>input_sequence_72373
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------TCCCATTCCTTCCTCTCCCACGTCTCCAGCTCC
TCCTCCTTCCCTTCCTCGCGCGCGCGCTCCTCTTCTCCGCTCTCCCCTCCTCGTGCGCTCGTGTTCACCGAGATCAGCCA
AACGGCCACGCGCAAGCTCGCCATGGAGCAGACCGGCGGCAAGGGCGACCACGACTCGCGGCTGATGCGCGACCTCTGCA
CGCTGCTCGTCACCATCATCGCCCCCGTCGCGGCGGCGTCCTCGGTGGACTCGCCCCGGAGGCCCGTGGCGCGGCGCCCG
CGGGGCGGCATGTCACCGGCGAGCGCGGCGTCGATGCTTCTGGGCGCGTCGATGGCGCTGATGCTGTGCGGGTCCGTGAC
GTTCGCCATCGGTTTCCTCCTCATGCCGTGGGTCGCCGGCGTCGCGCTGCTCTTCGGCTTCGCCGGCGTCATCTCCACCC
TCTCCTCCGGCCTCCTCCCCTCGTCCTCGCCGTCCTCCTCCAAGGATAAGGAGCGACGGCTGCTGATGCCGACGCAAGGG
CGTGTCCGTGCCTCTGCC---CCGATGAGCTCTGTCCCGGATAAGCTCGTGGCGTGGCGTTGATCTGTTCTTGAAATTTA
GTTAATTACTAATCAATTAGGGCGGGATTAGGATGGGTAATTCCTGTGTAAAAAACGCTTCCCTTTTGCTGTTGT-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--
>chr3B_1_TraesCS3B01G469600
GGAGGTTTTTTCTCTGCGTGTTCCTGGGCCGGCCCACCAGATAGCGACAGTGGGGGCCAGTTGCCTGTACCGGCGCTTAA
TGCGCCGTATAGGACCTCCCCCTGTAGCGATAGGTTCTAATTTCCGAGCGTACTCAGCAAACCGTTTATTTAGCGGTGGC
AGGACGTTGTAAATACGGTAAACTTCAGCTTTTCCAATCGGTGGAGTTGGGCCTTCCTCGCTCCAGATTTTTTCAGTAGG
ATCGACTACAGCTTTGCGAAGCCAGCTTCTGGAGGTTATTTCGTTCGGCTCTTATCTGCTCTAGGAAATTGTGAAGTGTG
GAGCGGGAGGAGATCAGAACACGCCCTGAAACCCTATTACTTTGGAATAAAACTCTTTTGCCCCCCAAAAAATACCCAAA
GTCCGACATTAACATTTCTCAATAAGATGCACCGCAAAGATTTGGCATGT--GGCCGGCCAGCTCTCGCAGCTTCCCCAC
CTCCTCGTCGCCGCAGCCCACACGTCGGCTGACGCTTCCCGTTCCGTCCGCCATCATTTTTCCGTTCCTCGGGAACGGCG
CGATGACGTGCCCCGCAACATTTCTC---CGGCGGAAAGCCCCGCAGCCGCACAGAAACGCTTCC-CCCGCCGCCGCGTG
GGCCGACCTGTCAGGGAATGGATAACGCCCAATCAACCAGACGATGCGGCCATGACTCGGCCGAGGACGCGTGCAGCTTT
TCTTAACCGGCCTTCGCCCTATCCGGAACGCCCATCATTTGCCTCGACCCAACCGAATACCCAAAACGGCATTCGTCCTC
CCCCCAGTCGCTGACGGCGGGCCGGGACGCGTCCTGGTCCCGCATGCCTGCGTCTAAACAGGCCGC-GGGGTCCGGAGTT
TGTTGGTTCGTTAGGTGCCGTGCGTGGACTGTGATGCTGACCGGGCCCTAAGCGGGGATCGGAGGAGCGGGGCCCGCGCG
AGCCACTGGGCCGTGGGGCATATATACGCCCTTTTTCCGCCGGCGAATCCCATTCCTTCCTCTCCCACGTCTCCAGCTCC
TCCTCCTTCCCTTCCTCGCGCGCGCGCTCCTCTTCTCCGCTCTCCCCTCCTCGTGCGCTCGTGTTCACCGAGATCAGCCA
AACGGCCACGCGCAAGCTCGCCATGGAGCAGACCGGCGGCAAGGGCGACCACGACTCGCGGCTGATGCGCGACCTCTGCA
CGCTGCTCGTCACCATCATCGCCCCCGTCGCGGCGGCGTCCTCGGTGGACTCGCCCCGGAGGCCCGTGGCGCGGCGCCCG
CGGGGCGGCATGTCACCGGCGAGCGCGGCGTCGATGCTTCTGGGCGCGTCGATGGCGCTGATGCTGTGCGGGTCCGTGAC
GTTCGCCATCGGTTTCCTCCTCATGCCGTGGGTCGCCGGCGTCGCGCTGCTCTTCGGCTTCGCCGGCGTCATCTCCACCC
TCTCCTCCGGCCTCCTCCCCTCGTCCTCGCCGTCCTCCTCCAAGGATAAGGAGCGACGGCTGCTGATGCCGACGCAAGGG
CGTGTCCGTGCCTCTGCC---CCGATGAGCTCTGTCCCGGATAAGCTCGTGGCGTGGCGTTGATCTGTTCTTGAAATTTA
GTTAATTACTAATCAATTAGGGCGGGATTAGGATGGGTAATTCCTGTGTAAAAAACGCTTCCCTTTTGCTGTTGTTGTAC
GTTTCCAGTCGCAAGAGATGCTGATGATTTA---CTACCGGCACAAGCAACATTTATTATATGTGTT-ATTGTTTCGTGT
CGAGAATTCCGTGCACGGATGGCAA-CGTGCTTCGCTACCCTGCTTCGTCAGACCAGAAAACTGAGACG-----------
----TATACATCTCA--------GTCTGCGTCGATCTCGTAATTTCTGCAGTGTGTACTACTTTGCCACGGCAACTTT-T
GTGTTTTGTCGTGGTGAGACGTGAGGCCAACTCCACCGCGTGAACATATCCTATCCGGT-CCGTCCGTTTAGTATAAAAA
GGACAAATCGGGCCGCCCAGCGTGCGGGAGCAAATGGATTTTTGTCTGTTTTGTGTCCGTTTTTGACCCATCTGCGGTCC
AAGTTTGCGCCGCTTTTGGGGTGAAACGGACGTCACGCGGATGCGCCGGCCGTCTGCGCGT-TCCTCCCCTGACCCGCCT
GTCGGTGGCACAGGACGTGCCTGTTTCTATCCG-CCCCCTCCCTCCTTCCGGCCGCACCCCACTCCACTTTTCTCCATTC
TTCCCACTG-TTCCCC-----TCGCCGCCGCCGCCGCTCCCATTGCAGCCGTGCAGCCCGGACGCGCGCTCGCCCAGCCC
CTTCCCC-TCGGTGCCGCCGAGCTACCCAAACCACGGCCACCTGGTTTGCGCACCCGCCGGTCGGATTTGGGGCGGATCC
GGTCGGTCTTGAGCTCGCCCAGCTGTGGGAGGCCGGGCACCTCGCCGGAAGGCCCTGGCA-------GGGCCGCAAGGCC
ACATGCAGGCAGTGGCTCGTCCTCTGGCCGCTCGAATCTGCACCGTCGGTGGTTCGTCGGCAGATACACGAATGGTGGCC
GGCCGGGCTCGGTGCTTGCCCAAAAGCTCGTCGGCGCACCGTTGCCACTCACTAAGTGCGAACACTGCCCAAGGATGGTC
GTGCGCCGCGTGTCTACAACGCCGG-ACATCCCGGATGGGTGTTCATCAAGTGCTTAAACGATGGGGTATGCGCTCTTTT
TA
>chr3A_346
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------CTGTAATCCTATTATTTTGGAATAAATCTCTTTTGCCAAATAAGATACC------
-----GCATTAACATTTCTCAAAAAGATGCACCGCAAAGATTTGGCATGTGGGGCCGGCCAGCTCTCGCAGCTTCCCCAC
CTCCCCGTCGCCGCAGCCCGCACGTCGGCTGACGCTTCCCGTTCCGTCCGCCATCATTTTTCCGTTCCTCGGGA-CGACG
CGGTGAGGTGCCCCGCAACAGTTCTC---CGCCGGAAAGCCCCGCAGCCACACAGAAACGCCTCC-TCCGCCGCCGCGTG
GGCCAACCTGTCAGGGAACGGATAACGCCCAATCAACCAGACGATGCGGCCATGACTCGGCCGAGGACGCGTGCAGCTTT
TCTTTTCTCTTCTTTACCCTATCCGGAGCGCCCATCATC-GCCGCGACCCAACGGAATGCCCAAAACGGCATTCGCTCTC
GTCCCACTCGCTGACGGCGGGCCGGGGCACGTCCTGGTCCCGCATGTCTGCGTCCAAACAGGCCGC-GGGG-CCGCAGTT
TGTTGGTTCGTTAGGTGCCGTGCGTGGACTGTGATGCTGACCGGGCCCCAACTGGATACCGGAGGAGCGGGGCCCGCGCG
AACGACTGGGACGTGGGGCATATATACGCCCTTTTTCCGCCGGCGATTCCCATTCCTTTTCCTCT--CGTCTCCAGCTCC
TCCTTCCTTCCT------CGCGCGCTCTCCTC------------CTCTCCTCGTGCGCTCGTGTTCACCAAGATCAGCCA
AACGGCCACGCGAGAGCTCGCCATGGAGCAGGCCGGCGGCAAGGGCGACGACGACTCGCGGCTGATGCGCGACCTCTGCA
CGCTGCTCGTCACCATCATCGCCCCCGTCGCGGCGGCGTCCTCGACGGATCCGCCCCCGAGGCCCGTGGCGCGGCGCCCG
CGGGGCAGCATGTCGCCGGCGGGCGCGGCGTCGATGCTGCTGGGCGCGTCGATGGCGCTGATGCTGTGCGGGTCCGTGAC
GTTCGCCATCGGCTTCCTCCTCATGCCGTGGGTCGCCGGCGTCGCGCTGCTCTTCGGATTCGCCGGCGTCATCTCCACCC
TCTCCTCCGGCCTCCTCCCCTCGTCCTCCTCCTCCTCC---------AAGGAGCAACGGTTGCGGACGCCGACGCAAGGG
CGTGTCCGCGTCTCTGCTCCTCCGATGAGCTCTGTTCCGGATAAGCTCGTGGCATGGCGTTGAGCTGTTCTTGAAATTTA
GTAGTTAATTAATTAATTAGGGCGGGGTTAGGAT-GGTAATTCCTGTGTAAAAAA-GCTTCCCTTTTGCTGTTGTTGTAC
GTTTCCAGTCGCAAGAGATGCTGATGATTTAGTACTACCGGCACAAGCAACATTTGTTATATGTGTTGATTGTTTCGTAT
CGAGAATTCTGTGCACGGATGGCAA-CGTGCTTCGCTCCTCTGCTTCGTCAGACCAGAAAACTGAGACGTCTCTCCGGTG
CACGTATATATCTCT--------GTCTGCGTCGATCTCGTAATTTCTGCAGTGTGTACTACTTTGCCACGGCAACTATGT
GTGTTTTGTCGTGGTGAGACGTGAG-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--
>chr3D_393
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------TACCCAAA
GTCCGGCATTAACATTTCTCGAAAAGATGCACCGCAAAGATTTGCCATGTGGGGCCGGCCAGCTCTCGCAGCTTCCCCAC
CTCCCCGTCGCCGCAGCCCGCACGTCGGCTGACGCTTCCCGTTTCGTCCGCCATCATTTTTCCGTTCCTCGGGAACGGCG
CGATGACGTGCCCCGCAACAGTTCTTCTGCGCCGGAAAGCCCCGCAGCCACACAGAAACGCTTCCCCCCGCCGCCGCGTG
GGCCGACCTGTCAGGGAACGGATAACGCCCAATCAACTAGACGATGCGGCCATGACTCGGCCGAGGACGCGTGCAGCTTT
TCTTTTCTCTTCTTTACCCTATCCGGAACGCCCATCATC-GCCTCGACCCAACGGAATGCCCAAAACGGCATTCGTTCTC
GTCCCACTGGCTGACGCTGGGCCGGGGCGCTTCCGGGTCCCACATGTCCGCGTCTAAACAGGCCACGGGGG-CCGCAGTT
TGTTGGTTCGTTAGGTGCCGTGCGTGGACTGTGATGCTGACCGGGCCCCAACTGGGGATCGAAGGAGCGGGGCCCGCGCG
AGCCACTGGGCCGTGGGGCATATATATGCCCTTTTCCCGCCGGCGAATCCCATTCCTTCTCCTCT--CGTCTCCAGCTCC
TCCTCCTTCC-T------CGCGCGCGCTCCTCTGCTCTGTTCTCCTCTCCTTGTGCGCTAGTGTTCACCAAGATCAGGCA
AACGGCCACGCGCGAGCTCGCCATGGAGCGTACCGGCGGCAAGGGCGACGACGACTCGCGGCTGATGCGCGACCTCTGCA
CGCTGCTCGTCACCATCATCGCCCCCGTCGCGGCGGCGTCCTCGACGAACTCGCCCCGGAGGCCCGTGGCGCGGCGCCCG
CGGGGCGGCATGTCGCCGGCGGGCGCGGCGTCGATGCTTCTGGGCGCGTCGATGGCGCTGATGCTGTGCGGGTCCGTGAC
GTTCGCCATCGGCTTCCTCCTCATGCCGTGGGTCGCCGGCGTCGCGCTGCTCTTCGGCTTCGCCGGCGTCATCTCCACCC
TCTCCTCCGGCCTCCTCCCCTCGTCCTCCTCC---------------AAGGAGCAACGGCTGCGGACGCCGACGCAAGGG
CGTGTCCGTGCCTCTGCC---CCGATGAGCTCTGTCCCGGATAAGCTCGTGGCGTGGCGTTGAGCTGTTCTTGAAATTTA
GTTAATTAATTA--AATTAGGGCGGGATTAGGATGGGTAATTCCTGTGTAAAAAA-GCTTCCCTTTTGCTGTTGTTGTAC
GTTTCCAGTCGCAAGAGATGCCGATGATTTA---CTACCGGCAGAAGCAACATTTGTTATATGTGTTGATTGTTTCGTGT
CGAGAATTCTGTGCACGGATGGCAAACGTGCTTCGCTACTCTGCTTCGTCAGACCAGAAAACTGAGACGTCTCTCCGGTG
CACGTATATATCTCTCAATCTCTGTCCGCGTCGATCTCGTAATTTCTGCAGTGTGTACTACTTTGCCACGGCAACTTT-T
GTGTTTTGTCGTGGTGAGACGTGAG-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--
>chr4D_1893
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------TGGCGAGCCGTAACGCCAACTCCACCGCGCGATCCG-TCCTGTCCGCGCGTGTCCGTTTGAGATAAAAC
GGACGAACCTGACGGCCCAACGCGGAGGCGTAAACGGACTTTTGTCCGTTTTCTGTCCGCTTTCGATCCATCCTCGGCTC
AAGTTTGCGCCGCTA-TGGGGTGAAACAGACAGCACGCGGACGCGTGCGCCGTCTGCACGTGTCCTCCCCTGGCCCGCCC
GTCGGTGGCACAATG-GCGTCTTTTTCTATCCG-CCCCCTCCCTCCCTCCGGCCGCACGCC-CTTCATTCTTCTCCACTC
TTCCCCACTCTTCCCTCGCC---ACCGCCGCCGTCGCTGCCATTGTAGCTGTGCAGCTCGGACGCGCGCTTGCCCAGCCC
CTTTCCC-TCGGCGCCCCCGAGCTACCCAA-CCACGGGCACTTGATTTGCGCACCCGCCGGCCGGATTTGGGGGGGATCC
GGTCGGTCTTGAGCTCGCCCGGCTGTGGGAGGCCGCGCCGCGCCATGGA-----CTGGCA-------GGGCCGCAAGGCC
ACATGCAGGCAGTGGCTCCTCCTCTAGCCGTTCGGATCTACACCGTCGGTGGTCCGCCGGCAGATACACGAATGGCGGTC
GGCCGGGCTCGGTGCTAGCCCAAAAGCTCGCCAGCGCACCGTTGCCGCTCATTAAGTGCAACCACTGCCCAAAGAAGGTC
GTGTGCCGCATGTCTACAATGCCGGAACATCCCGGATGGGTGTTCATCAAGTGCTTAAACGATGAGGTATGTGCTCTTTT
TA
>chr4A_1902
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------GTGAGGTCAATTCCACCGCGTCACCTTATCCTGTCCGCGCGTGTCCGTTCGGGGTAAAAC
GAACGAATCAGACGACCCAGAGCGCGGGCGCAAATAGATTTTTGTTCGTTTTCTATCCGCTTTCGATCCATCCCCATCCC
AAGTTTGCGCCGTTTTTGGGGTGAAACGGACAGCACGCGGACGCGCGGGCCGTCTGTGCGTGTCCTCCCCTGGCCCGCCC
GTCGGTGGCATAGAG-ACGCCTTTTTCTATCCGCCCCCCTCCCTCCTTCCAGCCGCACCCC-CTCCACTCTTCTCCACTT
TTCCCAATTCTTCCCC-----TCGCCGCCGCCGCCGCTGCCATTGCAGCTGTGCAGCTTGGACACGCGCTCGCCCAGTCA
CTTTCCC-TCGGCGCCCCCGAGCTACCCAA-CCACGGCCACCTGATTTGCGCACCCGTCGGCCGGATTTGGGACGGATCC
GATCGGTCTTGAGCTCGCTCGGCTGTGGGAGACCGCGCCGCGCCATGGA-----CTGACCGA-------GCCGCAAGGCC
ACATGCAGGCAGTGGCTCCTTCTCTAGCCGCCCGGATCTACACCGCCGGTGGTCCGCCGACAGATATATGAATGGCGGTC
GGCCGGGCTCGGTGCTAGCCCAAAAACTCGTCGGCGCACTGTTGCCACTCATTAAGTGTGACCACTGCCCAAAGAAGGTC
GTGCGCCGCGTGTCTACAACGCCGAAACATCCCGGATGGGTGTTCATCAAGTGCTTAAACGATGGGGTATGTGCTCTTTT
TA
>chr1A_1903
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------TGAGGCCAACTCCATCGCGCGACCCAATTCTATCCGCGCGTGTTCGTTTGGAGTAAAAC
AGACGAACCAGACGGCTCGGCGCACGGGCGTAAATAGACTTTTCTTTGTTTTGTGTCTGCTTTTGACTCATCT-CGGCCC
AAGTTTGCGTCGCTTTTGGGGTGAAACGGACAGCACGCGGACGCACGGGCTGTCTGCGCGTGTCCTCCCCTGACCCGCCC
GTCGGTGGCACAGGA-GTGTCTTTTTCTATCCA-CCCCCTCCCTTCCTCCCGCCGCACGCC-CTCCATTCTTCTCCACTC
TTCCCCACTCTCCCCTCGCCGCCGCCGCCGCCGCTGCTGCCATTGTAGCTGTGCAGCTCGGACGCGCGCTCGCCCAGCCC
CTTTCCC-TCGGCGCCATCGAGCTACCCAA-CCACGGACACCTGTATTGCGCACCCGCCGGCCGAATTTGGGGCGGATCT
GGTCGGTCTTGAGCTCGCCCGGCTGTGGGAGGCCGCGCCACGCCATGGA-----CTGGCCGGGCACCGGGCCGGTAGGCC
ATATGCAGGCAGTGGCTCCTCCTCTAACCGCTCGGATCTACACCGTTGGTGGTCCGCCGGCAGATACACGAATGGCGGTC
GGCCGGGCTCGGTGCTAGCCCAAAAACTCGTCGGCGCACCGTTGCCGCTCATTAAGTGCGACCATTGCCTAAAGAAGGTC
GTGCACCGTATGTCTACAACGCCGGAACATCCCGGATGGGTGTTCATCAAGTGCTTAAACGATGGGGTATGTGCTTTTTT
T-
>chr3A_1905
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------AGGCCAACTCCACCGCGCGACCCTATCCTGTCCGCCCCCGTCTGTTTGGGGTAAAAT
AGACAAACGAGGCGGTCCAGCGCGTGGAAGCAAACGGACTTTTGTCCGTTTTGTGTTCGTTTTTGACCCATCTGCGGCCA
AAGTTTGTGCCGCTTTTGAGGTGAAACGGACACCACGCGGACGCGCGGGCCGTCTGCGCGTGTCCTCCCCTGGCCCGCCC
GTCGGTGGCACAGGGCGGGCCTTTTTCTATCCG-CCCCCTCCCTCCCTCCGGCCGCACCCCCCTCCACTCTTCCCCACTC
CTCCCCTTGCT---------GTCGCCGCCGTCGTCGCTGCCATTGCAGCCGTGCAGTTCGGACGCGCGCTCGCCCAGCCC
CTTCCCC-TCGGCGCCGCCGAGCTACCCAA-CCAAGGCCACCTGGTTTGCGCACGTGCCGACTAGATTTGGGGCGGATCC
GGTCGATCTTGAGCTCGCCCGGCTGTGGGAGGCCGGGCCGCGCCATGGA-----CTGGCT-------GGGCCGCAAGGCC
ACATGCAGGCAGTGGCTCCTCCTCTAGCCGCTCGGATCTGCACCGTCGGTGGTCCGCCGGCAGATACACGAATGACGGTC
GGCCGGGCTCGGTGCTTGCCCAAAAGCTTACCGGCGCAGTGTTGCCACTCATTAAGTGCGACCACTGCCCAAGGATGGTC
GTGCGCCGCGTGTCTACAACGCCGGAACATCCCGGATGTGTGTTCATCAAATGCTTAAACGATGTGGTATGTGCTCTTTT
TA
>chr2D_1905
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------AGGCCAACTCCACCGCGCGACCCTATTCTGTTCGCCCCCGTCCGTTTGGGGTAAAAC
GGACAAATGAGGCGGCCCAGCGCGTGGGAGCAAACGGACTTTTGTCCGTTTTGTGTCTGCTTTCGACCCATCCGCGGCCC
AAGTTTGCGCCGCTTTTGGGGTGAAACGGACACCACGCGGACGCGCGGGCCGTCTGCGCGTGTCCTCCCCTGGCCCGCCC
GTCGGTGGCACAGGGCGGGCCTTTTTCTATCCG-CCCCCTTCCTCCCTCCGGCCGCACCCCCCTCCACTCTTCACCACTC
TTCCCCTCGCT---------GCCACCGCCG---CCGCTGCCATTGCAGCCGTGCAGTTCGGATGCGCGCTCGCCCAGCCC
CTTCCCC-TCGGCGCCGCCGAGCTACCCAA-CCACGGCCACCTGGTTTGCGCACCCGCCGGCCGGATTTGGGGTGGATCC
GATCGGTCTTGAGCTCGTCCGGCTGTGGGAGGCCGGGCACCTCGCCGGAAGGCGCTGGCA-------AGGCCGCAAGACC
ACATGCAGGTAGTGGCTCCTCCTCTAGCCGCTCGGATCTGCACCGTCGGTGGTCCGCCGGCAGATACACGAATGGCGATC
GGCCGGGCTCGGTGCTTGCCCAAAAGCTCGCCGGCGCACCGTTGCCACTCATTAAGTGCGACCACTGCCCAAGGATGGTC
GTGCGCCGCATGTCTACAACGCCGGGACATCCCGGATGGGTGTTCATCAAGTGCTTAAACGATGGGGTATGTGCTCTTTT
TA
>chr6A_1905
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------AGGCCAACTCCACCGCGCGACCCTATCCTGTCCGGCCCCGTCCGTTTGAGGTAAAAC
GAACAAACGAGGCGGTCCAACGCGCGGGAGCAAACGGACTTTTGTCCGTTTTGTGTCCGCTTTCGACCCATCCGCGGCCC
AAGTTTGCGCCGCTTTTGGGGTGAAACGGACACCACGCGGACGCGCGGGTCGTCTGCACGTGTCCTCCCCTGGCCCGCCC
GTCGGTGGCACAGGGCGAGCCTTTTTCTATCTG-CCCCCTTCCTTTCTCCGGCCGCACCCC-TTCCACTCTTCCCCACTC
TTCCCCTCGCT---------GCCGCCGCCG---CCGCTGACATTGCAGCCGTGCAGTTCGGACGCGAGCTCACCCAGCCC
CTTTCCC-TCGGCGCCGCCGAGCTACC-AA-CCATGGCCACCTGGTGTGCGCACCTGCCCGCCGGATTTGGGGCGGATCC
GGTCGGTCTTGAGCTCGGCCGGCTGTGGGAGGCCGGGCCGCGCCATGGA-----CTGGCC-------GGGCCGCAAGGCC
ACATGCAGGCAGTGGCTCCTCCTCTAGCCACTTGGATTTGCACCGTCGGTGGTCCGCCGGCAGATACACGAATGGCGGTC
GGCCGGGCTCGGTGCTTGCCAAAAAGCTCGCCGGCGCACCGTTGCCATTCATTAAGTGCGACCACTGCCCAAGGATGGTC
GTGTGCCGCATGTCT-CAACGCCGGAACATCCCGGATGGGTGTTCATCAAGTGCTTAAACGACGGGGTATGCACTTTTTT
TA
>chr4A_1905
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------AGGCCAACTCCACCGCGCGACCCTATCCTGTCCGGCCCCGTCCGTTTGGGGTAAAAG
GGACAAAAGAGGCGGCCGAGCACGTGGGAGCAAACGGACTTTTATCTGTTTTGTGTCCGCTTTCGACCCATCCACGGCCC
AAGTTTGCGCCGTTTTTGGGGTGAAACGGACATCACGCGGACGCCCTGGTCGTCTGCGCGTGTCCTCCCCTAGCTCGTCC
GTCGATGGCACAAGGCGGGCCTTTTTCTATCCG-CTT-CTCCCTCCCTCCGGCCGCACCCC-CTCCACTCTTCCCCACTC
TTTCCCTCGCT---------GCCGCTGCCG---CCGCTGCCATTGCAGCCGTGCAGTTCTGACGCGACCTCGCCCAACCC
CTTCCCC-TCGGCGCCGCCGAGCTACCCAA-CCACGGCCACCTGGTTTGCGCACCCGCCGGCCGGTTTTGGGGCGGATCC
GATCGGTCTTGAGTTCGGCCGGCTGTGGGAGGCCGGGCCGCGCCATGGA-----CTGGCA-------GGGCCGCAAGGCC
ACATGCAGGCAGTGGCTCCTTCTCTAGCCGCTCGGATCTGCATCGTCGGTGGTCCGCTGGCAGATACACGAATGGCGGTC
GGCTGGGCTCGGTGCTTGCCCAAAAGC-CGCCGGCGCACCGTTGCCACTCATTAAGTGCGACCATTGCCCAAGGATGGTC
GTGCGCCGCGTGTCTACAACGCCGGAACATCCCAGATGGGTGTTCATCAAGTGCTTAAACGATGGTGTA-----------
--
>chr4D_1905
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------AGGCCAACTCCACCGCGCGACTCCATCCCGTCCGCCCCTGTCCGTTTGGGGTAAAAC
TGACAAACCAAACGGCCCAGCTCGCGGGCGCAAACGGACTTCTGTCCGTTTTCTGTCCGTTTTCGACCCATCCCCGGCCC
AAGTTTGCGCCGCTTTTGGGGTGAAACGGACAGCACGCGGACGCGCGGGCCGTCTGCGCATGTCCTCCCTTGGCCCGCCC
GTCAATGGCACAGGG-ACGCCTTTTTCTATCCGGCCCCCTCCCTCCCTCCGACCGCACGCC-CTCCATTCTTCTCCACTC
TTCCCCACTCTTCCCTCGCCGCTGCCGCCGCCACT---GCCATTCTAGCTGTGCAGCTCGGACACACGCTCGCCCAGCCC
CTTCCCCCTCGGCGCCCGCAAGCTACCCAA-CCACGGCCACCTGATTTGCGCACCCGCCGACCGGATTTGGGGCGGATCC
GGTCGGTCTTGAGCTCGCCCGACTGTGGGAGGCCGCGCCGCGCCATGGA-----CTGGCCGGGCACCGGGCCGGAAGGCC
ACATGCAGGCAGTGGCTCCTCCTCTAGCCGCTCGGATCTACACCGTCGGTGGTCCGCCGGCAGATACACGAATGGCGGGC
GGCCGGGCTCGGTGCTAGCCCAAAAGCTCGTCGGCACACCGTTGCCTCTCATTAAGTGTGACCACTGCCCAAAGAAGGTT
GTGCGCCGCGTGTCTACAATGCCGGAACATCCCGGATGGGTGTTCATCAAGTGCTTAAACGATGGGGTATGTGCTCTTTT
TA
>chr2B_1984
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------GCGGGAGCAAACGGATTTTTGTCCGTTTTGTGTCCGCTTTCGACCCATCCGCGGCCC
AAGTTTGCGTCGCTTTTGGGGTGAAACGGACACCACGCGGACGCGCCGGCCGTCTGCGCGTGTCCTCCCCTGGCTCGCCC
GTCGGTGGCACAGGACGGGCCTTTTTCTATCCG-CCTCCTCCCTCCCTCCGGCCGCACCCCACTCCACTCTTCTCCACTC
TTCCCCACTCTTCCCC-----TTGTCGCTG---CCGTTGCCACTGCAGCCGTGCAGCTCGGGCGCGCACTCGCCCAGCCC
CTTCCCC-TTGGCGCCGCCGAGCTACTCAA-TCACGGCCACCTGGTTTGCGCACCCGCCGAGCGGATTTGGGACGGATCC
GGTCGGTCTTGAGCTCGCCCGGTTGTGGGAGGCCGGGCCGCGCCATGGA-----CTGGCCGGGC-------CGCAAGGTT
ACATGCAGGGAGTGGCTCGTCCTCTAGCCGCTCGGATCTGCACCGTCGGTGGTCCGCCGGCAGATACACGAATGGCGGCC
GGCCGGGCTCGGTGCTAGCCCAAAAGCTCGTCGGCGCATCGTTGCCCCTCATTAAGTGCGACCACTGCCCAAGGATGGTC
GTGCACCGCGTGTCTACAACGCCGGAACATCCCAGATGGATGTTCATCAAGTGCTTAAACGATGGGGTATGTGCTCTTTT
TA
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSS---S--S-------S-----------S----------SSSS--S-S---------
-----S----------------S---------------------------------------------------------
----S--------------S------------------------------------------------------------
--------------------S----------S-----------------S------------------------------
------------------S-------------------------------------------------------------
----SS-SSSS---SS----------------------SS-------------S----S-----------------S---
SS----S-------------------S-------------------S------------------------S---S----
------------------------------------------------S--SS---------------------------
-----------------------------------------------------------SS---SSS-------------
------------SSSSSS---------------S---S-S-----S-----------------------S----------
-------------S-----------------------------------S------------------------------
--------------------------------------------SS----------------------------------
--------------S------S----------------------------------------------------------
------------S-------------------------------------------------------------------
----------------------------SS-S------SSSSSSSSS-------S--------S--S-------------
---------------------------------------------------------------S----------------
--------S----S-----------------------------------------S------------------------
-------------------------------------------------------S------------------------
---------S-----------------------------S----------------------------------------
--------S-----S-----------------------------------------------------------------
-------------------------------------------S-S------------S-----------S-S------S
---------S---S--------S------------------------------------------------------S--
-------------------------------S---------S-------------------------------------S
----------------------S----------------------------------------------S-------S--
------S-------------------------------S------------------S----------------------
------------S-----------------S------------------------------S------------------
--------------------S--------------------------------S--------------------------
-------------------------S--------S------------------S--S------------------S----
---------------------------------------------------S---------S------------------
--------------------------------------------------------------------------------
--
>forward_343
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---CGGGAGGAGATCAGAACACG---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--
>reverse_1480
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------CCAAGGATAAGGAGCGACGG---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--
>forward_344
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----GGGAGGAGATCAGAACACGC--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--
>reverse_1800
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------CCTGCTTCGTCAGACCAGAA---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--
