>input_sequence_72296
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-------------------------------------------ACAC--CCAGATAATCAACTGCCCCCCCACACACGCA
CACATCAAGC-GCAGCTGACCCACCAGTCGATCGATCCGGCAGCTAGCTAGCCATGGCCATGGCCGGGAGGAAGGTGACG
ACGAGCAACGCCGGCGTCGCGGCCGCGCTGGTGGCGCTGCTGGTCGTGGCGGCGGCGTCGGGCGCGGCCGGGTACCATGT
CTGCAACGTGGACACGGACAGCCTGGTGAACAACTGCAGGTCCTACTGCGCGGTGGGCAGCAACGAGGCCAGCCCCAGCG
GCGCGTGCTGCGGCGCGGTGCGCGGCGCCAACTTCAAGTGCCTCTGCAAGTACAAGGGCCTGCTGCCCAAGGGCATCGAC
GCCAACCGCGCCATGCAGATCCCCGCCAAGTGCGGCTACGGGGCGGCCTCCTGCTAGTCACG------CACTAT--CCAG
CTCGATTCACGCCGGCCGACGCGGTCCGCCGCCGGTCGCCGGTTGCACGAGTAAATCGTAACGTCGTATTTCGATGTCAA
CTTTCACTCGTTCGTAGGAGT--ACGTACGTTCTGGTCGGCTCGCTGATCCGAT--------------CGTACGTGCGTG
CTTTGTGTTGGCCATGCATGC---TACTCCTACCTTTGTATCCTCTTCCGCTTTTCGTAAGTCATGTTGCTGTGTGTCCA
CAACGATGTGGCAGAAATAAA-----------------------------------------------------------
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-----------------------------------------------------------------------------
>chr3D_1_TraesCS3D01G415400
CGTCAGAGCAGGGCTTAAATAACCGCGACTTAGGCCATGCGAAGGGTCGGTTAGCCGTTTTAATGCGGCGTAGCGGCCGG
AGTTGGTTCCTCGGGAAGGTGCGTCCGCATTGAAGCGGCGGCTCCTGAGTGGTTGCGTAGTATTATGTTACCATCACATA
ACGCTTCTCAAGAAAAGTTGAGTCTACAAACTAATAGGTGCAACCATATATGATACTTACCTACATAA------------
----------------------------------------------------------GTAAACTTGTCTTGGGATGTGT
TAGACTAGTCATAGTGGAGCGTAATTTACACTAGTGTCATGCATATGACACTAGTCTATGTTACTGTCTTTATGTGGATA
ATGAGATTGGGAGATAATTGCTATCTTGTTACACAGAAGAAAATTG-GATTCAAATTTGATATTTTTCGAACTTGCACCT
GTCCTTTTTCCTAAAGAAACATCGGTGGTTCTTCTCTTTTGCTCTCTTTCCTCGTTTGTTCCTCGGTTTGCTCCGGTACT
GGTCAA-CGTCTATGGCATGACCTCACCTCCATGAATCTCTCCCATCGTCACTTTGGTTCTTTCCGGGACAATAAAAGAC
CTCCACCACGTCAGACAACCTACGTACCTCTTGTAGAAACATTGTTCAACACGGCTCTTGCTTGGAGACATGACGAGAAC
CTCAAAATAGTATTCCTCCAAAAGTTGGTTGATTAGGTA-----GCGGTCTCAATCTTCTTCAAGTGTCACTAGCTAGTG
GAGCACTTGTCCAACTAGTAGTGGCTGCTGTCTGCCGCCTCTTTCTCCTCTAATTCTC--TACACCGCTTTCACAGTCAA
CGGTCTCATGCCAGTCCCTTGTTCAAACAATCATATGCACACTGTTAG---TACTTCTCAAACAAGAAAAAACAAAGACT
TACTTGTCTCTCCATTGATAGCATCTTCTAGGAAATTACATGAGCGACGCGGCCAAATGCACGTCGTCGCGGGCCACGCT
ACCCCCACGCTATATAAGCCCTAGCAA-TGGCCCAAACGTGACACAC--CCAGATAATCAACTGCCCCCCCACACACGCA
CACATCAAGC-GCAGCTGACCCACCAGTCGATCGATCCGGCAGCTAGCTAGCCATGGCCATGGCCGGGAGGAAGGTGACG
ACGAGCAACGCCGGCGTCGCGGCCGCGCTGGTGGCGCTGCTGGTCGTGGCGGCGGCGTCGGGCGCGGCCGGGTACCATGT
CTGCAACGTGGACACGGACAGCCTGGTGAACAACTGCAGGTCCTACTGCGCGGTGGGCAGCAACGAGGCCAGCCCCAGCG
GCGCGTGCTGCGGCGCGGTGCGCGGCGCCAACTTCAAGTGCCTCTGCAAGTACAAGGGCCTGCTGCCCAAGGGCATCGAC
GCCAACCGCGCCATGCAGATCCCCGCCAAGTGCGGCTACGGGGCGGCCTCCTGCTAGTCACG------CACTAT--CCAG
CTCGATTCACGCCGGCCGACGCGGTCCGCCGCCGGTCGCCGGTTGCACGAGTAAATCGTAACGTCGTATTTCGATGTCAA
CTTTCACTCGTTCGTAGGAGT--ACGTACGTTCTGGTCGGCTCGCTGATCCGAT--------------CGTACGTGCGTG
CTTTGTGTTGGCCATGCATGC---TACTCCTACCTTTGTATCCTCTTCCGCTTTTCGTAAGTCATGTTGCTGTGTGTCCA
CAACGATGTGGCAGAAATAAAACTTATTTCCCGCG-------------------TCTTTCTCTATATGTTAGATTTTTTT
GATCATCTATTAATAATGCCAATAAGTTATATGAAACTCGAAAAAAAAATGAAACA---CATTTCTAAACCTTTGGGTCA
ACACTACAAACGATCATAAGGCAGAGGTGCCTCTGGGAGAGTCTTCGCAAAATGTATTTTT--TTTAGAAAGTTACATAT
AATGATATCACTAGTTAAGGAACACCCCTTCTCAACAATGAAATCCACGAAACCACCACAAT-GTGACGTCAATAACAAA
AAAAACCCACCACTTTCGTTTTATTAGCAAGATGCACCAAAGGCAGTTA-ATCTTTGACAAAAAAAACACTAAATGCCCC
TTGACCCAGGTTGTGATGTGACAAATGGCAGACGTTGCGAAGAGCAGACGATATTGGGTGATGGTCGTTAACTGACAAAG
CGTTAAGATACCAG-AGGGCCCACCCGTCAGTATGTTCCCTACTATGCGCCATT--------------------------
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---TCGAACATCTCGAATCATGCGCCACTTCTGTTATCTACTATGTTGTGTTCTGCCCCAAGAAGAGATTTAGATTTGAG
CTATTCTAGACCAAGTTGGACGGGGTCCTGGATGTGGTGTGTGATGCTTGGGTGTGTGATGAAGGCATTGTTGATCCCTT
CAAGCGCCTAGATGCCTTGCTCCGGAACACAACTCATGTTTTACAAGCTTGGTGTGATGGTGTCAAAGGAAGGTGGGCAA
CATCAAAATACAGACGGCGGTAGCTAACTATGTCATTCTCCGTCCCGATCGAGCTCAAGAGCATAGACTCATCACTGCCG
AGGAGCTTTGGCTAAGGAGAACTCTGAAGTTAGCCCTGTTGGGTCTCGCTTCCCTTGAACGTACCATTGAGAGACATAGA
TCATGATTAAGGTGGCTAAAGGAGGGAGATG-------------------------------------------------
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-----------------------------------------------------------------------CTAACACCA
AGCTCTTTCAGCTTGTGGCGAATGGTAAGTGCACAAAGAATTTGATCCCTCACATCAAGATCGGAGATGAATTAATC
>chr3B_1
CGTCAGAGCAGGGCTTAAATAACCACGACTTAGGCCATGCGAAGGGCCGGTTAGCCGTTTTAATGCGGCGTAGCAGCCGG
AGTTGGTTCCTCGGGAAGCTGCGTCCGCATTGAAGCGGCGGCTCCTGAGTCGTTGTGTAGTATTATGTTACCATCACATA
ACGCTTCTCAAGAAAAGTTGAGTCTACAAGCTAATAGATGCAACCATATATGGTACTTACCTATATGACACTTTGTACTA
TGAAGATGGTAACATAGACTCCAAACACATCTCTCCCCATTAACTAGCTGCCATATAGGTAAACTTGTCTTGGGATGTGT
TAGGCTAGTCATAGTGGGGAGTAACTTACACTAGTGTCATGCATATGACACTACTCTATATTACTATTTTTATGTGGATA
ACGAG---------TAATTGCTATCTTGTTACACAGATGAAACTTTTGATTCAAATTTGATATTTTTCGAACTTTCACCT
GTCCTTTTTCCTAAAGAAACATCGGTGGTTCTTCTCTTTTGCTCTCTTTCCTCGTCTGTTCCTCGGTTTGCTCCGGTACG
GGTCAA-TGTCTATGTCATGACCTCACCTTCAGGAATCTCTCCCATCGTCACTTTGGTTCTTTCCGGGACAA---AAGAT
CTCCACCACGTCAGACAACC----TACCTCTTGTAGAAACATTGTTCAACACGGTTCTTGCTTGGAGACATGACGAGAAC
CTCAAAATAGTAGTCCTCCAAAAGTTGGTTGATTACTGCTGGTGGCGGTCTCAATCTTCTTCAAGTGTCACTAGCTAGTG
GAGCACTTGTCCAACTAGTAGTGGCTGCTGTCTGCCGCCTCTT-CTCCTCTAATTGTC--TGCACCGCTTTCACAGTCAA
CGGTCTCATGCCAGTCCCTTGTTGAGACAATCATATGCACACTGTTAG---TACTTCTCAAACAAGAAAAAACAAAGAAT
TACTCGTCTCTCCATTGATAGCATCTTCTAGGAAATTACATGAGCGACGCGGCCAAATGCACGTCGTCGCGGGCC-----
------ACGCTATATAAGCCCTAGCCA-TCACCCAAACGTGACACAC--CAAGACAACCAACTG-CCCCACACACACGCA
CACATCAAGC-GCAGCGCAGC------TCGATCGATCCGGCAGCTAGGTAGCTATGGCC---G---GGAGGAAGGTG---
ATGAGCAACGCCGGCGTCGCGGCCGCGCTGGTGGCGCTGCTGGTCGTGGCGGCGGCGTCGGGCGCGGCCGGGATTCATGT
CTGCAACGTGGACACCGGGAGCATGGTGAACAACTGCAGGTCCTACTGCACGGTGGGCAGCAACGAGGCCAGTCCCAGCG
GCGCGTGCTGCGGCGCGGTGCGCGGCGCCAACTTCAAGTGCCTCTGCAAGTACAAGGGCCTGCTGTCTAAGGACATCGAC
GCCAACCGCGTCATGCAGATCCCAGCCAAGTGCGGCTACGGGGCGGCCTCCTGCTAGTCACG------CATTAT--GCAG
CTCGATTCGCGCCGGCCGACGCGGTCCGCCGCCGGTCGCCGGTTGCACGAGTAAATCGTAACGTCGTATTTTGATGTCAA
CTTTCACTCGTTCGTAGGAGT--ACGTACGTTCTGGTCGGCTCGCTGATCCTAT--------------CGTGCGTGCGTG
CTTTGTGTTGGCCATGCATGC---TAC------CTTTGTATCCTCTTCCGCTTTTCGTAAGTCATGTTGCTGTGTGTCCA
CAACTATGTGGCAGAAATAAAACTTGTTTCCCGCG-------------------TCTCTCTATATAG------ATTTTTT
TATCATCTATTAATAATGCCAATAAGTTATA-------------------------------------------------
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>chr3A_320
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---------------------------------------------------------------------TTATGTGGATA
ATGAGATTGGGAGATAATTGCTATCTTGTTACACAGACGAAACTTTTGATTCAAATTTGATATTTTTCAAACTTGCACCT
GTCCTTTTTCCTAAAGAAACACCGATGGTTCTTCTCTTTTGCTCTCTTTCCTCGTTTGTTCCTCGGTTTGCTCCGGTACT
GGTCAAACGTCTATGGCATTACCTCACCTTCATGAATCTCTCCCATCGTCACTTTGGTTCTTCCCGGGACAA---AAGAC
CTCCACCACGTCAGTCAACC----TAACTTTTGTAGAAATATTGTTCAACACGGCTCTTGCTTGGAGACATGACGAGAAC
CTCAAAATAGTATTCCTCCAAAAGTTGGTTGATTAGGTA-----GCGGTCTCAGTCTTCTTCAAGTGTCACTAGCTAGTG
GAGCACTTGTCCAACCAGGAGTGGCTGCTGTCTGCCGCCTCTTTCTCCTCTACTAATTCTTACACCGCTTTCACAGTCAA
TGGTCTCATGCCAGTCCCCTGTTCAGACAATCATATGCACACTACTACTCCTACTTCTCAAACACGAAAAAACAAAGAAT
TACTCGTCTCTCCATTGGTACCATCTTCTAGGAAATTACATGAGCGACGCGGCCAAACGCACCTCGTCGCGGGCCACGCT
ACCCCCACGCTATATAAGCCCTAGCCA-TCGCCCAAACGTGACACACACCCAGACAATCAACGG-CCCCCCACGCACGCA
CACATCAAGC-GCAGCTGATCCCCCAGTTGATCGATCCGTCAGCTAGCTAGCCATGGCCATGGCCGGGAGGAAGGTGACG
ACGAGCAGCGCCAGCGTCGCCGCAGCGCTGGTGGCGCTGCTGGTCGTGGCGGCGGCGTCGGGCGCGGCCGGGATTCATGT
GTGCAACGTGGACACGGGGAGCATGCTGAACAACTGCAGGTCCTACTGCTCGGTGGGCAGCAACGAGGCCAGCCCCAGCG
GCGCGTGCTGCGGCGCGGTGCGCGGCGCCAACTTCAAGTGCCTCTGCAAGTACAAGGGCTTCCTGCCCAAGGACATCGAC
GCCAACCGCGCCATGCAGATCCCCGCCAAGTGCGGCTACGGGCCGGCCTCCTGCTAGTCACC------CACTACCAACAG
C---------------------------------------------------------------------TTGCTACCAA
CTTTCACTCGTTCGTAGGAGTGTACGTACGTAGGTTGATCTGAT-------------------------GTGCGTGCATG
CTTTGTGTTGGCCATGCATGCTA------CTACCTTTGTATCCTCTTCCGCTTTTCCTAAGTCATGTTGCTGTGTGTCCA
CAACTATGTGGCAGAAATAAAACTTATTTCCCGCG-------------------TCTTTCTCTATATGTTAGATTTTTTT
GGTCATCTATTAATAATGCCAATAAGTTCTATGAAACTTTAAAAAATATTCCAAAAAACCATTTCTAAACATTTGGGTCA
ACACTACAAACGATCATAGGTCAGAGGTGCCT--GCAAGAGTCTTCGCAAAATGTAAACAAAATTTAGAAAGTTATATAT
AGCGATATCACTAGTTAAGGAATGCCCCTTGTGAAGAGTGAAATCCACAAAACCATCACAATTGTGACATCAATAACAAA
AAACCACCACT--TTACGTTTTATTAGCAAGATGCACCAAATGCAATGTTATCTTTGAC-AAAAGAACACTAAATGCCCC
TTGACCCAGGTATTGATGTGGCAAATGACAGACGTTGCAAAGAGCAGGC---ATGGGGTGATGATCGTTAACTAGCAAGG
CGTTAAGATGACCA------------------------------------------------------------------
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-----------------------------------------------------------------------------
>chr3D_921
AGCGA---------------------------------------------------------------------------
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------------------------------------------------GCGGCCACATGCGCGTCGTCACGGGCCACGGC
ATCCCCACGCTATATAAGCCCTAGCCAATCGCCCAAACGTGACACAC--CCAGACAATCAAGTG-CTACACACACACACA
CATTCAT--------------CACCAGTCGATCGATCCGACAGCTAGCTAGCCATGGCC---GCCGGGAGGAAGGTGACG
ATGAGCAGCGCCGGCGTGGCCGCCGCGCTGGTGGCGCTGCTGGTCGTGGCGGCGGCGTCGGGCGCGACCGGGTACCATGT
CTGCAACGTGGACACGGACAGCCTGGTCAACAACTGCAAGTCCTACTGCACGGCGGGCAGCTCGGAGGCCAGTCCCAGCG
GCGCGTGCTGCGGCGCGGTGCGCGGCGGTGACTTCCACTGCCTCTGCCAGTACAAGGGCGTGCTGCCCAAGAACATCGAC
GCCAACCGCGCCATGCAGATCCCCGGCAAGTGCGGCTACGGGGCGGTCTCCTGCTAGTCA--GTCACGCACTACCAGCAG
CTCGATTGG--------------------CGCCGGTCGCCGGTTGCACTAGTAGATCGTACGTAAGG-------TGTTAA
CTTTCACTCGTTCGTAGGAGT--AA----GTTCTGGTCGGCTGGCTGATCCGAT--------------------------
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>chr3B_921
AGCGC---------------------------------------------------------------------------
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------------------------------------------------GCGGCCACATGCACGTCGTCACGGGCGACGGT
ATCCCCACGCTATATAAACACTAGCCA-TCGCCCAA-CGTGACACAC--CCAGACAACCGACTG-CCCCCAACACACGCA
CACATCAAGC-GCAGCTGATCCACCAGTCGATCGATCCGACAGCTAGCTAGCCATGGCC---GCCGGGAGGAGGGT---G
ATGAGCAACGCCGGCGTCGCTGCCGCGCTGGTGGCGCTGCTGGTCGTGGCGGCGGCGGCGGGCGCGGCCGGGTACCATGT
CTGCGACGTGGACACGGACAGCATGGTGAGCAACTGCAGGTCCTACTGCACGGTGGGCAGCACGGAGGCCAGTCCCAGCG
GCGCGTGCTGCGGCGCGGTGCACGGCGGCGACTTCCACTGCCTCTGCAAGTACAAGGACGTGCTGCCCAAGAACATCGAC
GCGAACCGCGCCATGCAGATCCCCGGCAAGTGCGGCTACGGGGCGACCTCCTGCTAGTCA--GTCACGCACTACCAGCAG
CTCGATTGGCGCCGGCCGACGCGGTCCGCCGGC---CGCCGGTTGCACTAGTAGATCCTACGTAAGG-------TGTTAA
CTTTCACTCGTTCGTAGGAGT--AAA---GTTCTGGTCGTCTGGCCGATCCGATCGTGCTCCTGCGTGC----GTGCACG
CTTTGTGTTGGCGATGCATGC---TAC------CTTTGTATCCTCTTCTGCTTTTCGTAAGTCATGTCGCTGTGTGTCTA
CAACCATGTCGCAGAAATAAAACTTGTTTCCCGTGTTAGCTATCTTCTAGTCTTTCTCTCTATATTG------TTTTTTT
CATCATCTAGTAATAATACCAACAAGCTCTGTGAAACTTCTAAAAAAAA-------------------------------
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>chr3A_921
AGCGC---------------------------------------------------------------------------
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------------------------------------------------GCGGCCACATGCGCGTCGTCACGGGCCACGGT
ATCCCCACGCTATATAAGCGCTAGCCA-TCGCCCAC-CGTGACACAC--CCAGACAACCGACTG-CCCCCCACACACGCA
CACATCAAGCAGCAGCTGATCCACCAGTCGATCGATCCGACAGCTAGCTAGCCATGGCC---GCCGGGAGGAAGGTGACG
ATGAGCAGCGCCGGCGTGGCCGCCGCGCTGGTGGCGCTGCTGGTCGTGGCGGCGGCGTCGGGCGCGGCCGGGCTCAGGGT
CTGCAGCGTGGACAGGGACAGCGTCGTCAACAACTGCAAGTCCTACTGCACGGTGGGCAGCACGGAGGCCAGCCCCAGCG
GCGCGTGCTGCAACGCGGTGCGCGGCGGCAACTTCAAGTGCCTCTGCCAGTTCAGGAACGCGCTGTCCCCGGACATCGAC
GGCAACCGCGCCATGCAGATCCCCGCCAAGTGCGGCTACGGGGCGGCCTCCTGCTAGTCACCGTCACGCACTAT--GCAG
CCCGATACGCGCCGGCCGCCGCGGTCCGCCGCCGGTCGCCGGTTGCACCAGTAGATCGTAACGTGGTGTTTTGCTGTCAA
CTTTCAGTCGTTCGTAGGAGT--ACGTACGTTCTGGTCGGCTGGCTGATCCGAACGCGCTCCTGCGTGCGTGCATGCATG
CTTTGTGTTGGCCATGCATGCTAGTAC------CTTTGTATCCTCTTCTGCTTTTCGTAAGTGATGTTGCTGTGTGTCTA
CAACCATGTCGCAGAAATAAA-CTTGTTTCCCG-----------------------------------------------
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>chr3B_1776
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----------------------------------------------------------------------CTCTGGGTCA
GCACTACAAACGATGATAAGGCAGAGGTGCCT--GGGAGAGTCTTCACAAAATGTATTT----TTTTAAAAGTTACATAT
AATGATATCACTAGTTAAGGAACACCCCTTCTCAACAGTGAAATCCATGAAACCACCACAATTGTA--------------
-------CACCACTTTCGTTTTATTAGCAAGATACACCAAACGCAGTTA-ATCTTTGAC-AAAA-AACACTAAATGCCCA
TTGACCTAGGTTGTGACATGGCAAATGGCACACATTGCAAAGAGCAGACGATATTGGGTGATGGTCGTTAACTGACAAAG
CGTTAAGATGACTAAAGGGCTCACCCGTCAGTATGTTCCCACACCGTCACCGAGTACGAACTAGGGTTGGAGTGCTGAAC
CACCCGACCACAGATGAGATGTAGTGGTGAGTTTGGTAAGGAGATGCCAGCTAGGAGTGAACTTGTGGCGGAGTCGTCCC
CGGTGATCATGGCGCATTGAGCGCTTTTGTGGTGGCGGGAGTTTTTGATCGTCTTCATGGAACTAAACCTGCAAGTGCAA
TGCTGGAACGTTTGTGGCTTGAACAATCCAGCTAAAAGAAAGGCGGTGAGGGAGTTTGTGAACTCGGCAAGAGCAAACAT
GGCGTATTTGCAAGAGACCAAATTAGATGCAATTGATCGCTTTTGTGTTATGTAATGTCCGGGGCTGTCATTTGACGGCT
TTGCTTATTTGCCGGCGTCTGACACTCGAGGTGGTGTTCTTCTTGCTTGGTATAATATGGTCATGGATGTGGACAACATC
TCCCTTGATACCATTTTCCTTACAGGTCTGGTCCATAACAAGGATGGAGCACATTGGTGGATCTCGGTTGTGTATGGTCC
CCAAGGATATGAGCTCAAGACCACATTTTTGGAGGGGTTGAAATCTAGAAGGGAGGTATGTCAGGGCCCATGGATGGTTC
TTGGGGATTTCAACATGATCCTTAGAGTTTCGGAGAAGAACAATACCAACTTCGAACCGGGGTATAATGCGTAAACTTAT
GGATTTCGTCGATGAGCATGAGATCAAAGAGCTTTACATGCACGGCAAAAACTACACCTAGAGGAATGAGCATGACGAGC
TGGTCATGACCAAAATCAATAGGGTGCTGGTTTTGGTTAATTGGGAACTACACTTTGCTGACTGTTTGCTCCAAGCCCTA
TCGTCGAACGTCTCGGATCATGCGCCGCTTCTATTATCTACTATGTTCCGTTCTGCCCCAAGAAGAGATTTAGGTTTGAG
TTGTTCTGGACCAAGTTGGATGGGTTCCTGGATGTGGTGTGTGATTCTTGGGTGTGTGATGAAGGCATTGTTGATCCCTT
CAAGCGCCTAGATGCCTTGCTCTGGAACACATCTCATGTTTTACAAGCT--------TGGCGTCAAAGGAAGGTGGGCAA
CATCAAAA-ACAGATGGCAGTTGCTAACTATGTCATTCTATGTCTCGATCGATATCAAGAGCAAAGACTCGTCACTGCCG
AGGAGCTTTGGTTAAGGAGAACTCTGAAGTTGGCCCTGTTGGGTCTCGCTTCCCTTGAACGTACCATTGAGAGACATAGA
TCGCGATTAAGGTGGCTCAAGCAGGGAGATGCTAACTATTGGGGAACATTGCATGGAAAAATTCTATGCACACGCAAGAT
CTATTCATGGAGATGCGTAGCTACGAGAGAGGAGAGCATCTTCATACCCTTGAAGATTGCTAAGCGGAAGCGTTTATCAA
CGCGGTTGATGTAGTCGTACACCTTCACGATCCATCCCGATCAAGTACCAAACGCACGACACCACCACGTCCAGCACAAG
TTCAGCTCGATGACATCCTCGCCTTCTTGATGCAGCAAGAGGGGCGAAGTAGTAGATGAGTTCTGATAGCAAGACGGCGT
GGTGATGGTGTTGGTGAAGAACAATCTCCGCAGGGCTTCGCCAAGCACAATGGAAACTATGACAGATGATAAACTAGAGG
GTCGGGGTTGCTGGCACACGGCTTGGTGTATCTTTATGTGTTCCAGGTGCTAGCCCTGCCCTTCTATTGATATGTTGAGC
CCTGGGGTAGAAACTTGGAGGGAAAGCCTCCTCAAAGTCGGTTTTGCCCGCAAGGCAAGAGTCGTACCCGGACTCCAAGA
CCAAACGCCAGGGTCCTTAGCATCTGGCCCCAGATGCCAGTGTCCCTCGCGTATGGCCCCTGGCCTCCGCAAAACTTCCT
TTTGTACTTTCCAAAAGCCTCATGGGCTTTACCGCTTAGCCCAAACAAAGTGTTCTCGTACCCAAACATTTCAGGAAACA
TCTGAAACCCCTTCCGATGAATTCCGGAACCCTTCCGGAGACTAAACACTATTTACACATTTATCAATCTTTACCTCCGG
ACTATTCCAGAGCTCCTTGTCATGTCTGTGATCTCATCCGGGACTCCGAATAATGTTCGATCACCAACATACATAACTCA
TATAAAACTAAATCATGAACGAATGTTAAGCGTGCGGACCCTACGGGTTCGAGAATAATGTAGAAATGAACGAGACGCTT
CTCCAGTCAATAACCAATACCAGGACCTGGATGCCCATATTGGTTCCTACATATTCTACGTAGATCTTTATTGGTTGAAC
CTTTATGACAAAATAGGTAGTTCCCTTTGTCCGTCGGTATGTTACTTGCCCGAGATTCGATCGTCGGTATTTCCATACCT
AGTTCAATCTCATTACCGGCAAGTCTCTTTACTTGTTCCATAATACCTCATCCCGTAACTAACTCCTTAGTCACTTTGCT
TGCAAGCTTCTTGCGATGTTGTATTACCGAGAGGGCCCAGAGATACCTCTTTGTCATACGGAGTGACACATTCCAGTTTC
GATCCATGCCAACTCAACAGACACCTTTGGAGATACCTGTAGAGCACCTTTATGATCACCCATTTATGTTGTGACGTTTG
ATGGCAAACACGGCATTCCTCCGGTGTCCGGGAGTTGCATGATCTCATGGTCGAAGAAACATGTATTTGACATTAAGAAA
GCAGTAGCAATAAACTGAACGATCATATGCTATGCTAACGGTTGGGTCTTGTCCATCACATCATTGTCCTAATGAAGTGA
TCCCGTTGTCAAATGACAACTCATATCTATGGTTAGGAAACCTTAACCATCTTTTGATCAATGAGCTAGTCTAGTAGAGG
CTCACTAGGGACACGGTATTTCTTTATGTGTCCAAACTTGTATTTAAGTTTCCGATCAATACAATTCTAGCATGAATAAT
AAACCTTTATCATGAATAAGGTAATATAATAATAACAACTTTATTATTGTCTCTAGGGCATATTTCCATCACTAACACCA
AGCTCTTTCAGCTTGTGGCTAATGGTAAGCACACAAAGAATTTCATCCCTCACATCAATATCAGAGATGAATTAATC
>SNPs
------------------------S---------------------S---------------------------S-----
------------------S-------------------------------S----S------------------------
-----------------------------S-------S--------------S----------S--S-------------
--------------------------------------------------------------------------------
---S-------------S-S----S----------------------------S-----S-----S-S------------
-------------------------------------S----S--S----------------------------------
--------------------------------------------------------------------------------
-----------------------------S------------------------------------------SSS-----
--------------------SSSS--------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------S------------------------
-------------------------S----------------------------------------------------S-
----S---------------------------------------------------------------------------
-------------------------S---S------------------------S---------S---------------
-------------------S------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------S------------------------------
------------------------------------------------------------------------S-------
----------------------------------------------------------------------------S---
--------S--------------------------------------------------------------S--------
-----------------------------------------------------------------------S--------
---------------------------SS---------------------------------------------------
----S---------------------------------------------------------------------------
--------------------------------------SS----------SS--S-------------------------
--------------------------------SS-------------------------SS-------------------
-------------------------------------S------------------------------S-----------
---SSS-----------------------------------S-----------------S----S---------------
--------------------S-----------------S-----------------------------------------
---------SS-SS------S-------------------SSSSSSS-S--SSS--------------------------
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---------S-----S----------S-----S--------------SS------------------------S------
S-S----S------------S---S--------------------S----------------------------------
----------------------S--------S-----------------SSSSSSSS---S-------------------
--------S-----S---S--S-----------------SS---S-------SS---------S------S---------
-----------S-------------------S------------------------------------------------
--SS-------------S---S----------------------------------------------------------
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-------------------S---------SS------------S--------------S---S--------------
>forward_99
-------------------------------------------------------------------------------G
AGTTGGTTCCTCGGGAAGG-------------------------------------------------------------
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>reverse_1672
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-----------------------------------------------------------------------ACGTGCGTG
CTTTGTGTTG----------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
>forward_664
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----ACCACGTCAGACAACCTACG--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
>reverse_3405
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------CCGATCGAGCTCAAGAGCAT----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
