>input_sequence_72339
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------ATATAAAAAACCATGTGGTGTAGAAGTCTTGCATA
ACCAAAGATTGATCAACACACCTGCCTAGTGTTAACATCTTCTACAAGAAAGATGGCTAGTTCTAAAGTAATGTGGGTGT
TCTGCCTCCTAGCTTTACTGGCTTTCACTTCTTGTTCTTATCATGTACGAGCAGAAGATCATGCCACCAAGGAGAAAAAT
GAGGTGATGGAGTATTGCAAGAGGTACATATTCAAAAATTATGGCGATCAGTTTCCTGACCCCCACAGGAAATGTTGCCA
AACAGTAAGAGAATCAAGACACATCCATGCTATGTGCCAGAAATTCACGCACGCGGATTTGCATAAGATCAGTCTAGCCA
AGTGGGCTCATGTTACATATTGGTGTGGATA-------------------------------------------------
----TAT-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------TAGCATTTTGATGTAATTTCCAAGCTTATCTTCATGAAATTAATTACTTACGAGGAACACAAT
CTCATATGTAGGTTTCATCGTTCCAGATTATAGTGCGCCATCACCTCCAGAACACTAATCGTAAGGCCGGTCTGGTCAAA
TAAGGAAAGGAGTGTTATAATATGGAGCACTTAGTCTAAGGCAGTCTTAT----------------------------CG
AACAAAGGAAGGGATGCTATGATATTGATGCTTTATCATAGGACCTCTGCAATAATGCATCTTACTTTTAATTTTATGAC
TA------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>chr3D_1_TraesCS3D01G092700
ATATATAGAGACAATGTCTATCACATATACAAAAAATGTATAAAAAAATAAAATGTGTATGAAACAATGTAATCATGTAT
TTAAAAAAGTTAATCAAGCATTTTCAAAAGATGTTGAAGAAGTGTTTAAAAAATGTTAAGCAAGCATTTGGAAAATGTTA
ACTGTGTATAGATTTTTTTGCCATGTATTAAAAAATGATAAAAAATCAGCATGTATATAAAAAATGTAATCAAGAATTTA
GAAAACTGTTGAAATATTATTTGAAAAATGATAAATGTGTATAGAATAAATGTTAACTATGTATTAAAATGATGAAATTT
TATTGATCATTTATAGGCTGCGTCCACGGGGACCTTTTTCCCCTTAATCACTGTTTGATAACCGGAGTGGGGAAGAACGG
TGGTGCCGTATGATACGG-GCTACCGCGTGTATGCACATATCTGTACCGGCTCTGCCCATAAATAGAAATATGCAAAGTA
GCATTGATGTGCGCTAGTGGGGAATCCAGACTCCATGGGAAGGCCTTAATCCTATTGATTTCGACATTCTACTTTACGTC
ACCTGTTACTAAATTGTATTTCAGTATTTT-ACCTTTATGCTCGCTACCC-GTTTTCACCATTTTACTACTACGTTGGAT
TTCCTACAACTTGCAGGCATGGCTATTTAAAAAGTAAATGTGGATGTCTGGGTAGTGCACCCACTAGATTAATTACACAT
GTAATCCGCCAACACTAAATGCAAATTTGCAACACACTTATCTATATATTAAATGAGGGCATATCCTAGCATGATATGGT
CAGTCTTATTAATGCTTTAACATATATACCAATCTTAGAAAATCAATTTTAGCAAACAAAATTAGC-CCGCGAGCATTCA
ATATGGTTACCGGATATCGCAAGGCCATCCATAAGATTTAAGATCTTATCCAACAAACTAAATCTACATGTAGATTTG-T
TGGATGGAGAGATGTGGTATTTAAGTGTGCTCACCACCATAGCCCATATAAAAAACCATGTGGTGTAGAAGTCTTGCATA
ACCAAAGATTGATCAACACACCTGCCTAGTGTTAACATCTTCTACAAGAAAGATGGCTAGTTCTAAAGTAATGTGGGTGT
TCTGCCTCCTAGCTTTACTGGCTTTCACTTCTTGTTCTTATCATGTACGAGCAGAAGATCATGCCACCAAGGAGAAAAAT
GAGGTGATGGAGTATTGCAAGAGGTACATATTCAAAAATTATGGCGATCAGTTTCCTGACCCCCACAGGAAATGTTGCCA
AACAGTAAGAGAATCAAGACACATCCATGCTATGTGCCAGAAATTCACGCACGCGGATTTGCATAAGATCAGTCTAGCCA
AGTGGGCTCATGTTACATATTGGTGTGGATA-------------------------------------------------
----TAT-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------TAGCATTTTGATGTAATTTCCAAGCTTATCTTCATGAAATTAATTACTTACGAGGAACACAAT
CTCATATGTAGGTTTCATCGTTCCAGATTATAGTGCGCCATCACCTCCAGAACACTAATCGTAAGGCCGGTCTGGTCAAA
TAAGGAAAGGAGTGTTATAATATGGAGCACTTAGTCTAAGGCAGTCTTAT----------------------------CG
AACAAAGGAAGGGATGCTATGATATTGATGCTTTATCATAGGACCTCTGCAATAATGCATCTTACTTTTAATTTTATGAC
TAATAAAAGGACTGCC-GCATGTTCTCTTTGTGTTTAGCATGATATTTAGTTGTCCATCGACATACATGGCCTCAATCAA
TGACTTTCACTTCTGATAAAATAGACTGCTGAATTAAATCCAAAGTCTTGTAAACAAACATA----GCTTGTTCTATTCC
TAATAATCACTATAATAAACACTAATAAATAATTTGTGTTTGTCGAATGGCATGGTCTTTGCCGAGC---ATTTTACGGG
ATATTGGCAGACCACCTATTTGTCAAGAACCACACTCGGTAAAAGAAAGCACTTGATAGAGTCTTTAGTTCATCGAGAGC
TGTGAGAAAAAT---------------AACACTCGGCCAATGCAACTTTTGATGAGAGCTCGTGACATAATAC---TCGA
CAACTAGGAGCCATGTGGCACAGTCGTCCAAGGTTGACGGCTCTGTGACACTAATGCGT-CCCAGACACGAGGCTATGAT
TTGCCGGCAATTTGGGAGCTCTTAACCGGCGCCTTCAGCATCGGTTGGTGTTTCCTACGCCCACGCGGTTGATGGTATGG
GCCGGCCCACCACAAGGCGAGGCGGATCGCTCGCCAGCGCATCTTCGTATGCTTTTGTTGACCGGTTGACAGTTGACCAG
TTGGCCGGTCAACCATTTACTTTTGAATTAAAAAACAAAAAGTTTTTCAAAAATGTTCATGGATTTTGGAAAAATAAACT
AAAAAAAAAATAAAAAACCACAAATTTGAAAAAAA-T--CTCATAAATTTTGAAAAAACTCCACGAATTGGAAAAAAATC
AT-CGATACATATGGTCGCTAGCTTTTCCTCGAAAGAAATTTTAATAGTTAGCTTCGAAGAGTGACACAATTTTGAGGGC
CTAGCTTTATTAAAATTCTGATCGCTAGCTTCGTTTGTGTTTTAGCACTGATCGCTAGGTTCTTTTTTTCTTTCTTTTAG
ATACCGATCGCTAGCTTTGTGCTAACCGGTAGCCTACTAGCACAGACGAGCGGTTGAACATATAGGCCAGCCC
>chr3D_1
ATATATAGAGACAATGTCTATCACATATACAAAAAATGTAT-AAAAAATAAAATGTGTATGAAACAATGTAATCATGTAT
TTAAAAAAGTTAATCAAGCATTTTCAAAAGATGTTGAAGAAGTGTTT-AAAAATGTTAAGCAAGCATTTGGAAAATGTTA
ATTGTGTATAGATTTTTTTGCCATGTATTAAAAAATGATAAAAAATCTGCATGTATATAAAAAATTATATCAAGAATTTA
GAAAACTATTGAAATATTATTTGAAAAATG-TAAATGTGTATAGAATAAATGTTAACTATGTATTAAAATGATGAAATTT
TATTGATCATTTATAGGCTGCGTCCACGGGGACCTTTTTCCCCTTAATCACTGTTTGATAACCGGAGTGGGGAAGAACGG
TGGTGCCGTATGATACGGGGCTACCGCGTGTATGCACATATCTGTACCGGCTCTGCCCACAAATAGAAATATGAAAAGTA
GCATTGATGTGCGCTAGTGGGGAATCCAGACTCCGTGGGAAGGCCTTAATCCTATTGATTTTGACATTCTACTTTACGTC
CCCTGTTACTAAATTCTATTTCAGTATTTTTACCTTTATCCTCGCTACCCCGTTTTCACCATTTTACTACTACGCCGGAT
TTCCTACAAATTGCAGGCATGGCTATTTAAAAAGTAAATGTGGATGTCTGGGTAGTGCACCCACTAGATTAATTACACAT
GTAATCCGCCAACACTAAATGCAAATTTGCAACACACTTATCTATATATTAAATGAGGGCATATCCTAGCATGATATGGT
CAGTCTTATTAATGCTTTAACAAATATACCAATCTTAGAAAATCAATTTTAGCAGAAAAAATTAGC-CCGCGAGCATTCA
ATATGGTTACCGGATATCGCAAGGCCATCCATAAGATTTAAGATCTTATCCAACAAACTAAATCTACATGTAGATTTG-T
TGGATGGAGAGATCTGGTATTTAAGTGTGCTCACCACCATAGCCCATATAAAAAACCATGTGGTGTAGAAGTCTTGCATA
ACCAAAGATTGATCAACACACCTGCCTAGTGTTAACATCTTCCACAAGAAAGATGGCTAGTTCTAAAGTAATGTGGGTGT
TCTGCCTCCTAGCTTTACTGGCTTTCACTTCTTGTTCTTATCATGTACGAGCAGAAGATCATGCCACTAAGGAGAAAAAT
GAGGTGATGGAGTATTGCAAGAGGTACATATTCAAAAATTACGGCGATCAGTTTCCTGACCCCCACAGGAAATGTTGCCA
AACAGTAAGAGAATCAAGACACATCCATGCTATACGCCAGAAATTCACGCACGCGGATTTGCATAAGATCAGTCTAGCCA
AGTGG-CTCATGTTACATATTGGTGTGGCAACAGATTGCACCCAGGGACTAATTGCGCAGGTGTGTTAATNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNATAGCATTTTGATGTAATTTCCAAGCTTATCTTCATGAAATTAATTACTTACGAGGAACACAAT
CTCATATGTAGGTTTCATCGTTCCAGATTATAGTGCGCCACCACCTCCAGAACACTAAACGTAAGGCCGGTCCGGTCAAA
TAAGGAAAGGAGTGTTATAATATGGAGCACTTAGTCTAAGGCAGTCTTAT----------------------------CG
AACAAAGGAAGGGATGCTATGATATTGATGCTTTATCATAGGACCTCTGCAATAATGTATCTTACTTTTAATTTTATGAC
TAATAAAAGGACTGCCCGCATGTTCTCTTTGTGTTTAGTATGATATTTAGTTGTCCATTGACATACATGGCCTCAAGCAA
TGACTTTCACTTCTGATAAAATAGACTGCTGAATTAAATCCAAAGTCTTGTAAACAAACATA----GCTTGTTCTATTCC
TAATAATCACTATAATAAACACTAATAAATAATTTGTGTTTGTCGAATGGCATGGTCTTTGCCGAGC---ATTTTATGGG
ATATTGGTAGACCACCTATTTGTCGAGAACCACACTCGGTAAAAGCAAGCACTTGATAG--TCTTTAGTTCGTCGAGAGC
TATGAGAAAAATACCCGGCAACCCCAAAACACTCGGCCAATGCAACTTTTGATGAGAGCTCGTGACATGGTAC---TCGA
CAACTAGGAGCCATGTGGCACAGCCGTCCAAGGTTGAAGGCTCTGTGACACTAATGCGTCCCCAGACACGAGGCTATGAT
TTGCCGGCAATTTGGGACCACTTAACCGGCGCCTTCAGTGTCAGTTGGTGTTTCCTACGCCCACGCAGTTGACAGTATGG
GCCGGCCCACCACAAGGCGAGGCGGACCGCGCC--------TCTTCGTATGCTTTTGTTGACCGGTTGACAGTTGACCAG
TTGGCCGGTCAACCATTGACTTTTGAATTAAAAAACGAAAAGTTTTTCAAAAATGTTCATGGATTTTGGAAAAATAAACT
A--AAAAAATAAAAAAACCACAAATTTGAAAAAAAAACACTCATAAATTTTGAAAAAAGTCCACGAATTGGAAAAAAATC
AT-CGATGCATATGATCGCTAGCTTTTCCTCGAAAGAAATTTTGATAGTTAGCTTCGAAGAGTGACACCATTTTGAGGGC
CTAGC----TTAAAATTCTGATCGCTAGCTTCGTTTGTGTTTTAGCACTGATCGCTAGGTTCTTTTTTTCTTTCTTTTAG
ATACCGATCGCTAGCTTTGTGCTAACCGGTAGCCTACTAGCACAGACGAGCGGTTGAACATATAGGCCAGCCC
>chr3D_367
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------ATCACAGTTAGATAACCGGAGTGGGGAAGAACAG
TGGTGCCGTATGATACGGGGCTATCGCGTGTATGCACATATCTATACCGACTCTGCCCACAAATGGAAATATAAAAAGTA
GCATTGATGTGCGCTAGTGGGGAATCCAGACTCTCTGGGAAGGCCTTAATCCTGTTGATTTCGACATTCTACTTTACGTC
CCCTGTTACTAAATTCTATTTCAGTATTTT-ACCTTTATGCTCGCAACCCGGTTTTCACCATTTTACTACTATGTTGGAT
TTCCTACAACTTGCAGGCATGGCTATTTAAAAAGTAAATGTGGATGTCTGGGTAGTGCACCCACTAGATTAATTACACAT
GTAATCCGCCAACACTAAATGCAAATTTGCAACACACTTATCTATATATTAAATGAGGGCATATCTTAGCATGATATGGT
CAGTCTTATTAATGCTTTAACAAATATACCAATCTTAGAAAATCAATTTTAGCAAAAAAAA--AGC-CCGCGAGCATTCA
ATATGGTTACCAGATATCGCAAGGCCATCCATAAGATTTAAGATCTTATCCAACAAACTAAATCTACATGTAGATTTG-T
TGGATGGAGAGATGTGGTATTTAAGTGTGCTCACCACCATAGCCCATATAAAAAACCATGTGGTGTAGAAGTCTTGCATA
ACCAAAGATTGATCAACACACCTGCCTAGTGTTAACATCTTCCACAAGAAAGATGGCTAGTTCTAAAGTAATGTGGGTGT
TCTGCCTCCTAGCTTTACTGGCTTTCACTTCTTGTTCTTATCATGTACGAGCAGAAGATCATGCCACCAAGGAGAAAAAT
GAGGTGATGGAGTATTGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------TGTAATTTCCAAGCTTATCTTCATGAGATTAATTACTTACGAGGAACACAAT
GTCATATGTAGGTTTCATCGTTCCAGATTATAGTGCGCCACCACCTCCAGAACACTAATCGTAAGGCCGGTACGGTCAAA
TTAGGAGAGGAGTGTTATAATATGGAGCACTTAGTCTAAGGCAATCTTAT----------------------------CG
AACAAAGGAAGGGATGCTATGATATTGATGCTTTATCATAGGACCTCTGCAATAATGTATCTTACTTTTAATTTTATGAC
TAATAAAAGGACTGCCCGCATGTTCTCTTTGTGTTTAGCATGATATTTAGTTGTCCATCGACATACATGGCCTCAACCAA
TGACTTTCAATTCTGATAAAATAGACTGCTGAATTAAATCCAAAGTCTTGTAAACAAACATA----GCTTGTTCTATTCA
TAATAATCACTATAATAAACACTAATAAAAAA-TTGTGTTTGTCGAATGGCATGGTCTTTGCCGAGC---ATTTTACGGG
ATATTGGTTGACCACCTATTTGTCGAGAACCACACTCGGTAAAATCAAGCACTTGATAGAGTCTTTAGTTCGTCGAGAGC
TGTGAGAAAAATACTCGGCAACCCCAAAACACTCGGCCAATGCAACTTTTGATGAGAGCTCGTGACATAGTAC---TCGA
CAACTAGGAGCCATGTGGCACAGTCGTCCAAGGTTTACGGCTCTGTGACACTAACGCGTCCCAA-ACACGAGGCTATGAT
TTGCCGGCAATTTGGGACCTCTTAACCGGCGCCTTCAGCGTCGGTTGGTGTTTCCTACGCCCATACGGTTGACGATATGG
GCCGGCCCACCACAAGGCGAGGCGGATAGCTCGCCAGCGCATCTTCGTATTCTTTTGTTGACCGGTTGACAGTTGACCAG
TTGGCCAGTCAACCATTGACTTTTGAATTAAAAAACGAAAAGTTTTTCAAAAATGTTCATGCATTTTGGAAAAATAAACT
A--AAAAAA-AAAGAAACCACAAATTTGAAAAAAAAT--CTCATAAATTTTGAAAAAAGTCCACGAATTGGAAAAAAAAT
TACCGATACATATGGTCGCTAGCTTTTCCTCGAAAGAAATTTTGATAGTTAGCTTTGAAGAGTGACACAATTTTGAGGGC
CTAGCTTTATTAAAATTCTGATCGCTAGCTTCGTTTGTGTTTTAGCACTGATCGCTAGGTTCTTTTTTTCTTTCTTTTAG
ATACCGATCCCTAGCTTTGTTCTAACCTGTAGCCTACTAGCACAGACGAGCGGTTGAACATATAGGCCAGCCC
>chr3A_665
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------TAAATAGTAAATCTGGATATCTATGTAGTGCACCCACTAGATTAATTACACAT
GTAATCGGGCAACACTAAATGCAAATATGCAATAAACTTATCTCTATATAAAATGAGGGCATATCCTAGCATGATATGGT
TAGTCTTATTAATGCTTTAATAAATATACCAATCTTAGAAAATCAATTTTAGCACTTTT--TTTGGACTGGGAGCATTCA
ATATGGTTATCAAATATCGCAAGGCCATCCATAAGATTTAAGATCTTATCCAACAAATGAAATCTACATGTAGATTTTTT
TGGTTGGAGAGATCTTGTATTTAAGTGTGCTCACCACCACAGCCCATATAAAAAACCATGTGGTGTAGAAGTTTTGCATA
ACCAAAGATTGATCAACACACCTACCTAGTGTTTACATCTTCCACAAGAAAGATGGCTATTTCTAAAGTAATGTGGGTGT
TCTGCCTCCTAGCTTTACTGGCCTTCACTTCTTGTTCCTATCATGTACGAGCAGACGATCATGCCACCAAAGAGAAAAAT
GAGGTGATGGAGTATTGCAAGAGGTACATATTCAAAAATTACGGTGATCAGCATCCTGACCCCCATAGGAAATGTTGCCA
AATAGTAAGAGAATCGAGAAACATCCATGCTATATGCCAGAAATTCATGCACGCGGATTTGCATAAGATCAGTCTAGCCA
AGTGGGCTCATGTTACATATTGGTGCGGCAACGGATTGCACCCAGGGACTAATTGCGCAGGTGTGTTAATATGATTAAAT
ATATTAC-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------TAGCATTTTGATATAGTTTCCTCGCTTATATAAATGAAATTAATTACTTACGAGGAACTCAAT
CTCATATGTAGGTTTCATCGTTCCAGATTATAGTGCGCCACCACCTCCAGAACACTCAGCGTAAGGCTGGTCTGGTCAAA
TAAGGAAAGGAGTGTTATGATATGGAGCACTTAGTCTAAGGCAGTCTTAATCCCCAAAAGAAAATAAGGCAGTCTTAATG
AACAAAGGAAGAG----TATGGTATTGATCCTTTATCATGGGACCTCTGCAATAATGTATCTTACTTTTAATGTTGTGAT
TAATAAAAGGACTGCCTGCATG-TTTCTTTGTGTTTAGCATGATATTTAGTTGTCCATCGACATACATGGCCTCAATAGA
TGACTTTCACTTCTCATTAAATGGAATGCTGAATTAAATCAAAAGTCTTGAAAGCAAACATATATAGCTTGTTCTATTCC
TAATACTCACTATAATAAACACTAATCAAAATTTTGTGTTTGTCAGGTGCCATAGTCTTTGCCAAGATCTATTTTATGGG
ATGTCAGCAAACCACCTATTTTATGAGAACCACACTCGGTAAAAGCAAGCACTTGATAGAGTGTCTTGTTTGCCGAGAGC
TGTCACAAAAATAGTCAGCAACCCCAAAACACTCGGCCAGTGCAACTTTTGATGAGAGCTCGCAACATAGTACTACTCAG
CAACACGGAGCCATGGGGCAAGT---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>chr3A_665
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------TAAACAGTAAATCTGGATATCTGGATAGTGCACCCACTAGATTAATTACACAT
CTAATCGAGCAACACTAAATGCAAATATGTAATGCACTTATCTCTATATAAAAGGAGGGCCTATCCTAGCATGATATGGT
TAGTCTTATTAATGCTTTAATAAATATAGCAATCTTAGAAAATCAATTTTAGCACTTTT--TTGACA-TGGCGGCGTTCA
ATATGGTTATCGGATATCACAAGGCCATCCATAAGATTTAGGTTCTTATCCAACAAACGAAATCTACATGTAGATTTG-T
TGGTTGGAGAGATGTTGTATTTAAGTGTGCTCACCACCATAGCTCATATAAAAAACCAAGTGGTGTAGAAGTCTTGCATA
ACCAAAGATTGATCAACACACCTGACTAGTGTTAACATCTTCCACAAGAAAGATGGCTAGTTCTAAAGTAATGTGGGTGT
TCTGCCTCCTAGCTTTACTGGCCTTCACTTCTTGTTCCTATCATGTACGAGCAGAAGATCATGCCACCAAGGAGAAAAAA
GAGGTGACGGAGTATTGAAAGAGGTAAATATTCAAAAATTACGGTGATCAGTATCCTGAGCCCCACAGGAAATGTTGCCA
AATAGTAAGAGAATCAAGACACATCCATGCTATATGCCAGAAATTCACGCACGTGGATTTGCATAAGATCAGTCTAGCCA
AGTGGGCTCATGTTACATATTGGTGTGGCAACAGATTGCACCCAAGGACTAATTGTGCAGGTGTGTTAATATCATTATAT
ATATTAC-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------TAGCATTTTGATATAATTTTCTAGCTTATCTTCATGAAATTAATTACTTATGAGGAACTCAAT
CTCATAGGTAGATTTCATCGTTCCAGATTATAGTGCGCCACCACCTCCAGAATACTCAGCGTAAAGGTGGTCTAGT-AAA
TTAGGAAAGGAGTGTTATGATATGGAGCACCTAGTCTAAGGCATTCTTAAACCCCCCAA-AAAATAAGGCAGTCTTAACG
AACAAAGGAAGAG----TATGGTATTGATGCTTTATAATGGGACCTCTGCAATAATGTATCTTACTTTAAATGATGTGAC
TAATAAAAGGATTGCCCGCATGTTTTCTTTGTGTTTAGCATGATATTTAGTTGTCCGTCGACATACATGGCTTCAATAGA
TGACTTTCACTTCTCATAAAATGGAATGCTGAATTAAATCAAAAGTCATGAAAACAAACATA----GTTTGTTCTATTCC
TAATACTCACTATAATAAACACTAATCAAAATTTTGTGTTTGTCGAGTGTCATAGTCTTTGCCAATATCTATTTTACGGG
ATATCAGCAAACCACCTATTTGACGAGAACCACACTCGATAAAAGCAAGCACTTGATAGAGTGTTTCATTTGTCGAGAGC
TATGAGAAAAATACTCGGCAACCCCAAAACACTCGGCGAGTGCAACTTTTGATGAGAGCTCGCAACATAGTAC---TCGG
CAACTAGGAGCCATG-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>chr3A_665
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------TAAATAGTAAATCTGGATATCTATGTAGTGCACCCACTAGATTAATTACACAT
GTAATCGGGAAACACTAAATGCAAATATGCAATACACTTATCTCTATATAAAATGAGGGCATATCCAAGCATGATATGGT
TAGTCTTATTAATGCTTTAATAAATATACCAATCTTAGAAAATCAATTTTAGCACTTTT--TTGGC-CTGGGAGCATTCA
ATATGGTTATCAGATATCGCAAGGCCATCCATAAGATTTAGGATCTTATCCAACAAATGAAATCTACATGTAGATTTT-T
TGGTTGGAGAGATCTTGTATTTAAGTGTGCTCACCACCACAGCCCATATAAAAAACCAAGTGGTGTAGAAGTCTTGCATA
ACCAAAGATTGATCAACAGACCTGCCTAGTGTTTACATCTTCCACAAGAAAGATGGCTAGTTCTAAAGTAATGTGGGTGT
TCTGCCTCCTAGCTTTACTGGCCTTCACTTCTTGTTCCTATCATGTACGAGCAGACGATCATGCCACCAAAGAGAAAAAT
GAGGTGATGGAGTAT-GCAAGAGGTACATATTCAAAAATTACGGTGATCAGCATCCTGACCCCCACAGGAAATGTTGCCA
AATAGTAAGAGAATCGAGAAACATCCATGCTATATGCCAGAAATTCACTCACGCGGATTTGCATAAGATCAGTCTAGCCA
AGTGGGCTCATGTTACATATTGGTGCGGCAACGGATTGCACCCAGGGACTAATTGCGCAGGTGTGTTAATATGACTATAT
ATATTAC-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------TAGCATTTTGATATAGTTTCCTCGCTTATCTAAATGAAATTAATTACTTACGAGGAACTCAAT
CTCATATGTAGGTTTCATCGTTCCAGATTATAGTGCGCCACCACCTCCAGAACACTCAGCATAAGGC-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------TG-TTTCCTTTTTTTTAGCATGATATTTAGTTGTCCATCGACATACATGGCCTCAATAGA
TGACTTTCACTTCTCATTTAATGGAATGCTGAATTAAATCAAAAGTCTCGAAAACAAAC----ATAGCTTGTTCTATTCA
TAATACTCACTATAATAAACACTAATCAAAATTATGTGTTTGTCGGGTGTCATAGTCTTTGCCAAGATCTATTTTATGGG
ATATCAGCAGACCACCTATTTGATGAGAACCACACTCGGTAAAAGCAAGCACTTGATAGAGTGTTTTGTTTGCCGAGAGT
TGTGACAAAAATACTCAGCAACCCCAAAACACTCGGCCAGTGCAACTTTTGATGAGAGCTCGCAACATAGAAC---TCAG
CAACTCGGAGCCATGGGGCA------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>SNPs
-----------------------------------------S--------------------------------------
-----------------------------------------------S--------------------------------
-S---------------------------------------------S-----------------SSS------------
-------S----------------------S-------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------S-------------S------
----------------------------------S---------------------------------------------
S--------------S----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------S---------------------------------S-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------S-------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------S--------------------------------------
---------------------------------S----------------------------------------------
----------------------------SS--------------------------------------------------
------S-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------S---------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------S----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------S--------------------S-------------------------S--------
---------------------------------------------------------------------S----------
--------------------------------------------------------------------------------
-----------------S---------------------S--------------------------------S-------
--------------------------------------------------------------------------------
-----------------S------------------S-------------------------------------------
-SS------SS-----------------------------------------------S---------------------
-------------------------------------------S------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>forward_474
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------GGCTCTGCCCATAAATAGAAATATGC------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>reverse_2680
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------ATCGGTTGGTGTTTCCTACGC--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
