACAGACCCACACACAAAAAATATCAACATGAGTGACAACAATGTGAGT
GATCATGAGCATAATTTTAATTTGTCTACTATAGAGTATGCAAATTCGGTGAGAACCATTTTTTTATAATATGTGTTTTG
GGCGTCCCATGCCATCATTCTCCGTTCAATTGCAATCAGACTCCCATATTATGCTTC-----------------------
-------------------------------CCTTGTTTGGGTGATGCACCATATAAAAAATTACTTTCACTGATATATC
TTGCATACCATAAAAGTCTTTATAAAGGCAAAAACATAACAAATGTA-TT-TTTATGATCAAATAATATGTTGATACAAC
ATGTACATGTGATTATGTGATATCATGTGAACAAACAGGATACCGCACCTGCTACCTGGGCTCCTCCACCCCCGGGCTGT
A--AAGCTTAACGTCGGCGACCCTTTTGTTGAAGCCGGCGGTAATGGTGGCGCCGGGATGATCCTCCGTGTCCACAATGG
CGGCATCATCTTCTCCTCTTGCAGATTCATGTTCACATGCTCAAGCGGACTTGAAGTTGAAGCTGTTGCCTGCTGCGAAG
GCACTGCTCTCGCACTAGAGTGGAGTCAGGCCCCTGCCATCATCGAGACGGACTGCACCATGCAGGCGAG----------
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>chr5B_3
--GAC---------------------------------------------------------------------------
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----------------GAGATTATTACTTTATGTAATCTAGATTTTAAACCCATGGTTAACTAAAAATCCAACTCACAAA
G---AAAA-GGTAGAAAATATGGGAGGATGTGATCTTTGTAGCAAATCACTGCCGCGGAGTAGAAACATCGGCACATTGT
CACGG-AACACAAATCTCATACGCTCCTGACTAGGCCAAGGTTGGCCAACGTTTGACGGTCAGAACTGGAGCAGAAGAAC
CAAGATGTCCACCCACATTGTATGTTCTGCATGACAACGCCCTCAAGAAAAACCTGAAGAAGAAAAAGATAGATCAGTCT
CCTCTACATGCTTCCTGACGATACGTAGAAGCATCACTTGAACAAAGACGAGGCGCGGATACCTTATTCCATGTCGAAAA
ACGCTTGTCGTCTCGCCACCGTAGATCGAAGACAATGCTAAATTTATCCCTTACCCTGCCGCC-------ATGGGTCTTG
GCCCCTCCCGTCGCTAGAGTGATAGACGGAGGGACAGGGTCTCGTTCCTCGCCGAGAAGCCGGGGAAGATCGACCAGCGG
CGGCTAGGTCACAGCAGCCAGGAGGGT-AGGAGC--AAAGAACGATTATGCTTCCTTTAATTAAGCATTGACTCCATAGG
GATGTGATGACGCATATGCTTAGGTTACCATCTCCGTTCCCTCCATCGATCGTGCCTTACACTCACAACAA-TACTTAAA
CTGAATGCACTACACCAAACAATATTACTACTTTCCGTACCATTATTGACATCATGACATT-------------------
------------ACAAGGGTTCATGTACTTTCGATGTAGGCTGATGGTTATGAAATCGTTGAGAACGTGCAATCGCAGGT
CAACTACTCCAAGATGTACATTGCACCCCCC------ACCATGGCCACCACCCCGGCCGGCCCGTTCTCGAGCTCCCTAC
CTATATAAACCACGAGTGTGTGC--TTCTCTCCAAACATCAACTCAAAACCTCTAGA--TAGCTGGCG--------TCGC
GCCGCACGAAGACATGGCAGCCGCGACGACTTTGCACCACCGGCGCCGCTCCATTCTCCAGCTGGCACTCCTGCTACTGG
CGGCGTCACCGGCGGCAATGCTGGCGACCGGCGGAGCCTGCGAGAGCGAGGAGTTCCCGGCCGGCAGGAGCTACGCGACG
TGCGCGGACCTCCCGACCCTCGGCGCCTCGCTGCACTGGACGTACGACGCGGCGGCCTCGTCGTTGTCCCTGGCGTTCGC
GGCCAAGCCGCCCGGCGCGATCGGCGCCGGCTGGGTGGCCTGGGGGGTCAACCCCACCGGCGATGGCATGAAGGGCGCGC
AGACGCTCCTCGCCTTCAAGAGCAGTGGCGCATACGTCGTCAACACGTACAACCTCACCGGGTACCGCCCGCTCAGCGCG
GCGTCCACGCCGATCACGTTCGAGGCTACCGAGCTCGCCGCCGACGAGGGCGCCCATGGGAAGGTGCGGCTCTACGGCAC
GCTGCAGCTGCCCAAGGGCATGGAAGCCGTGAACCACATCTGGCAGGTAGGGTCGACGGTGGCCAATGGGGTGCCGGCCA
AGCACGCGTTCGCCCAGGAGAACCTGGAGGCGAAGGGCAGTCTCGTGCTCACCGGTGCCGGAGCGACGGAGGCCGCACCA
GCTCCGGTGT----------------------------------------------------------------------
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----------------------------------------------------------------------TTATCTCTCA
CGACTATCTCGATTAACCAGTAGCAGTAGTGTTTGGGATACAGAATTCGAGAGAGAAAGAGAGAGTGGGGAAGGAGAAGG
AAGTAGGCAAGGAAGAACAGAGCCTGCCACAATCTGCAAAAAAAA------------------A----AATCTTGGGGAT
GATCCGTCGGGAAAGAAAATTAAGAGTATTATGAGCACCTTTAATCCGGATGAGTTGATATAATCATGGGGGTGATCCAT
TGGTAAAGAAAACTAAGAATACTATGAGCACTTCTAATTCAGATGATTTCACAATAGTTCCCCCGCAAAAAAA--AGAGT
TCAAAATAGTGGACAGCCACATGAATGCGCCCACACAAAAAAAAC--------ATCAACATGAGTGACAACAATGTGAGT
GATCATGAGCATACTATTAATTTGTCTACTATAAATTATGCAAAATCGGTAAGAACCATTTTTTGATAATATGTGTATTG
GGCGTCCCATGCCG-------CCGTTCAATTGCAATCAACCGCCAATATTATGCTTCAAGGGTTGGATGTACCAGAGTAG
TGC-TTTTCTAGAGAAAATTTGGAGCGTCCTTCTTGTTTTGGTGATGTACCATGTAAAAAATTACTTTCACTGATATATC
TTGCATACCATAAAAGTCTTCATAGAGGCAAAAACATAACAAAAGTATTT-TTTATGATCAAATAATATGTTGATACAAC
ATGTACCTATGATTATGTGACACCATGTGAACAAACAGGATATCGCACCTGCTACCCGGGCTCCTCCACCCCCGGGCTGT
GTTAAGCTTAACGTTGACGACTCTTTTTTTAGGCT-GACAGTAATAGTGGCACCGGGATGATCCTCTGTGTCCATAACGG
CGGCATCATCTTCTCCTCTTGCATATTCATGTTCACATCCGCAAGT----------------------------------
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>chr5D_275
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-----------------------------------------------ACAAACCTGCAGAAGAAAAAAGTAGATCCGTCT
CCTCTACATGCTTCCCAACGATACGGAGAAGCATCACCTGAACAAAGACGAGGCGCGGATACCTTATTTCATGCCGAAAA
ACGTATA--------------------------------------------TACCCTGCTGCC-------ATGGGTATCG
GCCCCTCCCGACACTAGAGTGATAGACAGAGGGACAGGGTCTCGTTCCTCGCAGGGAAGCCGGGGAAGATCGACCGGCGG
TGGCTAGGTCACAGCAGCCAGGAGGCGCGAGGAGGAAAAGAACGATTATGCTTCATTTAATTAATCATTGACCCCATAGG
GATGTGATGACGCATATGCTTAGGTTACCATCTCCGTTCCCTCCATCGATCGTGCCTTACACTCACAACAAATACTTATA
ATGAATGTACT-CACCAAACAAGATTACTACTTCCCGTACCATTATTGACATCGTGACATTAGAAGGGTTCATGTTTTGT
CGGAAAAAAAAAACAAGGGTTCATGTACTTTCGAGGGCACCTGATGGTTATGAAATCGTTGAGAACGTGAGATCGCAGGT
CAACTACTCCCAGAT--ACATTGCACCCCCACCAGCTACCATGGCCACCACCCCGGCCGGCCCGTTCTCGAGCTCCCTAC
CTATATAAACCACGAGTGTGTGC--TTCTCTCCAAACATCAACTCAAAACCTCTAGA--CAGCTGGTGCCTTTACCTCGC
GCCGCCCGAAGACATGGCATCCGCGACGACAATGCACCACCGGCGCCGCTCCATTATCCAGCTGGCCTTCCTGCTCCTGG
TGGCGTCACCGGCGTCAATGCTGGCGGCCGGCGGAGCCTGCGAGAGCGAGGAGTTCCCGGCCGGCAGGAGCTACGCGACG
TGCGCGGACCTCCCGACCCTCGGCGCCTCGCTGCACTGGACGTACGACGCGCCGGCCTCGTCGCTGTCCCTGGCGTTCGC
GGCCAAGCCGCCGGGCACGAGCGGCGCCGGCTGGGTGGCCTGGGGGATCAACCCCACCGGCGACGGCATGAAGGGCGCGC
AGACGCTCGTTGCCTTCAAGAGCAGCGGCGCGTACGTCGTCAACACGTACAACCTCACCGGGTACCGCCCGCTCAGCGCG
GCGTCCATGCCGATCGCGTTCGAGGCCACCGACCTCGCCGCCGACGAGGGCGCCGACGGGAAGGTGCGGCTCTACGGTAC
GCTGCAGCTGCCCAAGGGCATGGAGGCCGTGAACCACATCTGGCAGGTAGGGTCGACGGTGGCCAATGGGGTGCCGGCCA
AGCACGCGTTCGCGCAGGAGAACCTGGATTCGAAGGGCAGTCTCGTGCTCACTGGTGCCGGAGCGACGGACGCCGCGCCG
GCTCCGGTGGCCGGTGGCCCGTCGGCCGAGGAGGCTACTGGTAACCTAGAGACAGAGACCGCGCCCGAGGCAGCGCCGGC
CCCGTTGGCCGGTGCCCCGTCGACCGAGGAGGCTGGCGGTGACCTAGAGACGGGAACCGCACCGTCGCCAGCGCCAGCGC
CGTCCAGCGGGTCGGCAGCGATAATCACCACGTACGCCTCGGCTCCGGTGTTCATTTTGATTCTGGTGTTCGCTGGTTTC
TTCGCGACTGTATAATCTCGGTGACATTAAATTTGTCAACTGGAGAACGTGTCTAGGGTAGTCTTTTTTTTTTCCTTGAG
CACTGTGCAACCCTTTTTTTTCTCCGGGTTGAAATGAAAGTTTGTTGTATTTTCAAGAGGGTGTTTTTGTTTCATGGTCA
TTTTGAGTTTGGTGTGTTTGTCAACGTGATTTATTGGATGAGTTCGAAGCTTTTTTTTTTGCATTCAATTCTACACGAAC
TGAATATTACCATTAGTTTCTCTCTTTTCTGCCAAATAAATATTTACCGTTCTGTTAGGAAGCCACATGCTTATCTCTCA
CGACTATCTCGATTAACCAGTAGCAGTAGTGTTTGGCATATAGAATTTGAGAGAGAAAGAGAGGGTGGGGAAGGAGAAGG
AAGTAGGTAATGAAGAACAGAGC---------------------------------------------------------
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>chr5B_604
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----------------------------------------------------------AATTAATCATTGACCCCATAGG
GATGTGATGACGCATATGCTTAGGTTACCATCTCCATTCCCTCCATCGATCGTGCCTTACACTCACAACAAATACTTAAA
CTGAATGTACT-CACCAAACAAGATTACTACTTCCCGTACCATTATTGACATCGTGACA-T-------------------
------------ACAAGGGTTCATGTACTTTCGAGGCCACCTGATGGTTATGAAATCGTCGAGAACGTGAGATCGCAGGT
CAACTACTCCCAGAT--ACATTGCACCCCCACCA-------TGGCCACCACCCCGGCCGGCTCGTTCTCGAGCTCCCTAC
CTATATAAACCACGAGTGTGCGC--TTCTCTCCCAGGATCAACACAAAACCTCTAGC--TAGCTAGTGTCTTTACCTCGC
GCCGCCCGAAGACATGGCATCCGCAACGACGATGCACCATCGGCGCCGCTCCATTATCCAGCTGGCCCTCCTGCTCCTGG
TGACGTCACCGGCGGCAATGCTGGCGGCCGGCGGAGCCTGCGAGAGCGAGGAGTTCCCGGCCGGCAGGAGCTACGCGACG
TGCGCGGACCTCCCGACCCTCGGCGCCTCGCTGCACTGGAAGTACGACGCGGCGGCCTCGTCGCTGTCCCTGGCGTTCGC
GGCCAAGCCGCCGGGCACGAGCGGCGCCGGCTGGGTGGCCTGGGGGATCAATCCCACCGGCGACGGCATGAAGGGCGCGC
AGACGCTCGTCGCCTTCAAGAGCAGCGGCGCGTACGTCGTCAACACGTACAACCTCACCGGGTACCGCCCGCTCAGCGCG
GCGTCCACGCCGATCGCGTTCGAGGCCACCGAGCTCGCCGCCGACGAGGGCGCCGACGGGAAGGTGCGGCTCTACGGCAC
GCTGCAGCTGCCCAAGGGCATGGAGGCCGTGAACCACATCTGGCAGGTAGGGTCGACGGTGGCCAATGGGGTGCCGGCCA
AGCACGCGTTCGCGCAGGAGAACCTGGAGGCGAAGGGCAGCCTCGTGCTCACTGGTGCCGGAACAACGGACGCCGCACCG
GCTCCGGTG-----------------------------------------------------------------------
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-----------------------
>chr5D_1001
--------------------------------------------------------------------------------
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-------------ATGGCCTCCGCGACGCAGCAGCACCGGCGCCGCCGCGCCATCCTCCAGCTGGCCGCCCTGCTGGTCC
TTGTCTCGCAGGCAGC------GGCCGCGGGCGGCGCCTGCAAGAGCGAGAAGTTCCCGGCTGGCAAGAGCTACGAGACG
TGCGCGGACCTCCCGGCCCTCGGCGCCGCGCTGCACTGGACCTACGACGCGGCGGCCTCGTCGCTCTCCGTGGCGTTCGC
GGCCAAGCCG------GCGAGCGGTGCCGGCTGGGTGTCGTGGGGGATCAACCCCACCGGCGACGGCATGAAGGGCGCGC
AGGCGCTCCTCGCCTTCAAGAGCGGCGCCACGTACGTCGTCAACACGTACAACCTCACCGGGTACAAGCCGCTCAGCCCG
GCGTCCACGCCGATAGCGTTCAAGGCCACCGGGCTCGCCGCCGACGAGGGCGCCGGCGGGAAGGTGCGGCTCTACGGCAC
GCTGCAGCTGCCCAAGGGCATGGAGTCCGTGAACCACATCTGGCAGGTGGGGTCCGCGGTGGCCAACGGGGTGCCGGCCA
AGCACGCGTTCGGGCAGGAGAACCTGGATGCCAAGGGCAAGCTCGTGCTCGCCGGTGCCGGCGCGCCGGAGGCCGCCCCG
GCTCC---------------------------------------------------------------------------
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>chr5B_1001
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-------------ATGGCCTCCGCGACGCAGCAGCACCGGCGCCGCCGCGCCATTCTCCAGCTGGCCGCCCTGCTGGTCC
TTGTCTCGCCGGCAGC------GGCCGCGGGCGGCTCCTGCAAGAGCGAGAAGTTCCCGGCTGGCAAGAGCTACGAGACG
TGCGCGGACCTCCCGGCCCTCGGCGCGGCGCTGCACTGGACATACGACGCGGCGGCCTCGTCGCTCTCCGTGGCGTTCGC
GGCCAAGCCG------GCGAGCGGCGCCGGCTGGGTGGCGTGGGGGATCAACCCCACCGGCGACGGCATGAAGGGCGCGC
AGTCGCTCCTCGCCTTCAAGAGCGGCGCCACGTACGTCGTCAACACGTACAACCTCACCGGGTACAAGCCGCTCAGCCCG
GCGTCCACGCCGATCGCGCTCAAGGCCACCGGGCTCGCCGCCGACGAGGGCGCCGGCGGGAAGGTGCGGCTCTACGGCAC
GCTGCAGCTGCCCAAGGGCATGGAGTCCGTGAACCACATCTGGCAGGTGGGGTCCGCGGTGGCCAACGGGGTGCCGGCCA
AGCACGCGTTCGCGCAGGAGAACCTGGATGCCAAGGGCAAGCTCGTGCTCGCCGGTGCCGGCGCGCCGGAGTCCGCCCCG
GCTCC---------------------------------------------------------------------------
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>chr5A_1001
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-------------ATGGCCTCCGCGACGCAGCAACACCGGCGCCGCCGCGCCATTCTCCAGCTGGCGGCCCTGCTGGTCC
TTGTCTCGCCGGCGGC------GGCCGCGGGCGGCGCCTGCAAGAGCGAGAAGTTCCCGGCCGGCAAGAGCTACGAGACG
TGCGCGGACCTCCCGGCCCTCGGCGCCGCGCTGCACTGGACCTACGACGCGGCGGCCTCGTCGCTCTCCGTGGCGTTCGC
GGCCAAGCCG------GCCAGCGGCGCCGGCTGGGTGTCGTGGGGGATCAACCCCACCGGCGACGGCATGAAGGGCGCGC
AGGCGCTCCTCGCCTTCAAGAGCGGCGCCACGTACGTCGTCAACACGTACAACCTCACCGGGTACAAGCCCCTCAGCGCG
ACGTCCACGCCCATCGCGTTCAAGGCCACCGGGCTCGCCGCCGACGAGGGCGCCGGCGGGAAGGTGCGGCTCTACGGCAC
GCTGCAGCTGCCCAAGGGCATGGAGTCCGTGAACCACATCTGGCAAGTGGGGTCCGCGGTGGCCGGCGGGGTGCCGGCCA
AGCACGCATTCGCGCAGGAGAACCTGGATGCCAAGGGCAAGCTCGTGCTCGCCGGTGCCGGCGCGCCGGAGGCCGCCCCG
GCTCC---------------------------------------------------------------------------
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-----------------------
>SNPs
S-------------------------------------------------------------------------------
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------------------------S--------------------------S------------------------S-S-
SSSS------------------------------S-------------------S---------------------SS--
---S----------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------S---------------------------------------------------------
-----------S-----------------------S------------------------SSSSSSSSSS---S------
---------------------------------------S----------------------------------------
-----------------S---------S----------------------------------S-----------------
S-S-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------S--------------------------------------------------------
----------------------------------------------------------------------S---------
-----------------------SS--------------------S-----------SS--------S------------
-----------------S------------------------------------------------------S-------
----------------------------------------------S---------------------------------
--------S-----S-----------------------------------------------------------S-----
---------------------------------------S----------------------------------------
------------------------SS------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------S-----------------S------------------------------------
--------------------------------------------------------------------------------
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-----------------------S---------------------SSSSSSSSSSSSSSSSSS-----------------
--------------------------------------------------------------------------------
----------------------------------------------------------------S---------------
--------------------------------------------------------------------------------
----------------------------------------------------------S------------------S--
------SS----------------------------------------------------------------S-S-----
--SS------------------------S---------------------------------------------------
-SSS----S------S------------S---------------------S-----------------------------
-----------------------S--------------------S---S-------------------------------
----------------------------------------------------S-----------------------S---
-----------------------------------------------S--------S--------S--------------
---S---S----------------------------S-------------------S------SS-----SSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSS
>forward_3735
--------------------------------------------------------------------------------
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-----------------------------------TTTGTAGCAAATCACCGCCC-------------------------
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-----------------------
>reverse_5969
--------------------------------------------------------------------------------
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------------------------------------------------CACACACACACACACACACC------------
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--------------------------------------------------------------------------------
-----------------------
