>input_sequence_72299
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-------ATGACGACCATGGTGGCCTTGAGCTCCTTCGCCGGTGCCGCCGTCGTCGGCCGCCCCTCCTCCTGGTCTCCGG
CGGTG---CCGCACCGTCGCACCCTCCTCGTCAGGGCCCAGACCGAGGTAAGCCTCTTTCGCCTAACTGACTCTGCCGTC
ATAACTTGTTTACTCTGTA----------------CAAGTTTC-AATTGGTTGTACTGACTCACGATGCTCTGCCTCTGC
AGCCGGATATCGAGTCGACCAAGG---ACACGACGAGCGCATCGACATCCTCCCCAACCCCAACCCC------AACCCCA
------AGTCCGGTGGCGCCCAAGCCCAAGCCC---AAG------GCTAACCCCTCGGTCTGGGACGCGCTCGCGTTCAG
CGGCCCAGCGCCGGAGCGCATCAACGGCCGGCTCGCTATGGTGGGCTTCGTGGCGGCGCTCTCCGTCGAGGCAGCGCGCG
GCGGCGCGCTACTCGACCAGGCCGGCAGTGGCGCCGGGCTGGGATGGTTCCTGACAACCGCGGCGGTGTTTTCGGTGGCG
TCGCTGGTGCCGCTGCTGCAGGGCCAGAGCGTGGAGAGCAAGTCCAGCGGCGTATGGAGCGCTGACGCCGAGCTATGGAA
CGGCCGCTTCGCCATGCTCGGCCTCGTCGCACTCGCCGTCACCGAGTTCATCACCGGCACGCCCTTCGTCAACGTCTGA-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------
>chr4B_1_TraesCS4B01G224800
CTTGGGTTGGCCCAATCGTGCTTCAGTCATGTTGATGCTGAAGCACCCTGTGATATAGTATACCTCCACATGTAAGTTAT
TCTTTGTTCCAGACTTCCAGTGTCATATCTTTCTGTTGCTCCGTTTCCCCCCATTTTGTTGTGTTCATTATTTTAGTCGT
TGTGGGAAGTGGTGTCTTGAGCCGAACTGATCATGTAGATCCTTTCCCCTTTTATGCTCTTGGTTTTCTGCATTGGGAGC
GTGTATGTC-ACAAGATGATTAAATTATATGCCTTAG--TATATAGTTCACCAAGTTATTGGGCAGTTCGTTCTGCTTTG
G---ATGTTTGTAACTGCCGCTGTCCGAAGCACAGGAAGCTTCAGCATTGTGTTATACATTTCGTTAACTTTTGATTGGC
ATCAGCTGGTTCTGGTTCAGTTCGACTGTAGAAACTTCATTCTCCGATAAACAAACCCGTATCATGCTTTGACCCGCATC
TACGTACATACTAGTACTCCAGTTAATTGTATCTGCCGTGAGAGGCTGCCA-TTTT-AAACACGAGACTGCCGACACTAA
AACATCTTCTTGGTAGCCTTTGTCATCGTGCCTCTGGAATAGAGCCCACGCTCTAAGCAGGCCTGCGTGTCTCT--AATG
GCTTCTCGTCATCTCGCGCCAAAAGACCGT------GGCACAAGTATCTCC---------GCACTTTCTGGAGTCTTCCG
CGGTCCGTGGAGTACACTTGTGCCAC--TTTTTCTGGCACCTTTTGGCGAGCTCCGGA--------GCC-CTGTGCATGG
TTCCCTGGACATCCACGTCGTGTCCCAGCTCTCGCTGCAGGCACAATTTCTACACGTTCACGGCTGGGGAGTGCCCACCG
ACGTGGCCACCGCCGCGGCCACCCC-TCGCGGCCGGGCTAGCTCGTCCTCCCCGGGCC-TATAT-AATCGCACACTCGTC
ATTGGCATCAGCACGCAATAATCAC-------AGTCC-ACAACGAACCAAGTGTGATCTAGCCAGTCCCTGCATCCTGCT
GTGAGTAATGACGACCATGGTGGCCTTGAGCTCCTTCGCCGGTGCCGCCGTCGTCGGCCGCCCCTCCTCCTGGTCTCCGG
CGGTG---CCGCACCGTCGCACCCTCCTCGTCAGGGCCCAGACCGAGGTAAGCCTCTTTCGCCTAACTGACTCTGCCGTC
ATAACTTGTTTACTCTGTA----------------CAAGTTTC-AATTGGTTGTACTGACTCACGATGCTCTGCCTCTGC
AGCCGGATATCGAGTCGACCAAGG---ACACGACGAGCGCATCGACATCCTCCCCAACCCCAACCCC------AACCCCA
------AGTCCGGTGGCGCCCAAGCCCAAGCCC---AAG------GCTAACCCCTCGGTCTGGGACGCGCTCGCGTTCAG
CGGCCCAGCGCCGGAGCGCATCAACGGCCGGCTCGCTATGGTGGGCTTCGTGGCGGCGCTCTCCGTCGAGGCAGCGCGCG
GCGGCGCGCTACTCGACCAGGCCGGCAGTGGCGCCGGGCTGGGATGGTTCCTGACAACCGCGGCGGTGTTTTCGGTGGCG
TCGCTGGTGCCGCTGCTGCAGGGCCAGAGCGTGGAGAGCAAGTCCAGCGGCGTATGGAGCGCTGACGCCGAGCTATGGAA
CGGCCGCTTCGCCATGCTCGGCCTCGTCGCACTCGCCGTCACCGAGTTCATCACCGGCACGCCCTTCGTCAACGTCTGAA
ACTAGCTAGTGTAGTGCAGTACTCTTGTACGTGCATGTACATATTTGTTGGTCATGCTGAGTAACTAGGAGCACTACGGA
C------------------------------------------------------------TCTGACGTTCTGTAAGCCT
TA------GGTTGTCTTTCTTTGGTCATGATGTCCTGGAGCCTACAATTAATGCAGGAATGAATCGTGTTCATGCTAGTA
CTCCCATTCTA---AGACGCTTGCTTGTTTTAAGTTTTAGTTTTGATCATCAATTAGACGAATAATACTCCCTCTCTCTT
AATTTACAGGGCGTGCGCGTATCCCTAGGTCGTCAGTTTGACCAACTTAATACAAGTCATATATTATGAAAGTATATCAA
TATAAACTTCAGATGTTCTATTTTCAAACGATATAGTTTTTGTGTTATATAGTTTATATTAGGATGATAAAATTGGCAAG
CTAGATATACGCGTATGACTTGTAAACTGAAACGGAGGGAGTATATAAATTTCGGGACTTAAAATTTATACCATCAAAAA
GTTATTCAAATACGAATTCAACGTTATAACTTTTGTCTTCATAACCCACATTTTCTTGGTTAAACCGATGGTCAAACTTA
ATTCCCATTTTCTTGGTTAAACCGATGGTCGAACTTGATTCCCAAAATGCGTGTGCGTCCTATTCACCTCGAACGGGGGA
GTACCACTAATTATATTTCTCGGTCGCGGAAATATTGACCAAGAACATGAATATCTTGAAAATCTCTTCTTAGTGATTTC
AAACGTTGACCTAAATATGTTTGCCCCAAAATTCCAGACCAAACGGAAACACAATTAAAAATATATTCACAATCACACTT
TTAAATTTTGGGTACATTTTATAATTTGTCTACAGATTTTTAAATCATGATTTATACAATTTGTTTGGGTTGATTTGATT
TTTTTACACGTTCACTATTTTATACTTTAAGACAGAATTCTATGTTATAAATATGTTGTACTGTAATACATAGAAGCTTC
ATTTGTGGCAGAAAAAAAAACACAAAAG
>chr4D_1
CTTGGGTTGGCCCAATCGTGCTTCAGTCCTGTTGATGCTGAAGCACCCTGTGATATAGTATACCTCCACATGTAAGTTAT
TCTTTGTTCCAGACTTCCAGTGTCATATCTTTCTGTTGCTCCGTTTCCCCCCATTTTGTTGTGTTCATTATTTTAGTCGT
TGTGGGAAGTGGTGTCTTGAGCCGAACTGATCATGTAGATCCTTTCCCCTTTTATGCTATTGGTTTTCTGCACTGGGAGC
GTGTATGTTTACAAGATGATTAAATTATATGCCTTAG--TATA--GTTCACCAAGTTATTGAGCAGTTCGTTCTGCTTTG
G---ATGTTTGTAACTGCCGCTGTCCGAAGCACAGGAAGCTTCAGCATTGTGTTATACATTTCGTTAACTTTTGATTGGC
ATCAGATGGTTCTGGTTCAGTTCGAGTGTAGAAACTTCATTCTCCGATAAACAAACCCGTATCATGCTTTGACCCGCATC
TACGTACATAGTAGTACTCCAGTTAACTGTATCTGCCGTGAGAGGTTGCCATTTTT-AAACACGAGACTGCCGACACTAA
AACATCTTGGTAGC--CCTTTGCCATCGTGCCTCTGGAATAGAACCCACGCTCTACGCAGGCCTGCGTGTCTCTCTAATG
GCTTCTCGTTGTCTCGCGCCAAAAGACCTAAACCCGGGCACAAGTATCTCCGCGTGCCTGGCACTTTCTGGAGTCTTCCG
CGGTCCGTGGAGTACACTTGTGCCAC--TTTTTCTGGCACCTTTTGGCGAGCTCCGGA--------GGCCCTCTGCATGG
TTCCCTAGGCGTCCACGTCGTGGCCCAGCTCCCGCTGCCTT-ACAACTTCTACACGCTCACGGCTGGGG-GTGCCCGCCG
ACGTGGCCACCGCCGCGGCCACCCCCTCATGGCCGGGCTAGCTCGTCCTCCCCGGGCCCTATATAAAACGCACACTCGTC
ATCGGCAACAGCACACAGTCACCAGTCACCAGAGTCC-ACAACGAAGCAAGTGTGATCTAGCCACTCCCTGCATCCTGCT
GTGAGTAATGACGACCATGGTTGCCTTGAGCTCCTTCGCTGGTGCCACCGTCGTTGTCCGCCCCGCCTCCTGGTCTCCGG
CGCTG---ACGCGTCAGCGCGCCCTCCTCGTCAGGGCGCAGACCGAGGTAAGCCTGTTTTACCTAACTGACTCTGCCATC
ATAACTTGTTTACTCTGTA----------------CAAGTTTC-AACTGGCTGTACTGACTCACGATGCTC------TGC
AGCCGGATATCGAGCCGACCAAGG---AGACGACGAGCGCGTCGACATCCTCCCCAACCCCAACCCC------AAG----
--------CCCGGTGGCGCCCAAGCCCAAGCCC---AAG------GCTAACCCCTCGGTGTGGGACGCGCTCGCGTTCAG
CGGCCCAGCGCCGGAGCGCATCAACGGCCGGCTCGCTATGGTGGGCTTCGTGGCGGCGTTCTCCGTCGAGGCAGCGCGCG
GCGGCGGGCTACTCGACCAGGCCGGCAGCGGCGCCGGGTTGGGATGGTTCCTGACGACCGCAGCGGTGTTCTCGGTGGCG
TCGCTGGTGCCGCTCCTTCAGGGACAGAGCGTGGAGAGCAAGTCCAGCGGCGTATGGAGCGCCGACGCCGAGCTATGGAA
CGGCCGCTTCGCCATGCTCGGCCTCGTCGCACTCGCCATCACCGAGTTCATCACCGGCACGCCCTTCGTCAACGTCTGAA
ACTAGCTAGTGTAGTGCAGTACGCTTGCACGTGCATGTACATATTTGTTGGTCATGCTGAGGAACTAGG---ACTACGGA
C------------------------------------------------------------TCTGACGTTCTGTAAGCCT
TATCATTAGCTTGTCTTTC-TTGGTGATGATGTCTTGGAGCCTACAATTAATGCAGGAATGAATCGCGTTCATGCTAATA
CTCCCATTCTACTAAGACGCTTGCGTATTTTAAGT---AATTTTAATCATCAATTAGACGAACAATA-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------TATAAATTTCGGGACTTAAAATTTATACCATCAAAAA
GTTATTCAAATACGAATGCAACGGTATAACTTTTGTCGTCA---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------
>chr4A_1
CTTGGGTTGGCCCAATCGTGCTTCAGTCCTGTTGATGCTGAAGCACCCTGTGATATAGTATACCTCCACATGTAAGTTAT
TCTTTGTTCCAGACTTCCAGTGTCATATCTTTCTGTTGCTCCGTTTCCCCCCATTTTGTTGTGTTCATTATTTTAGTCGT
TGTGGGAAGTGGTGTCTTGAGCCGAACTGATCATGTAGATCCTTTCCCCTTTTATGCTCTTGGTTTTCTGCATTGGGAGC
GTGTATG-TTACAAGATGATTAAATTATATGCCTTAGTATATA--GTTCACCAAGTTATTGAGCAGTTCGTTCTGCTTTG
GGAAATGTTTGTAACTGCCGCTGTCCGAAGCACAGGAAGCT----CATTGTGTTATACATTTCATTAACTTTTGATTGGC
ATCAGATGGTTC----------------TAGAAACTTAATTCTCCGATGAACAAACCCGTACCATGCTTTGACCCGCATC
TACGTACATAGTAGTACTCCAGTTAATTGTATCTGCCGTGAGAGGCTGCCATTTTTTAAACACGAGACTGCCGACACTAA
AACATCTTGGTAGC--CCTTTGTCATCGTGTCTCTGGAATAGAGCCAACGCTCTACGCAGGCCTGCGTGTCTCTCTAATG
GCTTCTCGTTATCTCGCGCCAAAAGACCTAAGCCCGGGCACAAGTATCTCCGCGTGCCCGGCACTTTCTGGAGTCTTCCG
CGGTCCGTGGAGTACACTTGTGCCAC--TTTTTCTGGCACCTTTTGTCGAGCTCCGGA--------GGC-CACTCCATGG
TGCCCTGGACGTCCACGTCGTGACC--GCTCTCGTTGCACGCAC-ACTTCTACACGTTCACGGCTGGGGAGTGCCCGCCG
------------CCGCGGCCACCCCCTCGCGGCCGGGCTAGCTCGTCCTCCCCGGGCC-TATAT-AATCGCACGCTCGTC
ATTGGCATCAGCACGCAATAATCAC-------AGTCC-ACAACGAACCAAGTGTGATCTAGCCAGTCCCTGCATCCTGCT
GGGAGTAATGACGACCATGGTTGCCTTGAGCTCCTTCGCCGGCGCCACCGTCGTCGGCCGCCCCGCCTCCTGGTCTCCGG
CACTG---CCGCGTCGGCGCGCCCTCCTCGTCAGGGCCCAGACCGAGGTAAGCCTCTTTTGCCTAACTGACTCTGCCATC
ATAACTTGCTTACTCTGAA----------------CAAGTTTG-AACTGGCTGTACTGACTCACGATGCTT------TGC
AGCCGGATATCGAGTCGACCAAGG---AGACGACGAGCGCATCGACATCCTCCCCAACCCCAACCCCGACCCCAAG----
--------CCCGGTGGTGCCCAAGCCCAAGCCC---AAG------GCTAACCCCTCGGTCTGGGACGCGCTCGCGTTCAG
CGGCCCAGCGCCCGAGCGCATCAACGGCCGGCTCGCTATGGTGGGCTTCGTGGCGGCGCTCTCCGTCGAGGCAGCGCGCG
GCGGCGGGCTACTCGACCAGGCCGGCAGCGGCGCCGGGCTGGGATGGTTCCTGACAACCGCTGCGGTGTTCTCGGTGGCG
TCGCTGGTGCCGCTCCTTCAGGGCCAGAGCGTGGAGAGCAAGTCCAGCGGCGTATGGAGCGCCGACGCCGAGCTATGGAA
CGGCCGCTTCGCCATGCTCGGCCTCGTCGCACTCGCCATCACCGAGTTCATCACCGGCACGCCTTTCGTCAACGTCTGAA
ACTAGTTAGTGTAGTGCAGTACGCTTGCACGTGCATGTACATATTTGTTGGTCATGCTGAGGAACTAGG---ACTACGGA
CCACGCGACAAGCGTGGTAAAAGCAATCTCAAATTGACAAAAAAAAACTAGGACTACGGACTCTGACATTCTGTAAGCCG
TATCATTAGGTTGTCTTTC-TTGGTGATGATGTCTTGGAGCCTACAATTAATGCAGGAGTGAATTGCGTCCATGCTAATA
CTCCCATTCTACCAAGACGCTTGCGTATTTTAAGATTCAATTTTGATCATCAATTAGACGAGCAATA-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------TATAAATTTTGGGACTTCAAATTTATACCATCAAAAA
GTTATTCAAATACGAATTCAACGGTATAACTTTTGTCTACATAACCCACATTTTCTTGGTCAAACCGACGGTTGAACTTA
--------------------------------------------------------------------------------
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----------------------------
>chr4D_703
--------------------------------------------------------------------------------
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-------TGGAGTTCACTTGTGCCACCTTTCTTCTGGCACGTTTTGGCGAGCTCCGGACTCCGGAGGCC-CTCTGCATGG
TGCCCTGGACGTCCACGTTGTGACCCCGCTCTCGCTGCACGCACAACTTCTACACGTTCGCGGCTGGGGAGTGCCCGCCG
ACGTGGCCACCGCCGCAGCCACCTCCTCACGGCCGAGCTAGCTCGTCCTCCCCGCGTCCTATAT-AAACGCGCACTCGTC
ATCGGCAACAGCACACAGAAACAAC-------AGCCC-ACAACGAACCAAGTGTGATCTAGCCAGTCCCTGCTTCCTGCT
GTGAGTAATGGCGACCATGGTGGCCTTGAGCTCCTTCGCTGGTGCCGCCGTCGTCGGCCGCTCCGCCTCCTGGTCTCCGG
CGGTG---CCGCGCCGGCGCGCCCTCCTCGTCAGGGCCCAGATCGAGGTAAGCCTCTTTTCGTCGCCTGACTCTGCCATC
ATATCTTGTTTACTCCGTATACTCTACGTATAAGTCAAGTTTCGAGTGTGCTGTGCTGACTCACGATGCCCT----CTGC
AGCCGGGTGTCGAGCCGACCAAGGAGGAGACGACGAGCGCATCGACATCCTCCCCGAGCCCAACCCC------AAGCCCG
AGCACGACCCCGGTGGCGCCCAAGCCCAAGGCC---AAG------GCTAACCCCTCGGTCTGGGACGCGCTCGCGTTCAG
CGGCCCGGCGCCGGAGCGCATCAACGGCCGGCTCGCTATGGTGGGCTTCGTGGCGGCGCTCTCCGTCGAGGCCGCGCGCG
GCGGCGGGCTGCTCGACCAGGCCGGCAGCGGCGCCGGGCTGGGATGGTTCCTGACAACCGCGGCTGTGTTCTCCGTGGCG
TCTCTGGTGCCGCTGCTTCAGGGGCAGAGTGTGGAGAGCAAGTCCAGCGGCGTATGGACCGCCGACGCCGAGCTGTGGAA
CGGCCGCTTCGCCATGCTCGGCCTCGTCGCACTCGCCGTCACCGAGTTCATCACCGGCACGCCCTTCGTCAACGTCTGAA
ACTAGCTAGTGTGTACTAGTACTCCTGTACGTGCGTGTACATA-TTGTTGGTCATGCTGAGGAACTAGT---GGTACGGA
C------------------------------------------------------------TCTG---------------
--------------------------------------------------------------------------------
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>chr4A_703
--------------------------------------------------------------------------------
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-------TGGAGTTCACTTGTGCCACCTTTCTTCTGGCACGTTTTGGCGAG-------CTCCGGAGGCC-CTCTGCATGG
TGCCCGGGACGTCCACGTCGTGCCCCGGCTCTCGCTGCACGCGCAACTTCTACACGTTCGCGGCTGAGGAGTGCCCGCCG
ACGTGGCCACCGCCGCAGCCACCTCCTCACGGCCGGGCTAGCTCGTCCTCCCCGCGTCCTACAT-AAACGCACACTCGTC
ATCGGCAACAGCACACAGAATCAAC-------AGCCC-ACAACGAACCAAGTGTGATCTAGCCACTCCCTGCTTCCTGCT
GTGAGTAATGGCGACCATGGTGGCCTTGAGCTCCTTCGCCGGTGCCGCCGTCGTCGGCCGCTCCGCCTCCTGGTCTCCGG
CGGTG---CCGCGCCGGCGCGCTCTCCTCGTCAGGGCCCAGACCGAGGTAAGCCTCTTTCG-------------------
--------TTTACTCCGT--ACTGTACGTACAACTCAAGTTTA-AGTGTGCTCTGCTGACTCACGATGCCCTGTCCCTGC
AGCCGGATGTCGAGCCGACCAAGGAGACGATGACGAGCGCATCGACATCCTCCCCCAGCCCCACCCC------AAGCCCG
AGCCCGACCCCGGTGGCGCCCAAGCCCAAGGCC---AAG------GCTAACCCCTCGGTCTGGGACGCGCTCGCGTTCAG
CGGCCCGGCGCCGGAGCGCATCAACGGCCGGCTCGCCATGGTGGGCTTCGTGGCGGCACTCTCCGTCGAGGCGGCGCGCG
GCGGCGGGCTACTCGACCAGGTCGGCAGCGGCGCCGGGCTGGGATGGTTCCTGACAACCGCGGCTGTGTTCTCCGTGGCA
TCTCTGGTGCCGCTGCTTCAGGGACAGAGCGTGGAGAGCAAGTCCAGCGGCGTATGGACCGCCGACGCCGAGCTATGGAA
CGGCCGCTTCGCCATGCTCGGCCTCGTCGCACTCGCCGTCACCGAGTTCATCACCGGCACGCCCTTCGTCAACGTCTGAA
ACTAG---------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------
>chr4B_704
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------GGAGTTCACTTGTGCCACCTTTCTTCTGGCACGTTTTGGCGAGCTCCGGA--------GG--CTCTGCATGG
TGCCCTGGACGTCCACGTCGTGACCCGCCTCTCGCTGCACGCACAACTTCAACACGTTCACGGCTGGCGAGTGCCCGCCG
ACGTGGCCACCGCCGCGGCCACCCCCTCACGGCCGGGCTACCTCGTCTTCCCCGCGTCCTACAT-AAACGCACGCTCGTC
ATCGGCAACAGCACACAGAATCAAC-------AGCCCAACAACGAACCAAGTGTGATCTAGCCAGTCCCTGCTTCCTGCT
GTGAGTAATGGCGACCATGTTGGCCTTGAGCCCCTTCACTGGTGCCGCTGTCGTCGGCCGCTCCGCCTCCTGGTCTCCGG
CGGTG---CCGCGCCGGCGTGCCCTCCTCGTCAGGGCCCAGACCGAGGTAAGCCTCTTTCG-------------------
--------TTTACTCCGT--ACTGCACGTACAACTCAAGTTTA-AGTGTGCTCTGCTGACTCACGATGCCTTGCCCCTGC
AGCCGGATGCCGAGCCAACCAAGGAGACGACGACGAGCGCATCGACATCCTCCCCTAGCCCAACCCC------AAGCCCG
AGCACGACCCTGGTTGCGCCCAAGCCCAAGTCCAAGGCTGCTAACGCTAACCCCTCGGTCTGGGACGCGCTCGCGTTCAG
CGGCCCGGCACCGGAGCGCATCAACGGACGGCTCGCTATGGTGGGCTTCGTGGCGGCGCTCTCTGTTGAGGCGGCGCGCG
GCGGCGGGCTACTCGACCAGGCCGGCAGCGGCGCCGGGCTGGGATGGTTCCTGACAACCGCGGCTGTGTTTTCCGTGGCG
TCTCTGGTACCGCTGCTTCAGGGACAGAGTGTGGAGAGCAAGTCCAGCGGCGTATGGACCGCCGACGCCGAGCTATGGAA
CGGCCGCTTCGCCATGCTCGGCCTCGTCGCACTGGCCGTCACCGAGTTCATCACCGGCACGTCCTTCGTCAACGTCTGAA
ACTAGCTAGTGTAGCAC-----TCCCGTACGTGCGTGTACATA-TTGTTGGTCATGCTGAGGAACTAGT---GGTACGGA
C------------------------------------------------------------TCTG---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------------------
>chr1D_995
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-TGAGTAATGGCGACCATGGTGGCTTTGAGTTCCTTCGCCG---------TCGTCGGCCGGTCCGCCGCCCGCTCTCCAG
TGGCGGCCCCGCGCCGGAGGACCCTCGTCGTCAGGGCCCAGACCGAGGTGAGCTTTCACGTCACGCACTTGACTGCATCG
CATGTTGGCTAGTTCGAGACTCGACCTCAACGTGAGATTCTTTATG-----------------------CAT----GTGC
AGCCTGGCATGGACTCAACCA---AGGAGACAACGAGCGCATCGACCTCCTCCTCCCCGAGCACGAGCCCGAC---CCCG
ACCCCGATCCCGGCGGCACCCAAGCCCATGGCCAAGAAG------GCTAACCCCTCGGTCTGGGACGCGCTCGCCTTCAG
CGGCCCGGCGCCGGAGCGAATCAACGGCCGGCTGGCCATGGTGGGATTCATGGCGGCGCTCTCCGTCGAGGCGGCGCGCG
GCGGCGGGCTCCTCGACCAGGCCGGCAGCGGCGCCGGGCTGGGCTGGTTCCTGGTGACCGCGGGGGTGTTCTCCGTGGCA
TCGTTGGTGCCGCTGCTGCAGGGCCAGAGCGTGGAGAGCAAGTCCAGTGGCTTCTGGAGCGCGGACGCCGAGCTCTGGAA
CGGCCGCTTCGCCATGCTCGGCCTCGTCGCGCTCGCCGCCACCGAGTTCATTACCGGCGCTCCCTTCGTCAACATCTAAG
ACTA----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------
>chr1D_995
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-TGAGTAATGGCGACCATGGTGGCTTTGAGTTCCTTCGCCG---------TCGTCGGCCGGTCCGCCGCCCGCTCTCCAG
TGGCGGCCCCGCGCCGGAGGACCCTCGTCGTCAGGGCCCAGACCGAGGTGAGCTTTCACGTCACGCACTTGACTGCATCG
CATGTTGGCTAGTTCGAGACTCGACCTCAACGTGAGATTCTTTATG-----------------------CAT----GTGC
AGCCTGGCATGGACTCAACCA---AGGAGACAACGAGCGCATCGACCTCCTCCTCCCCGAGCACGAGCCCGAC---CCCG
ACCCCGATCCCGGCGGCACCCAAGCCCATGGCCAAGAAG------GCTAACCCCTCGGTCTGGGACGCGCTCGCCTTCAG
CGGCCCGGCGCCGGAGCGAATCAACGGCCGGCTGGCCATGGTGGGATTCATGGCGGCGCTCTCCGTCGAGGCGGCGCGCG
GCGGCGGGCTCCTCGACCAGGCCGGCAGCGGCGCCGGGCTGGGCTGGTTCCTGGTGACCGCGGGGGTGTTCTCCGTGGCA
TCGTTGGTGCCGCTGCTGCAGGGCCAGAGCGTGGAGAGCAAGTCCAGTGGCTTCTGGAGCGCGGACGCCGAGCTCTGGAA
CGGCCGCTTCGCCATGCTTGGCCTCGTCGCGCTGGCCGCCACCGAGTTCATTACCGGCGCGCCCTTCGTCAACATCTAAG
ACGACGTAGTGTAGCGC-----TGT-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------
>SNPs
----------------------------S---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------S----------------------------------SS----------------S------------------
--------------------------------------------------------------------------------
-----S-------------------S------------------------------------------------------
----------S---------------------------------------------------------------------
--------SS-S-SSS---------------------------------------S------------------------
---------S------------------SS--------------------------------------------------
------------------------------------------------------------------------S-------
----------S-----------S----------------S------S-----------------------------S---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------S---------------
------------S---S------------------------------------------------------------S--
--------------------------------------------------S------------------------S----
----------------------------S----------------------------------------------S---S
-------SS-----------------------------------------------------------------------
--------------------------------------------------------------------------------
------S---------------------S---------------------------------------------------
--------------------------------------------------------------S-----------------
--------------------------------------------------------------------------------
-------------------------------------------------------------S-------SSS--------
--------------------------------------------------------------------------------
-------------------S-----S--------S-------------------------------S----------S--
------------------------S-S----------S-S----------------------S----SSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------------------------
-----------------------S------------------------------------S-------S---SS------
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_249
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------GCATTGGGAGC
GTGTATGTC-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------
>reverse_1831
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------GCACTACGGA
CTCTGACGTT----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------
