>input_sequence_72077
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-------------------------------------------------------ATGCATATCTTTGTCAAGAACCCCA
CCGGCAGGACAATTCGGATCAA---GGTCCACTCATCAGACACCTTGTACACCGTCAAGGCAAAGAT-CCAGCAGCAGTA
CCACCTCGTCTTTGGTGGGTTGCAGCTAGAAGACAACCGTACATTGGCCGATTATGGCATCGAGCATGACTCTACGATTG
ACCTCCAGGAAAAGATGCAAATTTTCGTTACGGAGACGCTGTCAGGCAGGACCATCGCCCTCGAGGTCGACAGCCTAGAC
ACTATTAGCAACGTGAA-GTCCAAGATCCAGGACATGGAGGGCTTTCCCAAGGGCCAGCAGTGCGTCATCTTCGCCAGCA
AACAGCTGGAGGACGACAACCGCACCTTGGCTGACCACAACATCTGGAAGGAGTCCACCCTCCTCCTTGTCCTCCGCCCA
TGTAGGCCAGGAGAAAGTAGGATGATGCACCTCTTTGTC---AGGACCCTTGATGGGAGGACCCTGGACCTTGACGTCAG
GAGCTCGGACACCATCAACACTGTCAAGGTGAAGATCTACGAGAAGGATGGCACTCCCCCTATACAGCAGCGCATCATCT
TTGCTGGCAAGCGGCTGGAGGATGGCCGCACCCTGGCGGACTACAAGATTGAGAGCGAGTCTACCGTTGATCTGGTGCTC
CGCCTTTGTGGTTGCTGA--------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------
>chr3A_1_TraesCS3A01G504100
TCCGCGTGGGCTCCCGGGTCAGCCTACCA---CCAGTAAACCTGTGTTCATGTTGTC-AAAGGTTATGTGGAGACGCCAT
GCTCTCATGGCAAATATCATTCACGAATCACGACCATCCAGCCCATGTAAGCTCTTCTGATTAGGTTCC---TTCCATAA
TAGGCCACCATCGTCTGGATTGGGAACCTCTTTCAAGTGTCCGCAAATTTCTTGGTCATGAATTGTCCTGTCGTGCTCTC
AGTATCTAATTGATTGTACTGTTGCTATCCTGACCCCCATG-ACTCGGATAGCTCTTAAGCTG-----GTGCC--TTAA-
--------ATCTCTTTTGTGCATTCATTTCTCTTATCCACCTGATTATGCACAATTTACCTTTCATCAGCTGTCTTTGTA
AATCTTTACCCGGTACTGAAATTCAGAGCTGTTTCAGTGAATCTTTCCTCGCTACTAAAATTCATAAGCTCACACATA--
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------G
ATTGTTGTTCTTTAAGTTA---------------------------------TATAGTGCTAGTGATATAAAATGA-AAC
TAGA-----AATTTATATTTATCAAAAAA-CAGCAGCAATATTCTCCT---------TTAGTGCATCACTAAGTTTGCGC
AGGGTA--------------------------------------------------------------------------
--------------------------------------TAATACAATTTGGCG--------AGTATATATACTGATTTGA
TTAGGGAAAGTAGA-AAAAACGGCAACGTTTGTTGCTACCCGGTGAAAAATTGCACTTGACAGGCATGTTCATAAAATAG
AAGCATCACTTGATTGATAATACCATATATTGTGTTTTATTCC-TAGC-AACTC----ACGGGCACCTAACTAGTCTCTT
CAAT----------------------------------------------------------------------------
--------------------------------------------------------------------------------
---TTACAGAATTGAGTGAACCGTGCATGT--------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------ATATTATTAATGAT--TGCTCAAGACTT
AACT-----TTGCAAGCTAGCTT---------------------------------------------------------
--------------------------------------------------------------------------------
TAGTGTGGCACTTTTTTTCTGTATAAACGAAGTATTTATGCAGTAGATTTCTTTTCTTGCTTCTACTGTTTT--------
AATAATGGGCCCTTTCTACGTTCTTCTGTATTGTTCTACAGCCTAAAT--------------------------------
---------ATATTGTCTAACAATTGTTGATGTTTGTGTCTGTAGCTCATCCAGAATGCATATCTTTGTCAAGAACCCCA
CCGGCAGGACAATTCGGATCAA---GGTCCACTCATCAGACACCTTGTACACCGTCAAGGCAAAGAT-CCAGCAGCAGTA
CCACCTCGTCTTTGGTGGGTTGCAGCTAGAAGACAACCGTACATTGGCCGATTATGGCATCGAGCATGACTCTACGATTG
ACCTCCAGGAAAAGATGCAAATTTTCGTTACGGAGACGCTGTCAGGCAGGACCATCGCCCTCGAGGTCGACAGCCTAGAC
ACTATTAGCAACGTGAA-GTCCAAGATCCAGGACATGGAGGGCTTTCCCAAGGGCCAGCAGTGCGTCATCTTCGCCAGCA
AACAGCTGGAGGACGACAACCGCACCTTGGCTGACCACAACATCTGGAAGGAGTCCACCCTCCTCCTTGTCCTCCGCCCA
TGTAGGCCAGGAGAAAGTAGGATGATGCACCTCTTTGTC---AGGACCCTTGATGGGAGGACCCTGGACCTTGACGTCAG
GAGCTCGGACACCATCAACACTGTCAAGGTGAAGATCTACGAGAAGGATGGCACTCCCCCTATACAGCAGCGCATCATCT
TTGCTGGCAAGCGGCTGGAGGATGGCCGCACCCTGGCGGACTACAAGATTGAGAGCGAGTCTACCGTTGATCTGGTGCTC
CGCCTTTGTGGTTGCTGAGCTGGATGGCCTGCC----------ATTCAACAACTAGTTTTATTCT-GCAGGAGCC-TTCC
TTCCAGTAGTGGTGCG-TTATCAGTAAACTATCATTCTAGTACTGTACGTTAGGAAAATCCATCCTATCACCCGGTGGTA
GTTACCCCACATGTCTCATATACTACCATGTGGTACTATATATACTATTTTATTATTTTAAATATGTTCATATACTATAT
CTAAGATATTTCAAAGCAAGTTAAATGAAAAAATTGCATATGAGCCCATAGTTTTTGTTATATTTGTAAAATACATACAT
ATTTGTATGTAAAAATGAGCATACTCAAAAAATTGTACATACTACCTAAAAATTAGTATATATACTACATAATCATTGTT
ATGTACTACATACTACACGTACATACTCTCGGTTCCGACAGATACTACATACAACATACAAAACGCAAGGTGGTGGTAAC
TACCACTGCTTGTAGGAAACATTTGTCCGTTATATATATATATATATATATATATATATATATATATATATATATATATA
TATATATATATATATATCCTCCGGTATTGTTCCTTCACAGTATAAGTGTGGAGTGTTATCATCAAAACTACGTACTAGCG
GTATCATTTAGCAGTTTGTTATAGTTTGTTAGTGTGTTGAGTCTGTTTATCCATCTGTCATGCCGAACTACTATTAAGAG
TCCCTGGATCTGTATTGTCATCAGTTGATTGAGAATAACAGTCTGTATGCAGTTTGACCGACAAATAGCCTCCTTTCTTT
ACTC----ATTTATTTCCTTTCTACATACCCAAATATTTGTATCCATGTTTTCGATCATCTATGACATGACAGTCAAAAT
TTGAAGAACCCACATGAATGTCACTTTGAGCTGGCATTGGGTAAGAGCTGGAATCAAGTTGTCCTCGTCCTTGCCTTTGG
AGGAGGAGGACGGCAGCGGGAGGACCGGGACGGGGGAGTGGTGGAGGATGAGAAGGAGGCTATGGACTTCCACCA
>chr3D_1
TCCACGTGGGCTCCCTGGTCAGCCTGCTGCCTCCAGTAAACCTGTGTTCATGTTGTC-AAAGGTTCTGTGGAGACGCCAT
GCTCTCATGGCAAATATCATTCATGAATCATGACCATCCAGCCCATGTAAGCTCTTCCGGTTGGGTTATCAGTTCCATAA
CAGGCCACCTTCGTCTGGATTGGGAACCTCT-TCAAGTGTCCGCAAATTTCTTGGTCATGAATTGTCCTGTCATGCTCTC
AGTATCTATTTGGTTCTACTGTTCCTATCCTGACCCCCATG-ACTCGGATAGCTCTTAAGCTG-----GTGCC--TTAA-
--------ATCACTTTTGTGCATTCATTTCTCTTATCCACGTGATTATGCACGATTTACCTTTCATCAGCTGTCTTTGTA
AATCTTTCCCTGGTACTGAAATTCAGAGCTGTTTCAGTGAATGTTTCCTCCCTACTAAAATTCATAAGCTCACACATA--
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------G
ATTGTTGTTCTTTAAGTTA---------------------------------TATATTGCTACTGATATAAACTGAAA-C
TAGA-----AATTTATATTTAGCAAAAAA-CAGCAGCAATATTCTCCT---------TTAGTGTATCACTAAGTTTACGC
AGGGTA--------------------------------------------------------------------------
--------------------------------------TAATACAATTTGGCG--------AGTATATATACTGATGTGA
TTAGGGAAAGTAGAGAAAAACGGCAACGTTTGTTGCTACCCTGTGAAAAACTGCACTTGACAGGCATGTTCACCAAATAG
AAGTATCACTTGATTGATAATACCATATGTTTTGTTTTATTCT-TAGC-AACTAATTAACGGGCACCTAACTAGTCTCTT
CAAT----------------------------------------------------------------------------
--------------------------------------------------------------------------------
---TTACAGAACTGA-------------GTGAACCGTGCAT---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------GTATATTATTAATGAC--TGCTCAAGACTT
AACT-----TTGCAAGCTAGGCT---------------------------------------------------------
--------------------------------------------------------------------------------
TAGTGCGGCA-CCTTTTTCTGTATAAACAAAGTATTTATGCAGTAGATTTCTCTTCTTGCTTCTACTGTTTC--------
AATAATGGGCTCTTTCTA--------------------CAGCCTAAAT--------------------------------
---------ATATTGTCTAACAATTGTTGATGTTTGTGTATGTAGCTCATCCGGAATGCATATCTTTGTCAAGAACCCCA
CCGGCAGGACAATCCGCCTCAA---GGTCCACTCATCAGACACCCTATACACCATCAAGGCAAAGAT-CCAGCAGCAGTA
CCACCTCGTCTTTGATGGGTTGCAGCTAGAAGACAACCGTACGTTGGCCGATTATGGCATCGAGCACGACTCTACGATTG
ACCTCCAGGAAAAGATGCAAATCTTCGTGACGGAGACGCTGTCAGGCAGGACCATCGCCCTCGAGGTCGACAGCCTAGAC
ACTATCGGCAACGTGAA-GTCCAAGATCCAGGACATGGAGGGCTTTCCCAAGGGCCAGCAGTGCCTCATCTTCGCCAGCA
AACAGCTGGAGGACGACAACCGCACCTTGGCTGACCACAACATCTGGAAGGAGTCCACCCTCCTCCTTGTCCTCCGCCCG
TGTAGGCCAGGAGAAAGTAGGATGATGCACCTCTTTGTC---AGGACCCTGGATGGGAGGACCCTCGACCTTGACGTCAG
GAGCTCGGACACCATCAACAGTGTCAAGGTGAAGATCTACGAGAAGGATGGCTATCCCCCTATACAGCAGCGCATCATCT
TTGCTGGCAGGCAGCTGGAGGATGGCCGCACCCTGGCGGACTACAAGATTCAGAGCGAGTCTACCGTTGATCTGGTGCTC
CGTCTTTGTGGTTGCTGAGCTGGATGGCCTGCC----------ATTCAACAACTAGTTTTATTCT-GCAGGAGCC-TTCC
TTCCAGTAGTGGTGCGTTTATCAGTAAACTATCATTCTAGTATTGTACGGTAG---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----TATATATATATATCCTCCGGTATTGTTCCTTCACAGTAGAAGTGTGGAGTGTTATCAGCAAAACTACGTACTAGCA
GTATCATTTAGCAGTTTGTTAGAGTTTGTTAGTGTGTTGAGTCTGTTTATCCATCTATCATGCCGAACTACTATTAAGAG
TCCCTGGATCTGTATTGTCATTAGTTGATTGAGAATA-CAGTCTGTATGCAGTTTGACCGACAAATAGCTTCCTTTCTTT
TCTCATTTATTTATTTCCCTTCTGCATACCCAAATATTTGTCTCCATGTTTTCGATCATCTATGACATCACAGTCAAAAG
TTGAAGAA-CCACATGAATGCCACATT-----------------GAGCTGGAATCAAGTTATCCTCGTCCTTGCCATTGG
AGGAGGAGGACGGCAGCGGGAGGACCGCGAC-GGGGAGTGGTGGAGGATGAGAAGGAGGCTTTGACT--------
>chr3D_6
-----GTGAGCTCACTGGTCAGCCTGCCA---GCAGTGCACCCATGTCCGCATTGTCAAAAGGTTCCGTGGAGACGCCAT
GCTCTCATGTCAAATATCATTCA-------CGACCATCCAGCCCATGTAAGCTCTTCTGGTCGGGTTATCAGTTTCGTAA
CAGGCCGCCTTTGTCTGGATTTGGAACCTCT-TCATGTTTCCTACAGTGCATTGGAAGTGT-------------------
------------------CTGTTGCTATCCGGACCCCCATTAACTCTGATAGCTCTTAAGCTGCTTAGGTGCC--GTAAC
TCCCCATTCTCACTTTTGTGCACCCATTTCTCTTATCCACATGATA--GTATGATTTAACTTCCATCAGCTGTATTTGTG
AATCTTTCCCCGGTACTGAAATTCAGAGCTGTTTCAGTGAATCTTTGCTTGCTACTCAAATTGTTAAGCTCACACATA--
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------G
ATCGTTGTTCTTTTTT-AGACAGTTT--CTGTCATGTATGTGTCACAGAAGTTATAGTGCTATTGATATAAAATGA-A-C
TAGA-----AATTTATATTTAGCAAAAAAAAAGCAGCAATATTCTCC----------TTTGTGTACCACTTAGTTTGCTC
AGGGTA--------------------------------------------------------------------------
--------------------------------------TAATACAGTTTGGTC--------AGTATATATGCTGAGACAA
ATAGGGAAAGTAGAGAAAAACGGCAATGTTTGTTGCTACCCTGTGAAAAGCTGCACTTGACAGGTGCGTTCAACAAATAG
AAGTATCACTTGATTGATAATACCATATGTTCCATTTTATTCCCTAGC-AACTC----AC-GGCACCTAACTAGTCTCTA
CAAT----------------------------------------------------------------------------
--------------------------------------------------------------------------------
---GTATAGAACTGA-------------CT--------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------ATATTATTAATGAT--TGCTCAAGATTT
AACT-----TTGTATGCTAGGTT---------------------------------------------------------
--------------------------------------------------------------------------------
TAGTGTGGCACCCTTGTTCTGTACAAACAAAGTATTTATGCAGTACATTTCTCTTTTTGCCTGTACTGTTCTTTTATTCA
AATAATGGGCTCTTTCAA--------------------CTACCTGTAATTGTTGAC----G-CTTTTTATGTACTGTTCT
ACATTCTAAATATTGTCTAACAATTGGTGATGTTTGGTTTGCTAGCTCATCCGGAATGCGTATCTTTGTCAAGACCCCCA
CCGGCAGGACAATCTGCCTCAA---GGTCCACTCATCAGACACCCTGTACACCGTCAAGGCAAAGATTCCAGCAGCAGTA
CCGCCTCTTCTTCGATGGGGTGCAGCTAGAAGACAACTGTACATTGGCCGACTATGGCATCCAGCATGACTCTACGATTG
ACCTCCAGGAAAAGATGCAAATCTACGTGACGGAGACGCGGGCAGGCAGGACTATCACCCTTGAGGTCGACAGCCTAGAC
ACCATCGGTAACGTGAAAGTCCCAGATCCAGGACATGGAGGGATTTCCCAAGGGCCAGCAGTGCCTCATCTTCGCCAACA
AACAACTGGAGGACGACAACCGCACCTTGGCTGACTACAACATCTGGAAGGAGTCCACCCTCCTCCTCGTCCTCCGCCCG
CGTAGGCCAGGAGAAAGTAGGATGATGCACATCTTTGTC---AAGACTCTGAAAGGGAAGACCCTCACCCTTGAGGTTGA
GAGCTCGTATACCATCGAGAATGTCAAGGTGAAGATCTATGAGCAGGACGGCACTCCCCCTATGCAGCAGGTCATCATCT
TTGAGGGCATGCGTCTGCAAGAAGACCGCACCCTGGCGGACTACGATGTTCCGAGAGAATCTACCGTTTATATGGTGAAA
CACCAATGTGGTTGCTGAGCTACATGGCCTGCC----------ATTCAACAACCAGTTTTATTTTTGCTGGAGCTTTTCT
TTCCAGTAGTGGTGCG-TTATCACTAAA----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------
>chr3B_185
TTCTAA--------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------GTGCCCGCAAATTTCTTGGTCATGAATTGTCCTGTTGTAATCTC
AATATTTTTTTGGTTCTACTGTTGCTATCCTGACCCCCATG-ACTCCGATGGCTCTTAAGTTGTTTATAGGTGAATTAA-
--------ATCAGTTTTGTGCATTCATTTTTCTTATCCACGTGATAGCGTATGATTTACCTTTCATCAGCTGTCTTTGCG
AAATTCTCACCAGTACTGAGATTCAGAGCTGTTTCAGTGAATCTTTCCTCGCTACTACAATTCATAAGTAGACACATA--
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------G
TTCGTTATTCTTTTTT-AGACAGTTTACCTAT-GTGTTTTTGCCAGAGAAGTTATAGTGCTATTGATGTCAAATGA-AAC
TAGG-----AATT-ATATTTAGAAAAATGT---CAGCAATATTCTATA---------GTAGTGTACCACTAAGTTTGTCC
AGGTTATAAACTTATACTCCCTCCGTCTCAAAATTTTTGTCTTAGATTCGTCTAAATACGGATGTATCAAGTCACGGTTT
AGTATTAGGTACATCCGCATCTAGACAAAAGGTGGGAGTAATACAATTTGGTG--------AATATATATGCTGAGA---
ATAGGGAATGTAGAGAAAAACGTTGAAGTTTGTTGCTACCCTGTGAGAAACTGCATTTGACAGGTGTGTTGACCAAATAG
AAGCATCACTTGATTGATAATACCACATGTTCTGTTTTATTCCCTAGC-AACTC----A---------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------
>chr3D_248
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------TGT-------------------
------------------CTGTTGCTATCCTGACCCCCATG-ACTCTGATAGCTCTTAAGCTGTTTAGGTGCC--TTAAC
TCATTTTTCTCACTTTTGTGCATTCATTTCTCTTATCCACATGATAGAGTATGATTTAACTTTCATCAGCTGTCTTTGGG
AATCTTTCACCGGTACTGAAATTCAGAGCTGTTTCAGTGAATCTTTGCTCGCGACTCAACTTTGTAAGCTAACACATA--
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------G
ACCGTTGTTCTTTTTG-AGACAGTCCTGCTGTCGTGTATGTGTCAGAGAAGTTATAGTGCTATTGATATCAAATGT-AAC
TAGA-----AATTTATATTTAGCAAAAAA-CAGCAGCAATATTCTCCT---------TTAGTTTACCACTTAGTTTGCTC
AGGGTA--------------------------------------------------------------------------
--------------------------------------TAATACAATTTGGTG--------AGTATATATGCTGAGACAA
ACAGGGAAAGTAGAGAAAAACGCCCATGTTTGTTGCTACCCTGTGAAAAACTCCACTTGACAGGTGTGTTCACCAAA-AG
AAGTATCACTTGATTGATAATACCATATGTTCCATTTTATTCCGTAGC-AACTC----AT-GACACCTAACTAGTCTCTA
CAATAGAAATGGTATTGAACCAGACATAACCCCTTCCCATTATGATCATAACGGAAATACAATTGTCCCAAGCCATCAGC
CAAATTCAAGGAAACTAGAAAGGGGAAAGCGAGTCACACACATTGCCGGGAAACCCACCGCAAGTGCCCGGTCTCTACAA
TATGTATAGAACTGA-------------GT--------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------ATATTATTAGTGAT--TGTTCAAGTCTT
AACT-----TTGCATGTTA-GCT---------------------------------------------------------
--------------------------------------------------------------------------------
TAGTGTGGCA-CCTTGTTCTGTATAAACAAAGTATTTATGCAGTACATTTCTCTTCCTGCTTGTTGTTCTATTA---TCA
AATATTGGGCTCTTTCTA--------------------CTACCTAGAATTGTTGAG----G-TTTTTTGTGTTCTGTTCT
ACAGCCTAAATATTGTCTAACAATTGGTGATGTTTGGTTTGCTAGCTCTTCCAGAATGCGTATCTTTGTCAAGACCCCCA
CCGGCAGGACAATATGCCTCGA---GGTCCACTCATCAGACACCCTGTACACTGTCAAGGCAAAGAT-CCAGCAGCAGTA
CCACCTCGTCTTTGATGGGGTGCAGCTAGAAGACAACCGTACATTGGCCGATTATGGCATCCAACATGACTCTATGATTG
ACCTCCAGGAAAAGATGCAAATCTACGTGACGGAGACGTGGGGAGGCAGGACCATCACCCTTGAGGTCGACAGCCTAGAC
ACCATTGGTAACGTGAA-GTCCAAGATCCAGTACATGGATGGATTTCCCAAGAGCCAGCAGTGCCTCATCTTTGCCAACA
AACAGCTGGAGGACGATAACCGCACCTTGGCTGACCACAACATCTGGAAGGAGTCCACCCTCCTCCTTGTCCTCCGCTCG
TGTAGGCCAGGAGAAAGTAGAATGATGCGCATCTTCGTG---AAGACGCTGACTGGAAAGACCATCACTCTTGAGGTTGA
GAGCTTGTATACCATCGACAATGTCAAGGTGAAAATCTACGAGAAAGATGGCACTCCCCCTATACAGCAGCGCATCATCT
TTGCTGGCAGGCAGCTGGAGGATGGCCGCACCCTGGCGGACTACAAGATTCACAACGAGGATACCCTTCATTTGGTGCTC
CGCCAATGTGGTTGCTGAGCTGCATGGCCTGCC----------ATTCAACAACCAGTTTTATGTT-GCAGGAGCC-TTCC
TTACAATAATGGTGCG-TTATCAGTGAACTATCATTCTAGTACT------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------
>chr3B_266
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------ACACCCATG-CCTCTGATAGCTCTTAAGCTATTTAGGTGCC--TTAAC
TCAC-TTTCTCACTTTTGTGCATTCATTTCTCTTGTCTACACGAAAGCGTATGATTTACTTTTCATCAGCTGTCTTTGTG
AATCTTTCCCC------GAAATTCAGAGCTGTTTCAGTGAATCTTTGCTTGCTACTCAAATTCTTAAGCTCACACATA--
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------G
ATCGTTGTTCTTTTTTTAGACAGTTT--CTGTCGTGTATGTGCCAGAGAAGTTATAGTGCTATTGATATATAAAATG---
--AACTAGAAATTTATATTTAGCAAAAAAACAGCAGCAATATTCACC----------TTTGTGTACCACTTAGTTTGCTC
AGGGTA--------------------------------------------------------------------------
--------------------------------------TAATACAGTTTGGTC--------AGTATATATGCTGAGACAA
ATAGGGAAAGTAGAGAAGAACGGCGATGTTTGTTGCTACCCTGTGAAAAACTGCACTTGACAGGTGTGTTCACCAAATAT
AAGCATCACTTGATTGATAATACCATATGTTCCATTTTATTCC---------------------------------TCTA
CAAT----------------------------------------------------------------------------
--------------------------------------------------------------------------------
---GTATAGAACTGA-------------GT--------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------ATATTATTAAAGAT--TTCTCAAGACT-
-ACT-----TTGTATGCTA-GGCTTAGCAGTGCCGGATACAGGCCCCAGGCCCCCAGGGCCCAGGCCTGGGGCGTGAGGC
CCAATTTCTTCCTAGACTGTAGCTAATTACTGTGCACATCGCTACAGTATATGAAGAGGGCCCGGGGCGGCCCGATGGGC
TAGTGTGGCACCCTTATTCTGTATAAACGAAGTATTTATGCAGAACATTTCTCTTTTTGCTTGTACTGTTCTTTTATTCA
AATAATGGGCTCTTTCAA--------------------CTACCTGGAATTGTTGAC----GCTTTTTTATGTACTGTTCT
ACAGTCTAAATATTGTCTAACAATTGGTGATGTTTGGTTTGCTAGCTCATCCGGAATGCGTATCTTTGTCAAGACCCCCA
CCGGCAGGACAATCTGCCTCAA---GGTCCACTCATCAGACACCCTGTACACTGTCAAGGCAAAGAT-CCAGCAGCAGTA
CCGCCTCTTCTTCGATGGGGTGCAGCTAGAAGACAACCGTACATTGGCCGATTATGGCATCCAGCATGACTCTACGATTG
ACCTCCAGGAAAAGATGCAAATCTACGTGACAGAGACGCGGGCAGGCAGGACCATTGCCCTTGAGGTTGACAGCCTAGAC
ACCATCGGTAACGTAAA-GTCCAAGATCCAGGACATGGAGGGTTTTCCCAAGGGCCAGCAGTGCCTCATTTTCGCCAACA
AACAGCTGGAGGATGACAACCGCAGCTTGGCTGACCACAATATCTGGAAGGAGTCCACCCTCCTCCTCGTTCTCCGTCCC
TGTAGGCCAGGAGAAAGTAGGATGATGCACATCATTGTC---AAGACTCTGTACGGGAAGACCCTCACCCTTGAGGTTGA
GAGCTCGTATACCATCGAGAATGTCAAGATGAAGTTCTACGAGCAGGAAGGCACTCCCCCTATGCAGCAGCGCATCATCT
TTGCTGGCAAGCAGCTGGAGGACGACCGCACCCTCGCGGACTACAACATTCAGACAGAAACTACCGTTGTTATGGTGAAA
CGCCTTTGTGGTTGCTGAGCTTCATGGCATGCC----------ATTCAACAACCAGTTTTATTTT-GCTGGAGCC-TTCC
TTCCAGTAGTGGTGCG-TTATCAGTAAA----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>chr3D_295
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------G-----GTGTC--TTAA-
--------CTCACTTTTGTGCATTCATTTCTCTTATCCACATGATACTATATGATTTACTTTTCATCAGCTGTCTTTGTG
AATCTTTCCCCGGTACTGAAATTCAGATCTGTTTCAGTGAATCTTTGCTCGCTGCTCAAATTCATAAACTCGCACATA--
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------G
ATCGTTGTTCTTTTTT-AGACAGTTTTTCTGTCGTGTATGTGTCAGAGAAGTTATAGTGCTATTGATATAAAATG-----
-AGA-----AGTTTATATTTAGCAAGAAA-CAGCAGCAATATTCTCCT---------T------------TAGTTTCCTC
AGGGTA--------------------------------------------------------------------------
--------------------------------------TAATACAATTTGGTGACTATATAACTATATATGCTGAGACAA
ATAGGGAAAGTAGAGAAAAACGGCGACGTTTGTTGCTACCCTGTGAAAAACTGCACTTGACAGGTGTGTTTACCAAATAG
AAGT-TCACTTGATTGATAATACCATATGTTCTATTTTATTCCCTAGGTAAC-C----AC-GGCACCTAACTAGTCTCTA
CAAT----------------------------------------------------------------------------
--------------------------------------------------------------------------------
---GTATAGGACTGA-------------GT--------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------ATATTATTAATGAT--TGCTCAAAACTT
AACT-----T-----GCTAGGCT---------------------------------------------------------
--------------------------------------------------------------------------------
TAGTGTGGCA-CCTTGTTCTGTATACACGAAGTATTTATGCAGTACATCTCTCTTCTTGTCTGTACTGTTCTTTTATTCA
AATAATGAGCTCTTTCTA--------------------CTACCTGGAATTGTCGAT----G-CTTTTTGTGTACTGTTCT
ACAGTTTAAATATTGTCTAACAATTGGTGATGTTTGGTTTGCTAGCTCATCCGGAATGCGTATCTTTGTGAAGACCCCCA
CCGGCAGCACAATCTGCCTCAA---GGTCCACTCATCAGACACCCTGTACACTGTCAAGGCAAAGAT-CCAGCAGCAGTA
CCGCCTCTTCTTCGATGGGGTGCAGCTAGAGGACAACCGTACATTGGCCGATTATGGCATCCAGCATGACTCTACGATTG
ACCTCCAGGAAAAGATGCAAATCTACGTGACAGAGACGCGGGCAGGCAGGACCATCACCCTTGAGGTTGACAGCCTAGAC
ACCATCAGTAACGTGAA-GTCCAAGATCCAGGACATGGAGGGCTTTCCCAAGGGCCAGCAGTGCCTCATCTTTGCCAACA
AGCAACTGGAGGACGACAAGCGCACCTTGGCTGACCACAACATCTGGAAGGAGTCCACCCTCCTCCTCGTCCTCCGCCCC
TGTAGGCCAGGAGCAAGTAGGATGATGCACATCTTTGTC---AAGCCTCTGAAAGGGAAGACCCTCACCCTTGAGGTTGA
GAGCTCGTGTACCATCGACAATGTCAAGGTGAAGATCTACGAGCAGAAAGGCACTTGCCCTAGCCAGCAGCGCCTCATCT
TTGCTGGCAAGCAGCTGGAGGACGGCCGCACCCTGGCGGACTACAACATTCAGAGCGAGAACACCGTTCATTTGGTGTAC
CGCCTTTGTGGTTGCTGAGCTGCATGGCCTGCC----------ATTCAGTAACGAGTTTTGTTTT-GCTGGAGCC-TTCC
TTCGAGTAGTGGTGCA-TTGTCAGTAAACTATCATGCTAGTACT------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>chr3D_351
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------TTTACCTTTCATCAGCCGGCTTTGTG
AATATTTCCCCAGTACTGAAATGCAGAGCTGTTTCAGTGAATCTTTCCTTGCTACTAAAATTCATAAGCTCACACATACT
CCCTCCGTTCCCAAATATAAGTATTTCTAGAGATTCCACCAAGTGACTACATACGGAGTAAAATGAGTGAATCTACACTC
TAAAATGTCTACATACATCCGTATGTTGTATTCCATTTGAAATGTCTAAAAATACTTATATTTAGGAACGGAGGGAGTAG
AACATTGTTCTTTTTA-AGACAGTTTTTCCATCGTGTATGCCATAGAGAAGTTATAGTGCTATTGATATAAAATG-----
-AAACTGGAAATTTATATTTAGAAAAAAAACAGAGGCAATATTCTCCT---------TTAGTGTACCGCTAAGTTTGCCC
AGGGTA--------------------------------------------------------------------------
--------------------------------------TAATACTATAATTCAATTTGGTAAGTATATATGCTGAGATGA
ATAGGGAAAGTAGAGGAAAACAGCGACATTTGTTACTATTCTGTGAAAAACTGCACTTGACAGGTGTGTTCACCAAATAG
AAGTATCACTTGATTGATAATACTATATGTTCCGTTTTATTCCCTGGC-AACTC----ACGGGCACCTAACTAGTCTCTT
CAAT----------------------------------------------------------------------------
--------------------------------------------------------------------------------
---GTACAGAACTGA-------------GTGAACTATGCATGTACTCCCTCCGTTCCTAAATGTAAGTCTTTTTAGAGAT
TCCAATATGGACTACATACGGAGCAAAAATTGCAAAATGAGTGAATCTACACTCTAAAATATGTCTATATACATCCGTAT
GTAGTCCATATTGAAATCTCTAAAAGGACTTATATTTAGGAACGGAGGAAGTATATTATTAACGAT--TCCTCAAGACTA
AACTTTGCAT-----GCTAGGCT---------------------------------------------------------
--------------------------------------------------------------------------------
TAGTGTGGCA-CCTTGTTCTGTCTAAACGAGGTATTTATGCAGCAGATTTCTCTTCTTGTTTGTACTGTTCTTTTATTTA
AGTAATGG-CTCTTTCTA--------------------CTACCTGGAATTGTTGAAAAACG-TTTTTTGTGTATTGTTCT
AGAGCCTAAATATTATCTAACAATTGGTGATGTTTGGTTTGCTAGCTCATCCGGAATGCGTATCTTTGTCAAGACACCCA
CTGGCAGGACAATCTGCCTCAA---GGTCCACTCATCAGACACCCTGTACACCGTCAAGGCAAAGAT-CCAGCAGCAGTA
CCGCCTCGTCTTTGATGGGGTGCAGCTAGAAGATAACCGTACATTGGCCGATTATGGCATCCAGCATGACTCTACGATTG
ACCTCCAGGAAAAGATGCAAATTTACGTGACAGAGACGCGGGAAGGCAGGACCATTGCCCTCGAGGTCGACAGCCTAGAC
ACCATCGGTAACGTGAA-GTCCAAGATCGAGGACATGGAGGGCTTTCCCAAGGGCCAGCAGTGCCTCATCTTCGCCAACA
AATAGCTGGGGGACGACAACCGCACCTTGGCTGACCACAACATCTGGAAGGAGTCCACCCTTCTCCTCGTCATCCGCTCG
TGTAGGCCAGGAGAAAGTAGAATGATGCGCATCTTAGTG---AAGACGCTAACTGGAAAGACCATCACTCTTGAGGTTGA
GAGCTTGTATACCATCGACAATGTCAAGGTGAAAATCTACGAGAAGGATGGCACTCCCCCTATACAGCAGCGCATCATCT
TTGCTGGCAGGCTTCTGGAGGATGGCCGCACCCTGGCAGACTACAAGATTCACAACGAGGATACCCTTGATTTGGCGGTC
CGCCAATGTGGTTGCTGAGCTGCATGGCCTGCC----------ATTCAACAACCAGTTTTATTTT-GCAGGAGCC-TTCC
TTACA----TGGTGCG-TTATCAGTGAACTATCATTCTAGTACT------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>chr3A_475
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------TATAGTGCTATTGATATAAAATG-----
-AAA-----AGTTTATATTTAGCAAGAAA-CAGCAGCAATATTCTCCT---------TTAGTGTACCACTTAGTTTCCTC
AGGGTA--------------------------------------------------------------------------
--------------------------------------TAATACAATTTGGTGACTATACAACTATATATGCTGAGACAA
ATAGGGAAAGTAGAGAAAAACGGCGACGTTTGTTGCTACCCAGTGAAAAACTGCACTTGACAGGTGTGTTTACCAAATAG
AAGT-TCACTTGATTGATAATACCATATGTTCCATTTTATTCCCTAGGTAACTC----AC-GGCACCTAACTAGTCTCTA
CAAT----------------------------------------------------------------------------
--------------------------------------------------------------------------------
---GTATAGGACTGA-------------GT--------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------ATATTATTAATGAT--TGCTCAAAACTT
AACT-----T-----GCTAGTCT---------------------------------------------------------
--------------------------------------------------------------------------------
TAGTGTGGCA-GCTTGTTCTGTATACACGCAGTATTTATGCAGTACATCTCTCTTCTTGTCTGTACTGTTCTTTTATTTA
AATAATGGGCTCT--CTA--------------------CTACCTGGAATTATCGAT----GCTTTTTTGTGTACTGTTCT
ACAGTCTAAATATTGTCTAACAATTGGTGATGTTTGGTTTGCTAGCTCATCCGGAATGCGTATCTTTGTGAAGACCCCCA
CCGGCAGCACAATCTGCCTCAA---GGTCCACTCATCAGACACTCTGTACACTGTCAAGGCAAAGAT-CCAGCAGCAGTA
CCGCCTCTTCTTCGATGGGGTGCAGCTAGAGGACAACCGTACATTGGCCGATTATGGCATCCAGCATGACTCTACAATTG
ACCTCCAGGAAAAGATGCAAATCTACGTGACAGAGACGCGGGCAGGCAGGATCATCACCCTTGAGGTTGACAGCCTAGAC
ACCATTAGTAACGTGAA-GTCCAAGATCCAGGACATGGAGGGCTTTCCCAAGGGCCAGCAGTGCCTCATCTTTGCCAACA
AGCAACTGGAGGACGACAAGCGCACCTTGGCTGACCACAACATCTGGAAGGAGTCCACCCTCCTCCTCGTCCTCCGCCCC
TGTAGGCCAGGAGCAAGTAGGATGATGCACATCTTTGTC---AAGCCTCTGAAAGGGAAGACCCTCACCCTTGAGGTTGA
GAGCTCGTATACCATCGACAATGTCAAGGTGAAGATCTACGAGCAGAAAGGCACTCCCCCTATGGAGCAGCGCCTCATCT
TTGGTGGCAAGCAGCTGGAGGACGGCCGCACCCTGGCGGACTACAACATTCAGAGCAAAAACACCGTTCATTTGGTGTAC
CGCCTTTGTGGTTGCTGAGCTGCATGGCCTGCC----------ATTCAGTAACTAGTTTTATTTT-GCTGGAGCC-TTCC
TTCGAGTAGTAGTGCA-TTGTCACTAAACTATCATTCTAGTACTGTCCGTTAG---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>chr3A_475
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------TATAGTGCTATTGATATAAAATG-----
-AAACTAGAAATTTATATTTAGCAAAAAAACAGCAGCAATA---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------GTG--------AGTATATATGCTGAGACAA
ATAGGGAAAGTAGAGAAAAATGGCTACGACTGTTGCTACCCTGTGAAAAACTGCACTTGATAGGTGTGTTCACCAAATA-
AAGTATCACTTGATTGATAATACCATATGTGCCATTTTATTCCCTAGC-AACTA----AC-GGCACCTAACTAGTCTCTA
CAAT----------------------------------------------------------------------------
--------------------------------------------------------------------------------
---GTATAGAACTGA-------------GT--------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------ATATTATTAATGATATTGCTCAAGACTT
AACTTTGCAT-----GCTAGGCT---------------------------------------------------------
--------------------------------------------------------------------------------
TAGTGTGGCA-CCTTGTTCTGCATAAACAAAGTATTTATGCAGTACATTTCTCTTCTTGCTTGTACTGTTCTTTTATTCA
AATAATGGGCTCTTTCTA--------------------CTACCTGGAATTGTTGAC----A-CTTTTTGTATACTGTTCC
ACAGTCTAAATATTGTCTAACAATTGGTGATGTTTGGTTTGCAAGCTTATCCGGAATGCATATCTTTGTGAAGACCCCCA
CCGGCAGGACAATCTGCCTCAA---CGTCCACTCATCAGACACCCTGTACACCGTCAAGGCAAAGAT-CCAGCAGCAGTA
CCGCCTCTCCTTCGATGGGGTGCAGCTAGAAGACAACCATACATTGGCCGATTATGGCATCCAGCATGACTCTACGATTG
ACCTCCGGGAAAAGATGCAAATCTACGTGACGGAGACGCGTGCTGGCAGGACTATCATCCTTGAGGTCGACAGCCTAGAC
ACCATCGGTAACGTGAA-GTCCAAGATCGAGGATATGGAGGGCTTTCCGAAGGGTCAGCAATGCCTCATCTTCGCTAACA
AACAGCTGGAGGACGACAACCGCAGCTTGGCTGACCACAACATCTGGAAGGAGTCCACCCTCCTCCTCGTCCTCCGGACG
TGTAGGCCTGGAGAAAGTAGGATGATGCACATCTTTGTC---AAGACTCTGGAAGGGAAGACCCTCAACCTTGAGGTTGA
GAGCTCGTATACCATCGAGAATGTCAAGGTGAAGATCTACGAGCAGGACGGCACTTGCCCTATGCAGCAGCGCATCATCT
TTGCTGGCAAGCATCTGCAGGACGACCTCACCCTGGCGGACTACAACATTCAGAGAGAATCTACCCTTCATGTGCTGAAA
CGCCTTTGTGGTTGCTGAGCTACATGGCTTGGC----------GTTCAACAACCAGTTTTATTTT-GCTGGAGCC-TTCT
TTCCAGTAGTGGTGCG-TTATCATTAAA----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>chr3B_475
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------TATAGTGCTATTGATATAAAATG-----
-AAACTAGAAATTTATGTTTAGCAAAAAAACAAAAGCATTCTCCTTTAGTGTACCACT------------TAGTTTGCTC
AGGGTA--------------------------------------------------------------------------
--------------------------------------TAATACAATTTGGTGAGTATATA--TATATATCCCGAGACAA
ATAGGGGAAGTACATAAAAACGGCGACGTTTGTTGCTACCCTGTGAAAAACTGCACTTGACAGGAGTGTTCACCAAATAG
AAGTATCACTTGATTGATAATACCATATGTTTCATTTTATTCCCTAAC-AACTC----AC-GGCACCTAACTAGTCTCTA
CAGT----------------------------------------------------------------------------
--------------------------------------------------------------------------------
---GTATAGAACTGA-------------GT--------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------ATATTATTAATGAT--TGCTCAAGACTT
AAATTTGCAT-----GCTAGGCT---------------------------------------------------------
--------------------------------------------------------------------------------
TAGTGTGGCA-CCTTGTTCTGTATAAACGAAGTATTTATGCAGTACATTTCTCTTCCTGGTTGTACTGTTCTTTTAGTTA
AAAAACGGGTTCTTTCTA--------------------CTACCTGGAATTGTTGAC----T-CTTTTTGTGTACTGTTCT
ACAGTCTACATATTCTCTAACAATTCGTGATGTTTGGTTTCCTAGCTCAACCGGGATGCGTGTCTTTGTCAAGACCCCCA
CTGGCAGGACAATCTGCCTCAA---GGTCCACTCATCAGACACCCTGTACACTGTCAAGGCAAAGAT-CCAGCAGCAGTA
CCGCCTCTTCTTCGATGGGGTGCAGCTAGAAGACAACCGTACATTGGCCGATTATGGCATCCAGCATGACTCTACGATTG
ACCTCCAGGAAAAGATGCAAATCTACGTGACGGAGATGCGGGCAGGCAGGACCATTGCCCTCGAGGTTGACAGCCTAGAC
ACCATCGGTAACGTGAA-GTCCAGGATCCAGGAGATGGAGGGCTTTCCCAAGGGCCAACAGTGCCTCATCTTCGCCAACA
AACAGCTGGAGGATGACAACCGCAGCTTGGCTGACCACAACATCTGGAAGGAGTCCACCCTCCTCCTTGTCCTCCGCCCG
TGTAGGCTAGGAGAAAGTAGGATAATGCACATCTTTGTC---AAGCCTCTGAAAGGGAAGACCCTCACCCTTGAGGTTGA
GAGCTCGTATACCATCGACAATGTCAAGGTGAAGATCTATGAGCAGGAAGGCACTTGCCCTAGCCAGCAGCGCCTCATCT
TTGCTGGCAAGCAGCTGGCGGACGGCTGCACCCTGGCGGACTACAACATTCGGAGCGAG---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>chr3B_747
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------TAACTAGTCTCTT
CAAT----------------------------------------------------------------------------
--------------------------------------------------------------------------------
---ATATAGAACTGA-------------GTGATAC---CAT---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------GTATATTTTTATGG---TTGCTCATGTCTT
AACTTTGCAT-----GCTAGGCT---------------------------------------------------------
--------------------------------------------------------------------------------
TAGTGCGATA-CCATGTTTTGTATAAACAAGGTATTTACAGAGTAGATTTCTCTTCTAGCTTGTATTTTTTTTATTTAGA
TCCTTA---CTTGTACTA--------------------CCTGCTGGAATTTTTTAT----G--TTTTTGTGTATCGTTCT
ACAGCCTAAATATTGTCTAACAATTGGTGATTTTTGGTTTGCTAGCCCATCCAAAGTGCACATCTTTGTCAAGAATCCTG
CCGGCAGGAAAATCTGTCTCAGGGGGGTACACTTGTCGGACACCCTTTACACCATCAAGGCAAAGAT-CCAGGAGCAGTA
CAGCCTCGTCTTCGACGGGGTGCAGCTGGAAGACAGCCGTACATTGGCGGATTACGGCATCAAGCATGATTTCACGCTTG
ACCTCCAAGAAAAGATGCAAATCTTCGTGACGGAGACGCTAGGAGGTAGGACCATCACTCTCGAGGTCGACAGCCTAGAC
ACCATTGACAAGGTGAA-GGCCAAGATCGAAGACATTGAGGGCTTTCCAAAGCTCCAGCAGTGCCTCATCTTTGACAACA
AGCAGCTGGAGGACGGCACACGCACCTTGGCTGAACACAACATTGGTAAAGGGTCCACTCTTCTCCTCATCCTCCTCCCG
TGTAGTCCAACTTCTG------TGATGCAAGTATTCGTGAAGACGCCGCCGGAAGGCAAGGTCCTCACCCTTAAGGTCGG
GCAATCGGACACCATCAACAGTGTCAAGGTGAAGATCTATGAGAAGAACGGCGCCCCCCCTAGACAGCAGCGCATCATCT
TTGCTGGCAATCAGCTGGAGGACCACCGCACCCTGGCGGACTACAAGATTTACAGCGAATGTACCCTTCATTTGGCGTTC
CGCCTTTGTGGTTGCTGAACTGCATGGCCTGGCCTGGCCTGGCATTCAGTAACCAGTCTTATTT------------TTCC
TTCCAGTAGTGGTGCG-TTATCAGTA--CTATCATTCTAGTACTGAACGTTAG---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>chr3D_956
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------TATTGTCTAACAATTGTTGATGTTTTGTTTGCTAGCTCATCTGGAATGCATATCTTTGTCAAGACCCCCA
CCGGCATGACAATCCGCCTCAA---GGTCCACTCATCTGACACCCTGTACACCGTCAAGGCAAAGAT-CCAGCAGCAGTA
CTGCCTCGTCTTTGACGGGGTGTGGCTAGAAGACAACCGTACATTGGCCCATTATGGCATCCAGCATGACTCTACGATTG
ACCTCCAGGAAAAGATGCAAATCTACGTGACGGAGACGCGGGGTGGCAGGACCATCGCCCTCGAGGTCGACAGCCTAGAC
ACCATCGGCAACGTGAA-GTCCAAGATCCAGGAGATGGAGGGCTTTCCCAAGGGCCAGCAGTGCATCATCTTCGCCAACA
AACAGCTGGAGAACGACAACCGCACCTTGGCTGACCACAACATATGGAAGGAGTCCACCCTCCTCCTTGTCCTCCGCCCG
TGTAGGCCAGAAAAAAGTAGGATAATGCAGACCTTTGTC---AAGAACCTGGAAGGCAAGACCCTCACCCTTGAGGTTGG
GCAATCGGACACCATCAACAGTGTCAAGGTGAAGATCTACGAGAAGGACGCCATTCCACCTAGAAAGCAGCGCATCATTT
TTAATGGCAATCAGCTGGAGGACCACCACACCATGGCGGACTACAAGATTGGCAGGAAATCTACCCTTCATTTGGCGCTT
CGCCTTTGTGGTTGCTGAGCTGCATGGCCCGCC----------ATTTAACAACCATTTTTATTTT-GCTGGAGCC-TTCC
TTCCAGT-----------TATCAGTAAACTATCATTCTAGTACTGTACATTA----------------------------
-----------------ATAAACTACCATTCTA-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>SNPs
---S-----------S---------S---------------------------------------S--------------
-----------------------S-----------------------------------S--S----SS-----------
S--------S---------------------S------------------------------------------------
--------S---S--S----------------------------------------------------------------
-----------S----------------------------S-----------S---------------------------
-------S------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------S-----------------
---------------------S-----------------------------------------S----------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------S---
-----------------------------------------S--------S---------------------SS------
----------------------------S--S------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------S---SSSSSSSSSSSSS----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------S-----------------------------------------------------------
--------------------------------------------------------------------------------
-----------SS---------------------------------------S---------------------------
----------S-------SSSSSSSSSSSSSSSSSSSS------------------------------------------
---------------------------------------S----------------------------------------
-------------S--SS--------------------------S-----------------------------------
--------------S-----------------------------------------------------------------
----------------------------S---------------------------------------------------
----------------------------------------------------------------S---------------
-------------------------------------------------------------------------------S
--------------------------------------------------S--------------S--------------
--------------------S-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSS---S--------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSS--------------------------------------S------------------S-----------------S
---------------------S----------------------------------S-----------------------
---------------------S---------------S-------------------------------S----------
S-----------------S----S-----------------S--------------------------S----------S
--------S-----------S---S--SSSSSSSSSSSSSSSSS----------------S--------------S----
---------------------------S---S-----------------------------S--SSSSSSSSSSS
>forward_1786
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----TGGGCCCTTTCTACGTTCTTC------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>reverse_3472
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------TGGCATTGGGTAAGAGCTGG-----------------------------
---------------------------------------------------------------------------
