>input_sequence_71977
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---------------------------------------ATGAAGCTTCAGGTAGCCACAGTCGCCTCCTTCCTCCTGGT
GGCCTTGGCCGCGACGGCCCAGGCCGTGACGTTCGACGCGTCGAACAAGGCGTCGGGCACCTCCGGCGGCCGGCGGTTTG
AGCAGGCCGTCGGCCTCCCATACTCCAAGAAGGTCCTCTCCGACGCCTCCGCCTTCATCTGGAAAACCTTCAACCAGCGC
GGCGTCGGCGACCGCAAGCCTGTGGATG------CCGTCACCCTCGTCGTCGAGGACATCAGCGGCGTCGCCTTCACCAG
CGCCAACGGCATCCACCTCAGCGCCCAGTACGTCGGCGGCAT---CTCCGGCGACG---TCAAGAAGGAGGTGACCGGCG
TGCTGTACCACGAGGCGACGCACGTGTGGCAGTGGAACGGGCAGGG---CAGGGCGAACGGCGGGCTCATCGAGGGCATC
GCCGACTACGTGCGGCTCAAGGCCGGGTTCGCGCCGGGGCACTGGGTGAAGCCGGGGCAGGGCGACCGGTGGGATCAGGG
GTACGACGTCACGGCGAGGTTCCTCGACTACTGCGACTCGCTCAAGCCCGGGTTCGTCGCGCAGCTCAACGCCAAGATGA
AGAGTGGGTACACCGACGACTTCTTCGCGCAGATTCTCGGGAAGAACGTGCAGCAGCTGTGGAAGGACTACAAAGCCAAG
TTTAGAGGCTGA--------------------------------------------------------------------
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-------------------
>chr1B_1_TraesCS1B01G183100
AAAAT-TGGATAGATTCAAACTCTTTTTCTTATGGA-AGAATGTTCACCTTTCTTGCACACTTTATTTTTGTCTCA--GA
GTCAAAGGTGAATTTTCTACCCACTGTTTATATTACCTCTACTTCATCATAAAGTACCCCCTCCGTCCTCAAATAAATAC
AAAACATTGTATTAAATTTACTATAAAGTTTGTTCAATATTGAATCACTTATTTTGAGACAGAGGAAGTAACAAGTAACA
GTACATATTTTATCATCTCACTAGTCC-----------------------------------------------------
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---------------------------------------------------------CATTATATGTCTGGTTACTCCAA
ACC-TGAAAAAGTAACAGTACAGATTTTACTAACGGCTAGTTGCTTCAAACTTTGAAAAAGTATTTCTTTATGTTTTTTA
TGTGTGTTC------------------------------------CTATCCTGTAAATCAAATGACATTTCATTTTCTAT
GATCTCAGCACTCATAGGATTCAAGATACATGCACCATATTTTCTATACTTTTTCTATTCCTATGCAATTCATATCCTAC
GAACCAGAGATAGCCTAAAGTTAGGATAAGGCAGGGAGAAGAGCGGTGG------GCAAGCCCCACGGGTGCACGTGTCA
CGCAACAGAGGCGGCTTGCGCGGCGAGAAATCAGCCGGTCTAAAAGGATACTTTTCCGTGATCTAATGGATAAACAAAGA
TAATATGGCTTGTAGTGCAGATAAGGCTTGTAGTGCATTCGTGCTTGAAGAAATCAGGAGACAAACGGACAAGTATGTGC
GACTTTTTCATTTGAAGACAACGTGATCCTCCGAACTTTCTTGCATCACATTTTTTATACATTTCTTTATTTTATA-AAA
ATAAACAGTAGAAGGATTGTTCTACGGTCCATGGTCGAAGAAAAAAAGGAGACGAAGTCAAGTCAATTCTTTTGACTGAG
CTTTCACTACCATCAGGCATCGACACCCTATATATAATCCCATAGCACAGGCAGC-AAATCACATCCACACCACTAGCTC
AGCGACACAGGCCTGCAAGCCTGCAACACCCGCTACAAAATGAAGCTTCAGGTAGCCACAGTCGCCTCCTTCCTCCTGGT
GGCCTTGGCCGCGACGGCCCAGGCCGTGACGTTCGACGCGTCGAACAAGGCGTCGGGCACCTCCGGCGGCCGGCGGTTTG
AGCAGGCCGTCGGCCTCCCATACTCCAAGAAGGTCCTCTCCGACGCCTCCGCCTTCATCTGGAAAACCTTCAACCAGCGC
GGCGTCGGCGACCGCAAGCCTGTGGATG------CCGTCACCCTCGTCGTCGAGGACATCAGCGGCGTCGCCTTCACCAG
CGCCAACGGCATCCACCTCAGCGCCCAGTACGTCGGCGGCAT---CTCCGGCGACG---TCAAGAAGGAGGTGACCGGCG
TGCTGTACCACGAGGCGACGCACGTGTGGCAGTGGAACGGGCAGGG---CAGGGCGAACGGCGGGCTCATCGAGGGCATC
GCCGACTACGTGCGGCTCAAGGCCGGGTTCGCGCCGGGGCACTGGGTGAAGCCGGGGCAGGGCGACCGGTGGGATCAGGG
GTACGACGTCACGGCGAGGTTCCTCGACTACTGCGACTCGCTCAAGCCCGGGTTCGTCGCGCAGCTCAACGCCAAGATGA
AGAGTGGGTACACCGACGACTTCTTCGCGCAGATTCTCGGGAAGAACGTGCAGCAGCTGTGGAAGGACTACAAAGCCAAG
TTTAGAGGCTGAACGCACGATAAGTTGATGGGTCATTCACGGTGTGATGGCATAACGCACTACTTCGAATAAGACGTGTG
TGATGGCATAACACACTATATATACTGAAATGATCAACAGAACATGTACCTTACGCTCTATAGTGAAAGATAAATAAACG
ATTTCACTAATTCGAAATCGACTTTGAGTTACATGTTACTGGT---CTTAAGTTGGCGATACGTGAGTGCGTTTGTGCGG
TGGTGTGA--GTGTGCGTGTTGTAATCGGTTTTCTAGAAAAAACAAAAGG------------------------------
--TTGTTTGGACTTGGAAAGTTTTAAAGCTGTTTGCGCACAACATGCTTGGATGGGTGGATTCAAAACCGCTCTGCGTAC
CACGATTTTTTGTCCTATATTTGTAGAACTAGACAGTGAAGACATGCAGCATGTTATGGCCCACAAACTGGATCAACTCT
GATTGTACTAGTGTTGGATACAAATTCATGATATG-------TAGTGGCAGCTAGTTTTGAAATAGAAAACCCTGGAAAT
TAGGTTTTGTTGGATGTAGCCCATTTT--AGATTGTTTTGTGGTGAATTTGATTCCAATAATCGAATTCGTTTTTGATTC
TTTGATTTGCAATT-GGTGTTTGATTGATGGCAAGTAGGTCGAAGCTGGAAGAGGGCGATGGATTTGTTTTGCGCCGGGG
ATGAGCTTTTGCTGGCCAAGTGCCACGAGATATACACCTGGTTTCCGAGCGTGAAATCTCTCGTGATGCACTCACTGAGC
CTGGCGTTGGAAGTTGTCGGCGTTCTGGATACGGGGTATCCAGACTTGCCTGCCTGCGGCCCACTGCGTGGCTCCATCAA
CGGCCTGATACGACCCAGCTTCAGCATCGACAACTCAAGACCTTCGGGAGGGGCCAAGCCTCGCGAGGCGGACGACGCTA
AGACCTCCAAGGGGTCCGGCCTCCTCAGGATGGCTTCCGAGAAGCGGAGACTTATATGCAAGGTGCACCTCACGAGGCTC
AGTTGACGTGAGCCATGAC
>chr1D_1
AAATATTGGGTGGATTCAAACTCTTTTTCTTATGAGCAGAATGTTCACCTTTCTTGCACACTTTATTTTTGTCTCAAAGA
GTCAAAGGTGAATTTTCTACTCACTGTTTATATTACCTCTACTTCATAATAAAGTACTCCCCCCGTCCTAAAATAAATAC
GAAACATTGTATTAAATTTACTATAAAGTTTGTTCATTATTGAGTCCCTTATTTTGAGACGGAGGGAGTAACAAGTAACA
GTACAGATTTTATCATCTCACTAGTCCCATTATGATGCGGCCACGATTAATGTCAGTGTTCTCACTATTTATAAAAGTTT
TCCACAGGTCAATGAATTAGAGCGCAGAAATTTATACATACCAAAATACAATAGTTTTGGTGAGAACTACCATGAGAAGG
TTGCATGCCTAGTTGAAGTCGTGTGCATGCATTCTAGTTGGTTGCATGGTACAGATCAAGCAAAGAAAGGTCGGCTACAT
GCATGCATGCCAGTTTGCCAGGGAAACAAATTACTAGGAAGGCAATATACACGGGACTCCTACAAGTATGAATCATTAAG
TGATGAAGCTAATTCTTTTTCTGAGATCCCGAGAGCACCAGCACAGATATTGCGCCAAAAAATTTGGGAAGCAAACACAT
ATATATTAATCAGAAGGAAATCAAAGATTGCATCTGTTGTTAAAAATAGAGAGCGGAATTACTACTACTTCTGTTGGGGT
CGACCATCAGAAAAGATCACGAGCATCAGGAAGTTACTCACGTGGATTTTTACATGTTTAAAGGAGATTGGATGGGGCCC
ACCAAGCTTGCCGATCCTGGAGTTAGTTTAAACTAAGAAAGAGTCTACAGATTAGGAAATATGTGTACGTGTGTCTTTTG
GAAACCTTTTAGGTGTGCGTGTGTTTCAAGTTGGCTACTTCTATAAAGCCTAGGTGTGCGTCGTTGTAAAGAGGTCAGGT
TATATTTCGATAATAAACACGATGTGTTTTTAGGGTAATACCCGTATCGAGTTTTGGGGGAAGCTGTCTAAAAATCCCTA
AGTTTTGAAGGAAGCTATAGAAAATCTCTGTGTCGCGATTTCTCTGTGAGAAAATTGTTTTATGCGTGAGTACCGTCATT
GAGATTGGTTTTCTCGTGCTGAGCCGCAAGGTTCAAACCCTCTATTTCGTGTACATAGTGTGCGCGGGCAAGAGGTTACT
GCTGCTGCTGGTGTGTCATGAAAGATCGGGCCGCCACAACAGATCAGATCTCACCATCGAGGTTTGGTCTATATCAGGTG
GTATCAGAGCATCAGGTTGTTCACGACACTATGAAGAAGATGGCGAGCGCATCGTTATTCAGTAAGTTAAGCTATGGATT
TCAGTTGGAGGAGGAAGGTCGATGGGATGGGTTTTTCATACTCGAGTTGTGGTACAGGAGAGATCTTGTGCCATGACAAT
TGACCACATGAGTTTGATCAATGCTGCAAGCATCGAGATGGTGGAGAAGCTAGATCTACCAATGACACCACGAGCACAAC
CATACTTGTTTCGTTGGGGTCATGAAGAGCTCAGTGTCACACATCAAACAAAGGTACCGTTTTTGCTAGGAAAATATTTT
TGCACGGTTTTGTGTGACGTGATTCCGGCGCCGATGGTTTCATGTCACTTATTGTTGGGCAAGCCATGGTACAAAGAGCA
TGATGTTGTATGTGATTGTCAAACGCAGATATATACTGTCAAGAAGGGTAAGAAGTACGACCTCGTGCCCATGGGTCTGG
ATCGTTTTATTGCTTGGAGGGAAGAACATCTTAAGAAGATAAGAGAGCAAAAAGAAGAAGAAGAGAAAAAGGTCGAAGGT
GCTAAAAATTTGACGGTCATCGTTCAATCTGCACATGAACATATTACTGAAGAGATTGACTCAAAACCGAGGACGGTTTC
GCTTTAAGGAGGAGAGGATGATGCGGCCACGATTAATGTCAGTGTTCTCACTGTTTATAAAAGTTTTCCACATGTCAATG
AATCAGAGCGCAGAGATTTATACATACCAAAATACAATAGTTTTGATGAGAACTACCAGGAGAAGATTGCATGCCTAGTT
GAAGTCGTGTGCATGCATTCTAGTTGGTTGCATGGTACGGATCAAGCAAAGAAAGGTCGGCTACATGCATGCATGCCAGT
TTAGAAACAAATTACTAGGAAGGCAATATACACGGGACTCCTACAAGTATGAATCATTAAGTGATGAAGCTAATTCTTTT
TCTGAGATCCCGAGAGCACCAGCACAGATATTGCGCCAAGAAATTTGGGAAGCAAACACATATATATTAATCAGAAGAAA
ATCGAAGATTGCATCGGTTGTTAAAAATAGAGACCGGAATTACTACTACTTCTGTTGGGGTCGACCACCAGAAAAGATCA
CGAGCATCAGGAAGTTACTCACGTGGATTTTTACATGTTTAAAGGAGATTAGATGGGGCCCACCAAGCTTGCCGATCCAG
GAGTTAGTTTAAACTAAGAAAGAGTCTACAGATTAGGAAATATGTGTACGTGTGTCTTTTGGAAACCTTTTAGGTGTGCG
TGTGTTTCAAGTTGGCTACTTCTATAAAGCCTAGGTGTTCGTCGTTGTAAAGAGGTGAGGTTATATTTTGATAATAAACA
CGATGTGTTTTTAGGATAATACCCGTGTTGAGTTTTGGGGGAAGCTGTCTAAAAATCCCTAAGTTTTGAAGGAAGCTATA
GAAAACCTCTGTGTTGCGATTTCTCTGTGAGAAAATTGTTTTGTGCGTGAGTACCGTCATTGAGATTGGTTTTCTCGTGC
TGAGCCGCAAGGTTCAAACCCTCTATTTCGTGTACATCACGTGCGCGGGCGAGAGGTTACTGTTGCTGCTGGTGTGTCAT
GAAAGATCGGGTCACAACAACAGATCAGATCTCACCATCGAGGTTTGGTCTATATCACATTATATGTCTAGTTACTCCAA
ACTTTGAAAAAGTAACAGTACAGATTTTACTAACGGCTAGTTGCTTCAAACTTTGAAAAGGTATTTCTTTATGTTTTCTA
TGTGCGTTAGGGTCTAAGCACTCATAGCTTTGAAAAAGTATTTTGCTATCCTGTAAATCAAATGACATTTCATTTTCTAT
GGTCTGAGCACTCATAAGATTTAAGATACATGCACCACATTTTTTATACCTTTTCCATTCCT-TGCAATTCGTATTCTAT
GAACCAGAGATAGCCTAA--------------------------------------------------------------
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>chr1D_500
TAGTCT--------------------------------------------------------------------------
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-----------------AAGTTAGGATAAGGTGGGAAGAAGAGCGGTGG------GCAAGCCCCGCGGGTGCATGTGTCA
CGCAACAGAGGCGGCTTGCGCGGCGAGAAATCAGCCGATCTAAAAAGATAGTTTTCCATGATCTAATGGATAAACAAAG-
--ATATGGCTTGTAGTGCAGATAAGGCTTGTAGTGCATTCGTGCTTGAAGAAATCAGGAGACAAACGGACAAGTATGTGC
GACTTTTTCATTTGAAGACAACGTGATCCTCCGAACCTTCTTGCATCACATT-----------------------ATAAA
ATACACAGCAGAAGTATTGTTCTACGGTCCATGGTTCAAGAAAAATAGTAGACGAAGTCAAGTCAATTCTTTTGACTGAG
CTTACACTACCATCAGGCATCGGCACCCTATATATAATCCCATAGCACAGGCAGC-AAATCACATCCACACCACTAGCTC
AGCGGCACAGGCCTGCAAGCCTGCAACACCCGCTACAAAATGAAGCTTCAGGTAGCCACAGTCGCCTCCTTCCTCCTGGT
GGCCTTGGCCGCGACGGCCCAGGCCGTGACGTTCGACGCGTCGAACAAGGCGTCGGGCACCTCCGGCGGCCGGCGGTTCA
ACCAGGCCGTCGGCCTCCCGTACTCCAAGAAGGTCCTCTCCGACGCCTCTGCCTTCATCTGGAAAACCTTCAACCAGCGC
GCCGCCGGCGACCGCAAGCCTGTCGATG------CCGTCACCCTCGTCGTCGAGGACATCAGCGGCGTCGCCTTCACCAG
CGCCAACGGCATCCACCTCAGCGCCCAGTACGTTGGCGGCAT---CTCCGGCGACG---TCAAGAAGGAGGTGACCGGCG
TGCTGTACCACGAGGCGACGCACGTGTGGCAGTGGAACGGGCAGGG---CAGGGCGAACGGCGGGCTCATCGAGGGCATC
GCCGACTACGTGCGGCTCAAGGCCGGGTTCGCGCCGGGGCACTGGGTGCGGCCGGGGCAGGGCGACCGGTGGGATCAGGG
GTACGACGTCACGGCGAGGTTCCTGGACTACTGCGACTCGCTCAAGCCCGGGTTCGTCGCGCAGCTCAACGCCAAGATGA
AGAGTGGGTACACCGACGACTTCTTCGCGCAGATTCTCGGGAAGAATGTTCAGCAGCTGTGGAAGGACTACAAAGCCAAG
TTTAGAGGCTGAACACACGTTAAGTTGATGGGTCCTTCACGGCGTGATGGTATAACGCACTACTTCGAATAAGACATGTG
TGATGGCATAACACACTATATATACTGAAATGATCAACAGAACATGTGCCTTACGCTCTGTAGTGAAAGACAAATAAACG
ATTTCACTAATTCGAAATCAACTTTGAGTTACATGTTACTAGC---CTTAAGTTCGCGATACGTGAGTGCGTTTGTGTGG
TGGTGTGAGTGTGTGCGTGTTGTAATCAGTTTTCTAGAAAAAACAAAAGGTTTTTGCAAAAAAAATTAGAAAAAACAAAA
GGTTGTTTGGACTTGGAAAGTCTTAAAGCTGTTTGCGCACGACATGCTTGGATGGGTGGATTCACAACCGCTCTGTGTAC
CACCATTTTTTGTCCTATATTTGTAGGACTAGACAGTGAAGACATGCAGCATGTTATGACCCACAAACTGGATCAACTCT
GATTGTACTAGTGTTGGATACAAATTCATCGTATTATA---CTAGTGGCAGCTAGTTTTGAAATAGAAAACCCTACAAAT
TAGGTTTTGTTGAATGTAGCCCATTTT--AGATCGTTTTGTGATGAATTTGATTCCAATAATCGAATTCATTTTTAATTC
TTTGATTTGCAATTTGGTGTTTGATTGATGGCAAGTAGGTCAAAGCTGGAAGAGGGCGATGGATTTGTTTTGCGCCGGGG
ATGAGCTTTTGCTGGCCAAGTGCTAGGAGATATGCACCTGGTTTTCGAGCTCGAAATCTCTCGTGATGCACTCACTGGGC
CTCGCGTTGGAAGT------------------------------------------------------------------
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>chr1A_507
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-----------------AAGTTGGGATAAGGCA-GGAGAAGAGCGGTGGCATTTGGCAACCCCCACAGGTGCACGTGTCA
CGCAACAGAGGCGGCTTGCGCGGCGAGATATCAGT---------------GTTTTCCAGGATCTGATGGATAAACAAAG-
--ATATGGCTTGTAGTGCAGATAAGGCTTGTAGTGCATTCGTGCTTGAAGAAATCAGAAGACAAACGGACAAGTATGTGC
GACTTTTTCATTTGAAGACAACGTGATCCTCCGAATTTTCTTGCATCACATTTTTTATATATTTCTTTATATTTTATAAA
ATACACAGTAGAACGATTGTTCTACAGTCCATGGTTCAAGAAAAAAAGTAGACGAAGTCAAGTCAATTATTTTGACTGAA
CTCACCCTACCATCAGGCATCGGCACCCTATATATAATCCCGTAGCACAGGTAGC-AAATCACATCCACACCACTAGCTC
AGCGACACAGGCCTGCAAGCCTGCAACACTCGCTACAAAATGAAGCTTCAGGTAGCCACAGTCGCCTCCTTCGTCCTGGT
GGCCTTGGCCGCGGCGGCCCAGGCCGTGACGTTCGACGCGTCGAACAAGGCGTCGGGCACCTCCGGCGGCCGGCGGTTCA
ACCAGGCCGTAGGCCTCCCATACTCCAAGAAGGTCCTCTCTGACGCCTCCGCCTTCATCTGGAAAACCTTCAACCAGCGC
GCCGTCGGCGACCGCAAGACTGTCGATG------CCGTCACCCTCGTCGTCGAGGACATCAGCGGCGTCGCCTTCACCAG
CGCCAACGGCATCCACCTCAGCGCCCAGTACGTCGGCGGCAT---CTCCGGCGACG---TCAAGAAGGAGGTGACCGGCG
TGCTGTACCACGAGGCGACGCACGTGTGGCAGTGGAACGGGCAGGG---CAGGGCGAACGGCGGGCTCATCGAGGGGATC
GCCGACTACGTGCGGCTCAAGGCCGGGTTCGCGCCGGGGCACTGGGTGAAGCCGGGGCAGGGCGACCGGTGGGATCAGGG
GTACGACGTCACGGCGAGGTTCCTTGACTACTGCGACTCGCTCAAGCCCGGGTTCGTCGCGCAGCTCAACGCCAAGATGA
AGAGTGGGTACACCGACGACTTCTTCGCGCGGATTCTCGGGAAGAACGTGCAGCAGCTGTGGAAGGACTACAAAGCCAAG
TTTAGAGGCTGAACGCACCATAAGTTGATGGGTCCTTCACGGTGTGATGGCATAACGCACTACTTCGAATAAGACATGTG
TGATGGCATAACACACC--ATATACTGAAATGATCAACAGAACATGTCCCTTACGCTCTGTAGTGAAAGATAAATAAACG
ATTTCACTAATTCGAAATCGACTTTGAGTTACATGCTACTAGTAGTCTTAAGTTGGCGATACGTGAGTGCGTTTGTGTGG
TGGTGTGAGTGTGTGCGTGTTGTAATCGGTTTTCTAGAAAAAACAA--------------------------------AA
GGTTGTTTGGACTTGGAAAGTTTTAAAGCTGTTTGCGCACAACATGCTTGGATGGGTGGATTCAAAACCGCTCTGCGTAC
CACGATTTTTTGTCCTATATTTGTAGAACTAGACAGTGAAGACATGCAGCATGTTATGGCCCACAAACTGGATCAACTCT
GACTGTACTAGTGTTGGATACAAATTCATCGTATGTACTAGCTAGTGGCAGCTAGTTTTGAAATAGAAAACCTTATAAAT
TAGGTTTTGTTGAATGCATCCCATTTTTTAGATTGTTTTGTGATGAATTTGATTCCAATAATCGAATTCGTTTTTAATTC
TTTGATTTGCAATT-GGTGTTTCATTGATGACAAGTAGGTCGAAGCTGGAAGAGGGCGATGGATTTGTTTTGCGTCGGGA
ATGAGCTTTTGCTGGCCAAGTGCCAGGAGATATGCACCTGGTTTCCGAGCGCGAAATCTCTCGTGATGCACTCACTGGGC
CTAGCGTTGGAA--------------------------------------------------------------------
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>chr6A_910
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---------------------------CTATATAT-ATCCACTACCACAGGCAGCAAAATCACACCCACACCGATAGCTT
AGTGACACAGTCACGAGCTGCAGACATCCACACCACGAAATGAAGCTTCAGGTA---------GCCTTCTTCCTCCTGGT
GACCATGGCCGCGACGGCCCGGGCCGTGACTTTCGACGCGTCGAACACGGCGTCGGGCACCGCCGGCGGCAAGCGCTTCG
ACAACGCCGTCGGCCTCGCGTACTCAAAGCAGGTCCTCTCCGACGCCTCCACCTTCATCTGGAGCACCTTCAACCAGCGC
GCCGCTGCCGACCGCAAGCCTGTCGACG------CCGTCACCCTCGTCGTGGAGGACATCGACGGCGTCGCCTTCACCAG
TGCCAACGGCATCCACCTCAGCGCCAGCTACGTCGGCGGCTACACCGCCGGCGACG---TCAAGAAGGAGGTGACCGGCG
TGCTGTACCACGAGGCGACGCACGTGTGGCAGTGGAACGGGCAGGG---CGCGGCGAACGGCGGCCTCATCGAGGGGATC
GCCGACTACGTGCGACTCAAGGCCGGGCTCGCGCCCGGGCACTGGAGGCCGCAGGGGAGCGGCAGCCGGTGGGACGAGGG
GTACGACATCACGGCGAGGTTCCTCGACTACTGCGACTCGCTCAAGCCCGGGTTCGTCGCGCAGCTCAACGCCAAGATGA
AGAGCGGGTACAGCGACGACTTC-----GCAGATTCTCGGGAAGAACGTGCAGCAGCTGTGGCAGGACTACAAAGCCAAG
TTCGGAGGCTGAATGGACTTTTAGTCATCTC-TCTTTCACCGTGAGATGGCATACCACACTA------------------
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>chr6D_1018
CAC-----------------------------------------------------------------------------
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---------------------------------------------------GTA---------GCCTTCTTCCTCCTGGT
AGCCATGGCCGCGACGGCCCGGGCCGTGACGTTCGACGCGTCGAACACGGCGTCGGGCACCACCGGCGGCAAGCGCTTCG
ACAACGCCGTCGGCCTCGCGTACTCAAAGCAGGTCCTCTCCGACGCCTCCACCTTCATCTGGAGCACCTTCAACCAGCGC
GCCGCTGCCGACCGCAAGCCCGTCGACG------CGGTCACCCTCGTCGTGGAGGACATCGACGGCGTCGCCTTCACCAG
CGGCAACGGCATCCACCTCAGCGCTAGCTACGTCGGCGGCTACACCTCCGGCGACG---TCAAGAAGGAGGTGACCGGCG
TGCTGTACCACGAGGCGACGCACGTGTGGCAGTGGAACGGGCAGGG---CGCGGCGAACGGCGGCCTCATCGAGGGGATC
GCCGACTACGTGCGGCTCAAGGCCGGGCTCGCGCCTGGGCACTGGAGGCCGCGGGGGAGCGGCAGCCGGTGGGATGAGGG
GTACGACATCACGGCGAGGTTCCTCGACTACTGCGACTCGCTCAAGCCTGGGTTCGTCGCGCAGCTCAACGCCAAGATGA
AGAGCGGGTACAGCGACGACTTCTTCGCGCAGATTCTCGGCAAGAACGTGCAGCAGCTGTGGCAGGACTACAAAGCCAAG
TTCGGAGGCTGAA-------------------------------------------------------------------
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>chr6B_1018
CAC-----------------------------------------------------------------------------
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---------------------------------------------------GTA---------GCCTTCTTCCTCCTGGT
GACCATGGCCGCGACGGCGCGGGCCGTGACGTTCGACGCGTCCAACACGGCGTCGGGCACCACTGGCGGCAAGCGCTTCG
ACAACGCCGTCGGCCTCGTGTACTCAAAGCAGGTCCTCTCCGACGCCTCCACCTTCATCTGGAGCACCTTCAACCAGCGC
GCCGCTGCCGACCGCAAGCCTGTGGACG------CCGTCACCCTCGTCGTGGAGGACATCGACGGCGTCGCCTTCACCAG
CGGCAACGGCATCCACCTCAGCGCCAGCTACGTCGGCGGCTACACCTCCGGCGACG---TCAAGAAGGAGGTGACCGGCG
TGCTGTACCACGAGGCGACGCACGTGTGGCAGTGGAACGGGCAGGG---CGCGGCCAACGGCGGGCTCATCGAGGGGATC
GCTGACTACGTGCGGCTCAAGGCCGGGCTCGCGCCCGGGCACTGGAGGCCGCAGGGGAGCGGCAGCCGGTGGGATGAGGG
GTACGACATCACGGCGAGGTTCCTCGACTACTGCGACTCGCTCAAGCCCGGGTTCGTCGCGCAGCTCAACGCCAAGATGA
AGAGCGGGTACAGTGACGACTTCTTCGCGCAGATTCTCGGCAAGAACGTGCAGCAGCTGTGGCAGGACTACAAAGCCAAG
TTCGGAGGCTGAA-------------------------------------------------------------------
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>chr7A_1023
TCGCCC--------------------------------------------------------------------------
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----------------------------------------------------------------------TCCTCCTCCT
GGGCCTGGCAGCCACGGCGGGCGCCGTCACATTCGACGTGACGAACGAGGCGTCGAGCACGGCCGGCGGCCAGCGGTTCG
ACCAGGAGTACGGCGCCGACTACGCCAAGCAGGTGCTGTCCGACGCGTCCTCCTTCACCTGGGGCATCTTCAACCAGCCG
GACCCCTCCGACCGTAGGCCCGCCGACGGCGACACCGTCACCCTCGCCGTCCGCGACACGGACGGCATCGCCGCCACCAG
CGGCAGCACCGTGGAGCTCAGCGCCCGCTACGTCGGCGGCAT---CACCGGCGACGACCTCAAGGAGCAGGTGACGGGGG
TGCTGTACCACGAGGTGGCGCACGTGTGGCAGTGGGGGCTGCAGGACTACGGCGCGCACTCGGGGGTCTTCGAGGGCATC
GCGGACTACGTGCGGCTCAAGGCCGGGTACGTGCCGGGGCACTGGGTGAAGGAGGGCGGCGGCGACCGGTGGGATCAGGG
GTACGACGTGACGGCCAGGTTCCTGGACTACTGTGACTCGCTCAAGCCCGGCTTCGTGGCGGAGATGAACGGCAAGCTCA
AGGACGGCTACAGCGACGACTACTTCGTGCAGATCCTGGGGAAGAGCGTGGACCAGCTGTGGAGCGACTACAAGGCCAAG
T-------------------------------------------------------------------------------
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>chr1A_1033
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-----------------------------------------------------------------------CCTCCTCCT
GGCCCTCGCAGCCACGGCCGGCGCGGTCACGTTCGACGTGACGAACGAGGCGGCGAGCACGGCCGGCGGTCAGCGATTCG
ACCGGGAGTACGGCGCCGCCTACGCCAAGCAAGTGCTCTCCGATGCTTCCTCGTTCACCTGGGGCATCTTCAACCAGCCG
GACCCCTCCGACCGCAGGCCCGCCGATGGCGACACCGTGACCCTCGCCGTCCGCGACACGGACGGCATCGCCTCCACCAG
CGGCAGCACCATCCAGCTCAGCGCCCGCTCCGTTGGCGGTAT---TACCGGCGACAACCTCAAGGAGCAGGTGGACGGGG
TGCTGTACCACGAGGTGGCGCACGTGTGGCAGTGGGGGCTGCAGGAGTACGGCGCGCACTCGGGGATCTTTGAGGGTATC
GCGGACTACGTGCGGCTCAAGGCCGGGTACGTAGCGGCGAACTGGGTGAAGGAGGGGGGCGGCGACCGGTGGGATCAGGG
GTACGACGTGACGGCCAGGTTCCTGGACTACTGCGACTCGCTCAAGGCCGGGTTCGTGGCGGAGATGAACGGCAAGCTCA
AGGACGGCTACAGCGACGACTACTTCGTGCAGATACTGGGGAAGAGCGTGGACCAGCTGTGGAACGACTACAAGGCCAAG
T-------------------------------------------------------------------------------
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>chr7B_1064
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----------------------GCCGTCACGTTCGACGTGACGAACGAGGCGTCGAGCACGGCCGGCGGCCAGCGATTCG
ACCAGGAGTACGGCGCCGCCTACGCCAAGCAGGTGCTGTCGGACGCGTCCTCCTTCACCTGGGGCATCTTCAACCAGCCG
GACCCCTCCGACCGCAGGCCCGCGGACAGCGACACCGTCACCCTCGCCGTCCGCGACACGGACGGCATCGCCGCCACCAG
CGGCAGCACGGTCGAGCTCAGCGTCCGCTACGTCGGCGGCAT---CACCGGCGACGACCTCAAGGACCAGGTCACCGGGG
TGCTGTACCACGAGGTGGCGCACGTGTGGCAGTGGGGGCTGCAGGACTACGGCGCGCACTCGGGGGTCTTCGAGGGCATT
GCGGACTACGTGCGGCTCAAGGCCGGGTACGTGCCGGGGCACTGGGTGAAGGAGGGCGGCGGCGACCGGTGGGATCAGGG
GTACGACGTGACGGCCAGGTTCCTGGACTACTGCGACTCGCTCAAACCCGGCTTCGTGGCGGAGATGAACGGCAAGCTCA
AGGACGGCTACAGCGACGACTACTTCGTGCAGATCCTGGGGAAGAGCGTGGACCAGCTGTGGAGCGATTACAAGGCCAA-
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-------------------
>SNPs
---SS----S-S----------------------SS--------------------------------------------
--------------------S--------------------------S---------S---S-------S----------
S-----------------------------------S------S--S-------------S----S--------------
-----S--------------------------------------------------------------------------
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---------------------------------------------------------------------S----------
--S--------------------------------------------------------S-----------------S--
----S---S-----------------------------------------------------------------------
-S---S----------S----S---------------S-----S-----S-----S------S--------S---S---S
--------------------------------------------------------------------------------
-------------------------------------S-------S----S------S---------------------S
SS------------------------------------------------------------------------------
-----------------------------------------------------------S----------S--S------
---S-------------------------------SS-----------S-------------------------------
---S------------------S---------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------S-
-S------------------------------------------------------------------------------
-S------------------------------------------------------------------------------
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----------------------------------S----------------------------------------S----
-----------------------------------------------S-----------S--------------------
----------------------------------------S------------------------------------S--
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-----------------------------SS-------------------------------------------SS----
------------S-----------------------------S--------------------------------S----
--------------------------------------------------------------------------------
-------------------------S-------S-----------------S-------------------------S--
--S-----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSS
>forward_3557
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-----------------TGTTCTACGGTCCATGGTCG-------------------------------------------
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>reverse_5273
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------------------------------------------------------------------------TCCATCAA
CGGCCTGATACG--------------------------------------------------------------------
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-------------------
