>input_sequence_72356
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------ATGGTTAAGGTATGTTCAGTTT
GCTTGTCTTGTTCCAGGACTAGCTA-GTGTTGAGTTTGCTCAATTCTGTGCATCGTTCTGAATTTTCTTTTGTAACTGTT
GCAGCAAAAGATTGTCCTCAAGTTGGCTCTGGATGATGAGAGGAAGAGGAGGAAGGCCTTCAAGGCGGCCGTTGGCATG-
--------------------------------------------------------------------------------
---------------------TCAGGCGTGACATCCGCGACGATGGAGGGGGACAAGATCATCATCGTCGGGGACGGCGT
CGACCCGATCACGCTGACCACGATGCTCCGGCGCAGCCTGGGCTACGCAGAGCTCCTCAGCGTGTCGTCCGGCGACGACA
AGAAGAAGGACGGC------------------TACGGCGCCGCCTACGGGTACGGCGGCGGCGAGAAGAAGGACGGCTAC
GCCGCAGCCTACGGGTACGG---------------------------------------------CGGCG----------
--------GCGAGAAGAAGAAGGACGGCTACGGGTACGGCGGCGGCGACGGTGGCGGTAGCGGCATGAGCTTCGGTGGCA
AGGAGGGTGGCGGTTCCAAAGGTGGTGGCAGCGGCGGCGGAGGCGGCGGCTACTCTCAGAACACGGTTGCGCCGATGACG
TACCCCGCGTACCAGCAGTACAACTCCATGCCGTCCTACCCGGTTTACTCCTACC------CTGCTCCGGCTTATCAGCA
GCAAGAACAGGATCCCGGCTGCAGCATTATGTAG----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------
>chr5D_1_TraesCS5D01G176600
GCAATATTTAGTTGAATA-GTGGGCATCTTGTATGCGTTCTTCGAAAGAGCTTCACCCAAACAAACATTTACTTATGCAG
AATTACATAAAGTTTAA--------ACGACAAGCAGAATATGTAGGTCAACGAAAAGACCGTGTAAGTAAGAATGGTCCA
CGTTCAAACGAATCTTGAGTATCTACTTGTAGTATGAAAAGTATGATTTAGGGTCGCGATTGTGCCGAAAGTGAAGCTCA
GGTGCTCCAATTTCTCAAACGTTGCTATTGTTGTGTGCATCATTTCAC-CCGTAAAGAAAAAGGTATTGATAACCGGCCA
TTCGACGTACATTTTTT--CA--CACTTTCTTGAGACGGCGAGAGCAAAAAATTCAGAACCCTCTTTCGACAAAATGACC
TTTACTGGTAGTTTCAGGAATTCAATAACGGCACAAACAAACAAATATATTCTATATTCTATATG---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------TATGATAAGGCAATAAGGGGAC------TAGGGCCCTCTTTCGATAAGTTCAGCTGTCTACACCA
CGAAAACGTGCAATCACAAAAG-------AAAAAAAGAATAACACCACGAAAATGTGAGTGGCAGCCAGCAGAGATGACC
AAGATATCTTCTGTCTGCCTTTCTGAAGGGGGTCACTGATGCCTTGGACCAAATGCGTGGAAACTTCTGCCGCACTAGCA
CCGACCAGAGAATATCAACCACTAATACGATATTGAGCCTGGCCTGTCAA------------TGATTCAGTATAGCGCAT
GCACTGTTTGGTTGGCTGATTGGTTG-TTTGTTCCATTTGGCCACCTTTCTCTCTCTCTCCAGACCCTTCTTTGCGGCTT
CCCTCGTCC--CTCTGCCTCTCTGCCTGCCTATAAAAGACCACAACGTCTTCTCGC---TCATAAGAGGCGGCTCATCTC
TTGCATCTGTCACACTGCACAAAAGCAAAACTGATCTTCTGGAG--TAGCTAGCTACTCTGCTAG----TGTACTGTCAA
AGCTAGCT-GGAGATTC----------------CGTGAGAGTTTGTGCGAGTTGCAAGATGGTTAAGGTATGTTCAGTTT
GCTTGTCTTGTTCCAGGACTAGCTA-GTGTTGAGTTTGCTCAATTCTGTGCATCGTTCTGAATTTTCTTTTGTAACTGTT
GCAGCAAAAGATTGTCCTCAAGTTGGCTCTGGATGATGAGAGGAAGAGGAGGAAGGCCTTCAAGGCGGCCGTTGGCATG-
--------------------------------------------------------------------------------
---------------------TCAGGCGTGACATCCGCGACGATGGAGGGGGACAAGATCATCATCGTCGGGGACGGCGT
CGACCCGATCACGCTGACCACGATGCTCCGGCGCAGCCTGGGCTACGCAGAGCTCCTCAGCGTGTCGTCCGGCGACGACA
AGAAGAAGGACGGC------------------TACGGCGCCGCCTACGGGTACGGCGGCGGCGAGAAGAAGGACGGCTAC
GCCGCAGCCTACGGGTACGG---------------------------------------------CGGCG----------
--------GCGAGAAGAAGAAGGACGGCTACGGGTACGGCGGCGGCGACGGTGGCGGTAGCGGCATGAGCTTCGGTGGCA
AGGAGGGTGGCGGTTCCAAAGGTGGTGGCAGCGGCGGCGGAGGCGGCGGCTACTCTCAGAACACGGTTGCGCCGATGACG
TACCCCGCGTACCAGCAGTACAACTCCATGCCGTCCTACCCGGTTTACTCCTACC------CTGCTCCGGCTTATCAGCA
GCAAGAACAGGATCCCGGCTGCAGCATTATGTAGATGTA-----------GTAGTA-------------TAGTTATTCAT
TAGGGAGAGATGATGCGCCG--GCGAGACCCGGCCGGAGAGTTGCGAGCTGTGTTTAGGCCATGATT--GATGGCCTGA-
CCAGATGTTGGCTCAGAGAGCAGAGAGATGTTGGCTGCCTGAGCACTCAGTGGT---------ACGTATGTACAGTACA-
-------------GGTTGCTTGGATCAGCGATGGTGGCTTGGAGCGTGGTAACAGATTGTACAGGAGGAATGAATAAAAG
GAAACTCGGGTGTCATAAAACAAATAAGCAACAACTCAATAAAATACACCGCCGAACGATACGATGAGGAGACCCACTTC
CAAAACAGATCAAAAAATGAACATGGAACTAGAATAAGCATAACACCCAGCTGAAGCCCGACCAAAGACACCTATGCTTC
ATGACAACGCCCCAAGAAGGTAACGATGCGAAGCGTCGCCGCCGTCGAGTCCAAACAAACGGACTAGAGTTTTCACTTGG
AGCCCTGGCACAACAACAATATCCATGACAACGTCTTTAGGAAGCAAACGACATCCATAGACGCCGCCGGTGCCGGCGCC
AGAAATGCAAAGTTTTCACTCGAAAACTCACCTATACCACCGAAAGGTCCCGGTCACCACCGCAACGAGGGTTAGCTCAT
CCATACAAGATCTGGATACTACTAGAACAGACCAGAGCCTCCCGTCACTACACCCCTTATTGCTCACACGACAAAGAGGT
GAAGCCACCACCATCACCACAGAGCCTGGCGGAAACTTAACCATGGAGCCTGCCATGCAGGACCACCGCCTTGGCATCCA
TGCCCCTAGGCACCGCCAGTCATCCATATCACGACCACTCAACCACAATAGTGTAAGCGAAAGGCGCGTCCTTTCACCCC
TAGCCCAGCATCAACCATCGGCCCTAGGTCGGTGCCCCCATCGTAAGAACCGCCCACACCCACATCCCTAGCCGGTCCCG
GTAAATTAGACAGATATGACCTAGCAACCATATGCAGAACATGTGC
>chr5A_1
GCAGTATTTAGTTGAATA-GTTGGCATCTTCTAGGTGTTCTTCGAAAGAGCTTCACCCAAACAAGCATTTACTTATGTAG
AATTACATAAAGTTTAGACTTTGAGACGACAAGCAGAATATGTAGGTCAACGAAAGGACCATGTAAGTAAGAACGGTCTA
CGTTCAAACGAATTTTGAGTATCTACTTATAGTATGAAAAGTATGATTTAGGGTCGCGATTGTGCCGAAAGTGAAGCTCA
GGTGCTCCAATTTCTCAAACGTTGCTATTGTCGCGTGCATCTTTTCACCCCGTAAAGACAAAGGTATTGATAACTGACCA
TTCGACGTACATTTTTT--CACACACTTTCTTGAGACGGCGAGAGAGAAAAATTCAGAACCCTCTTTCGACAAAATGACC
TTTACTGGTAGTTTCAGGAATTCAATAACGACACAAACAAACAAATATATTCCATATACTTCGTCCATAAAGAAATATAA
GAGCGTTTAGATCAC-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------TATGATAAGGCAATCAGGGGACTAGCTATAGGGCCCTCTTTCGATAAGCTCAGCTGTCTACACCA
CGAAAACGTGCAATCACAAAAG-------AAAAAAAA---AACACCACAAAAATGTGAGTGGCAGCCAGCAGAGACTACC
AAGATATCTTCTGTCTGCCTTTCTGAAGGGGGTCACTGATGCCTTGGACCAAATGCGTGGAAACTTCTGCCGCACTAGCA
CCGACCAGAGAATATCAGCCACTAATACGATCTTGAGCCTGGCCTGTCAA------------TGATTCAGTATAGCGAAT
GCACTGTTTGGTTGGCTGATTGGTTG-TTTGTTCCATTCGGCCACCTT----TCTCTCTCCAGACCCTTCTTTGCTGCTT
CCCTCGTCT--CTCTGCCTCTCTGCCTGCCTATAAAAGGCCAGAACGTCTTCTCGC---TCATAAGAGGCGGCTCATCTC
TTGCATCTGTCACACTGCACAAAAGCAAAACCACTCTTCAAGAG--TAGCTA----------------------------
---------AAAGGACAAATCGGCAAGAGGTTGTGTGAGATTTGGTGCAAATCGCAAGATGGTTAAGGTATGTCACC---
GCTTGTCTTGTTCCAGGACTAGCTA-GTGTTCAGTTTGATTAATTTTGTGCATCGTTCTGAATTTTTGG--GTATTTGTT
GCAGCAAAAGATTGTCCTCAAGTTAGCTCTGGACGACGAGAGGAAGAGGAGGAAGGCCTTCAAGGCCGCCGTTGGCATG-
--------------------------------------------------------------------------------
---------------------TCGGGCGTGACATCCGCAACGATGGAGGGGGACAAGATCATCATCGTCGGGGACGGCGT
CGACCCGATCACGCTGACCACGATGCTCCGGCGCAGCCTGGGCTACGCCGAGCTCCTCAGCGTGTCGTCCGGCGACGACA
AGAAGAAGGACGGC------------------TACGGCGCCGCCTACGGGTACGGCGGCGGCGAGAAGAAGGACGGCTAC
GGCGCGGCCTACGGGTACGGCGGG---------------------------------------------G----------
--------GCGAGAAGAAGAAGGACGGCTACGGGTACGGCGGCGCCGACGGTGGCGGGAGCGGCATGAGCTTCGGCGGCA
AGGAGGGTGGCGGCTCCAAAGGTGG---------CGGCGGCGGCGGCGGATACTCTCAGAACGCGGTTGCGCCGGTCACG
TACCCCGCGTACCAGCAGTACAACGCCATGCCGTCCTACCCGGTTTACTCCTACC------CTGCTCCGGCTTATCAGCA
TCAAGAACAGGATCCCGGCTGCAGCATTATGTAGTAGTGGCA---------TACTC-------------TAGTTGTTAGT
TAAGGGGAGATGATGCGTCG--GAGAGAT----CTGGAGAGTTGCGAGCGGTGTTCAGGCCATGATTTTGATGGCCTGAC
CCAAAAGTTGGCTGAGAGGGCAGAGAGATGCTGGCTCCCTGAGCACTGAGTAGTG----CTCTACATATGTACAGTACA-
-------------GGTTTGCTGGATCAGCAATGGTGGTTTGGAGCGTGGTAACAGATTGTACAGGAGGAATGAATAAAAG
GAAACTCAGGTGT-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------
>chr5B_1
GCAATATTTAGTTGAATTTGTGGGCATCTTGTACGCGTTCTTCCAAAGAGCTTCACCAAAACAAACA-TTACTTAAGTAG
AATTACATAAAGTTTAA--------ACGACAAGCAGAATATCTAGGTCAACGTAAAGGCTGTCTAAGTAAGAATGGTCTA
CGTTCAAACGAATTTTGAGTATCTACTTATAGTATGAAAAGTATGATTTAGGGTCACGATTGTGCCGAAAGTGAACCTCA
GGTGCTCCAATTTCTCGAACGTCAATATTGCCATTTTCAAT--------CCGTAAAGAAAAAGGTATGGATAACTGGCCA
TTCGACGTATATTTTTTCACA--CACTTTCTTCAGACGGCAAGAGCAAAAAATTCAGAACCCTCTTCCGACAAAATGACC
TTTACTGATAGTTCCAGGAATTCAATAACGGCAGAAACAAACAAATATATTCTATATAAGTATCACCTGTCCCAAAATAA
GTATCTCAAACTTACTACAACACTGTATTAAGGGAGTACCTAGAACTCATCTAGATGAGATATAATTTGGTCTCATTCAT
TTTGAAAACAAGAACAGATACAACCCACGTCAGCACACACGCATCTTATAGCATCACATCCAATGCCTATAAAAGATGAA
TGAGACCAAATTATATCTCATCTAGATGAGTTCTAGCAAAACTGCTGTATTAAAGTTAGTATAAAGTTAAGACACTTATT
TTGAGACGGGGAGTATATGATAAGGATATGG------------------CCTCTTTCGATAAGCTCAGCTGTCTACACCA
CGGAAATGTGCCATCGCAAAAGGAAAAGAAAAAAAAA---AACACCACGAAAATGTGAGTGGCAGCCAGCAGAGATTACC
AAGATATCTTCTGTCTGCCTTTCTGAAGGGGATCACTGATGCCTTGGACC-AATGCGTGGAAACTTCTGCCGCACTAGCA
CCGACCAGGGAGTATCAACCACTAATACGATATTGAGCCTGGCTGTCAATGATTCAGTATAGTGATTCAGTATAGCGCAT
GCACTGTTTGGTTGGCTGATTGGTTG-TTTGTTCCATTTGGCCACCTT----TCTCTCTCCAGACCCTTCTTTGCGGCTT
CCCTCGTCC--CTCTGCCTCTCTGCCTGCCTATAAAAGGCCACAACGTCTTCTCGC---TCATAAGAGGCGGCTCATCTC
TTGCATCTGTCACACTGCACAAAAGCAAAATCAATCTTCTGGAG--TAGCTAGCTACTCTGCTAGATAGTGTACTGTCAA
AGCTAGCTTGGAGATCC----------------CGTGAGAGTTTGTGCAAGTTGCAAGATGGTTAAGGTATGTTCAGTTT
GCTTCTCTTGTTCCAGGACTAGCGA-GTGTTCAGTCCGATCAATTTTGTGCATAGTTCTGAATTTTC--TTGTATCTGTT
GCAGCAAAAGATTGTCCTCAAGTTGGCTCTGGATGATGAGAGGAAGAGGAGGAAGGCCTTCAAGGCTGCCGTTGGCATG-
--------------------------------------------------------------------------------
---------------------TCAGGCGTGACATCCGCGACGATGGAGGGGGACAAGATCATCATCGTCGGGGACGGCGT
CGACCCGATCACGCTGACCACGATGCTCCGGCGCAGCCTGGGCTACGCAGAGCTCCTCAGCGTGTCCTCCGGTGACGACA
AGAAGAAGGACGGC------------------TACGGCGCCGCCTACGGGTACGGCGGCAGCGAGAAGAAGGACGGCTAC
GGCGCCGCCTACGGGTACGGCGGCAGCGAGAAGAAGGACGGCTACGGCGCAGCCTATGGGTACGGCGGCG----------
--------GCGAGAAGAAGAAGGACGGCTACGGGTACGGCGGCGCCGACAGCAGCGGGAGCGGCATGAGCTTCGGCGGCA
AGGAGGGTGGCGGCTCCAAAGGTGG---------CGGAGGCGGCGGCGGATACTCTCAGAACGCGGTTGCGCCGGTCATG
TACCCCGCGTATCAGCAGTACAACGCCATGGCGTCCTACCCGGTTTACTCGTCCTACCCTGCTCCTCCTGCTTATCAGCA
TCAAGAACAGGATCCCGGCTGCAGCATTATGTAGTACGTACTGTACTACTGTAGTA-------------TACTTGTTAAT
TAAGGAGAGATGATACGTCG--GCGAGAT----CCGGATAGTTGCGAGCGGTGTCCAGGCCATGATTTTGATGGCCTGAC
CCAAAAGTTGCCGGAGAGAGCAGAGAGATGCTGGCTCCCTGAGCACTGAGTAGTACGTACTCTACATATGTACAGTACA-
-------------TGTTGGTTGGATCAGCAATGGTGGTTTGCAGGGTGGTAACAGATTGTACACGAGGAATGAATAAAAG
GAAACTCAGGTGT-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------
>chr5D_698
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------GAGCCAGGCGCGTCAA------------TAATTCAGTATAGAGAAT
GCACTGTTTGATTGGCTGATTAGTTG-TTTGTCCCATTTGGCCACATT----TCTCTCTCCAGACCCTTCGTTGCTGCTT
CGCTCGTTC--CTCTT-CTCTCTGCCAGCCTATAAATGGCCAGAACGTCTTCTTGC---TCATAAGAGGGGGCTCGTCTG
TTGCATCTGTCACATTGCACGAAAGCAAAACCACTCTTCAAGAG--TAGCTAGTCTGC--------TTAGTCTGCTGCAA
ATCTAGCTAAAAGGACAAATCGACTAGAGGTTGTGTGGGATTTGGTGCAAGTCGCAGGATGGTTAAGGTATGTTACC--T
GCTTGTCTTGTTTCGGGACAA---A-GTGTTCAGTTTGCTCAATTTTGTGCGTCGTTCTGAATTTT---TTGTATTTGTT
GCAGCAAAAGATTGTTCTCAAGTTGGCTCTGGATGACGAGAGGAAGAGGAGGAAGGCCTTCAAGGCTGCCGTTGGCATGT
CAGGTATGAACAAGCCACAGATAACAGTTAATCGGTTAATCCATAATCCGTCGTTCCAATCTTCTTCTTGTGCTTACGAG
GAGGTGCTCAATTTCAATTCTGCAGGCGTGACATCCGCGGCGATGGAGGGGGAAAAGATCATCATCGTCGGGGACAGTGT
CGACCCGATCACGCTGACGACGGTGCTCCGGCGCAGCCTAGGCTACGCAGAGCTCCTCAGCGTGTCGTCCGGCGACGACA
AGAAGAAGGATGGCTACGGCGCCGCCTATGGGTACGGCGCC---------------------------------------
---------------------------------------------------------------------G----------
--------GCGAGAAGAAGAAGGACGGCTATGGATACGGCGGCGACG------------GCGGCGGGAGCTTTGGCGGCA
AGGAGGATGGCGGTTCCAAAGGTGG---------C---GGCGGGGGCGGCTACTCTCAGAACGCGGTTGCGCCGATCACG
TACCCCGCCTATCAGCAGTACAACGCCATGCCGTCCTACCCGGTTTACTCCTCCTACCATGCTCCTCCTGCTTATCAGCA
CCAAGAACAGGATACCGGCTGCAGCATTATGTAGTAGC-----------------ATAGTACTACTCCGTAGTTGTTAGT
TAAGGAGAGATGATGGGCTGGCGAGAGAT----CAGGAGAGTTGCGAGCTGTGTTCAGGCCATGA--TTGATGGCCTGAC
CCAGAAGTTGGCTGAGAGAGCAGAGCGATGTTGGCTGCCTGGGCACTGAGAAGCAC--------CGTATGTACAGTACA-
-------------GGTTGGTTGGATCAGCAATGGTGGTTTGGAGCGTGGTAACATATTGTACAGGAGGAATGAATAAAAG
GAAACTCAGGTGT-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------
>chr5A_698
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------GAGCCAGGCGCGTCAA------------TAATTCAGTATAGAGAAT
GCACTGTTTGATTGGCTGATTAGTTG-TTTGTCCCATTTGGCCACATT----TCTCTCTCCAGACCCTTCGTTGCTGCTT
CCCTGGTCC--CTCTT-CTCTCTGCCTGCCTATAAAAGGCCAGGACGTCTTCTTGC---TCATAAGGGGCGGCTCATCTG
TTGCATCTGTCACATTGCACAAAAGCAAAACAACTCTTCGAGTAGCTAGCTAGTCTGC--------TAGTGTACTGTCAA
AGCTAGCTTGGAGATTC----------------TGTGAGACTTTGTGCAAGTTGCAAGATGGTTAAGGTATATTCAGTTT
GCTTGTCTTGTTCCAGTCCAGGACTGGTGTTCCGTTTGCTCAAATTTGTGCGTCGTGCTGAATTTTTGGA--TATTTGTT
GCAGCAAAAGATTGTCCTCAAGTTGGCTCTGGATGATGAGAGGAAGAGGAGGAAGGCCTTCAAGGCTGCCGTTGGCATGT
CAGGTATGAACAAGCCACAAATAACAGTTAAT--------CCATAATCCGTCGTTCC-ATCTTCTTCTTGTGCTTACGAG
GAGGTGCTCAATT-CAATTCGACAGGCGTGACATCCGCGGCAATGGAGGGGGAAAAGATCATCATCGTCGGGGACGGCGT
CGACCCGATCACGCTGACGACGGTGCTCCGGCGCAGCCTAGGCTACGCAGAGCTTCTCAGCGTGTCGTCCGGCGACGACA
AGAAGAAGGACGGC------------------TACGGCGCC---------------------------------------
---------------------------------------------------------------------G----------
--------GCGAGAAGAAGAAGGACGGCTATGGATACGGCGGCGACG------------GCGGCGGGAGCTTTGGCGGCA
AGGAGGGTGTCGGTTCCAAAGGTGG---------C---TGCGGCGGCGGCTACTCTCAAAACGCGGTTGCGCCGATCACG
TACCCCGCGTATCAGCAGTACAACGCCATGCCGTCCTACCCGGTTTACTCCTCCTACCCTGCTCCTCCTGCTTATCAGCA
TCAAGAACAGGATCCAGGCTGCAGCATTATGTAGAT--------------------------------GTAGGTGTTAAT
TAGGGAGAGATAATGCGTCGGCGAGGAGCAGGGC--------------CGGGGTTTAGGCCATGA--TTGATGGCATGAC
CCAGAAGTTGGCCGAGAGAGGAGAGCGATGTTGGCTGCCTGAGCACTGAGCAGTACGTA---------TGTACAGTACAG
TACAGTACAGGTTGGTTGGTTGGATCAGCAATGGTGGTTTGGAGCGTGGTAACAGATTGTACAGGAGGAATGAATAAAAG
GAAACTCAGGGT--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------
>chr5B_698
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------GAGCCAGGCGCGTCAA------------TAATTCAGTATAGAGAAT
GTACTGTTTGATTGGCTGATTACTTGTTTTGTCCCATTTGGCCACATT----TCTCTCTCCAGACCCTTCGTTGCTGCTT
CCCTCGTCCCTCTCTT-CTCTCTGCCAGCCTATAAATGGCCAGGACGTCTCCTTGCTGCTCATAAGAGGCGGCTCGTCTG
TTGCATCTGTCACATTGCACGAAAGCAAAACCACTCTTCAAGAG--TAGCTAGTCTGC--------TTAGTCTGCTGCAA
ATCTAGCTAAAAGGACAAATCGACTAGAGGTTGTGTGGGATTTGGTGCAAGTCGCAGGATGGTTAAGGTATGTTACC--T
GCTTGTCTTGTTCCAGGACAA---A-GTGTTCAGTTTGCTCAATTTTGTGCGTCGTTCTGAATTTTT--TTGTATTTGTT
GCAGCAAAAGATTGTCCTCAAGTTGGCTCTGGATGATGAGAGGAAGAGGAGGAAGGCCTTCAAGGCTGCCGTTGGCATGT
CAGGTATGAACAAGCCACAGATAACAGTTAATCGGTTAATCCGTAATCCGTCGTTCC-A---TCTTCTTGTGCTTACGAG
GAGGTGCTCAATT-CAATTCCTCAGGCGTGACATCCGCGGCGATGGAGGGGGAAAAGATCATCATCGTCGGGGATGGCGT
CGACCCGATCTCGCTGACGACGATGCTCCGGCGCAGCCTAGGCTACGCAGAGCTCCTCAGCGTGTCCTCCGGCGACGACA
AGAAGAAGGACGGC------------------TACGGCGCC---------------------------------------
---------------------------------------------------------------------GCCTACGGGTA
CGGCGCCGGCGAGAAGAAGAAGGACGGCTATGGATACGGCGGCGACG------------GCGGCGGGAGCTTTGGCGGCA
AGGAGGGTGGCGGTTCCAAAGGTGG---------C---GGCGGCGGCGGCTACTCTCAAAACGCGGCTGCGCCGATCACG
TACCCCGCGTATCAGCAGTACAACGCCATGCCGTCCTACCCGGTTTACTCCTCCTACCCTGCTCCTCCTGCTTATCAGCA
TCAAGAACAGGATCCTGGCTGCAGCATTATGTAGTAGC-----------------A-------------TAGTTGTTAGT
TAAGGAGAGATGATGAGTCGGCGAGAGAT----CAGGAGAGTTGCGAGCTGTGTTCAGGCCATGA--TTGATGGCCTGAC
CCAGAAGTTGGCTGAGAGAGGAGAGCGATGTTGGCTGCCTGAGCACTGAGCAGTACGC---------ATGTACAGTACA-
-------------GGTTGGTTGGATCAGCAATGGTGGTTTGGAGCGTAGTAACAGATTGTACAGGAGGAATGAATAAAAG
GAAACTCAGGGTATC-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------
>SNPs
---------------------------------S-------------------------------------------S--
------------------------------------------------------------------------------S-
-------------S--------------S---------------------------------------------------
-------------------------------S---------S--------------------------------S-----
--------------------------------------------------------------------------------
---------------------------------------------------------S--SSS-S---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------S---------------------------------S----------------
------------------------------------SSSS------------------------------------S---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------SSSS----------------------------
--------------------------------------S-----------------------------------------
-------------------------------SS-----------------------------------------------
------------------------------------------------S-------------------------------
-------------------------------S-------------S---------------------SS-----S-----
------------------------------------------------------------------S-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-S---S--------------------------------------------------------------------------
--------------------------------------------S------------S-----------------S----
-------------------------SSSSSSSSS------S---------------------S-------------S---
------------------------S-------------------------------------------------------
S-------------------------------------S-----------------------------------S--S--
-----------------------------SS-------------------------------------------------
-----S-------S---------------------------------S---S----------------------------
------------------S----------S-------S------------------------------------------
-------S-----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_1329
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------GATTCCGTGAGAGTTTGTGCG-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------
>reverse_2600
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------ATAACACCCAGCTGAAGCCC---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------
