>input_sequence_71925
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----------------------------------------ATGGAGGATCTCCCGGAGGCACTGCTGGCAGAGATCATCA
AGAGGGTTACCAAAAGAAGTGACTTGAATTCTCTTTCCCTTGTCTCGAAGCGTCTCTTCGCCATCCAGGCTGAGCAAAAA
GGGTCCATCCGGGTTGGTTGTGGCCTTTGCCTTGCCACTGAAGCTTTGGTGTCACTCTTCTCCCGGTTCCCCAATTTGTG
GAAAGTAGAGATCGATTACGCTGGCTGGACACCTTCCCACGGGGATCAGTTGGACAACCATGACTTCTTTGTGATTATAT
CTTGCTGTCCCTCTCTAACCGATCTCACACTAAGTTTCTGTTCACAAATCGATGACACCGGTCTTGGTTATCTATGCTAC
AGCGAGAAATTGACTTCCCTCAGGCTGAACTCTGCAACTGAAATAACTTCTAGTGGACTTCTCTCGGTCGCAGTTGGTTG
CAAGAGTCTGTCTTCCCTCCACCTTATAAACTGTGAGAAAGTAGGCAGTACCGAGTGGCTGGAGTATCTAGGCTTGAATG
GATCGTTGGAAGAACTTGTACTCAGGAATTGCAATGGAATCAGCCTGTATGACCTCATAATGCTCGGTCCAGGATGGATG
AAGCTACGTAAGTTTGAATTTCGAATGGGAGGATTATGGGATGTTCATGAGGGATATGATCATATGGAAATCGATGGTTA
G-------------------------------------------------------------------------------
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>chr5D_1_TraesCS5D01G112400
AGGAGGGCGTTGCGTTTTGCATGCGGGAGATGTTAGGTGCTGATCTGACGGCTGCGAGAGGCCAGATCGAACGGCTCAAG
AGAGCACCGTTCTGGATCCTGGCCGGTCGGCCGGCGCCAGCGCCCTCCGGACTCTGCCTGCAATGCAAAGAAAACGAAAT
TACACAGAAGCACACAGATCTCTCCATCGCGAAGAACACTGCCTCCTGCGTTCTTCACCCTCTGCAAAATATCTCGTCCC
CTTGCGCTCGCTCGGGAAGGCTAGGGTTTCAGGGTTCTCCTCAATCGGAATCAGTCTGGGACTCGCCCTTCAAATTCGCC
CGGAGACGGAGCCCTCCTCCCCCGGCCCATCCACGGCGGCCACCATTTCTGTCCCGTTCTTCTCAATCGGCATATTTCCG
CTGGTTGGTTCGTGGTACGTACGGATTCGATTTCGTTGTGTGCCCTCCCTTTCCGGTTCGGTTCTTGATCGATACAGGCG
ACAAGGAAACCAGTATTATCAGTAGCTAAGGTTAATTCGACCCTCTAGTTACATTGTTGTTCCGTTAATGTCGTAAATCG
GATGTGCAAGCTGCGAAGTAAGCAAGTACTACTGAATTTAGCTTATTGTTGATGATGCGTCCAGTAGCTTCTTTCTTGTT
TGCCGAAGAAGGTTTAGGTTTTCATCGACTGATACTGAAGAGGGTTTAGGTTTTCATCATCATATGAATTATCTCTAATG
TGATTAGGTTATCTTCATATGCTTCATTTTGATCTCATTATAATTTCTATACAAGATGCGAAGTCAGCAAGTACTGAATT
CAGCTTATTGTTGATGATGCGTTTAGTAGATTCTTTCTTTGCTCAGCAATTTGATGAACACACCAATTAACAATTGATAC
TGAAGGGGGTTCAAAATTATCTCTAATGTGGGTAAATTATCTTCATATGCTTCATTTTGATCTCATTATAGTTTATGTTT
TAGTCCAGCATTCTGGATACCCAATCCCAACTAGCACTCGATGGAGGATCTCCCGGAGGCACTGCTGGCAGAGATCATCA
AGAGGGTTACCAAAAGAAGTGACTTGAATTCTCTTTCCCTTGTCTCGAAGCGTCTCTTCGCCATCCAGGCTGAGCAAAAA
GGGTCCATCCGGGTTGGTTGTGGCCTTTGCCTTGCCACTGAAGCTTTGGTGTCACTCTTCTCCCGGTTCCCCAATTTGTG
GAAAGTAGAGATCGATTACGCTGGCTGGACACCTTCCCACGGGGATCAGTTGGACAACCATGACTTCTTTGTGATTATAT
CTTGCTGTCCCTCTCTAACCGATCTCACACTAAGTTTCTGTTCACAAATCGATGACACCGGTCTTGGTTATCTATGCTAC
AGCGAGAAATTGACTTCCCTCAGGCTGAACTCTGCAACTGAAATAACTTCTAGTGGACTTCTCTCGGTCGCAGTTGGTTG
CAAGAGTCTGTCTTCCCTCCACCTTATAAACTGTGAGAAAGTAGGCAGTACCGAGTGGCTGGAGTATCTAGGCTTGAATG
GATCGTTGGAAGAACTTGTACTCAGGAATTGCAATGGAATCAGCCTGTATGACCTCATAATGCTCGGTCCAGGATGGATG
AAGCTACGTAAGTTTGAATTTCGAATGGGAGGATTATGGGATGTTCATGAGGGATATGATCATATGGAAATCGATGGTTA
GTCATGAAGCTGACAATTGATGTTTCATGCTGCCATGATTGTTGTTTGGCTTGTGAGCAGTTAATTTGGGGAAAATTGCC
AGGGAGAAGAATGAGATTTCGAGGGTCTTCTAGTTGATTATTTTTAGGGAAAACTTTGTTTTTGCCACTCTAGCTTTTGC
CCACTTTGCTTATGCCACTCTAGAATTTGACATTTCACTTTTGCCACTCTTAGCTTTCGACAATACATCACTTTTGCCAT
TCTGTGGCAAAAGCAAAATTCTCAAAGTGGCAATTGTGATACATCGCAAAAGCTAAGAGTGGCAAAAGTGAAATGAAAAA
TTATCATTTTTGCCATGGAATGGCATTTGTGATGTATTGTCAAAAGCTAAGAGTGGCAAAAGTGAGATGTCAAATTCTAG
AGTGGCATAAGCAAAGTGGGCAAAAACCAGAGTGGCAAAAACAAAGTTTTCCCTTTTTTTTATTAAGATGTCATGCTGTA
ATATCTGTCACCAAGAGACTTAACACAACAAATTATTGGAGCTTTCATCAATTAAAACATCAACATCCTGGACCATTACA
CTGGAAAACA-GTACAGAAATGCCGGCCATGCAG----------------------------------------------
----------CTTGCCGGTACTTTGTCCCTTGTTAATTCATGTTACTTTTCTGGAACAAATGTAAGATGGCATGGTCTGT
TGTTCTGCTATGGTGGAATTCAGGATCCTATATCAGAAGAATTTACTAGAGGACTGTTGATCACTTGTTTCCACAGATTA
TTCCAGATGCAGAAGTAAACTCAGAAGAGAAAGATGACAGGATGTTAGCATCTTCAAATGGTATGGGGTGCACAGCCCTG
AAAGTATGGAATTAGTATACACTAGGTGGTTTTCGCATGTTACTTGAAGGCTATCATCCTTTATGGAGCAGTCTACTCTC
GGAAGGTATGCATCACAGTCTGTGTTGTTTTATGATGCCTAAGTGGACCTTATTTTGCATGTGTGATCAGGCTTCACCTT
TTGTGCAAAAAATATCAG-
>chr5A_702
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-------------------------------------------------------------ATATGAATTATCTCTAATG
TGATTAGGTTATCTTCATATGCTTCATTTTGATCTCATTATAATTGCTATACAAGCTGCGAAGTCAGCAAGTACTGAATT
CAGTTTATTGTTGATGATGCGCTTAGTAGATTCTTTCTTTGCTCAGCAATCTGATGAACACACCAATTGTCAATTGATAC
TGAAGAGGGTTCAAAATCATCTCTAATGTGGGTAAATTATCTTCATATGCTTCATTTTGATCTCATTATAGTTTATGTTT
TAGTCCAGCATTCTGGATACCCAATCCCAACTAGCACTCGATGGAGGATCTCCCGGAGGCACTGCTGGCAGAGATCATCA
AGAGGGTTACCAAAAGAAGTGACTTGAATTCTCTTTCCCTTGTCTCGAAGCGTCTCTTCGCCATCCAGGCTGAGCAAAAG
GGGTCCATCCGGGTTGGTTGTGGCCTTTGCCTTGCCACTGAAGCTTTGGTGTCACTCTTCTCCCGGTTCCCCAATTTGTG
GAAAGTTGAGATCGATTATGCTGGCTGGACACCTTCCCACGGGGATCAGTTGGACAACCATGACCTCTTTGTGATTATAT
CTTGCTGTCCCTCTCTAACCGATCTCACACTAAGTTTCTGTTCACAAATCGATGACACCGGTCTTGGTTATCTATGCTAC
AGCGAGAAATTGACTTCCCTCAGGCTGAACTCTGCAACTGAAATAACTTCTTGTGGACTTCTCTCGGTTGCAGTTGGTTG
CAAGAGTCTGTCTTCCCTCCACCTTATCAACTGTGAGAAAGTAGGCAGTACCGAGTGGCTGGAGTATCTAGGCTTGAATG
GATCATTGGAAGAATTTGTACTCAAGAATTGCAATGGAATCAGCCTGTATGACCTCATAATGCTTGGTCCAGGATGGATG
AAGCTACGCAAGTTTGAATTTCGAATGGGAGGATTATGGGATGTTCATGAGGGATATGATCATATGGAAATCGATGGTTA
GTCATGAAGCTGACAATTGATGTTTCATGCTGCCATGATTGTTGTTTGGCTTGTGAGCAGTTAATTTGGGGAAAATTGCC
AGGGAGAAGAATGAGATTTCGAGGGTCTTCTAGTTGATTATTTTTA----------------------------------
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--------------------------------------------------------------TTAAGATGTCATGCTGTA
ACATCTGTCACCAAGAGACTTAACACAACAAATTATCGGAGCTTTCATCAATTAAAACATCAACATCCTGGACCATTACA
CTGTGGAAAACGTACAGAAATGCCGGCCATGCAGTTGCTCTGGCTAGTGCATGGCCTGAGAAGCAGGAGGGAACATGCAG
GAGAAAACTACTTGCCGGTACTTTATCCCTTGTTAATTCATGTTACTTTTCTGGAACAAATGTAAGATGGCATGGTCAGT
TGTTCTGCTATGGTGGAATTCAGGATCCCATATCAGAAGAATTTACTAGAGGACTGTTGATGACTTGTTTCCTCAGATTA
TTCCAGATGCAGAAGTAAACTCGGAAGAGAAAGATGATAGCATGGTAGCATCTTCAAATGGTATGGGGTGCACAGCCCTG
AAAGTATGGAATTAGTATACACTAGGTGGTTTTCCCATGTTACTTGAAGGCTATCATCTTTTATGGAGCAGTCTACTCTC
GGAAGGTATGCATCACAGTC--TGTTGTTTTATGATGCCTAAGTGGACCTTATTTTGCATGTGTGATCAGGCTTCACCTT
TTGTCCAAAAAAAAATCAG
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------
---------------------------------------------S---------S------------------------
---S-----------------S----------------------------S-----------------SS----------
-----S-----------S--------------------------------------------------------------
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-------------------------------------------------------------------------------S
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------S-----------S---------------------------------------------S---------------
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---------------------------------------------------S----------------S-----------
---------------------------S----------------------------------------------------
----S---------S---------S---------------------------------------S---------------
--------S-----------------------------------------------------------------------
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----------------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------
-S----------------------------------S-------------------------------------------
---SSS--S-----------------------------------------------------------------------
------------------------S----------------------------------------------------S--
----------------------------S--------------------------------S----------S-------
----------------------S--------------S--S---S-----------------------------------
----------------------------------S-----------------------S---------------------
--------------------SS----------------------------------------------------------
----S-------S-SSSS-
>forward_407
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-------------------------------------------------------------------CGGCATATTTCCG
CTGGTTG-------------------------------------------------------------------------
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>reverse_1429
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--------------------------------------------------------------------CGCAGTTGGTTG
CAAGAGTC------------------------------------------------------------------------
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>forward_424
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----TTGGTTCGTGGTACGTACGG--------------------------------------------------------
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>reverse_1839
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------------------------------------------------------------------------------GC
CCACTTTGCTTATGCCAC--------------------------------------------------------------
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