>input_sequence_72443
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--------------------------------------------------------------ATGGAGACCTCCTTCCTC
CCTACCGCGCGGCCCCTCCCCGCGTTCCAAACCCTAGCCGCGGCCCCGCGCTGCCCCCGCCCTCTGCGCCGCTCCACCAT
CCGCGCCGCCATCTCCCGCGGGCGCAAGGAGGACACGGTCGCCGTGGTCCGCGAGCAGCTGGAGGGGTGCTACCTCCTGG
CCGGCATCCGC---------------------------------------------------------------------
------------------------------------------TACGAGGGCCTGACGGTGAAGCAGTTCCAGGGCATCCG
CGACGCGCTGCCGGAGTCGTGCCACCTCCTGGTGGCGAAGAACACGCTGGTGGGGAAGGCCATCGAGGGCACCCCCTGGG
AGGCGCTCAAGCCGTGCATGAAGGGCATGAACGCCTGGCTCTTCGTCCACACGGAGGAGGTCCCCGTCGCGCTCAAGCCC
TACCGCGCCTTCCAGAAGGAGGAGCGCGTCGAGGAGACCAACGACTTCATCGGGGCGGTGTTCGAGGGCAAGTACTACGC
GCCCGCCGAGTTCAAGTCGCTCGAGACCATGCCCAGCCGCGCCGAGGTCTACTCCAAGCTGCTCGGCGCCCTCAATGGGC
CGGCCACCTCCCTCGTCACCACGCTGCAGGCGCCCGCCAGGGACGTCGTCGCCGTGCTCTCGGCCTACGTGCGCAAGCTC
GAGGAGGAGTCCGGCGCCGGCGCCGGCACCGCCTAG--------------------------------------------
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>chr4B_1_TraesCS4B01G198600
TACACCTTATATAAAGGAACGGAGGGAGTAATATTATATTATGCACTATAAAGGACATGCATGATCATGTTCCTTTCATA
TTTTTCCTTTCGCAAATGTATATGGGAGTATTTAACATTTTCAAATGTATATACAAGTTTTCATGACTTGTCAATTAGAC
GGGCTGAATGAGGCTAGCTAGTCAGAAGTGAAACATTGTTAACCTACAATCTTTTATATAGTACGAGTACATCCTTCCTC
CGGAATTAACTGCCCTGAAATGAGTTTATCACAACTGCCGCTGAAATGAAATGAGTGTATAATTTAATTCCGGGCGGAGG
GAGTTGAAATGAATGTATAATTTAATTCCGGACGGAGGGAGTACTAACTATACGAGTCTTGTGGTTTACCTTTAGTCTCT
GTAATGAAACATGTTGCTGTGGCGCCTCGTAGGTACATGTGCATCACTGTTTTCCTCCCTCCTGTCAAAATATGAATGAT
TCTACTTCTTTTCTGGTTCAAACTTTTTTCAGTTTGACTAAACTTTTTAGAAAAAATATATATTAACAATTTTTTTCAAA
AAGGAGGATGACTCCCGGCCTTTGCATGCTTAGTGTCAAATTAGTTTTCTTAAATCTATCATGAAATGTACGTTTGTAAT
GTATGTATTTGGTGTTGTAAATATTAGTAATTTTCTATAAACTTATTCAAAATTAATACTGTCTGACTTAGAGAAAACTG
TATTCAACCACATTTTCAATAGGAAGGAGTAATAATCTTTAAAG----AG---------TATGAATATGCAGAACACAAC
GGTCTATCTTCCTCGCTGAATATACGGTCACACATAATCCAAAGGAACCCCTCAAAA-----GAAAACATAATCCAAAGG
TCCACGTGCACCGTGTCCACGGAAGAAACCACCCATCATCGTCTTCTCCATAGATAAGCTTTTTCCACTC-ACTCTATCT
TCCTCGCCGTTTCTCCCCAACCCAACCCCCGTCCGGCGCGCCCGCCCGCCCTAGA---AAAAATGGAGACCTCCTTCCTC
CCTACCGCGCGGCCCCTCCCCGCGTTCCAAACCCTAGCCGCGGCCCCGCGCTGCCCCCGCCCTCTGCGCCGCTCCACCAT
CCGCGCCGCCATCTCCCGCGGGCGCAAGGAGGACACGGTCGCCGTGGTCCGCGAGCAGCTGGAGGGGTGCTACCTCCTGG
CCGGCATCCGC---------------------------------------------------------------------
------------------------------------------TACGAGGGCCTGACGGTGAAGCAGTTCCAGGGCATCCG
CGACGCGCTGCCGGAGTCGTGCCACCTCCTGGTGGCGAAGAACACGCTGGTGGGGAAGGCCATCGAGGGCACCCCCTGGG
AGGCGCTCAAGCCGTGCATGAAGGGCATGAACGCCTGGCTCTTCGTCCACACGGAGGAGGTCCCCGTCGCGCTCAAGCCC
TACCGCGCCTTCCAGAAGGAGGAGCGCGTCGAGGAGACCAACGACTTCATCGGGGCGGTGTTCGAGGGCAAGTACTACGC
GCCCGCCGAGTTCAAGTCGCTCGAGACCATGCCCAGCCGCGCCGAGGTCTACTCCAAGCTGCTCGGCGCCCTCAATGGGC
CGGCCACCTCCCTCGTCACCACGCTGCAGGCGCCCGCCAGGGACGTCGTCGCCGTGCTCTCGGCCTACGTGCGCAAGCTC
GAGGAGGAGTCCGGCGCCGGCGCCGGCACCGCCTAGTGGCAGTTGCGATATGGTTGTGCCTCCTATCCTCACATCTCACT
CCTTGTTTGTACAATTCCTTGTACCTTTA---CTGTCTCCCATTTGAATTGAATCACAAGTTTTCCCCTTCACAATGTGC
GGCCTGTAATTGGGCAGTTTCTCTTGCCTGCTGGTGTCCAAACTGGGATGAAATTGGAAAAGGATGGTTCGAGAATCGGG
CAATGTATATCATGTTGATGAATAATTTGGTTTGTGTAAGAGCAAGTTTAATAGGGTAAGGACCCATGACAAACAATGGG
AACTACTGATGGCTATTTTTATGTCAGTTTATATC-----------GTCAAATTTCATTTTTCAGGCGACGGTGAGGCTT
CGTCGCAAGGCTTTGTCGCATTCTTCACTTAACCGTGTGCTATGGTTCTGAAGTTAGACAAAATGTTTGTGTTTGTGCAT
CATAACCTGACCGTGGCTTCGCTGCCTCCACTTTCTGCTCAGAAACCACTCAGGATTCAGATTTTAGTAACACTAACTAG
GAGTTGGAAATTCTGTGAAATAGATCTCAAAGTTTCCTGTTGATCGCCAAAAAATCATACAGTACATTGTATAAGATCAC
CACATATGACGCTAGGATAACCGATTGCCACCACATTTCAGACAACTCAGT--GAACTACCACTTTCGCGCCTAATGAGT
AAAAAAATTGCACTCATGACGAATTGAGCTCGCAAAGACAACGTTTCTGACAGGTTGGCCCTGCCTGTCAGCCTGATGAG
GCGTCCGCGGACAGACGCCGCCAGAAGGCTCCGTCCGTTAGGCAGGCGTCAGGTACCCTACGGTATTAAGGGCATGCGCC
ATCCGTTTCAATCCCACCCATCCCCAAGACTCCTCGGCCCCACTTTGTTGCCGTTGT------TGCCATTGCCTAGTCGT
CGGGTAACCGCCTTCGCGGTAACCATGGTCTCCTAGGAGGATCTCTCGAGCGGCTCGTCGTCCAACGACGATTCCATAAG
CAACCAGGTTCGTCCTGA
>chr4A_712
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-----------------------------------------------------------------------AGAGAACTG
TATCGGACCACATTTTCAATAGGAAGGAGTAATAATCTTAATAAAAAAAG---------TAAGAATACGAAGAACACAAC
GGTGTATCTTCCTCGCTGAATATACGGTCACACATAATCCAAAGGAACCCCTCAAAGGAAATGAAAACATAATCCAAAGG
TCCACGTGCACCGTGTCCACGGAAGAAACCACC---CATCGTCTTCTCCATAGATAAGCTTCTTCCACTCCACTCTATCT
TCCTCGCCGTTTCTCCCCAACCCAACCCCCGCCCGGCGCGCCCGCCCGCCCGCCCCAGAAAAATGGAGACCTCCTTCCTC
CCGACCGCGCGGCCCCTCCCGGCGTTCCAAACCCTAGCCGCGGCCCCGCGGTGCCCCCGCCCTCTGCGCCGCTCCACCAT
CCGCGCCGCCATCTCCCGCGGGCGCAAGGAGGACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACGAGGGCCTGACGGTGAAGCAGTTCCAGGGCATCCG
CGACGCGCTGCCGGAGTCGTGCCACCTCCTGGTGGCGAAGAACACGCTGGTGGGGAAGGCCATCGAGGGCACCCCCTGGG
AGGCGCTCAAGCCGTGCATGAAGGGCATGAACGCCTGGCTCTTCGTCCACACGGAGGAGGTCCCCGTCGCGCTCAAGCCC
TACCGCGCCTTCCAGAAGGAGGAGCGCGTCGAGGAGACCAACGACTTCATCGGGGCGGTGTTCGAGGGCAAGTACTACGC
GCCCGCCGAGTTCAAGTCGCTCGAGACCATGCCCAGCCGCGCCGAGGTCTACTCCAAGCTGCTCGGCGCCCTCAATGGGC
CGGCCACCTCCCTCGTCACCACGCTGCAGGCGCCCGCCAGGGACGTCGTCGCCGTGCTCTCGGCCTACGTGCGCAAGCTC
GAGGAGGAATCCGGCGCCGGCGACGGCACCGCCTAGTGGCAGTTGCGATATGGTTGTGCCTCCTATCCTCACATCTCACT
CCTTGTTTGTACAATTCCTTGTACCTTTA---CTGTCTCCCATTTGAATTGAATCACAAGTTTTCCCCTTCACAATGTGC
GGCTTGTAATTGGGTAGTATCTCTTGCCTGCTGGTGTCCAAATTGGGATGAAATTGGAAAAGGATGGTTTGAGAATCGGG
CAATGTATATCATGTTGATGAATAATTTGGTTTGTGTAAGAGCAACTTCAATAGGGTAAGGACCCATGAGAAACAATG--
-------------TATTCTTAGGTCAGTTTATATCCAGAGCTTCAGGTCAAATTTCATTTTCCAGGCGACGCTGAGGCTT
CGTCGCATTCTTCA------------ACTTAACCGTGTCCTATGGTTCTGAAGTTAGACAAAATGTTTGTGTTTGTGCAT
CATAACTTGACTGTGGCTTCGCAGCCTGCACTTTCTGCTCAGAAACAACTCAGGATGCAGATTTTGTTAGCACTAACTAG
GAGTTGGAAATTCTTCGAAATAGATCTCAAAGTTTCCTGTTGATCGCCAAAAAACCA-----TACATTGTATAAGACCAC
CACATATGAGGCTATGATAACGGATTGCCACCACATTTCAGACAACTCACACCGAACTACCACCTTTGCGCCTAATGAGT
AACAAAGTGCACTT-ATGACGAATTGAGCTCGCAAAGACAACGTTTCTGACAGGCTGGCCCCGCCTGTCAGCCTGATGAG
GCGTCCGCGGACAGACGCCGTCAGAAGGCTCCGTCCGTTAGGCGGGCGTCAGGTACCCTACGGTATTAAGGGCGTGCGCC
GTCCGTTTCAATCCCACCCATCACCAAGACTCTTCTGCCCCACTTTGTTGCTGTTGCTGCTGCTGCCACTGCCTAGTCGC
CGGGTAAGCGCCTCCGCGGTAACCATGGTCTTCTAGGATGATCTTTCGAGTGGCTCGTCGTCCAACGACGACTCCATAAG
CAGCCAAGTTCGTCCTG-
>chr4D_738
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-----------------AATAGGAAGGAGTAATAATCTTTAAAG----AGTACGGAGTATATGAATACGCAGAACACAAC
GGTCTATCTTCCTCGCTGAATATACGGTCACACATAATCCAAAGGAACCCCTCAAAGGAAATGAAAACATAATCCAAAGG
TCCACGAGCACCATGTCCACGGAAGAAACCACC---CATCGTCTTCTCCATAGATAAGCTTTTTCCACTCCACTCTATCT
TCCTCGCCGTTTCTCCCCAACCCAACCCCCGCCCGGCGCGCCCGCCCGCCCGCCCCAGAAAAATGGAGACCTCCTTCCTC
CCGACCGCGCGGCCCCTCCCCGCGTTCCAAACCCTAGCAGCGGCCCCGCGCTGCCCCCGCCCTCTGCGCCGCTCCACCAT
CCGCGCTGCCATCTCCCGCGGGCGCAAGGAGGACACGGTCGCCGTGGTCCGCGAGCAGCTGGAGGGGTGCTACCTCCTGG
CCGGCATCCGG---------------------------------------------------------------------
------------------------------------------TACGAGGGCCTGACGGTGAAGCAGTTCCAGGGCATCCG
CGACGCGCTGCCGGAGTCGTGCCACCTCCTGGTGGCGAAGAACACGCTGGTGGGGAAGGCCATCGAGGGCACCCCCTGGG
AGGCGCTCAAGCCGTGCATGAAGGGCATGAACGCCTGGCTCTTCGTCCACACGGAGGAGGTCCCCGTCGCGCTCAAGCCC
TACCGCGCCTTCCAGAAGGAGGAGCGCGTCGAGGAGACCAACGACTTCATCGGGGCGGTGTTCGAGGGAAAGTACTACGA
GCCCGGCGAGTTCAAGTCGCTCGAGACCATGCCCAGCCGCGCCGAGGTCTACTCCAAGCTGCTCGGCGCCCTTAATGGGC
CGGCCACCTCCCTCGTCACCACGCTGCAGGCGCCAGCCAGGGACGTCGTCGCCGTGCTCTCCGCCTACGTGCGCAAGCTC
GAGGAGGAGTCCGGCGCCGGCGCCGGCGCCGCCTAGTGGCAGTTGCGATATGGTTGTGCCTCCTATCCCCACATCTCACT
CTTTGCTTGTACAATTCCTTGTACCTTTATTACTGTCTCCCGTTTGAATTGAATCACAAGTTTTCCCCTTCACAATGTGC
GGCTTGTAATTGGGTAGTATCTCTTGCCTGCTGGTGTCCAAATTGGGATGAAATTGGAAAAGGATGGTTTGAGAATCGGG
CAATGTATATCATGTTCACGAATAATTTGGTTTGTGTAAAAGCAAGTTTAATAGGGTATGGACCCATGAAAAACAATGGG
AACTACTGATGGCTATTCTTATGTCAGTTTATATCCAGAGGTTCAGGTCAAATTTCATTTTTCAGGCGACGTTGAGGCTT
CGTCACATTCA-----------------TTAACCGTGTGCTATGGTTCTGAAGTTAGACAAAATGTTTGTGTTTGTGCAT
CACAACTTGACCGTGGCTTCGCGGTCTCCACTTTCTGCTCAGAAACAACTCAGGATTCAGATTTTGGTAACACTAACTAG
GAGTTGGAAATTCTTTGAAACAGATCTCGAAGTTTCCTGTTGATCGCCAAAAATTCA-----TACATTGCATAAGACAAC
CACATATGAGGTTAGGATAACCGATTGCCACCACATTTCAGACAACTCACAACGAACTACCACTTTCGCGCCTAATGAGT
AACAAATTGCATTG-ATGACAAATTGAGCTCGCAAAGACAACGTTTCTGACAGGTTGGTCCCGCCTGTCAGCCTGATGAG
GCGTCCGCGGACAGACATTGTTAGAAGGCTCCGTCCGTTACGCGGGCGTCAGGTACCCTACGGT-TTAAGGGCGTGCGCC
GTCCGTTTCAATCCCACCCATCCCCAAGACTCCTTTGCCACACTTTGTTGCC------GCTGCTGCCACTGCCTAGTCTC
CGGGTAAGCGCCTCCGCGGTACCCATGGTCTCCTAGGATGATCTCTCGAGCGGCTCGTCGTTCAACGACGACTCCATAAA
CAGCCAGGTTCGTCCTG-
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S-----
---SSS-------------------------------------------------------------S------------
--------------------------------------------------------S-----------------------
---------------------------------SSS--------------------------------------------
-------------------------------S-------------------SSSS-------------------------
--S-----------------------------------------------------------------------------
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----------S---------------------------------------------------------------------
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---S----------S---S-----------------------S--------------------------S----------
---------------------------------------------------------------------S----------
-----------------S-----------------------------------------------------S--------
-------SSSS-SSSSSSSSSSSSSS------------------------------------------------------
------S---------------S-----------------------S------------------S--------------
--------------S------------------------------------------SSSSS--------------S---
---------S---------------------------------------SS-----------------------------
--S---S-SSSSS-S----------------------------------------------S------------------
--------------------S----------------------S-----------------------------S------
S----------------------------------S--------------------S-----------S----------S
-------S-----S------------------------S--------------------------------S--------
--S--------------S
>forward_424
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----TGAAACATGTTGCTGTGGCG--------------------------------------------------------
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>reverse_2263
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----------------------TGCCTCCACTTTCTGCTCAG--------------------------------------
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