>input_sequence_72358
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------------------------------------------------------------------ATGGGCGACACCGG
CGCGAACATGGGCCACTGGGCGGGCATCTACGGCGTCGGCGGCAATGGGGCCGCGGCGGCGGAGGGCAGCGTGGTGACGG
TGTCGAGCCCGACGTCGGGGGGCTCGGGCGGCGGGAGCCCCACGAGGTCGGCGCCCGGGGTCGAGGGGGGCCGCGTCGGC
AAGCCGGCGCGGCGGAGGTCCCGCGCCTCGCGGCGGGCGCCCGTCACGCTGCTCAACACCGACACCACCAACTTCCGCGC
CATGGTGCAGCAGTTCACCGGCATCCCCTCCGGCCCCTACGGCCCGGCCGGCGCGGGCGGCGGGCCCGTGATCAGCTTCG
GCGCGGGCGGTGGCGACTACGGCCTCGGCGGCGGCATGCCGGTGCGCCCGTCGCCGAGCTCGGCCGTGATGTCGTTCGAC
CACCTCGGCCACCACCGCCCGTCCGCCGCCACGTCGTCCCTGCAGCAGCAGCAGCATCAGCAGAGCCAGCTGTTCCGGCC
---GCAGCAGCAGCAACAGTACGCCGACTACGGCG---------------GCGGCGGCGCGGACATGTCGTTCCTGCACG
GGTTCGAGTCGTCGGCGGAGGACAGACTGCTGCTGCAGAGCATACAGGCGGCGCAGATGCTGCCCCGGCCGGCCTCCACT
AACACCCCCAATGGCTACAACTTCGGATGA--------------------------------------------------
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>chr6A_1_TraesCS6A01G156200
ACATTCCTTGTCGTCCAAGTGGGATCCGATCAAAGGTGCACGTGCGTGCCGATGAACGCCACAGCGCGCGCGCGCGCACA
CACACCCACAGTGGTGCTAGCTAGCCTCAGCTTCAGCGCACGTCCCGCCATGCACGTCGCCGTCCGTCGGCTTTGGCCTT
TAGTTGGTCGAAGCTTCGCGGCTAGCTGCACCGGTCGACCGCCCTCGCTTTGCCTGCGTGCCACGATATTCC-----CTC
GTCTCTTCTTCCTTCGCACCCCGGCCAGGCCGGTTCACACACGTAAAAA-----AAGATGAAAAGAACGCATGTTGTGTA
AAGCGCGGACATCCCATCGACGGAGCGTGAAAAGCGACCACTGTTTGCCGGCTAAATCTTTGCGTCCCGCGGATCTCGTT
CACAAGAGACAGAGATCGTCCACGCGCGTGCTCGATTCGGCACGCTCGGCCCAAGTGGACGTGCACTACACACGGCGGCG
CCGCGCGTGTTTGCAGTGCACCGGCTGATCGGCGGTCGTGGAACCCTAGCTTGCTCG---CGCCCGCGGCGAGCCCGAC-
-------CGTGGCAGGCCACCGGC-GCGCCACCAACAGCGACGCCACTCCGTAACGTAAGCCGGCGCAGGCGACCCGATT
CAAACATCCTTTTTTTCCTTTTAGAGAGAGAGAGAGAGGAGGGGAGGGAGGTAGGAATCGGCTCAGCTGCCTCGAGTTAA
CGGCGCCATCGCCGGGGGCTCGCTGGTGCGGGCG----GGCGGGCCCCGCGCCAACGACCCGTTCGCCAGTGGGCCGCCA
CCTCGGGCGCGACGCTTCGCGCAAACTGCGCGGGTCAGCCACGTTCCAGAAGGCGACCCCACACCCACCCTGACCGTCCG
ATCACCCGTCCTCTCCATCCAACGGTGGGCTGTCTCCCCGAGCACCCCCTTTGACTCGTCGCGGGTCTCCTATAAGTAGC
CGCCTTCCCCGTCCGGCTCGAGAACTCTACTCCCCCTTCCTACTGCGGTCAGTGCTACTGCGTGCCATGGGCGACACCGG
CGCGAACATGGGCCACTGGGCGGGCATCTACGGCGTCGGCGGCAATGGGGCCGCGGCGGCGGAGGGCAGCGTGGTGACGG
TGTCGAGCCCGACGTCGGGGGGCTCGGGCGGCGGGAGCCCCACGAGGTCGGCGCCCGGGGTCGAGGGGGGCCGCGTCGGC
AAGCCGGCGCGGCGGAGGTCCCGCGCCTCGCGGCGGGCGCCCGTCACGCTGCTCAACACCGACACCACCAACTTCCGCGC
CATGGTGCAGCAGTTCACCGGCATCCCCTCCGGCCCCTACGGCCCGGCCGGCGCGGGCGGCGGGCCCGTGATCAGCTTCG
GCGCGGGCGGTGGCGACTACGGCCTCGGCGGCGGCATGCCGGTGCGCCCGTCGCCGAGCTCGGCCGTGATGTCGTTCGAC
CACCTCGGCCACCACCGCCCGTCCGCCGCCACGTCGTCCCTGCAGCAGCAGCAGCATCAGCAGAGCCAGCTGTTCCGGCC
---GCAGCAGCAGCAACAGTACGCCGACTACGGCG---------------GCGGCGGCGCGGACATGTCGTTCCTGCACG
GGTTCGAGTCGTCGGCGGAGGACAGACTGCTGCTGCAGAGCATACAGGCGGCGCAGATGCTGCCCCGGCCGGCCTCCACT
AACACCCCCAATGGCTACAACTTCGGATGATCCCCTCACCACTCCACCCCTATACCCCGTTGATCAATCAAGGTACACTT
AATCAGAGAGCCAGCGAGAACAGCAAGCT-----------------TTGCTTTCTCCGCTCTGCGAAGACGACGACGTTG
TTGCTGTTCCAAAGGTTAATTTTTGCTGGCCTTGCCGTAGAGAGGGCGTGCGATGAAGCA------AAGGCCAGCTGATT
AAGAGAGTAATTAGTAGTTGTAATAGTAGCCACGCCACACCACTTTACAGGTTCAGCTACAGTTGATTAGGTGCATGTGA
AACGGAAGGCATGTAAATAGTTTCAGCTTTCGGTGCGTAGTGTAGTGCAGCGGCAACGAGTTGATAGCGAGGAATCTTCT
CCTCCTCCTAGATTGGACGCCTCG-----CCTTAGCTTGTCTCGGAAGCAAAGTTGGGGACTGCAACCACCACCATGCAT
GCATCTACTGTACTATAGTACTACTACCA------CTGGTCAAGTCGCCGCTCCTAATTGATCACATGTTGTTTTCTCAA
ATAAATGTGTCTCTTTCTTTAGCCACGCCCGCCGCCTGTAATTTGTTCATCTTTTAAAAGATAAGGTATCAGCTCCTTAA
TTTGTTCTCTGACTAACATGTTCGAGTGCACATGTACCGTGTTCCTTACCGTGATTAATTAACTGGTGACTGCATTCTGG
AAAAAAAACCTCAAAAAATAAATTCGGGAAAAAAAAA-TCTGATGACTGACCTACGGGCTATCGATCTCAGCCGTTGA-G
GCGTGTATAGAATGTAGATATGTGGGGCCCACGAGGAGCTCGATTGACACATGTGCCATGACGACCCGCTGACGTACGGC
AGGTCAAAGTCACAACTGTCGTCTAAACCGAGACTGGGAAAAGTCCAACCCAACTCGAGTTAGCTTAGTTAATCAGC---
--TAAACTAACCATGCTTAATGTTTTGCCTCCTTGCACACGCAAGTCTTTCAGTGTGGTCAAGCTTTCACGCGTAGAGGG
GTGGATCGGTAAATGCATGTGTGGTATCGTT
>chr6D_1
ACATTCGTCGTCGTCCAAGTGGGATCCGATCAAAGGGGCA----CGTGCCGACGAACGTCACAGCGCGCGCGC-------
---A--CACAGTGGTGCT----------AGCTTCAGCGCACGTCCCGCCATGCACGTCGCCGTCCGTCGGCTTTGGCCTT
TAGCTGGTGGAAGCTTCGCGGCGGCC----CCGGTCGACCGTTCTCGCTTTGCCTGCGTGCCACGATATTCCCTCGTCTA
CTCTCTTCTTCCTTCGCCCCCC-----GGCCGGTTCACACACGTAAAAAAAGAGAAGATGAAAAGAACGCATGTTGTGTA
AAGCGCGGACAGCCCATCGACGGAGCGTGAAAAGCGACCACTGTTTGCCGGCTAAATCTTTGCGTCTCCCGGATCTCGTT
CACAAGAGACAGAGGTCGTCCACGCGCGTGCTCGATTTGGCACGCCA----CAAGTGGACGTGCGCTTCGCACGGAGGCG
CCGCGCGTGCTTGCAGTGCACCGGCTGACCGGCGGCCATGAAGCGTTAGCTT-------------GCGGCGAGCCCGACA
GGACGGTCGTGCTTCCGGCG-GCCGGCGCCACCAACAGCGACGCCACTCCGTCACGCAAGCCGGCGCAGGCGACCCAATT
CAAACAT-CTTTTTTTCCTTTTAGAGAGAGAGAGAGAGAGTAG--GGGAGGTAGGAATCGGCTCAGCTGCCTCGAGTTAA
CGGCGCCATCGCCGGGGGCTCGCTGGTGCGGGCA----GGCGGGCCCCGCGCCAACGACCCGTTCGCTAGTGGGCCGCCA
CCTCGGGCGCGACGCTTCGCGGAACCCGCGCGGGTCAGCCACGTTCCAGAAGGCGACCCCACGCCCGCGCCCG-CGTCCG
ATCACCCGTCCTCTCCATCCAACGGTGGGCTGTCTCCCCGAGCACCCCCTTTGACTCGTCGCGGGTCTCCTATAAGTAGA
CGCCTTCCCCGTCCGCCTCGAGAACTCTACTCCTCCCTCCTACTGCGGTCAGTGCTACTGCGTGCCATGGGCGACACCGG
CGCGAACATGGGCCACTGGGCGGGCATCTACGGCGTCGGCGGCAATGGGGCCGCGGCGGCGGAGGGCAGCGTGGTGACGG
TGTCGAGCCCGACGTCCGGGGGCTCAGGCGGCGGGAGCCCCATGAGGTCGGCGCCCGGGGTCGAGGGGGGCCGCGTCGGC
AAGCCGGCGCGGCGAAGGTCCCGCGCCTCGCGCCGGGCGCCCGTCACGCTGCTCAACACCGACACCACCAACTTTCGCGC
CATGGTGCAGCAGTTCACCGGCATCCCCTCCGGCCCCTACGGCCCGGCCGGCGCGGGCGGCGGGCCCGTGATCAGCTTCG
GCGCGGGCGGCGGCGACTACGGCCTCGGCGGCGGCATGCCGGTGCGCCCGTCGCCGACCTCGGCCGTGATGTCGTTCGAC
CACCTCGGCCACCACCGCCCGTCCGCCGCCACGTCGTCCCTGCAGCAGCAGCAGCAG------AGCCAGCTCTTCCGGCC
---GCAGCAGCAGCAGCAGTACGGCGACTACGGCGGCATGCACGCCGGGGGCGGCGGCGCGGACATGTCGTTCCTGCACG
GGTTCGAGTCGTCGGCGGAGGACAGGCTGCTGCTGCAGAGCATACAGGCGGCGCAGATGCTGCCCCGGCCGGCCTCCACT
AACACCCCCAATGGCTACAACTTCGGATGATCACATCACCACTCCACCCC-ATACCCCGTTGATCAATTAAGGTACACTT
AATCAGAGAGCTAGAGAGAACAGCAAGCT-----------------TAGCTTTCTCCGCTCTGGGAAGACGACGATTGCT
GTTTCG-----AAGGTTAATTTTTGCTGGCCTTGCTGTAGAGAGGGA-TGGGATGAAGCA------AAGGCTAGCTGATT
AAGACAGTAATAACTAGTTGTAATAGTAGCCACCACA---CACTTTACAGGTTCAGCTACAGTTGATTAGGTGCATGTGA
AACGGAAGGCATGTAAATAGTTTTAGCTTTCGGTGTGTCGTGTAGTGCAGCGGCAACAACTTGATAGCGAGGAATCTTCT
CCTCCTTCTAGATTGGA-----CG-----CCTTAGCTTGTCTCGGAAGCAAAGTTGGGAACTGCAACCACCACCATGCAT
GCATCTACTGTACTATAGTACC------ACCACTGCTGGTCAAGTCGCCGCTCCTAATTGATCACATGTTGTTTTCTCAA
ATAAATGTGTCTCTTTCTTTAGCCGTGCCTGCCGCCTGTAAC-TGTTCATCTTTTAAAAGATAAGATATCAGCTCCTTAA
TTTGTTCTCTGACTAACATATTCGAGTGCCCATGTACCGTGTTCCTTACCGTGATTAATTAACTGATGACTACATTCTGT
GA----------------------------AAAAAAAAACTGATGACTGACCTGCGGGCTATCGATCTCAGCCGTTGA-G
CC-TGTACAGAATGTAGATATGTGGGGTCCACTGGGAGCTCGATTGACACATGTGCCATGACGACCCGCTGACG----GC
AGGTCAAAGTCACAACCGTCGTCTAAACCGACACTGGGAAAAGTCCAACCCAACTCGAGTTAGCTTAGTTAATCAGCTAA
AATAAATTAACCATGCTTAATGTTTTGCCTCCTTGCACACGCAAGTCTTTCAGTGGGGTCAAGCTTTCACGCGTAGAGGG
GTGGATCGGTAAATGCATGTGTGATATCGTT
>chr6B_1
ACATCCCTCATCGTCCAAGTGGGATCCGATCAAAGGGGCA----CGTGCCGACGAACGCCACAGCGCGCGCGC-------
---ACCCACAGTGGTGCTAGCTTGCTTCAGCTTCAGCGCACGTCCCGCCATGCACGTCGCCGTCCGTCGGCTTTGGCCTT
TAGCTGGTGGAAGCTTCGCGGCGGCC----CCGGTCGACCGTTCTCGCTTTGCCTGCGTGCCACGATATTCCCTCGTCTC
TTCTCTTCTTCCTTCGCCCCCC-----GGCCGGTTCACACACGTAAAAA-----AAGATGAAAAGAACGCATGTTGTGTA
AAGCGCGGACAGCCCATCGACGGAGCGTGAAAAGCGACCACTGTTTGCCGGCTAAACCCTTGCGCCCCGCGGATCTCGTT
CACAAGAGACAGAGATCGTCCACGCGCGTGCTCGATTCGGCACGCCCGGCCCAAGTGGACGTGCACCACACACGGCGGCG
CCGCGCGTGCTTGCGGTGCACCGGT--------GGTCGCGAACCGCCAGCTTGCTCGCGCCGCCCGCGGTGAGCCCGAC-
-------CGTGCTTCCGGCG-GGC-GCGCCACCAACAGCGACGCCACTCCGTAACGCAAGCCGGCGCAGGCGACCCAATT
CAAACAT-CTTTTTTTCCTTTTAGAGA--GAGAGAGAGAGTAG--GGGAGGTAGGAATCGGCTCAGCTGCCTCGAGTTAA
CGGCGCCATCGCCGGGGGCTCGCTGGTGCGGGCGGGCGGGCGGGCCCCGCGCCAACGACCCGTTCGCTACTGGGCCGCCA
CCTCGGGCGCGACGCTTCGCGGAAACCGCGCGGGTCAGCCACGTTCCAGAAGGCGACCCCACACCCGCGCCAGCCGTCGG
TTCGCCCATCCTCTCCATCCAACGGTGAGTTGTCTCCCTGAGCACCCCCTTTGACTCGTCGCGGGTCTCCTATAAGTAGA
CGCCTTCCCCGTTCGGCTCGAGAACTCTACTCCTCCCTCCTACTGCGGTCAGTGCTACTGCATGCCATGGGTGACACCGG
CGCGAACATGGGCCACTGGGCGGGCATCTACGGCGTCGGCGGCAATGGGGCCGCGACGGCCGAGGGCAGCGTGGTGACGG
TGTCTAGCCCGACGTCCGGGGGCTCGGGCGGCGGGAGCCCCACGAGGTCGGCGCCCGGGGTCGAGGGAGGCCGCGTCGGC
AAGCCGGCGCGGCGGAGGTCCCGCGCGTCGCGCCGGGCGCCCGTCACGCTGCTCAACACCGACACCACCAACTTCCGCGC
CATGGTGCAGCAGTTCACCGGCATCCCCTCCGGCCCCTACGGCCCGGCTGGCGCGGGCGGCGGGCCCGTGATCAGCTTCG
GCGCGGGCGGCGGCGACTACGGCCTCGGCGGTGGCATGCCGGTGCGCCCGTCGCCGAGCTCGGCCGTGATGTCGTTCGAC
CACCTCGGCCACCACCGCCCGTCCGCTGTCACCTCGTCCCTGCAGCAGCAGCAGCAGCAGCAGAGCCGGCTGTTCCGGCC
GCAGCAGCAGCAGCAGCAGTACGGCGACTACGGCGGCATGCACGGA---GGCGGCGGCGCGGACATGTCGTTCCTGCACG
GGTTCGAGTCGTCGGCCGAGGACAGGCTGCTGCTGCAGAGCATCCAGGCGGCGCAGATGCTGCCCCGCCCGGCCTCCACT
AACACCCCCAATGGCTACAACTTCGGATGATCACATCACCACTCCACCCCTATACCCCGTTGATCAATTAAGGTACACTT
AATCAGAGAGCCAGCGAGAGCAGCAAGCTATCATCAATCCACAGCTTTGCTTTCTCCGCTCTGGGAAGACGACGGTTGCT
GTTTCG-----AAGGTTAATTTTTGCTGGCCTTGCTGTAGAGAGGGA-TGGGCTGAACTCTGAAGCAAGGGTAGCTGATT
AAGACAGTAATTAGTTGTAGTAATAGTAGCCACACCACACTACTTTACAGGTTCAGCTACAGTTGATTAGGTGCATGTGA
AACGGAAGGCATGTAAATAGTTTTAGCTTTCGGTGTGTATTGTAGTGCAGCGGCAACAGCTTGATAGCGAGGAATCTTCT
CCTCCTTCTAGATTGGA-----CGCCTTGCCTTAGCTTGTCTCGGAAGCAAAGTTGGGGACTGCAACCACCACCATGCAT
GCATCTACTGTACTATAGTACTACTACTACCACTGCTGGTCAAGTCGCCGCTCCTAATTGATCACATGTTGTTTTCTCAA
ATAAATGTGTCTCTTTCTTTAGCCGTGCCTGCCGCCTGTAAC-TGTTCATCTTTTAAAAGATAAGATATCAGCTCCTTAA
TTTGTTCCCTGACGAACATATTCGAGTGCACATGTACCGTG----------------ATTAACTGATGACTACATTTTGT
GG----------------------------AAAAAAA-ACTGACGACTGACCTACGGGCTATCGATCTCAGCCGTTGAGG
CC-TGTACAGAATGTATATATGTGGGCCC-ACGAGGAGCTCGATTGACACATGTGCCATGACGACCCGCTGACG----GC
AGGTCAAAGTCGCAACTGTTGTCTAAACCGAGACTGGGAAAAGTCTAACCCAACTCGGGTTAGCTTAGTTAATCAGCTAA
AATAAATTAACCATGCTTAATGTTTTGCCTCCTTGCACACGCAAGTCTTTCAGTGGGGTCGAGCTTTCACGCGTAGAGGG
GTGGATCGGTAAATGCATGTGTGATATCGTT
>SNPs
--------S---------------------------S---SSSS--------S--------------------SSSSSSS
SSS-------------------S--S------------------------------------------------------
---S----S-------------SSS-SSSS-----------SS-------------------------------------
S----------------S----SSSSS-----------------------------------------------------
-----------S--------------------------------------------------------------------
---------------------------------------------S----------------------------------
---------S------------------S-----------S-S-S-----------------------------------
-----------SSSSSSSSSS-----------------------------------S-------------------S---
-------S------------------------------SSSS-SS-----------------------------------
-------------------------------------------------------------------S------------
---------------------S----S---------------------------------------S-S-SSS-------
-------------------------------------------------------------------------------S
---------------------------------S--S-------------------------------------------
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----------------S---------------------------------------------------------------
--------------------------------S-----------------------------------------------
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----------S---------------------------------------------------------------------
--------------------------------------------------------S-----------------------
---------------S-------S--------------------------------------------------------
-------------------------S------------------------------------------------------
--------------------------------S-S---------------------------------S-----------
---------------------------------------------------------------S-----------SSSSS
S-SSS-SSSSS------------------------S----------SS--S--------------------S--------
----S----------------------------S----------------------------------------------
-----------------------S-----------S---------------------S-S--------------------
------S----------SSSSS----------------------------------------------------------
---------------------------S----------------------------------------------------
------------------------SS---S-----------SS----------------------S--------------
-------------------S---------------------------------------------S-----S-------S
S-SSSSSSSSSSSSSSSSSSSSSSSSSSSS--------S-----------------------------------------
S-S----S------------------------------------------------------------------SSSS--
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------S------------------------------------------------S------------------------
-----------------------S-------
>forward_43
-----------------------ATCCGATCAAAGGTGCACGT-------------------------------------
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>reverse_2100
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-------------------CCTCGCCTTAGCTTGTCTCG-----------------------------------------
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