>input_sequence_71987
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---------------------------------------------------------------------------ATGAG
ATCTCTCTGCTACGTGACTTTCCTGCTCATCTTGTCCATCAGCAACGTGCAACTCTCTGCATCCGTACGCCTCTTGGCCG
AAAGTCCACATGGCCAGCCAGGTGCACCGGCGCCGCTCCCTCCCGGCGGCCTGTCGGGAAACATCCCGGCTAATGTCCCG
GCGAGCATGTCAGACAACATTCCGGGGAACCTCCCTGCTAGCCTGCCAGAGAACATGCCGGTAAACCTCCCTGCCAACGT
GCCACCGGGGGTGCTTGCGAACGTGCCACCGGGGATGCTAGCCAGTGTACCACCGGAGATGCTGGCCAACCTCTCCACCA
CCATGACGCCGGCGATGCTGTCCAAGATCCCGCCGGAGGCGCTGGCCAGCATCCCGCCAGACAAGCTGCCACCAAACGTG
ACGCCAGATATGTTGGTCACCCTCGCGGCGATGAAGCAGCAGGAGCAGCAGCAGCCAGGGCAGCCTGCTGCTGGGGCATC
CAAGGGCAACGCAGCGGCGGGCTTGCCGCAGATCCCCAAGATGCCCGACTTATCGGGGCTGACGAACCTCTCGTTCCCGC
CGATGCGTTCGGCGTCCCTGCCGAAGATGCCGCAAAACCTCTCGCTCTTCGGGTTCGACGTGAAGATCCCAAAGTTCATC
AACAAGATGGTAAAGGAGAACACAGATTCCTGA-----------------------------------------------
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>chr2B_1_TraesCS2B01G267600
CACGGTGTGCGGGTTCGAATCCCAAGGGCCGCTCATTTTCTTTTTTTTTCGCTTTTTAATCGGCCCACTGACATATGGGC
CCTATATCGACGTCACGGCCCATGTTTTGTTCTGGTGGCTTGCGTTTTTCTCTCGACCCACGTGTCTCCTACGCAAATAC
GAGATACATATGCAACGTGTAGAGCCAGGACTGTTGTTTCAACCTCAGGGACCGTATTGATTATGTATTTTCATGTACCG
GAACCGTATTGAAGCAATACGCAAGTTTCAGAATCAAGTTGGACGTCGCCAGCGATTACGAGGACTATAGATGCAATTAT
CTCGTCAAACAATGATGTTGGCTTTTAGTTCCAAGTCAACGCTTACATGCATGCCTTATCTGTCATAATGACGCTCAGTT
TTGACCAAGTGAGCGGTCAGAGTTTTTTTCTTGCAAAAGTTAGGCGTAATGCCTGTAGGTTTGCAAAATGTTATTAAGTG
GTGGTTATTTGAAACCTAACCACATTTTTGATGGTTTTATGCTCTCTACTCAACTTTGAACGTACAAACTATGTTGAGAA
ATTTTTTT--GGGGAGTAAATTCTGTTGAGAAATTGAGAACATGTGATGT--------------------------GTCG
GAGTGTGATATTATAGCTTAAGAACAAGATAAAAATAAAACTATCTAGAACATGAAAA--AAAT-CCCTGAGAAATTACA
TATGTGAAATTGCCTTCAACAGCATGCAAATAATTCAT-GTTCCTAACCCTGCCCAACGTTTTTCAAACCTAGC-TATAT
CTAGCG-CTACGCCTATATTTGGCTTTTATTTTGTTCTAAAAATATCTGCCTTCGTTGCTAGTTCAGCGTGCG-TCCCCC
CATACATTTAGGCTCTCCATCTCACTAAATTTAGGGTCTTGTCTAGTCATATCCTTTCTTGATATATATCCGCAACAGTT
CTTCATCTTTTCTTGCAAATTTAGTCAATATTTTGCCAGGTTTTTGGAATCCTCAATTCCATGAGGGAAGTCACGATGAG
ATCTCTCTGCTACGTGACTTTCCTGCTCATCTTGTCCATCAGCAACGTGCAACTCTCTGCATCCGTACGCCTCTTGGCCG
AAAGTCCACATGGCCAGCCAGGTGCACCGGCGCCGCTCCCTCCCGGCGGCCTGTCGGGAAACATCCCGGCTAATGTCCCG
GCGAGCATGTCAGACAACATTCCGGGGAACCTCCCTGCTAGCCTGCCAGAGAACATGCCGGTAAACCTCCCTGCCAACGT
GCCACCGGGGGTGCTTGCGAACGTGCCACCGGGGATGCTAGCCAGTGTACCACCGGAGATGCTGGCCAACCTCTCCACCA
CCATGACGCCGGCGATGCTGTCCAAGATCCCGCCGGAGGCGCTGGCCAGCATCCCGCCAGACAAGCTGCCACCAAACGTG
ACGCCAGATATGTTGGTCACCCTCGCGGCGATGAAGCAGCAGGAGCAGCAGCAGCCAGGGCAGCCTGCTGCTGGGGCATC
CAAGGGCAACGCAGCGGCGGGCTTGCCGCAGATCCCCAAGATGCCCGACTTATCGGGGCTGACGAACCTCTCGTTCCCGC
CGATGCGTTCGGCGTCCCTGCCGAAGATGCCGCAAAACCTCTCGCTCTTCGGGTTCGACGTGAAGATCCCAAAGTTCATC
AACAAGATGGTAAAGGAGAACACAGATTCCTGAAGGAAAGCAA-GCTTCTTTGTTGATGGTGCATGCACGAGCACGACAT
GGTTTGATCCCAAGGCCAAGCTTGCCTTG-GGAGACTTCTCAATGTTGCTGCCATGAGTTGTATCTGTATTTTCTGATGA
AAGAGTTGCTTGCATATTGCCAAATTCGTACCTTACGACGGGAGCAAAGTGATTAGAAGATGTAAAAATAGGAATAAATC
GATATTGTATTCGTCTCAGAAATCCTTTGCATGCGATTTTTTTTCTTTCAGATAACTGCACGCACCA--------TGTGT
TACATCTACGGGGAAGGGATTATTGAATTCCGTGAGCAGTAATGCTGCATCTACGTAAAACACAAACATAAAGTAACGTA
AACAGCGACGTGGTGGGCTGGGATTGAAGAGAGGGGGAGGAAGGGGCCCACCCCCGGTTAAAATCGGGGTGGGGGGGGGA
GGATTTAGTTTAGTCAAGTTACGTAAGCTTTCGTAACGCTTTACGTAGATGGAGCATTACTGTTCGGTGAGCGGCCTCTG
GCGATAGTCATGGCGAATGGGCGGCTCTAGGGCCCTCGT-CCCATGGCCGTCTCCGGCGCCTCAGCGGCCGACGGGCAGT
CCGCCACA-CCTCTCCCTCCTTCGTGCCTTCCTCCGTCCCCGCACCATCCTCGTGGAGACCGCGCCGCCCCCCTTCTCCT
GGGCCGATGTGGCC------GAGGAAGAGGATGCCAACGGGCCAAGCGAGGAGCCCTCGAAGCTGTCGCCTGTGCAGACC
CTAGGGGACTTCCTCATGCCAGCTCGGTCAATCCTTGGCTGGAGGCAATCCTCCT-TTTTTAAAAGAAAAAAAAGCTCGG
TTAATCCGGCGGCCAAATGGTGTGTGTGGTTAGACCGGAGCGCGCGAGGCTGCAGCTGCCGCGTGAGAGGCATGCTTCTC
TCGTGGACGGATCTCGTTGCCGGGATGAGATCTAGTGCCTTGCTGTGAGCAAGGCATCGATGAACAGTACGTTAACTGGC
CCCCTCTCTCCA
>chr2A_317
TTAACT--------------------------------------------------------------------------
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---GTCAAACAATGGTGTTGGCTTTTAGTTCCAAGTCAACGCTTATATGCATGCCTTACCTGTCATAATGACGCTCAGTT
TTGACCAATTGAGTGGTTGGAGTTTTTTTCTTGCAAAAGTTAGGCGTAATGCCCGTACGTTTGCAAAATGTTATTAAGTG
GTGGTTATTTGAAACTTAATCACATTTTTGATGGTTTTATGCTCTTTACTCAACTTTGAACGTACAAACTATGTTGAGAA
CTTTTTTT--GGGGAGTAAATTCTGTTGAGCAATTGAGAACATGTGATGTGTTTGGTCCTTATTGAGTACAGTTGAGTCG
GAGTGTGATATTATAGCTTAAGAACAAGATAAAAATAAAACTATCTAGAACATGAAAA--AATAACCCTGATAAATTACA
TATGTGAAATTGCCTTCAACAGCATGCAAATAATTCAAAGTTCCTAACCGTGCCCAACGTTTTTCAAACCTGGCATATAT
CTAGCG-CTACGCCTATATTTGGCTTTTATTTTGTTCTAAAAATATCTGCCTTTGGTGCTAGTTCAGCGTGCG-TTCCCC
CATACATTTAGGCTCTCCATCTCACTAAATTTAGGGTCTTGTCTAGTCAAATCCTTTCTTGATATATACCCGCAACAGTT
CTTCATCCTTTCTTGCAAATTTAGTCCATATTTTGCCAGGTTTTTGGAATCCTCAATTCCATGAGGGAAGTCACGATGAG
ATCTCTCTGCTACGTGACTTTCCTGCTCATCTTGTCCATCAGCAAGGTGCAACTCTCTACATCCGTACGCCTCTTGGCCG
AAAGTCCACATGGCCAGCCAGGTGCACCGGCGCCGCTCCCTCCCGGCGACCTGCCGGGAAACATCCCGGCTAATGTCCCC
GCGAGCATGTCAGACAACATTTCGGGGAACCTCCCTGCTAGCCTGCCAGAGAACATGCCGGTAAACCTCCCTGCCAACGT
GCCACCGGGGGTGCTTGCCAACGTGCCACCGGGGATGCTAGCCAGTGTACCACCGGAGATGCTGGCCAACCTCTCCACCA
CCATGACGCCGGCGATGCTGTCCAAGATCCCGCCGGAGGCGCTGGCCAGCATCCCGCCAGACAAGCTGCCACCAAACGTG
ACGCCAGATATGTTGGTCACCCTCGCGGCGATGAAGCAGCAGGAGCAGCAGCAGCCAGGGCAGCCTGCTGCTGGGGCATC
CCAGGGCAACGCAGCGGCGGGCTTGCCGCAGATCCCCAAGATGCCCGACTTATCGGGGCTGACGAACCTCTCGTTCCCGC
CGATGCCTTCGGCGTCCCTGCCGAAGATGCCGCAAAACCTCTCGCTCTTCGGGTTCGACGTGAAGATCCCAAAGTTCATC
AACAAGATGGTAAAGGAGAACACAGATTCCTGAA-GAAAGCAA-GCTTCTTTGTTGATGGTGCATGCACGAGCACGACAT
GGTTTGATCCCAAGGCCAAGCTTGCCCTGAGGAGACTTCTCAATGTTGCTGCCATGAGTTGTATCTGTATTTTTTGATGA
AAGAGTTGCTTGCATATTGCCAAATTCGTACGTTACGACGGGAGCAAGGTGATTAGAAGATGTAAAAATAGGAATAAATC
GATATTGTATTCGTCTCAGAAATCCTTTGCATGCGAT---TTTTATTTCAGATAACTGCACACACTATGTGTTAGTGTGT
TACATCTACGGGGAAAGGATTATTGAA-----------------------------------------------------
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--------------------------------------------------------------TTCGGTGAGCGGCCTCTC
GCGATAGTCATGGCGAATAGGCGGCTCTAGTGCCCTCGTCCCCATGGCCGTCTCCGGCGCCTCAGCGGCCGGCGGGCGGT
CCGCGGCACCCTCTCCCTTCTTCGTGCC---------------ACCATCATCGTGGAGACCGCGTCGCCCCCCTTCTGCT
GGGCCAATGTGGCTGAGGCTGAGAAAGAGGATGCCAACGAGCCTAGCGAGGAGCCCTCGGAGCTGTCGCCGGTGCAGACC
CTAGGGGACTTCCTCGTGGCAGCTCGGTCAATCCTTGGCTGGAGGCAATCCTCCTCTTTTAAAAGAAAAAAAAAGCTCGG
TCAATCCGGCGGCGAAAGGGTGTGCGTGGTCAGACCGGAGCGCGCGAG--------------------------------
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>chr2D_324
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---GTCAAACAATGGTGTTGGCTTTTAGTTCCAAGTCAACGCTTACATGCATGCCCTTCCTGTCATAATAACGCTCAGTT
TTGACCAAGTGAGCGGTCAGAGTATTTTTCTTGCAAAAGTTAGGCGTAATGCCCGTAGGTTTGCAAAATGTTATTAAGTG
GTGGTTATTTGAAACTTAACGACATTTGTGATGGTTGTATGCTCTTTACTCAACTTTGAACGTACAAACTATGTTGAGAA
TTTTTGTTTGGGTGAGTAAACTCTGTTGAGAAATTGAGAACATGTGATGTGTGTAGTCCTTATTGAGTACAGTTGAGTCG
GAGTGTGATATTATAGCTTAAGAACAAGATAAAAATAAAACTATCTAGAACATGAAAAAAAAAT-CCCTGAGAAATTACA
TATGTGAAATTGCCTTCAACACCATGCAAATAATTCCT-GTTTCTAACCGTGTCCAACGTTTTTCAGACCTGGC-TATAT
CTAGGCACTACGCCTATATTTGGCTTTTATTTCGTTCTAAAAATATCTGGCTTCGGTGCTAGTTCAGCGTGCGTTCCCCC
CATACATTTAGGCTCTCCATCTCACTAAATTTAGGGGCTTGTCTAGTCATATCCTTTCTTGATATATACTCGCAACGGTT
CTTCATCTTTTCTTGCAAATTTAGTCCATATTTTGCCAGGTTTTTGGAACCCTCAATTCCATGAGGGAAGTCACGATGAG
ATCTCTCTGCTACGTGACTTTCCTGCTCATCTCGTCCATCAGCAGCGTGCAACTCTCTGCATCCGTACGCCTCTTGGCCG
AAAGTCCACATGGCCAGCCAGGTGCACCGGCGCCGCTCCCTCCCGGCGGCCTGCCGGGAAACTTCCCGGCTAATGTCCCC
GCGAGCATGTCAGACAACATTCCGGGGAACCTCCCTGCTAGCCTGCCAGAGAACATGCCGATAAACCTCCCTGCCAACGT
GCCACCGGGGGTGCTTGCGAACGTGCCACCGGGGATGCTAGCCAGTGTACCACCGGAGATGCTGGCCAACCTCTCCACCA
CCATGACGCCGGCGATGCTGTCCAAGATCCCGCCGGAGGCGCTGGCCAGCATCCCGCCAGACAAGCTGCCACCAAACGTG
ACGCCAGATATGTTGGTCACCCTCGCGGCGATGAAGCAGCAGGAGCAGCAGCAGCCAGGGCAGCCTGCTGCTGGGGCATC
CCAGGGCAACGCAGCGGCGGGCTTGCCGCAGATCCCCAAGATGCCCGACTTATCGGGGCTGACGAACCTCTCTTTCCCGC
CGATGCCTTCGGCGTCCCTGCCGAAGATGCCGCAAAACCTCTCGCTCTTCGGGTTCGACGTGAAGATCCCAAAGTTCATC
AACAAGATGGTAAAGGAGAACACAGATTCCTGAA-GAAAGCAAAGCTTCTTTGTTGATGGTGCATGCACGAGCACGACAT
GGTTTGATCCCAAGGCCAAGCTTGCCCTGAGGAGACTTCTCAATGTTGCTGCCATGAGTCGTATCTGTATTTTCTGATGA
AAGAGTTGCTTGCATATTGCCAAATTCGTACGTTACCACGGGAGCAAGGTGATTAGAAGATGTAAAAATAGGAATAAATC
GATATTGTATTCGTCTCAGAAATCCTTTGCATGCGATTTTTTTTCTTTCAGATAACTGCACGCACCA--------TGTGT
TACATCTATGGGGAAGGGATTATTGAA-----------------------------------------------------
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--------------------------------------------------------------TTCGGTGAGCGGCCTCTG
GCGATAGTCATGGCGAATGGGCGGCTCTAGGGCCCTCGTCCCCATGGCCGTCTCCGGCGCCTCAGCGGCCG---------
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>SNPs
SSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSS-----------S-------------------------------------------S---------------------
-----------------------------------------------------S--------------------------
---------------S-----------------------------S----------------------------------
S-------------------------------------------------------------------------------
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-------------------------------------------------S---------------------S--------
-------------------------------------------------------S------------------------
--------------------------------------------------------------------S-----------
--------------------------S-----------------------------------------------------
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-----------------------------------------------------S-------------------------S
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-S------------------------------------------------------------------------------
------S-------------------------------------------------------------------------
----------------------------------S---------------------------------------------
--------------------------S-----------------------------------------------------
-------------------------------S---------------S--------------------------------
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---------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------
-----------------------------------------------------------------------S-----S--
----SS------------S---------SSSSSSSSSSSSSSS------S--------------S------------S--
-----S-------S---------S---------------S---S---------------S----------S---------
---------------S--S-----------------------------------------S---SS--------------
-S-----------S---S------S-----S-----------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSS
>forward_115
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---------------CGGCCCATGTTTTGTTCTGG---------------------------------------------
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>reverse_2105
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------------------------TGAAGAGAGGGGGAGGAAGG------------------------------------
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