>input_sequence_71941
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---------ATGCGGCCGCCGTCGCCGCCGCGGCCGCTGGCCTTCCCAACGCTGGACTCGCTCGCGGCGTACCTCCGGCC
GCGCCTCCCGGGCCCGGCGCTCGCCTCCTGGGGATCCGCGCCGGGGACCAAGAACCTGCTCAACCTCTTCCTGGAGCTCT
CCTGCGGCGACTGCACGCTGCTGCCCGCGGCCTCCTCCCCGCCGGCCCTCGTCGTGCGCGCCGTCCACGTCGCCACCGTG
CGCATCCGCAACCGCCGGGGCGCGCTCCTCGTGGAGACCCGCCAGCTGCTCTCCGATGGCACGCTCCGCCGCCGGGCCGC
GCGGCCGCTCTCCGAGAAGATGCGCCCCGGGGAGACGCCGGAGGCCGCCGCGGCCCGCGCCGTCGTCGAGGAGCTCGGCG
AGCGCGCCCGCGTCCGGATCCTGGGGGCGGCCCCGGAGCCGCGCGTGGAGGAGCGGGAGTCCGTCTCGTACCCGGGGCTC
CCCGCCAGGTACGTGCTGCACGCGGTGGACGCGGAGCTCGTGGAGGGCGTCCCGGAGGAGGGCGAGTTCGACACGGAGGA
GGCCGGCGAGGGCGAGGGCCACGACGGCGGCGGCGCGGCCATCACCGTGAAGCGGCACTACTGGTCATGGGTCGACGACG
AGGAGGCCCGCGGCGAGGCCGCCCCGGCCGCCGTCGCCGGTGCGCAGTAG------------------------------
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>chr7A_1_TraesCS7A01G406000
AGGGCTCTGGTCTCTTGAGTCGTTCTTCCGTTTCAGGGATCTCGAGTCAATTCGACCACTGGTTCTGGCTTTCATCTTTG
ATTCCAGCTCCATTTCCTTCTCCCTGGCACGCCACATCTCATTAACCTCCACAACTCGATTTGCTGCAGACAAACAGAGA
AATTT-TATTTCGACGAGA------------------------AAGTTCCAAACTGGATTTCTAACGGCAA-TTCTCAAC
AAAGTAGTATCTTGTTTCAAATGAAAGTTTTTGGATATGAGCACTAGCA----------ATTTTTTTTACT--AAGACAT
GTCATTT-GCAATATAACTGCTTTTAG-------------TTAGTAAATCATATTAGCTGGGCACTGAGAATAACCAACA
GATACC-------------------------------------------------------------AATGAATCATATT
AACATCGAACAAAAGC--AAGGAGAAGCCAACCGACCTTGCTGAACGCCAAGAACGGTGGCGGCAAGGAACCGCGAGTTG
GGGCGGTGCCTCACGTTAGGTTTCTGCAGATAGGCGTGCACCCCTTCCTTCTCCGCCTGCATCCGCAGCCTCCGGGCCTC
CTCGAGGAGCAACGCCGCAAGGCGATTCTCCGTCCCCAAATCCATCGTCCAGCCGCGAAGGCAAGCCCTGTCTGGAGAGG
AGAGGAGAGCCTCGGTGCCCGTGCGGGCCTCGGCGACAGCGGCCGTGCACGCGTCGCCCGGCGGCGACGGACGGCGAGAA
GCCCAGCCGCCGGGAGGATTTTGGACGCGTCTAGAAATTCCGGTGGCGATTGGGGACAAGAGACCTCGATTGCTTCCTTC
TGTTTTGTGATCGATTCCACCGATTCCTGCTGGGCTTCCGCTTCCGTATCCGGCTCGTGCTGGG---------TTGCTGT
TTTCTTGTATGGGCCTCCACTAGCCCATGTAACCGAGCCCACGCCTAGCAGCATTCCCTAAGCCCGAGCGCCATGCTTCC
GTTCCGGCAACGCAACCCACCGGAGG-----AATTCTCATCTGGAGGAGAAAGAAACTCGTCCGCCCCCAAATCGACGAC
GGGCACCAGATGCGGCCGCCGTCGCCGCCGCGGCCGCTGGCCTTCCCAACGCTGGACTCGCTCGCGGCGTACCTCCGGCC
GCGCCTCCCGGGCCCGGCGCTCGCCTCCTGGGGATCCGCGCCGGGGACCAAGAACCTGCTCAACCTCTTCCTGGAGCTCT
CCTGCGGCGACTGCACGCTGCTGCCCGCGGCCTCCTCCCCGCCGGCCCTCGTCGTGCGCGCCGTCCACGTCGCCACCGTG
CGCATCCGCAACCGCCGGGGCGCGCTCCTCGTGGAGACCCGCCAGCTGCTCTCCGATGGCACGCTCCGCCGCCGGGCCGC
GCGGCCGCTCTCCGAGAAGATGCGCCCCGGGGAGACGCCGGAGGCCGCCGCGGCCCGCGCCGTCGTCGAGGAGCTCGGCG
AGCGCGCCCGCGTCCGGATCCTGGGGGCGGCCCCGGAGCCGCGCGTGGAGGAGCGGGAGTCCGTCTCGTACCCGGGGCTC
CCCGCCAGGTACGTGCTGCACGCGGTGGACGCGGAGCTCGTGGAGGGCGTCCCGGAGGAGGGCGAGTTCGACACGGAGGA
GGCCGGCGAGGGCGAGGGCCACGACGGCGGCGGCGCGGCCATCACCGTGAAGCGGCACTACTGGTCATGGGTCGACGACG
AGGAGGCCCGCGGCGAGGCCGCCCCGGCCGCCGTCGCCGGTGCGCAGTAGGAACTAATATGTGCTGTTATCATGTTGTGT
TTGGT------TAATTTATTTTTATCACTTCATCGGCTTGCGATATCATGTAATACTCC--AGTATGTTTCTTGCGCTCT
GCTCTGCAG--------TGTTCATAGTACCACGGATCTCTTTGCAACCC-CACAGTTAGTCACTCTCTG----------T
CTCTGCACCGCAGGGATGTCGAAGTGTTTCTTCCGCACTCAGGTCTGTTTGTTTGAGCTTCGAGACCAGATTCAGCTTTG
CCAGTGAACCTGAATCTGAAAGTTGAAACAAACAGTTGTATATCAAATCAGCATTACCAGTGAAGCTGAATTTGTTAGCA
TCCAGGCCATTTCCAATACAATTGTCTAACACATCTCAAAGTGTACTTCAAGCGAGTCCACAAATAAT--AAACCAATCA
AAGCTGAAACAAACATGACTCGCTCTGCCTACTCCTACATAACGGAAGAATCTGCAACTGCTTAGGCCATCTCTAACGGC
GACCCTCAAACCGTCCGCATATGTCTGCATCGAGCTGTCCGGACCGTGGAAGACATCCAACGCGGTCCTGTATCAGTTCG
TGGCGCGGTCCGGACCATGATTTTTCC-GCAAATCAGAACCAAA--------TGGGGGGAGGGGGTGCGGGAGTTCGGAG
TTCGGACACGCTAAACGTCGCGCTCTACTC-CCC-TGGCCCACCCAAAAGGAAAGCGGAGCCCGCGCTTTTTGTACCAAC
CTGCACTGTTTCCGCGCCAAAACCT-CCACTCTCGTCTTCCATCCCCCGCCGCTCTTCACCTAATTCCCGTCC-TTTT-T
CCCACCCTTTTCTTCCTTCCGTCGCCGACGCATGGAACCAGG-------CTGTTAGAGATGGAGGTGACTGCGGTGCCGG
ATGATCCGAGCATCACGCTCACCTGGAAGATCAGCTCGGCTACGTGGCAAACTCGTCGTGCGAAAGCGAAGGCCGCAAAG
GAGGAGAATCTCAAGAAGCGAATGGTCGCCA--GTGGGT--GTGGTGGTGGCGGTGGAGGTGGT
>chr7D_1
AGGGCTCTGGTCTCTTGAGTCGTTCTTCCGTTTGTGGGATCTCGAGTCAATTCGACCATTGGTTCTGGTTTTCATCTTTG
ATTCCAGCTCCAGTTCCTTCTCCCTGGCACGCCACATCTCATTAACCTCCACAACTCGATTTGCTGCAGACAAACAGAGA
AAAAAACATTTCAATAAGAAAGCACGTATTTCCACACAATTGCAAGTTCCAAACTGGATTTCTATCGGCAAGTTCTCAAC
AAAGTAGCATCTTCTTTCAAATGAAAGTTTTTGGATATGAGCACTAGCA----------AAAAAA-TTACT--AAGACAT
GTCATTTTGCAATATAACTGCTTTTAG-------------TTAGTAAATCATATTAGCTGGGCACTGAGCATAACCAACA
GATACC-------------------------------------------------------------AGCTTATCATATT
AGCATCGAACAAAAGC--AAGGAGAAGCCAACCGACCTTGCTGAACGCCAAGAACGGTGGCGGCAAGGAACCGCGAGTTG
GGGCGGTGCCTCACATTAGGTTTCTGCAGATAGGCGTGCACCCCTTCCTTCTCCGCCTGCATCCGCAGCCTCCGGGCCTC
CTCGAGGAGCAACGCCGCAAGGCGATTCTCCGTCCCCAAATCCATCGCCCAGCCGCAAAGGCAAACGCTGTCTGCAGAG-
-GAGGAGAGCCTCGGTGCCCGTGCGGGCCTCGGCGACAGCGTCCGTGCACGCGTCGCCCTGCGGCGACGGACGGCGAGAA
GCCCAGCCGCCGGGAGGATTTTGGACGCGTCTAGAAATTCCGGTGGCAATTGGGGAGAAGAGACCACGATTGCTTCCTTC
TGTTTTGTGATCGATTCCACCGATTCCTGCTGGGCTTCCGCTTCCGTGTCCAACTCCTGCTGGGCCGTCATAATTGCTGT
TTTCTTATATGGGCCTCGACTGGCCCATGTAACCGAGCCCACGCCTAGCA---TTTCCTAAGCCCGAGCGCCATGCTTCC
GTTCCGGCAACGCAACCCACCGGAGGATCTCAATTCTCATCTGGAGGAGAAAGAAACTCGTGCGCCCCCAAATCGACGAC
GGGCACCAGATGCGGCCGCCGTCGCCGCCGCGGCCGCTGGCCTTCCCGACGCTGGACTCGCTCGCGGCGTACCTCCGGCC
GCGCCTCCCGGGCCCGGCGCTCGCCTCCTGGGGATCCGCGCCGGGGACCAAGAACCTGCTCAACCTCTTCCTGGAGCTCT
CCTGCGGCGACTGCACGCTCCTGCCCGCGGCCTCCTCCCCGCCGGCCCTCGTTGTGCGCGCCGTCCACGTCGCCACCGTG
CGCATCCGCAACCGCCGGGGCGCGCTCCTCGTGGAGACCCGGCAGCTGCTCTCCGACGGCACGCTCCGCCGCCGGGCCGC
GCGGCCGCTCTCCGAGAAGATGCGCCCCGGGGAGACCCCCGAGGCCGCCGCGGCCCGCGCCGTCGTCGAGGAGCTCGGCG
AGCGCGCCCGCGTCCGGATCCTGGGGGCGGCCCCGGAGCCGCGCGTGGAGGAGCGGGAGTCCGTTTCCTACCCGGGGCTC
CCCGCCAGGTACGTGCTGCACGCGGTGGACGCGGAGCTCGTCGAGGGCGTCCCGGAGGAGGGCGAGTTCGACACGGAGGA
GGCCGGCGAGGGCGAGGGCCACGACGGCGGCGGCGCGGCCATCACCGTGAAGCGGCACTACTGGTCATGGGTCGACGACG
AGGAGGCCCGCGGCGAGGCCGCCCCGGCCGCCGTCGCCGGTGCGCAATAGGAATTAACATATGCTGTTATCATGTTGTGC
TTGGT------TAATTTATTTTTATCAATTCATCGGCTTGCCATATCATGT---ACTCC--AGTATGTTTCTT-------
---CTGCAT--------TGTTCATGGTACCACGGCTCTCTTTGCAACCCGCACAGTTATTAGTCA-------CTCTCCAT
CTCTCCACTGCAGGGATGTCGAAGTGTTTCTTCCACACTCAGGTCTGTTTGTTTGAGCTTCGAGACCAGATTCACCTTTG
CTAGTGAACCTGAATCTGAAAGCTGAAACAAACAGT--TATATCAAATCGGCATTACCAGTGAAGCTGAATTTGTTAGCA
TTCATGCCATTTCCAATGCAATTGTCTAAAACATCTTAAAGTGTACTTCAAGCGAGTCCACAGATAAATAAATCCAATCA
AAGCTGAAACAAACATAACTCGATCTGCCTACTCCTACATAACGGAAGAATCTGCAATTGTTTAGGGCATTTCCAACGGC
GACCCACAAACTGCCCGCATATGTCTGGATCGTGCTGTCTGGACCACGGAAGCCATCCAACGCGGTTCTGTATCAGTCCG
TGGCGCGGTCTGGACCATGATTTTTCCCGCAAATCGGAACCAAAGGGG-----GGGG------------G------GGAG
TCCAGACACGCTAAACGTCGCGCTCTGACC-CCC-TAGCCCACCCAAAAGGAAGGCGGAGC-----------------AC
CCGCACTGTTTCCGCGCCAAAATCCCCCACTCTTGTCTTCCATCCTCCGCCGCTCTCCACCCAATTCCCGCCC-TTTTCT
CCCACCCTCTTCTTCCTTTCGCCACCGACGCATGAAACCGGGGGAGAACCTGTCGGAGATGGAGGTGGCGACGGTGTCGG
AGGATCCGAGTATCACGCTCATCCGGAAGATCAGTTCGGCTACGCGACAAACTTGCCGCGTGAAGGCGAAGGCCACAATG
GATGAGAACCTCAAGAAGCGGATGGTCGTCGGTGTGTGT--GTGGTGGTGGCGGTGGACGTGGT
>chr7B_1
AGGGCTCTGGTCTCTTGAGTCGTTCTTCCGTTTCTGGGATCTCGAGTCAATTCGACCATTGGTTCTGGTTTTCATCTTCA
ATTCCAGCTCCAGCTCCTTCTCCCTGGCACGCCACATCTCATTAACTTCCACAACTCGATTTGCTGCAGACAAAAAGAGA
-AAATATATTTCAAAAAGA------------------------AAGTTCCAAACTGTATTTCTACCGGAAAATTCTCAAC
AAAGTAGA---TTCTTTCAAATGAACGTTTTTGGATGTGAGGGCTAGCAGAAACAAAACATTTTTTTTACTACAAGACAT
GTCATTTTGCACTATACTCGTAACTTCGTAGTAATTTTAATTAATCAATCATATTAGCTGGGCTTTGAGCATAACCAACA
ACTACTCCCTCCGTCCGGAAATACTTGTCATCAAAATGGATAAAAGGGGATGCTTAGTTGGCCAGTGAATCAATCATATT
AGCGTCGAACAAAAAAGTAAGGAGCAACCAACCGACCTTGATGAACGCCAAGAACGGTGGCGGCAAGGAACCGCGAGTAG
GGGCGGTGCCTCACATTAGGTTTCTGCAGATAGGCGTGCACCCCTTCCTTCTCCACCTGCATCCGCAGCCTCCGGGCCTC
CTCGAGGAGCAACGCCGCAAGGCGATTCTCCGTCCCCAAATCCATCGCCCAGCCGCGAAGGAAAACGATTTCTGGAGAG-
-GAGAGGAGA----------------GCCTCGGCGACAGCGGCCGTGCACGCGTCGCCCGGCGGCGACGGACGGCGAGAA
GCCCAGCCGCCGGGAGGATTTTGGACGCGTCTAGAAATTCCGGTGGCGGTTGGGGACAAGAGACCTCGATTGCTT-CTTC
TGTTTTGTGATCGATTCCACCGATTCCTGCTGGGCTTCCGCTTCCGTGTCCAGCTCGTGCTGGACCGTCGTAATTGCTGT
TTTCTTGTATGGGCCTCCACTAGCCCATGTAACCGAGCCCACGCCTAGCA---TTTCCTAAGCCCGAGCGCCATGCTTCC
GTTCCGGCAACGCAACCCACCGGAGG-----AATTCTCATCTGGAGGAGAAGGAAACTCGTCCGCCCCCAAATCGACGAC
GGGCACCAGATGCGGCCGCCGTCGCCGCCGCGGCCGCTGGCCTTCCCGACGCTAGACTCGCTCGCGGCGTACCTCCGGCC
GCGCCTCCCGGGCCCGGCGCTCGCCTCCTGGGGATCCGCGCCGGGGACCAAGAACCTGCTCAACCTCTTCCTGGAGCTCT
CCTGCGGCGACTGCACGCTCCTGCCCGCGGCCTCCTCCCCACCGGCCCTCGTCGTGCGCGCCGTCCACGTCGCCACCGTG
CGCATCCGCAATCGCCGGGGCGCGCTCCTCGTGGAGACCCGCCAGCTGCTCTCCGACGGCACGCTCCGCCGCCGGGCCGC
GCGGCCGCTCTCCGAGAAGATGCGCCCCGGGGAGACCCCCGAGGCCGCCGCGGCCCGCGCCGTCGTCGAGGAGCTCGGCG
AGCGCGCCCGCGTCCGGATCGTGGGGGCGGTCCCGGAGCCGCGCGTGGAGGAGCGGGAGTCCGTCTCGTACCCAGGACTC
CCCGCCAGGTACGTGCTGCACGCGGTGGACGCGGAGCTCGTGGAGGGCGTCCCGGAGGAGGGCGAGTTCGACACGGAGGA
GGGCGGCGAGGGCGAGGGCCACGACGGCGGCGGCGCGGCCATCACCGTGAAGCGGCACTACTGGTCGTGGGTCGACGACG
ACGAGGCCCGCGGCGAGGCCGCCCCGGCCGCCGTCGCCGGTGCGCAGTAGAAATAAATATATGCTGTTATCATCTTGTGT
TTGTGTTTGGGTAATTTATTTTTAACAATTCATCCGCTTGCCATATCATGTACTCTCGTTGAGTATGCTTCTTGCGCTCT
GCTCTGCAGGACTGCAGTGTTCATAGTACGGCGGCCCTTTTTGCAACCCGCACAGTTCGTCACTCTCTCTCTCTCTCTCT
CTCTGCGCCGCAGGGACGTCGAAGTGTTTCTTCCGCGCTCGGGTCTGTTTGTTTGAGCTTCGAGGCCAGATTCAGCTTGG
CCGGTGAAGCCGAATCTGAAAGCTGAAACAA-------------------------------------------------
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>chr2A_2143
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------------------------------------------------------------CTAAGGGCATCTCAAACGCC
GACCCTCAAACCGCCTACATCTGACCGGACTCGGCAGTCCTGACCCTGGAAGCCATCCAATGCAGTCCTATATCGGTCAA
CGGCGCGATCCAGACCATGAG-TTTCCTGCAAACCGGAACCAAACGGG-----GGGGAGTGGGGGTTGCG------GGAG
TCCGGACACGAGAAACGTCGGACTCTGACC-CTCTTGACCCACCCAAAAGGAAGGCGGAGCCCGCGCTTTT-GTAGCAAC
CCGGACTGTTTCCACACCAAAATCCCCCACTCTCATCCTCCATCCCCCACTGCTCTCCACCCAATTCCCACTCTTTTTCT
CCCACACTCTCCTTCCTTCCGCCGTCGACGCATGGAACCGGAGGAGAACCTGTTGGAGATGGAGGTGGCGGAGGTGCTGA
AGGATCCAAGCATCACGCTCGGCCGAAAGATCAGCTCGGCTATGGGGCATACTCGCAGCATCAAAGCGAAGGCCGCAAAG
GAGGAGAATCTCAAGAAGCGGATGGCTGCCGGTG--GGC--GTGGTGGTGGAGTTGGCCGTGGT
>chr2B_2150
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-------------------------------------------------------------------CATCTCCAACAAC
GACCCGCAAATTGCCCGCATACGTCCGGACCGTGTTGTCCGGACCGTAGAAGCCATCCAACGCGGTCCTGTATCCATCAG
CAGGGCGGTCCGGACATGTTT-TCTCCCCCAAACAAGAGACAAACATGTGTGTGGGGGGGGGGGGTTACG------GGAG
TCCGGACACGCGAAACATCGCTCTCTGCCC-CCC-TAGCCCACCCAAAAGGAAGGCGGAGCCCATGCTTTTTG-ACCATC
CTGCAATGTTTCCGTGCCAAAATCCCACACTCTCTTCTTCCACCCCCCGCTGATCTCTGTCCATTTCCCACTC-TTTTCT
CCCACCATCTCCTTCCTTCTGCCGTTGATGCATGGAACCGTCGAAGAATCTGTCGGAGATGGAGCCTGCGGAGGTGCCGG
AGGATCTAAGCATCATGCTCGCCCGAAAGATCAGCTCGGCTACGTGGCAAACTCGTCGCGTCAAAGTGAAGGCCGCAAAG
GAGGAGAAGCTCATGAAGAAGTTGGCCACCAGTG--GGC--CTGGTGGT---------------
>chr1B_2151
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--------------------------------------------------------------------ATCTCCAACGGC
GACCCTCAAACCGGCTGCATCTATTCGAATTTAGCAGTCCAGACTTTGAAAATCATCCAACACGGTTTTGTATCGGTCTA
CGGCACAGTTTGAACCATGAT-TTTCTCACAAACCGAAACCAAACGTG-----AGGAATT-----TTGCG------GTAG
TATAGACATGAGAAACGATGGACTCTGACCTCCC-TGACCCACCCAAAAGGAACGCGGAGCCCGCGCTTTG-GTAGCAAC
CCGCACTGTTTC-GCGACAAAATCCCCCACTCCCTTCTTCCATCCCCCGCTACTCTTCACCAATTTCCCGCCC-TTTTCT
CCCACCCTCTTATTCCTTCCGTCGCCGACACATGAAACCGGAGGAGAACTTGTTGGAGATGGAGGTGCCAAAGGTGTGGG
AGGATCCGAGCGATCAA-----CCGAAAGATCAGCTCGGCTACGTGGCAAACTCGCCGCGTCAAAGTGAAGACCGCAAAG
GAGGAGAAGCTCAAGAAGCGGATGGCCGCCGGTG--GCGTGGTGGTCATGGCGG----------
>SNPs
----------------------------------S-----------------------S---------S-----------
------------S-------------------------------------------------------------------
--SS--------S-SS------------------------------------------------S---------------
-------S-----S------------------------------------------------------------------
---------------------------------------------------------------------S----------
----------------------------------------------------------------------S---------
-S------------------------------------------------------------------------------
--------------S-----------------------------------------------------------------
-----------------------------------------------S----------------S-S------------S
S-------------------------------------------------------------------------------
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-----------------------------------------------S---S----------------------------
--------------------------------------------------SSS--S------------------------
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-----------------------------------------------S--------------------------------
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-------------------S------------------------------------------------------------
--------------------------------------------------------S-----------------------
------------------------------------S--S----------------------------------------
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-----------------------------------------------------S------S-------------------
---------------------------S-------------S----------S---------------------------
----------------------------------S---------------------------------S-----------
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----------------------S-------------SS-----------S------------------------------
-S--S------------S-----------S------S-------------------------S----S----S-------
----------------S-----S----------------------------------S--------S------S------
-------------S-------------S------------------------S------------------------S--
-----------------------------------------------------------S------SSS-SSSSSS----
-S------------------------S-S------------------------S--------------------------
----------------------S-S------------------------------------S--------S---------
--------S------------------------------S--------------S------------S-S----------
-S---------------------S----------------------------------S-S-------------------
--------------------S-------------------------------------S-----
>forward_69
-------------------------------------------------ATTCGACCACTGGTTCTGGC-----------
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>reverse_1955
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----------------------------------ATCTCTTTGCAACCCCACAGT-------------------------
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