>input_sequence_72016
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----------------------------------------------------------------ATGGGCAAGGGCAAGG
TCCACCCGTCGCCGTCGCCGTCGGCGGCCGGCGGCGAGACGGCGGAGGGGGTGCTCCTCCGGCTGCTCCCCGCGGTCGTG
CTCGCCATGGCGGCGCCGCTGGGGCCCGAGGGGAAGGAGGTGCTCGCGTACCTCGTCCTCGCCTCGCTGCGCTCCTCGGC
GCCGCCCACGCCGGCGAGGGAGGAGCCCTCCGCGGCCGGGGAGGGGTGCGGGCGGAAGCCCCACCGCCCGGAGCTCGGGT
GCGGGTGCTTCGGGTGCTACACGGCCTACTGGTCGCGCTGGGACGGGTCCCCGGAGCGCGACCGCGAGGCGATTCACCGG
GCCATCGAGGCCTTCGACGAGCACCTGGCCCGGAAGGAGGAGGGCAAGGGTGGCCGCCGCCGCAAGAAGCGAGCAGCCTC
CTCCAAGGGCAAGGCCAAGGCGTCGGCCGCCGTTGACCCTCAGCTGCCGGAGCAGGGGGAGACCTCGGCCGCCGCGGCTC
CTGTGCTGGCGGAGGTGGTTGAAGGCGGGGAGGAGGTAGTGAAGAAGACGGTGGAGGAGGAGGAAGAAACCACCGCGGCC
TGCGCCCGCGACGACGTTCCGGAGGAGCGCAGGCGGCGGGTGTGGGGCGCGGTCGCCGGCGTGTTCAACTGGAGGGGATG
GGGCCTGTGGGGGTCCCACTAG----------------------------------------------------------
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>chr5A_1_TraesCS5A01G518200
GAATTTCAAATCAAATAATAGTAGGAAAGAGTAAAGGATTAAGGTGGCTTGTCCACTTTGATCCTTAAAAAATTCTTTTT
TTCCTTTTCTTTAACATCAGTACAGACATAAGCGCTCATATACACGCGCATACACTATGAACGCACACACACACACCCTA
CCTCTATGAGCACCTCCGAAAGACTGAGCCGGCATATCATCTTTAAATTTACAAAATCACCGTAGGCGCCTAGTCGTAAA
ATCATTGGAAATAAAACCAATATATACATGATTCTAGAAAATATAGTACCTCCATTCCTATGAAACAAATCACGTTGTAA
GAAAATATAAGCGTCAACATCAT------------ATGAGCCCTAGCCAACAGAGCTTCGGCCGATGTGTGGCTTTGTCA
GAATCGTCCATCCGCCGGCCAGACCGTCCCCACGCCATCACGGTCACAAAAGATGGTCCCGTTGCACCTAATCCACCACC
GACCCTCT-CCCTTGCGCATAAGGCCGGTTATAATGGGAAGTATCATACATATGATACTAGTCTATGATATTACTCTCTC
CGTTTCTAAATATTTGTCTTTCTGAAGGTTTCAAATGGTGACTACATACGGAGCAAAATGAGTGAATCTACACTTTAAAA
AATGTCTATATATATCCGTATGTGGTGACCATTTAAAATATCTAGAAAGACAAATATTTAGGAACGGAGGAGTATATCCC
TAATGCATAGTATCATAAGTTGGTATTATAGGAGACTAAATTTTATTGCCATGCATGATATAAAATAGCATATCATTTAA
TATGATACGGTATCATGATACGATACTCAAGCCTCTCTTTCTTTATTTAATTCTATGTCACCTCACCAAACTTGCTTAGT
TGGCATGCATGATACTTATGGGCAGCCTAATAAAACTAGTCGACCCCACCTGAA----CCCAAAAGTCGCTTAACATCGA
AGCAATCTCAGAAAGGAA-------AAAAACATCGAGAGGCTTTCGGGAGACAATCTCCAAGAAATGGGCAAGGGCAAGG
TCCACCCGTCGCCGTCGCCGTCGGCGGCCGGCGGCGAGACGGCGGAGGGGGTGCTCCTCCGGCTGCTCCCCGCGGTCGTG
CTCGCCATGGCGGCGCCGCTGGGGCCCGAGGGGAAGGAGGTGCTCGCGTACCTCGTCCTCGCCTCGCTGCGCTCCTCGGC
GCCGCCCACGCCGGCGAGGGAGGAGCCCTCCGCGGCCGGGGAGGGGTGCGGGCGGAAGCCCCACCGCCCGGAGCTCGGGT
GCGGGTGCTTCGGGTGCTACACGGCCTACTGGTCGCGCTGGGACGGGTCCCCGGAGCGCGACCGCGAGGCGATTCACCGG
GCCATCGAGGCCTTCGACGAGCACCTGGCCCGGAAGGAGGAGGGCAAGGGTGGCCGCCGCCGCAAGAAGCGAGCAGCCTC
CTCCAAGGGCAAGGCCAAGGCGTCGGCCGCCGTTGACCCTCAGCTGCCGGAGCAGGGGGAGACCTCGGCCGCCGCGGCTC
CTGTGCTGGCGGAGGTGGTTGAAGGCGGGGAGGAGGTAGTGAAGAAGACGGTGGAGGAGGAGGAAGAAACCACCGCGGCC
TGCGCCCGCGACGACGTTCCGGAGGAGCGCAGGCGGCGGGTGTGGGGCGCGGTCGCCGGCGTGTTCAACTGGAGGGGATG
GGGCCTGTGGGGGTCCCACTAGTCGGTGACGCGAGCCGATATTCCTCGTCAGTGAGATCTTTAGTTCGTTTAGCCGGTTG
GTGGGCTTGATGTTTCTGTTGGGGTTTTAGGTTTGAAATAGTCAGTCAAATCGGTATTGGATTTTTTTT--CATGTACAC
------TACTACTTGTATGTTACACTAGCACAATGATGATAATAATGGTGGTGTGGTGGTCATGTATTTGCCTCCTTGGT
GTAAATATTTGGATTTGGATGGATTCTCCACATGGTTGGTGTCATGAGTGTGTGTACATATTATGCAAATGGTGTGAATG
CCCATTTAATGGTAAGTGGTGTCATGGTTGGTTCAAGAATTTCACAGTATTTTTGTATGATT------------------
--------------------------------------------------------------------------------
-------------------------------------------------------TTTTTTCTATGTAGAATGTTCGATT
TACATGACTAGAAGCCGTATGGTTTTTGTCTAGGTCCTACGTTGTGTGCAAATTCCGTAGGAAGATTTTATTGAGTTCAA
CTTTATGAAAACTTTACTTTCTTTAAGTGATCTACATGATGTACACAATAGTTGTGCCATGGGGAAAATGCAGGATAATT
TTTAGGGGAATAGGTGTATGCCATAACTTTTATTATAAGAAAAGT-TTTTTTTCATGAGGTTGAACTCCAATTAATTTTT
TCTATAGGATTGCATGCAAAATAGGCCAGCGGAAAAATTCCTATGATCTATATTCATAGAAACCAAACATGCCAAGACAA
ACCAAATGAGCCTTGTATACCCAGACAGAAGGTATACATATGTAAAATTCCAAAGGAATAGAATCCTACAAAATTCCTTT
GAACCAAAGAAGCGCTATGTAATTTATGATTTATCTCTAACTATAATTACATAGGGTATTGCGCTTATAAAAGTAACTTG
GTGCTAGCGAGTCCAAGCATAGTTGTATGCTAATATATGCATAAGACTTGGGCCCTCTAGGTTG----------------
-----ACGGCTGACCATGACATGTCAACGAATGGTCAAGCAAGGATTACACATAAGCAGGATCTAAGCAAATGTATTTAG
AATCA
>chr4B_249
AAAAA---------------------------------------------------------------------------
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--------------AAACAATATATACATAATTCTAGAAAATCTAGTACCTTAACTCCAATG-AACAAAACACGTTGTAA
GAAAATATAAGCGTCAAAATCAT------------ATGAGCCCTAGCCAACAGAGCTTCGGCCGATTGGTGGCTTTATCA
GATGA-TCCATCCGCCGGCCAGACCGTCCCCACGCCATCACGGTCACGAAAGATCACGCC---GCACCTAACCCACTACC
GACCCTCT-AACCCGCGCATAAAAC-------------------------------------------------------
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-------------------------------------AGTCGACCCCACCTGAA----CCCAGAAGTCGCTTAACATCGA
AGCAATCCCACCAGAAAA-------AAAAACATCGAGAGGCTTTCGGGAGACAATCTCCAAGAAATGGGCAAGGGCAAGG
TCCACCCGTCGCCGTCGCCACCGGTGGCCGGCGGCGAGACGGCGAAGGGGGTGCTCCTCCGGCTGCTCCCCGCGGTCGTG
CTCGCCATGGCGGCGCCGCTGGGGCCCGAGGGGAAGGAGGTGCTCGCGTACCTTGTCCTCGCCTCGCTGCGCTCCTCGGC
GCCGCCCACGCCGGCGAGGGAGGAGCTCTCCGCGGCTGGGGAGGGCTGCGGGAAGAAGCCCCACCGTCCGGAGCTCGGGT
GCGGGTGCTTCGGGTGCTACACGGCGTACTGGTCGCGCTGGGACGGGTCCCCGGAGCGCGACCGCGAGGCGATTCACCGG
GCCATTGAGGCCTTCGACGAGCACCTGGCCCGGCAGGAGGAGGGGAAGGGTGGCCGCCGCCGCAAGAAGCGAGCGGCCTC
CTCCAGGGGCAAGGCCAAGGCGTCGGCGGCCGTTGACCCTCCGCTGCCTGAGCAGGGGGAGACCTCGGACGCCGCGGCTC
CTGTGCTGGCGGAGGTGGTTGAGGGCAGGGAGGAGGAAGTGAAGAAGACGGTGGAAGAGGAGGAAGCCACCACCGCGTCT
TGCGCCCGCGACGACGTCCCGGAGGAGCGCAGGCGCCGGGTGTGGGGCGCGGTCGCCGGCGTGTTCAACTGGAGGGGATG
GGGCCTGTGGGGGTCCCACTAGTCGGTGACGCAAGCCGATATTCCTCGCCAGTGAGATCTTTAGTTCGTTTAGCCGGTTG
GTGGGCTTGATG-TTCTGTTGGGGTTTTAGGTTTGAT-TAGTCAGTCAAATCGGTATTATATTTTTTTC--CATGTATAC
TAGTAGTACTACTTGTATGTTACACTAGCACAATGAT---AATAATGGTGGTGTGGTGGTCATGTATTTGGTTCCTTGGT
GTAAATATTTTGGTTTGATTGGGTTCTT--CATGGTTGGTGTCATGAGTATGTGTGTACGTTATGCAAATG----GAATG
TCCATTTAATGGTAAGTGGTGAAG-----GGTTCAAGAATTTTGCAGTATTTTTGTAGCATT------------------
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-------------------------------------------------------TTTT--CTACGTACAATGTTCGATT
TACATGACTAGAAGCCGTATGGTTTGTGTCT-GGTCCTACTTTGTGTGCAAATTCTATAGGAACATTTTATTGAGTTCAA
CTTTATGAAAATTTTACTTTGTTTAAGTGATCTACATGATGTACACAATAGTTGTGCCATGGGGGAAATGCAGGATT-TT
TTTAGAGGAATAGGTCTATGCCATGGTTTTTATTGAAAGAACAAAAA--TTTTCATGTGGTTGAACTC-AGTGAAATTTT
TCTATAGGATTGCATGCAAAATAGGTCAGAGGAAAAATTCATATGATTTATATCCATAGAGACCAAACATGCCATGACAA
ACCAAATGAGCCTTGTATACCTAGACAAAAGGTATACGTATGAAAAATTCCGAAGGAATAGAATCCTACAAAATTTCTTT
GAATCAAAGAAGCCCTAAGTAATTTATGATTCAACTCTAACCATAATTACATAGGGTATTGCGCTTATAAACATAACTTG
GTGCTAGCGAGTCCAAGTATAGTTGTATGCCAATATATGCATAAGACTTGAGCCTTCTAGGCTGACCTCAAATCATTTTA
GGTTGACGGCTGACCATGACATGTCAACGAGTGGTCAAGCAAGGATTACACATAAGCAGGATCTAAGCAAATGTATTTAG
AATCA
>chr4D_284
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-------------------------------------------TAGTACCTCCATTCCTATGAAACAAATCACCTTGTAA
GAAAATATAAGCGTCAAAATCACACACTCCATCGGATGAGCCCTGGCCAACAGAGCTTCGGCCGATTGGTGGCTTTACCA
GATGA-TCCATCCGCCGGCCAGGCCGTCCCCACGCCATCACGGTCACAAAAGATCACGCC---GCACCTAATCCACTACC
GACCCTCTTCCCTTGCGCATAAAAC-------------------------------------------------------
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-------------------------------------AGTCGACCCCACCTGAATGAGCCCAAAAGTCGCTTAACATCGA
AGCAATCTCACCAGAAAAGAAAAAGAAAAACATCGAGAGGCTTTCGGGAGACAATCTCCAAGAAATGGGCAAGGGCAAGG
TCCACCCGTCGCCGTCGCCGCCGGCGGCCGGCGGCGAGACGGCGGAGGGGGTGCTCCTCCGGCTGCTCCCCGCGGTCGTG
CTCGCCATGGCGGCGCCGCTGGGGCCCGAGGGGAAGGAGGTGCTCGCGTACCTCGTCCTCGCCTCGCTGCGCTCCTCGGC
GCCGCCCACGCCGGCGAGGGAGGAGCCCTCCGCGGCCGGGGAGGGGTGCGGGAGGAAGCCCCACCGCCCGGAGCTCGCGT
GCGGCTGCTTCGGGTGCTACACGGCGTACTGGTCGCGCTGGGACGGGTCCCCGGAGCGCGACCGCGAGGCGATTCACCGG
GCCATAGAGGCCTTCGACGAGCACCTGGCCCGGCAGGAGGAGGGGAAGGGTGGCCGCCGCCGCAAGAAGCGAGCTGCCTC
CTCCAAGGGCAAGGCCAAGGCGTCGGCCGCCGTTGACCCTACGCTGCCGGAGCAGGGGGAGACCTCGGCCGCCGCGGCTC
CTGTGCTGGCGGAGGTGGTTGAAGGCGGGGAGGAGGAAGTGAAGAAGACGGTGGAGGAGGAGGGAGCCACCACCGCGGCT
TGCGCCCGCGACGACGCTCCGGAGGAGCGCAGGCGGCGCGTGTGGGGCGCGGTCGCCGGCGTGTTCAACTGGAGGGGATG
GGGCCTGTGGGGGTCCCACTAGTCGGTGACGCCAGCCGATATTCCTCGTCAGTGAGATCTTTAGTTCGTTTAGCCGGTTG
GTGGGCTTGATG-TTCTGTTGGGGTTTTAGGTTTGAT-TAGTCAGCCAAATCGGTATTGGATTTTTTTTTTCATGTACAC
------TACTACTTGTATGTTACACTAGCACAATGAT---AATAATGGTG------------------------------
--------------------------------------------------TGTGTATACATTATGCAAATGGTGTGAATG
TCCATTTAATGGCAAGTGTTGAAG-----GGTTCAAGAATTTCACAGTATTTTTGTACTCCCTCCATTCCTAAATATAAG
TCTTTTTAGAGATTACACTGCGAACTACATATACGGAGCAAAATGAGTGAATCTACACTCTAAAGTTTTGCTCTGTATGT
AGTCCGTAATGGAATCTCTAAAAGGACTTATATTTAGGAACTGAGGAAGTAGGGGTTTTTTCTATGTAGAATGTTTGATT
TACATGACTAGAAGCCGAATGGTTTTTGTCTAGGTACTACGTTGTGTGCAAATTCTATACGAACATTTTATTGAGTTCAA
CTTTATGAAAATTTTACTTTCATTAAATGATCTACATGATGTACACAATAGTTGTGCCATGGGGAAAATGCGGGATT-TT
TTTAGGGGAATAGGTGTATGCCACAGTTTTTACTGAAAGAAAAGAATTTTTTTCATGAGGATGAACTC-AATGAAATTTT
TCTATAGGATT-----CAAAATAGGCCAGAGGAAAAATTCCTATGATCTATATTCGTAGAAACCAAACATGCCAAAACAA
ACAACATGAGCCTTTTATACCTACATAGAAGGTATACGTATGGAAAATTCGGAAGGAATAGAATCCTACAAAATTCCTTT
GAACAAAAGAAGCCCTAAGTAATTTATGATTCATCTCTAACTATAATTAGATAGGGTATCACACTTATGAAAGTAACTTG
GTGCTAGCGAGTCCAAGCATAGTTGTATGCTAATATATGCATAAGACTTGGGCCTTCTAGGGTGACCTCAAATCATTTTA
GGTTGACGGTTGACCACGACATGCCAACGAATGGTCAAGCAAGGATTACACATAAGCAGGGTCTAAGCAAATGTATTTAG
AATCA
>SNPs
S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSS--S------------S------------S-------------------------------------
-----------------S------------------------------------------------SS--------S---
--SSSS------------------------------------------------SSSS--SSS-------------S---
----------------------SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------------------------------
----------SS-SSS----------------------------------------------------------------
--------------------S-----------------------------------------------------------
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----------------------------------------------------S---------------------------
-------------------------S------------------------------------------------------
-----S---------------------------S----------S-----------------------------S-----
-----------------------------------------S--------------------------------------
------------------------------------S-----------------------------SS-----------S
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--------------------------------S-----------------------------------------------
------------S-----------------------SS------------------------------------------
-------------------------------------SSS------------------------------SS--------
----------S-S----SS---S----SSS-------------------S------S-S---------------------
S--------------------SSSSSSSS----------------------------SS---------------------
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-------------------------------------------------------SS------S----------------
-----------S----------------------------------------------------------------SS--
-------------------------SS-------SS--------S-----------------------S---S--S----
-----------------------------S--------------------------------------------------
---------------------S---------------S----S--------S----------------------------
-------------S---S-------------S------------------------------------------------
------------------------------------------------------S------S------------------
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>forward_144
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--------------------------------------------CGCGCATACACTATGAACGC----------------
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>reverse_1948
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---------------------------CCACATGGTTGGTGTCATGAG--------------------------------
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