>input_sequence_72417
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------------------------------------------------ATGTGCTGCAGCGAGTGCGGCTGCTACGACGC
ATTCTGCGACCGCTGCTGCCCCTGCGTCTCCTCCGGCGCGCGCGACACCATCCTCTGCTGCGCGTGCTGCCTCGCCGTCC
TCGCCGGCGTCGTCCTCCTCCTCGTCCTCCTCTTGGCCTACTGCTTCATCCGCCACGCCGAGGTCGCCGTCGTCGACGCC
TCCCTCACGCGGCTCGCGCTGGCCACGTCCCCGGCCACCGCCTTCGCCTACAACCTCTCGCTCACGCTCACCGTCCGGAA
CAGGAACTGGGCCATGAGCGTCAGGAACACC------CAGCCGCTCGAGGCCGACTACAGCTTCGACGGCCAGCGCTTCG
AGCGGGTCAGGCTCGCCGACGAGGGCTCCACGCACCCCGCTGGCAAGACCCAGGTGCACCACCTCGTCTCCGGCTCCGAC
GGCGCCTACGTCGCGCTCGGCAACGCCGGCGTGGCCGAGTTCAAGGGGGAGAACAAGACGGGGGTGTTCCAGGTGGAGGT
GGCGCTGTCGGGCGAGGTCAGGTACCAGGCGCACTTCACC--------AAGTGCAAGTTCCAGGCCAAATGCCCGCTCAA
GCTGCAGCTCGCGCCGCCCGGCACGCCGGCCGTCGTCTTCGAGAAGGTCAAGTGCAAGCTCGCTCCGGCGTGCAGGTACT
GCTAG---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------
>chr2A_1_TraesCS2A01G482800
ACTAACATAAATGAAAACACGTAATAATAAGCAGGGGCATTTTCACTCTTCAATCTTTACACGCCATTTCTTCATCCTCC
TATAAGATGACAACAATGAAAGAATTAGTAAAGAACACAAAATTTTAATATTTAAATGGGTTCAGAGCGATGTAACATAT
TTAACGCTTTCACTTATGGGCAGTGCCTTCACAAGACAATTAGAGGTAGAGAACTGAAGAAAGCTGACATTTCAAAGGCT
GGCTGATGGCGAAAATTATATAGTCGCAATATACTCCCGCATGGACATTTCAAAGACAATCCTCACTGCCACCGTCACCG
GCACCAGCACGGGCTTGTCCCGATGACCGTATCAGGTGGTGGCGAGGAAGGAGGGGGAAAGGGAATGTCGTAGCAGGGGA
AACCCTTGTCGC-----------------CCCTGAGTAGCCTTGCGGGGCGACACCCAGGCATGGGGAGGAAGGGTTGAT
TAGTTTTTAAGGAAAGTCGCGCACAATTAGGCCCGGTTTGGTTTATAAGTCCTATGCCTTTTTTTAGTCCCAACTTATAA
GTTTCAAGTCCCTAAAAAGTCCCTACCTGTTTGGTTCTTGGGACTTAATATGGACTAAAAGACCATATTACAACTATAAG
TCCCTATAAGTCCTTCCTTGAAAGTCTTATTTTATAAGTTCCAAATCTTCATTTTAAGTCCATATAAGTCTCTTCTATTT
GGTTTAGATGGGACTTATAGGGACTTTTTTAAGTTCTTAAACCCTATGCTCGACGACTTAACCAGTTGACCCATTGACTG
AACATTGGTCCTCCACTCGTTGGTG-----------TTTTGCCGTTGCTGTCAGGGATCCACGTTTCATATCGAGTGAAA
A-ATAAATCCCCAATTCCTCA-----ATCCGCATCGACCGGTAGCTGAAACTCCAAAAAGCCGCCACCCCCTACC-TC--
-----------------AGCCCGGCAGTGCCATCCAAAATCTA-------GCT-AGCTCAAGAGCT--------------
-------ATCCAGCTCAAGATCGAGGC-----TCGGCCACAGGCAGCCATGTGCTGCAGCGAGTGCGGCTGCTACGACGC
ATTCTGCGACCGCTGCTGCCCCTGCGTCTCCTCCGGCGCGCGCGACACCATCCTCTGCTGCGCGTGCTGCCTCGCCGTCC
TCGCCGGCGTCGTCCTCCTCCTCGTCCTCCTCTTGGCCTACTGCTTCATCCGCCACGCCGAGGTCGCCGTCGTCGACGCC
TCCCTCACGCGGCTCGCGCTGGCCACGTCCCCGGCCACCGCCTTCGCCTACAACCTCTCGCTCACGCTCACCGTCCGGAA
CAGGAACTGGGCCATGAGCGTCAGGAACACC------CAGCCGCTCGAGGCCGACTACAGCTTCGACGGCCAGCGCTTCG
AGCGGGTCAGGCTCGCCGACGAGGGCTCCACGCACCCCGCTGGCAAGACCCAGGTGCACCACCTCGTCTCCGGCTCCGAC
GGCGCCTACGTCGCGCTCGGCAACGCCGGCGTGGCCGAGTTCAAGGGGGAGAACAAGACGGGGGTGTTCCAGGTGGAGGT
GGCGCTGTCGGGCGAGGTCAGGTACCAGGCGCACTTCACC--------AAGTGCAAGTTCCAGGCCAAATGCCCGCTCAA
GCTGCAGCTCGCGCCGCCCGGCACGCCGGCCGTCGTCTTCGAGAAGGTCAAGTGCAAGCTCGCTCCGGCGTGCAGGTACT
GCTAGTGATTGGCACGATTGGTGGC---------------------------TAGTGATTTCTGTCGGTAGATTGGGAGG
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------ACCAACTGCAGGTAGATTAGATTGTCCCCA
TCGGTATGCACTTATTTTCTTCTGAAGTTTTCTTGCGGGTAGATCAGTCTTTCAGCAAAACACT----------------
--------------------TAATTTATGGAGTACTCAAACCTAACATCTAACAGCAACT--------------------
------GCAAACATTTCAATCCTATATTCGACAATGAATCATGGATGTAGCACATCATAACAGCCAAAAAACTTCTGAGG
ATCATGTTTATCTTGATAATCATACTAAAATGGCCGTATGCATCTCTACTTTGTGCAGAGGTCGGGGGAGTGAAATTCTC
CCCCATTTTTAATGGTGTCAGGCAGCTTCGGCTTTTCTGGCATGCTCGCCGTCCCCCGCGTCGCCCCCCGCTAGGGCGGC
TCGGGCGGAACCCTAACCCCCACCGCCGCCGGGCTCCACCAACCTCTTCCTTCCCTTCGCCACCATTGGAGGAGGTCGCC
GGGCGATGGCGGCGGAACATGGCCGGTGGCAGCGGCGATGTTCTGTCTGGATCCCGAGGCGACGGCCCTGGATGGTGGTG
GCTGGTGAAGCTAGGGCTT-CCGCGGCGGCATGGCGTGGTGCAGTCCCTTTCTAAGGCGGATCTGTGACGGCGATCTGAT
CTATGGATTGGTTCGGATCAGAGACGGTGACGAGCGCGCGGGATCCATCTCGGCGGCTCTCGCGGCTTGGCGAGGCGGGG
TGGGAACCCTCCTCCTAGGCTCCAGTGGTGGCACACTCAGGCAGTGGCCGGTACGCCAGGGCTCCTACGGTGGCACTGCT
GTTGCGGTTGGTCGCCAGATCTAGGCGGCTAGATCTGAGTCTTTGAAGGCGGTCGAGACGGTGCACAGGTTGTCGGGTGG
ATTACTTGGGACTGATCCGGGTGAAAACCTGGTCTTTGGTCGATGGCCGGAGCCGGTGATGACGATGCCCTTATCATCGT
TTCCTTCATGAAGGCATCATCGAGG
>chr2B_1
ACTGACATAAATGAAAACATGTAATAATAAGCAGGGACATCTTCACTCTTCAGCCTTTACACAACATTTCTTCATCCTCC
TACAAAATGGCAGCAATGAAAGAATTAGTAAATAACACAAAATTTTAATATTTAAATGAGTTTACAGCAATGCAACATAT
TCAATGCTTTCACTTATGGGCAGTGCCTTCACAAGACGATCAGAGATGGAGAACTAAGGAAGACTGATATTTCTAAGGCT
CGCTGATGGCGAAAATTATACAGTCACAATATACGCCCGCGCTG-CAATTCAAAGACAATCCTCGCTGCCACCGTCACCG
GCGCCAGCACAGGCTTGCCCCGACGACCGTCTCAGGTGGCAGCGAGGGAGGAGGGGGAAGAGGAAGGTGGTAGCTGGGGA
--CCCTTGTCGCCCCCCCCCCTCCCCCCACCCCGAGTCGCCTTGCGGGGCAACGTCAGGGCATGAGGTGGGAGGGTTGAT
TAGTTTTTAAGAAAAGTCGCGCACAATTA---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------TGCTCGAAGACTTGACTGGTTGA-CCGTTGACTG
AATATTTGACCAGTA------------------------TGCCGTTGCTGTCAGGAATCCACGTT-CATATCAAGTGAAA
A-ATAAGTGCCCAATCCCCCTACTCTATCCGCGTCGACTGGTAGCTGAAACTCCAAAAAGCCGCCACCACTCCGGTTCCT
GCGTTCGTACTCCACTCCT--------------------------------------------GCCAGTC----------
--CAAG-ATCCAGCTCAAGATCCAGGCAGGG-T------CAGCCAGCCATGTGCTGCGGCGAGTGCGGCTGCTATGACGC
ACTCTGCGACCGCTGCTGCCTCTGCGTCTCCACCGGCGCGCGCGACACCATCCTCTGCTGCGCGTGCTGCCTCGCCGTCC
TCGCCGGCGTCGGCCTCCTCCTCGTCCTCCTCGCGGCCTTCTGCTTCATCCGCCACGCCGAGGTCGCCGTCACCGACGCC
TCCCTCACGCGCCTCGCGCTGGCCGCGTCCCCCGCCACCGCCTTCGCCTACAACCTCTCGCTCACGCTCACCGTCCGGAA
CAAGAACTGGGCAATGAGCGTCAAGAACACC------CAGCCGCTCGAGGCCGACTACAGCTTCGACGGCCAGCGCTTCG
AGCGGGTCAGGCTCGCCGACGAGGGCTCCACGCACCCCGCCGGCAAGACCCAGGTGTACCACCTCGTCTCCGGCTCCGAC
GGCGCCTACGTCGCGCTCGGCAACGCCGGCGTGGCCGAGTTCAAGGAGGAGAACAAGACGGGGGTGTTCCAGGTGGAGGT
GGCGCTGTCGGGCCAGGTCAGGTACCAGGCGCACTTCACC--------AAGTGCAAGTTCCAGGCCAATTGCCCGCTCAA
GCTGCAGCTCGCGCCGCCCGGCACGCCGGCCGTCGTCTTCCAGAAGGTCAAGTGCAAGCTCGCTCCGGGGAGCAGGTACT
GCTAGTGATTGGTACGATTGGTGGC---------------------------TAGTGATTTCTGTCGGTAGATTGGGAGG
ACCAAGTATAGTTGCCGGGAACGGGGAACGATGCCGCGTCCCCTGTACCGGGAACATCGACCCGGATCGAGGGTCGGGGT
CGACACAGGGAACGACGCGATTCGGTGACGGGAACGCGACCCGGAAAGGCAGGTTCGCAGCTCCGTTTCAGTGATCGCAA
ATACACTGGATCTCGACCCAACTTGCCAATGAACGGGAGGCCAAATGGATAGAATCGAGACTTACCTGAAGTCCATGGCA
TGAGCCTTCCGCTGTCGACCAAAACGATGCGCGCCGGAGGCTAGTGTGCATGTGCGAACGCGGTGCCCAGCGGCGCCGGC
GGCTGGTGTCGACGTGCAGACTGCGGATGCGATGCCCAGCGGCGCCGGCGGCTGGTGTCGACGTGCAGACTGCGGATGCG
GTGCCCGGCGGCGCCAACGGCTGGTGTCGACGTGCAGACTGCGGATGCGGTGCTCGGTGGCGGACTGCGGACGCTGTGCT
AGATGGCCGGACGGCGGCGGCGGCTGCCGTGGACCAGCGAATGTGGTGCCCGCTTCCCACTGCCCATCCTCTTGATTGGA
ATTTGGGAATCATACGGGGCAGATTTCATGGAGTAGATTACTTTCTGCTGTCAAAACTTTCCGCGGGATATTTGCACATT
TTCCCTTCCTCTATGTCACCTTCCAAAAAAGAAAATGTGTTTCCACAAAACGAAATGTAATTTCTATATTATTCTCTGAA
ACATGGATAATTTGACAAGGGTTGGGTTCCTCGACCCGACATATCGTTCCCGGGTCATCATTCCCAAATTAATTGGGTCA
CGTTCCATCTATCGATCGGTTCACTTGAAAGATGTATACCCCCACCGTTCCTTACTATTGGCACCTGGCGATCCTCGACC
CTCGTTCCCGTCCCTCGTTCCCATCGTCCCGGGAACTTGGCAACTATGGGACCAACTGCAGGTAGATTGTTC--------
------TGCACTTATTTTCTTCTGAAGTTTTCTTGCGGGTAGATCAGTCTTTCAGCAAAATAAATAAACAAGTAG-----
------------------------------------------TAACATCTAACAGCAATT--------------------
------GCAAACATTTCAATCCTATATTCGACAATGA-------------------------------------------
--------------------------------------------------------------------------------
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-------------------------
>chr2D_5
----ACATAAATGAGAACACATAATAATAAGCAGGGACATCTTCACTCTTCAATCTTTACACGCCATTTCTTCATCCTCC
TACAAGATGGCAGCAATGAAAGAATTAGTAAAGAACACAAAATTTTAATATTTAAATGAGTTTACACCGATGTAACAATC
C-AACACTTTCACTTACGGGCAGTGTCATCACAAGACAATCAGAGGTAGGGAACTGAGGAAGACCGACATTTCAAAGGCT
GGGTGATGGCGAAAATTATATAGCCGCAATATACTCCCGCACTGACATTTCAAAGACAATCCTCGTCGCCACCGTCACCG
GCGCCAGCACAGGCTTGCCCCGACGACCGTCTCAGGTGGCAGCAAGGGAGGAGGGGGAAGGGGAAGGTGGTAGTGGGGGA
AACCCTTGTCGT-----------------CCCCGAGTCGCCTTGTGGGGCGACACGAGGACATGGGGAGGGAGGGTTGAT
TAGTTTTTAAGAAAAGTCGCGCACAATTA---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------TGCTCGACGACATGACCA---GACCCGTTGACTG
AACATTGGTCCTCCACTCGTTGCTATGCCCGGCTTTTTTTGCCGTTGCTGTCAGGGATCCACGTT-CATATGAAGTGAAA
A-ATAAGA-CCCAATCCCCCA-----ATCCGCATCGACTGGTAGCTGAAGATCAAAAAAGCCGCCACCCCCTACC-TCCT
G------------TGTCAGTCCGGCAGTGTCATCCAAGATCTACTAGCTAGCTTAGCTCAAGAGCCAGTCGAAGATTGGG
CTCAAGAAACCAGCTCAAGATCCAGACAGGTCT------CAGCCAGCCATGTGCTGCAGCGAGTGCGGCTGCTACGACGC
ATTCTGCGACCGCTGCTGCCCCTGCGTCTCCTCCGGCGCGCGCGACACCATCCTCTGCTGCGCGTGCTGCCTCGCCGTCC
TCGCCGGCGTCGTCCTCCTCGTCGTCCTCCTCGCGGCCTACTGCTTCATCCGCCACGCCGAGGTCGCCGTCGTCGACGCC
TCCCTCACGCGCCTCGCGCTGGCCGCGTCCCCCTCCACCGCCTTCGCGTACAACCTCTCGCTCACGCTCACCGTCCGGAA
CAGGAACTGGGCCATGAGCGTCAGGAACACG------GAGCCGCTCGAGGCCGACTACAGCTTCGACGGCCAGCGCTTCG
AGCGGGTCAGGCTCGCCGACGAGGGCTCCACGCACCCCGCCCGCAAGACACAGGTGCACCACCTCGTCTCCGGCGCCGAC
AGCGCCTACGTCGCGCTCGGCAACGCCGGCGTGGCCGAGTTCAAGGAGGAGAACAAGACGGGGGCGTTCCAGGTGGAGGT
GGCGCTGTCGGGCGAGGTCAGGTACCAGGCGCACTTCACC--------AAGTGCAAGTTCCAGGCCAAATGCCCGCTCAA
GCTGCAGCTCGCGCCGCCCGGCACGCCGGCCGTCGTCTTCCAGAAGGTCAAGTGCAAGCTCGCTCCGGCGAGCAGGTACT
GCTAGTCATTGGTACGATTGGTGGC---------------------------TAGTGATTTCTGTCGGTAGATTGGGAGG
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------ACCAACTGCAGGTAGATTAGATTGTCCCCA
TCGGTATGCACTTATTTTCTTCTGAAGTTTTCTTGCGGGTAGATCAGTCTTTCAGCAAAATACT----------------
--------------------TAATTTATGGAGTACTCAAACCTAACATCTAACAGCAATT--------------------
------GCAAACATTTCAATCCTATATTCGACGATGAATGATGGACGTAGCACATCATCCACAGCAAA------------
--------------------------------------------------------------------------------
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-------------------------
>chr2D_837
--------------------------------------------------------------------------------
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----------------------------------------------------------------TTCACATCGAGTGAAA
AAGTAAATCCGCAATTCCCCA-----ATCCGCATCGACTGGTAGCTGAAACTCCAAAAAGCCGCCACCCCCTACC-TCCT
GCGTTCGTCCTCCTGTCAGTCCGGCAGTGTCATCCAAGATCTA-------GCTCAGCTCAAGAGCCAGCC----------
--CAAGAAACCAGCTCAAGATCCCGGCAGGG-TCAGCCACAGCCAGCCATGTGCTGCAGCGACTGCGGCTGCTACGACGC
ATTCTGCGACTGCTGCTGCCCCTGCGTCTCCTACGACGCGCGCGAGACCATCCTCTGCTGCGCGGCCTGCCTCGCCGTGC
TCGCCGGCGTCGTCCTCTTCGCCGTCCTCCTCGCGGCCTACGGCTTCATCCGCCGCCCCGAGGTCGCCGTCGTCGACGCC
TCCCTCACGCGGCTCGCGCTGGCCACGTCCCCCGCCACCGCCTTCGCCTACAACCTCTCGCTCACGCTCACCGTCCGGAA
CAAGAACTGGGCCATGAGCGTCAAGAACACG------GAGCCGCTCGAGGCCGACTACAGCTTCGACGGCCAGCGCTTCG
AGCGGGTCAGGCTCGCCGACGAGGGCTCCACGCACCCCGCCGGCAAGACCCAGGTGTACCACCTCGTCTCCGGCTCCGAC
GGCGCCTACGTTGCGCTCGGCAACGCCGGTGTCGCCGAGTTCAAGGAGGAGAACAAGACGGGGGTGTTCCAGGTGGAGGT
GGCGCTGTCGGGCGAGGTCAGGTACCAGGCGCACTTCACC--------AAGTGCAAGGTCCTGGCCAAGTGCCCGCTCAA
GCTGCAGCTCGCGCCGCCCGGCACGCCGGCCGTCGTCTTCCAGAAGGTCAAGTGCAAGCTCTCTCCGGCAGACAAGAACT
GCTAGTGATTACTACGATTCGTGTC---------------------------T---------------------------
--------------------------------------------------------------------------------
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-------------------------
>chr2A_838
--------------------------------------------------------------------------------
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-----------------------------------------------------------------TCACATCGAGTGAAA
A-GTAAATCCGCAATTCCCCA-----ATCCGTATCGACTGGTAGCTGAAACCCCAAAAAGCCGCCACCCCCTACC-TCCT
GCCTTCGTCCTCCCGTCAGTCCGGCAGTGTCATCCAAGATCTA-------GCTCAGCTCAA-------------------
------------------GATCCAGGCAGGG-TAAGCCACAGCCAGCCATGTGCTGCAGCGAGTGCGGCTGCTACGATGC
ATTCTGCGACTGCTGCTGCCCCTGCGTCTCCTACGACGCGCGCGAGACCATCCTCTGCTGCGCGGCCTGCCTCGCCGTGC
TCGCCGCCGTCGTCCTCTTCGCCGTCCTCCTCGCGGCCTACGGCTTCATCCGCCGCCCCGAGGTCGCCGTCGTCGACGCC
TCCCTCACGCGGCTCGCGCTGGCCACGTCCCCCGCCACCGCCTTCGCCTACAACCTCTCCCTCACGCTCACCGTCCGGAA
CAAGAACTGGGCCATGAGCGTCAGGAACACC------CAGCCGCTGGAGGCCGACTACAGCTTCGACGGCCAGCGCTTCG
AGCGGGTCAGGCTCGCCGACGAGGGGTCCACGCACCCCGCCGGCAAGACCCAGGTGTACCACCTCGTCTCCGGCTCCGAC
GGCGCCTACGTCGCGCTCGGCAACGCCGGCGTCGCCGAGTTCAAGGAGGAGAACAAGACGGGGATGTTCCAGGTGGAGGT
GGCGGTGTCGGGCGAGGTCAGGTACCAGGCGCACTTCACC--------AAGTGCAAGTTCCAGGCCAAATGCCCGCTCAA
GCTGCAGCTCGCGCCGCCCGGCACGCCGGCCGTCGTCTTCGAGAAGGTCAAGTGCAAGCTCGCTCCGGCAGACAAGAACT
GCTAGTCATT----------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------
>chr2B_965
--------------------------------------------------------------------------------
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-------ATCCAGCTCAAGATCCAGGCAGGC-TCAGCCGAAGCCAGCCATGTGCTGCAGCGAGTGCGGCTGCTACGACGC
GTTCTGCGACTGCTGCTGCCCCTGCGTCTCCCACGACGCGCGCGAGACCATCCTCTGCTGCGCGGCCTGCCTCGCCGTCC
TCGCCGGCGTCGTCCTCTTCGCCGTCCTCCTCGCGGCCTACGGCTTCATCCGCCACGCCGAGGTCGCCGTCACCGACGCC
TCCCTCACGCGGCTCGCGCTGGCCACGGCCCCCGCCACCGCCTTCGCCTACAACCTCTCGCTCACGCTCACCGTCCGGAA
CAAGAACTGGGCCATGAGCGTCAAGAACACC------CAGCCGCTCGAGGCCGACTACAGCTTCGACGGCCAGCGCTTCG
AGCGGGTCAGGCTCGCCGACGAGGGCTCCGCGCACCCCGCCGGCAAGACCCAGGTGTACCACCTCGTCTCCGGCTCCGAC
GGCGCCTACGTCGCGCTCGGCAACGCCGGCGTGGCCGAGTTCAAGGAGGAGAACAAGACGGGGGTGTTCCAGGTGGAGGT
GGCGCTGTCGGGCGAGGTCAGGTACCAGGCGCACTTCACC--------AAGTGCAAGTTCCAGGCCAAGTGCCCGCTCAG
GCTGCAGCTCGCGCCGCCCGGCACGCCGGCCGTCGTCTTCCAGAAGGTCAAGTGCAAGCTCGCTGCAGCTGATAAGAACT
GCTAGTGATTACTACGATTCGTGGCTTCCTTTCTCGTTTCTTTTTTCTTCAGTAGTGATTTCTGTTTGTAGATTTTAATC
GGA-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------GGAACCAACTGCAGGTAGATTAGATTCTCCCCA
TTGGTATGCAAACTGTTTTCTGATTTTTTTTCTTCCAAGTAGATTAGCGTTTCAACCATGAAAAATCCCTTGATTGTTCT
TGTGGCTTAACCATCTTGGCTATCTTGCTGAGCACATACTCCTAAGGTCTTTCATCAGTTGGTTGCCAAAGGAAGCAAGC
CAGAAAGCAAACATTTCAATCCTATATTCGACAATGATTGATGGATGTAGCACATCAT----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------
>chr3A_993
AGGC----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------GCCATGTGCTGCAGCGAGTGCGGCTGCTACGACGC
ATTCTGCGACCGCTGCTGCCCCTGCGTCTCCTACGACGCGCGCGAGGCCATCCTCTGCGGCGCCGCCTGCCTCGCCGTCC
TCGCCGGGGCCGTCCTCCTGGCCGTGCTCGTCGCCGCCTACGGCTTCATCCGCCACGCCGAGGTCACCGTCAGGGACGCC
TCCCTCACGCGCCTCGCGCTCGCCGTCTCCCCGACCACCGCGTTCGCCTACAACCTCTCGCTCACGCTCACCGTCCGTAA
CAAGAACTGGGCCATGAGCGTCAGGAACACC------AAGCCGCTCGAGGCCCGCTACAGCTTCGACGGCCAGCCCTTCG
AGCGGATCAGGCTCGCCGAGGAGGGGTTCACGCAACCCCCTGGCGACACCCAGGTGTACCACCTCGTCTCCGGCGACGAC
GGCGGCTACGTCGCGTTCGGCAACGCCGGCGTGGCCGAGTTCAAGGCGGAGAACGCGACGGGGATGTTCAAGGTGGAGGT
GGCGGTGTCGGGCGAGGTCAGGTACCAGGCGCACTACACC--------AAGTGCAAGTTCGAGGCCAAATGCCCGCTGGT
GCTGCCGCTCGCGCCGCCGGGCACGCCGGCCGTCGTGTTCCAGGAGGTCAAGTGCAAGCCCGTCACAGCCGACAAGAACT
GCTAGTGA------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------------------------
>chr3D_997
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------AGCCATGTGCTGCAGCGAGTGCGGCTGCTACGACGC
ATTCTGCGACCGCTGCTGCCCCTGCGTCTCCTACGACGCGCGCGAGGCCATCCTCTGCTGCGCCGCCTGCCTCGCCGTCC
TCGCCGGCGCCGTCCTCCTGGCCGTGCTCCTCGCCGCCTACGGCTTCATCCGCCACGCCGAAGTCATCGTCCGGGACGCC
TCCCTCACGCGCCTCGCGCTCGCCGTCTCCCCGGCCACCGCGTTCGCCTACAACCTCTCGCTCACGCTCACCGTCCGGAA
CAAGAACTGGGCCATGAGCGTCAAGAACACC------AAGCAGCTCGAGGCCCGCTACAGCTTCGACGGCCAGCTCTTCG
AGCGGATCAGGCTCGCCGAGGCGGGGTCCACGCAGCACGCCGGCGACACCCAGGTGTACCACCTCGTCTCCGGCGACGAC
GGCGGCTACGTCGCGCTCGGCAACGCCGGCGTGGCCGAGTTCAAGGCGGAGAACGCGACGGGGATGTTCAAGGTGGAGGT
GGCGGTGTCGGGCGAGGTCAGGTACCAGGCGCACTACACC--------AAGTGCAAGTTCGAGGCCAAATGCCCGCTGGT
GCTGCAGCTCGCGCCGCCGGGCACGCCGGCCGTCGTGTTCCAGGAGGTCAAGTGCAAGCCCGTCACAGCCGACAAGAACT
GCTAGTGA------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>chr3B_997
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------AGCCATGTGCTGCAGCGAGTGCGGCTGCTACGACGC
ATTCTGCGACAGCTGCTGCCCCTGCGTCTCCTACGACGCGCGCGAGGCCATCCTCTGCTGCGCCGCCTGCCTCGCCGTCC
TAGCCGGCGCCGTCCTCTTGGCCGTGCTCCTCGCCGCCTACGGCTTCATCCGCCACGCCGAGGTCACCGTCAGGGACGCC
TCCCTCACGCGCCTCGCGCTCGCCGTCTCCCCGGCCACCGCGTTCGCCTACAACCTCTCGCTCACGCTCACCGTCCGGAA
CAAGAACTGGGCCATGAGCGTCAAGAACACC------AAGCCCCTCGAGGCGCACTACAGCTTCGACGGCCAGAGCTTCG
AGCGGATCAGGCTCGCTGAGGAGGGGTTCACGCAACCCCCTGACGACACCCAGGTGTACCACCTCGTCTCCGGCGACGAC
GGCCGCTACGTCGCCCTCGGCAACGCCGGCGTGGCCGAGTTCAAGGCGGGGAACGCGACGGGGGTGTTCAAGGTGGAGGT
GGCGGTGTCGGGCGAGGTCAGGTACCAGGCGCACTACACC--------AAGTGCAAGTTCGAGGCCAAATGCCCGCTGGT
GCTGCAGCTTGCGCCGCCAGGCACGCCGGCCGTCGTGTTCCAGGGGGTCAAGTGCAAGCCCGTCACAGCCAACAAGAACT
GCTAGTGA------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>chrUn_1135
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------CGTCCTCCTCGTGGCCTACGGCTTCATCTGCCACGCCGAGGTCGCCGTCGTCCACGCC
TCCCTCACGCGCCTCGCACTGGCCACGTCCCCCGCCACCGCCTTCGCCT-CAACCTCTCACTCACGCTCACCGTCCGGAA
CAAAAACTGGGCCATGAGCGTCAGGAACACCCAGGCAGAGCCGCACGAGGCTGACTACAGCTTCGACGACCAGCGCTTCA
AGCGGGTCAGGCTCACCGACGAGGGGTCCACGCGCCCCGCCGGCAAGACCCAGGCGAACCACCTCGTCTCCGACGCCGAC
AGTGCCTACGTCGCGCTCGGCAACGCCGGCGTGGC-GAGTTCAAGGAGGAGAACAAGACGGGGGTGTTCCAGGTGGAGGT
GGCGCTGTCGGGCGAGATAAGGTACGAGGTGCACCGTGCACTTCACCAAAGTGTAAGTTCCTGGCCATATGCCCGCTCAA
GCTGCAGCTTACGCCGCCCGGCACACCGGCCGTCCTGTTCCAGAAGGTCAAGTGCAAGCTCGCTCCGCCAGACAAGAACT
GCTTGTGATTACTAAGATTCGTGGC-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------
>chr3D_2147
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------------GGTGGAGGTCGCA
-GTGGCCGGCGGCGGAACATGGCCGGTGGCAGTGGCAATGTTCTGTCTGGATCCCGGGGCGGCGGCCCTGGAGGGTGGCG
GCCGGTGAAGCTGGGGCTTTCCGCGGAGGCATGGCGTGGTGCAGTCCCTGTCCAAGGCGGGTCTGTGACGGCGATCTGAT
CTACGGATTGGTTCGGATCAGAGACGGTGACGAGCACGCGGGATCCATCTTGGCGGCTCTCGCGGCTTGGCGAGGCGGGG
TGAGAGCCCTCCTCCTAGGCTCCAGTGGTGGCACACTCAGGCAGTGGCCGGTGCGCCAGGGCTCCTACGGTGGCACTGCT
GTTGCGGTTGGTCGCCGGATCTAGGCGGCTAGATCCGGGGCTTTGAAGGTAGTCGAGACGATGCACAGGTTATCGGGTGG
ACTACTTGGGACGGATCCGGGTGAAAACCTGGTCTTCGGTCGATGGCCGGAGCCGGTGATGACGATGTCCTTATCATCAT
TTCCTTCATGAAGGCATCATCGAGG
>chr2D_2157
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------------------------GCC
GGTCGGCGGCGGCGGAACTTGGACGGTGGCAGCGGCAATGTTCTGTCTGGATCCCGGGGCGGCGGCCCTGGAGGGTGGTG
GCCGGTGAAGCTAGGGCTTCCCGCGGCGGCATGGCGTGGTGCAGTCCCTGTCCAAGGCGGATCTGTGACGGCGATCTG--
CTATGGATTGGTTCGGATCAGAGACGGTGACGAGCGCGCGGGATCCTTCTCGGCAGCTCTCGCGGCTTGGCGAGGCGGGG
TGGGAGCCCTCCTCCTAGGCTCGAGTGGTGGCACACTCAGGCAGTGGCCGGTGCGCCAGGGATCCCACGGTGGCACTGTT
GCTGCGGTTGGTCGCCGGATCTAGGCGGCTGGATCTGGGGCTTTGAAGGCGGTCGAAACGGTGCACAGGTTGTTAGGTGG
ATTTCTTGGGACGGATCTGGGTGAAAACCTGGTCTTCGGTCGATGGCCGGAGCCGGTGATGACGATGCCCTTATCATCGT
TTCCTTCATGAAGGCATCATCAAGG
>chr2D_2157
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-----------------------------------------------------------------------------GCC
GGTCGGCGGCGGCGGAACTTGGCCGGTGGCAGCGGCAATGTTCTATCTGGATCCCGGGGCGGCGGCCCTGGAGGGTGGTG
GCCGGTGAATCTAGGGCTTCCCGCGGCGGCATGGCGTGGTGCAGTCCCTGTCCAAGGAGGATCTGTGACGGCGATCTG--
CTATGGATTGGTTCGGATCAGAGACGGTGACAAGCGCGCGGGATCCTTCTCGGCGGCTCTCGCGGCTTGGCGAGGCGGGC
-GGAAGCCCTCCTCCTAGGCTCCAGTGGTGGCACACTCAGGCAGTGGCCGGTGCGCCAGGGATCCCACGGTGGCACTGTT
GCTGCGGTTGGTCGCCGGATCTAGGCGGCTGGATCTGGGGCTTTGAAGGCGGTCGAGACGGTGCACAGGTTGTTGGGTGG
ATTTCTTGGGACGGATCCGGGTGAAAACCTGGTCTTCGGTCGATGGCCGGAGCCGGTGATGACGATGCCCTTATCATCGT
TTCCTTCATGAAGGCATCATCGAGG
>chr3D_2157
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-----------------------------------------------------------------------------GCC
GGTCGGCGGCTGCGGAACATGGCCGGTGGCAGCGGCGATGTTCTGTCTGGATCCCGGGGCGGCGGCCCTGGAGGGTGGCG
GATGGTGAAGCTAGGGCCTCCCGCGGCGGCATGGCGTGGTGCAGTCCCTGTCCAAGGCGGGTCTGTGACGGCGATCTG--
CTATGGATTGGTTCGGATCAGAGACGCTGACGAGCGCGCGGGATCCATCTCGGCGGCTCTCGCGGCTTGGCGAGGCGGGG
TGGGAGCCCTCCTCCTAGGTTCCAGTGGTGGCACACTCAGGCAGTGGCCGGTGCGCCAGGGCTCCTATGGTGGCACTGTT
GTTGCAGTTGGTCGCCGGATCTAGGCGGCTGGATCTGGGGCTTTGAAGGCGGTCGAGACGGTGCACAGGTTGTCGGGTGG
ATTTCTTGGGACGGATCCGGGTGAAAACTTGGTTTTCGGTCGATGGCCGGAGCCGGTGATGACGATGCCCCTATCATCGT
TTCCTTCATGAAGGCATCATCGAGG
>chr3D_2157
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-----------------------------------------------------------------------------GCC
GGTCGGCGGCGGCAGAACTTGGCCGGTGGCAGCGGCAATGTTCTGTCTGGATCCCGGGGCGGCGGCCCTGGAGGGTGGTG
GCCGGTGAAGCTAGGGCTTCCCGCGGCGGCATGGCGTGGTGCAGTCCCTGTCCAAGGCGGATCTGTGACGGCGATCTG--
CTATGGATTGGTTCGGATCAGAGAAGGTGACGAGCGCGCGGGATCCTTCTCGGCGGCTCTCGCGGCTTGGCGAGGCGGGG
TGGGAGCCCTCCTCCTAGGCTCAAGTGGTGGCACACTCAGGCAGTGGCCGGTGCGCCAGGAATCCCACGGTGGCACTGTT
GCTGCGGTTGGTCGCCGGATCTAGGCAGCTGGATGTGGGACTTTGAAGGCGGTCGAGACGGTGCACAGGTTGTTGGGTGG
ATTTCTTGGGACGGATCCGGGTGAAAACCTGGTCTTCGGTCGATGGCCGGAGCCGGTGATGACGATGCCTTTATCATCGT
TTCCTTCATGAAGGCATCATCGAGG
>chr7A_2157
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-----------------------------------------------------------------------------GCC
GGTCGGCGGCGGCGGAACATGGCCGGTGGCAGCGGCGATGTTCTGTCTGGATCCCGGG-CGGCGGCCCTAGATGGTAGCG
GCTGGTGAAGCTAGGGCTTCCCGCGGCGGCATGGCGTGGTGTAGTCCCTGTTCAAGGTGGATCTGTGACGGCGATCTGAT
CTACGGATTGGTTCGGATCAGAGACAGTGACGAGCGCGCGGGATCCATCTCGGCGGCTCTCGCGGCTTGGCGAGGCGGAG
TGGGAGCCCTCCTCCTAGGCTCCAGTGGTGGCACACTCAGGCAGTGGCTGGTGCACCAGGGCTCCTACGGTGGCACCGCT
GTTGCGGTTGGTCGCCGGATCTAGGCGGCTAGATCTGGGGCTCTGAAAGCGGTCGAGACGGTGCACAAGTTGTCGGGTGG
ATTACTTGAGACGGATCCGGGTGAAAACCTGGTCTTCGGTCGATGGCCGGAGCCGGTGATGACGATGCCCTTATCATTGT
TTCCTTCTTGAAGGCATCATCAAGG
>chr1D_2157
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-----------------------------------------------------------------------------GCC
GGTCGGCGGCGGCGGAACATGGCCGGTGGCAGCGGCAATGTTCTGCCTGGATCCCGGGGCGGAGGACCTGGATGGTGGCG
GTTGGTGAAGCTAGGGCTTCCCGCGGCGGCATGGCGTGGTGCAGTCCCTGTCCAAGGCGGATCTGTGACGGCGATCTGAT
CTACGGATTGGTTCGGATCAGAGACGGTGACGAGCACGCGGGATCCATCTCGGCGGCTCTCGCGGCTTGGCGAGGCGGGG
TGGGAGCCCTCA-CCTAGGCTCTAGTGGTGGCACACTCAGGCAGTGGCCGATGCGCCAGGGCACCTACAGTGGCACTGTT
GTTGCGGTTGGTCGCCGGATCTAGGCGGCTAGATCTGGGGCTTTGAAGGCGGTCGAGACGATGCACAGGTTGTCGGGTGG
ACTGCTTGGGACGGATCCGGGTGAAAACCTGGTCTTCGGTCGATGGCCGGAGCCGATGATGACGATGCCCTTATCATCGC
TTCCTTCATGAAGGCATCATCGAGG
>chr1A_2157
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-----------------------------------------------------------------------------GCC
GGTCGGCGGCGGCGGAACATGGCCGGTGGCAGCGGCGAGGTTCTGTCTGGATCCTGGGGCGGCGGCCCTGGAGGGTGGCG
GCTGGTGAAGCTAGGGCTTCCCATGGCGGCATGGTGTGGTGTAGTCCCTGTCCAAGGCGGATCTGTGACGGCGATCTG--
CTATGGATTGGTTCGGATCAGAGACGGTGACGAGCGCGCGGGATCCTTCTCGGCGGCCCTCGCGGCTTGGCGAGGCGGGG
TGGGATCCCTCCTCCTAGGCTCCAGTGGTGGCACACTCAGGCAGTGGCCGGTGCGCCAGGGCTCCCACGGTCGCACTGTT
GTTGCGGTTGGTCGCCGGATCTAGGCGGCTGGATCTGGGGCTTTGAAGGCGGTCGAGACGGTGCACAGGTTGTTGGGTGG
ATTTCTTGGGACGGATCCGGGTGAAAACCTAGTCTTCGGTCGATGGGCGGAGCCGGTGATGACGATGCCCTTATCATCGT
TTCCTTCATGAAGGCATCATCGAGG
>SNPs
---S--------------------------------S---S---------------------------------------
--S------S--S---------------------------------------------S---S-S---------------
-S--------------------------------------S----------------S---SS-----------------
-----------------------------------------SS---------------------S---------------
--S-------S------S-----S------S--------SS------S-----------S-----S--S-----S-----
--------------------------------S----S------------------SS------------S---------
-----------S-----------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------S------------S-------
----------------------S-S-------------------------------------------------------
------------------S-------------------S-----------------------------------------
-------------------S---------S-------S---------------------------S--------------
----------------------S-----------S-------S-------------------------------------
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--------------------------------S-----------------------------------------------
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----------------------------------------------S---------------------------------
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----------------------------------------------------------------------S---------
------------S-------------------------------------------------------------------
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------------------------------------------------------------S-------------------
----------------------------------------------------------S---------------------
---------------------------------------S------------------SSSSSS----SSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S----------
--S--SS-------------------------------------------------S----S------------------
-------------------------------------------------S--S---------------------------
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-----S----------------------------------------------S---------------------------
----------------S--------------------S-S----------------------------------------
------------S-----------------------S-------------------------------------------
-------------------------
>forward_520
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--------------------GCACAATTAGGCCCGGTTTG----------------------------------------
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>reverse_3236
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-----------------------------------CCACCAACCTCTTCCTTCCC-------------------------
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