>input_sequence_71923
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-------------------------------------------------------------------------ATGGCTG
CGGCTTCTCCTCCCCTCCTCCCCGTCTCCGTTCTCCCGGCGGCCACCACCGCGACCACCACCATCGTCCTCCCCGTTCCG
GACACCTCCTCGGCGGCCGACCAGCGCGCCTACCTCTCCCGCCTCCTCGACTCCGCCAAGCGCTCCCTCTCCGGCGCGCG
CCCGTGGGCGGAGCTCCTCGACCGCGCGGCGCTCAGCCGCCCGGAATCCCTCGCCGACGCCACCGCCCGCGTCCGCAGGA
ACCTCGCCTACTTCCGCGTCAACTACGCTCTCCTCGTCGCGTTCTCCCTCGCCGCCTCCCTCCTCGCGCACCCGTTCGCG
CTCGCCGCCCTGCTCGCGCTCCTCGCCGCCTGGTGCGCGCTCTACCTCCTCCGCGCCGCCGACGCACCCCCGCTGGAGGC
CTTTGGGAAGACCTTCTCCGAGAGGGAGACGCTGGGCGGGCTCTTGGCGGCGTCGGCGTTCGTCGTGTTCGTGACCTCCG
TCGGGTCCATCGTCTTCTCCGCCCTCGCGGCCGGCGCCGCGCTCGCCTGCGCGCATGGCGCGTTCCGGGTGCCCGAGGAA
CAGCTCTTCCTCGACGACGACATACAGCCTGGCGCTGGAGGAAGAGTGGGCTCCTCCGTCGACCTGCTCTCCTTCTTCAC
CAACGCCGCCGGAGGAGGAGGTGGACGCGGCTGA----------------------------------------------
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>chr5B_1_TraesCS5B01G150200
ACGAGTCCACATCCCATAACAAGATGCATATCAGATCATGATTTTTTTTCCAGATGCATCAGAATCTTCGAGATCAACAA
GTGCGTGTGCATCTACTCAATGACCTTGTGGAGTGTATGTGGATCCACAATGAAACAAAGGAGGAAACCAATGAGTTTAA
TGTCTGAATTGTGCACTTAAAAAAACATGTTTGAACTATGTATTTTTTTTTCCTATGAACAAATGTTATTTACATGTGAT
ATTCATGTGTATGATGGACATGCATGTATTTGAGGGTTTAGATATGAGGAGTGGCTATCCGGCAGGAAATATGAGGGGCC
GTCCAACGCTTTCCAGGGACACTCCTGAGCGCGTCCGCAGACCTTTAGGGGGCGGATTTGCCAAAGTCGGATTGTAAATG
CTCTTAGGGCTAGTGTTTCTCTAGTGGAGTCTGGCCGATGCCGCCATTATTCTCGAGCAGTGTCCAGTGACTTCGTCGAG
TGTAGGCCGTTGATTTTGTTAGTTTATATAGGTCCTTGTTTTTCAGGTGGCATTGACGAAGTGCTGACGATGATGGCAAA
TTGTAACAAAGGTCCCTCTATCTTTGCTGGCGAAGTGGAGAAGACTGCGTGTGCTTTTGGTGACTTCATCAATCTCATGA
TGATACGATGACTTAGTCTCTCGAAAGTGTTCATAGGGATAGAGTATATACGTGTGTGCATAGGAATATGTGTATGCACG
TATATATATGAGCACGTGGACGCTGTATTTCACTAGCAATCTCAAACTGATTCCTGGTCTAGCCAAACTACTTGTCAGCG
TTTACAAATTCAGCTTGAATATAT-----CCAGGTCAGGTCAAATTATGCGACAGAAATGTCAACGCG------------
G------AGAGAGAGACGAGGCTGACCGTTGAC-------CTTTGCTTGTTAACAGAGAGGGAAACGCGCGCCATCGTAC
GTTACTCCTAAACATACTTCTCTCCCAGATAAAGAAAACATTATTCTCTACGGTGG---CATCCATCGACGCCATGGCTG
CGGCTTCTCCTCCCCTCCTCCCCGTCTCCGTTCTCCCGGCGGCCACCACCGCGACCACCACCATCGTCCTCCCCGTTCCG
GACACCTCCTCGGCGGCCGACCAGCGCGCCTACCTCTCCCGCCTCCTCGACTCCGCCAAGCGCTCCCTCTCCGGCGCGCG
CCCGTGGGCGGAGCTCCTCGACCGCGCGGCGCTCAGCCGCCCGGAATCCCTCGCCGACGCCACCGCCCGCGTCCGCAGGA
ACCTCGCCTACTTCCGCGTCAACTACGCTCTCCTCGTCGCGTTCTCCCTCGCCGCCTCCCTCCTCGCGCACCCGTTCGCG
CTCGCCGCCCTGCTCGCGCTCCTCGCCGCCTGGTGCGCGCTCTACCTCCTCCGCGCCGCCGACGCACCCCCGCTGGAGGC
CTTTGGGAAGACCTTCTCCGAGAGGGAGACGCTGGGCGGGCTCTTGGCGGCGTCGGCGTTCGTCGTGTTCGTGACCTCCG
TCGGGTCCATCGTCTTCTCCGCCCTCGCGGCCGGCGCCGCGCTCGCCTGCGCGCATGGCGCGTTCCGGGTGCCCGAGGAA
CAGCTCTTCCTCGACGACGACATACAGCCTGGCGCTGGAGGAAGAGTGGGCTCCTCCGTCGACCTGCTCTCCTTCTTCAC
CAACGCCGCCGGAGGAGGAGGTGGACGCGGCTGAGGCGCCCCACGTCATGCCGTCGACTGATTCATTCTCGAGAAATAC-
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--------------------------------ACGAGACACCATATGTGTTGCTAGTTAGCTACACC-------------
-----------ATTACATTTAGGATTTTATACGATTCAAAAAGAA---ATAGGAAATTTAGAGAAACACACTATTTATGA
ATTATTTCTCTGTGGATTATTTGAT-CCTAGAATCGAATCATATATGATTTTTTTTCTAAGAATTTATTTGCATTATGTT
TGTAGGAAATGTTTCGTCTATTCAAATC----GAAATGAAATATTGGTTTCTCATATGGTGTAATCAATCAAACTTTGGT
GCAAACAATCCATGTACGATTCGAATGGACATGACCTGAAATCAATAATCCTCACTTATTCTATTCTTGCGATTTCCAGA
ATCAAGCAAATCAAAGATACACCTAATTTTGATTTGTTATACATTTGCAAGTTACCTCACATAAACTTGTGTGTGTAAAC
TAGGCCAACTGACGGACCGAGGGACATAAAGGTACATTTCTCGTATGAGTAATTGATTAAAAAGATAGACTTGAGTGTGC
ATATTTTTATGTTATATATTGTGTTCACGTTGAAAATTAATTGTCTTACAACATATCAAGAAAAAAGAATAAATAATCAG
ATTTTTAGAAACAAAACAAATAGAAGAAATAAATTAAATTTTAATGAAGAAATGAACAAAATACAGGAAATGAAAATTAA
ATTTCAATCTAAGAAAGAAAGAATCGTGGAAGTGGTGTTATCCAAAAGTGGCAATGTGAAAAAAAAAAGAGAAACAAATA
GTAATAAAAAATCAATCAAAGGAGGAAAGAGTTCTAGAAGTGATTTTACCCCACGAATGAAAGACGACAAAAATAAAGAA
TAACAATACTTCTTTCTATGGAAGAATGGATTATGGGATTGTTTTAACCCTAAAAGAAAAAAAACACGGTTTTATGAAAG
AAATTAATATTATACAACTATGCCTAACATGAACAATCATGAATACTTGTTGGCAAACT
>chr5A_744
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-----------------------TGTATTTCACCAGCAATCTCAAACTGATGCCTAGTCTAGCCAAACTACTTATCAGCG
TTTACAAATTCAGCTTGAATGTATATCTACCAGTTCAGGTCAAATTAGGAGACAGAAATGTCAACTCG------------
GAGAGAGAGAGAGAGACCAGGCTGACCGTTGAC-------CTTTGCTTGTTAACAGAGAGGGAAACGCGCGCCATCGTTC
GTCGCTCCTAAACATTCTTCTCTCCCAGATAAAGAAAACATTATTCTCTACGGTGGTGGCATCCACCGACGCCATGGCCG
CGGCTTCTCCTCCCCTCCTCCCCGTCTCCGTTATCCCGGCGGCCACCGCCGCGACCGCCACCATCGTCCTCCCCGCCCCG
GACACCTCCTCGGCGGCCAACCAGCGCGCCTATCTCGCCCGCCTCCTCGACTCCGCCAAGCGCTCCCTCTCCGGCGCGCG
CCCGTGGGCCGAGCTCCTCGACCGCGCGGCGCTCAGCCGCCCGGACTCCCTCGCCGACGCCACCGCCCGCGTCCGCAGGA
ACCTCGCCTACTTCCGCGTCAACTACGCCCTCCTCGTCGCGCTCTCCCTCGCCGCCTCCCTCCTGGCGCACCCGTTCGCG
CTCGCCGCCCTGCTCGCGCTCCTCGCCGCCTGGTGCGCGCTCTACCTCCTCCGCCCCGCCGACGCGCCCCCGCTGGCGGC
CTTTGGGAAGACCTTCTCCGAGAGGGAGACGCTGGGCGGGCTCTTGGCGGCGTCGGCGTTCGTCGTCTTCGTGACCTCCG
TCGGGTCCATCGTCTTCTCCGCCCTCGCGGCCGGCGCCGTGCTCGCCTGCGCGCACGGCGCGTTCCGGGTGCCCGAGGAA
CAGCTCTTCCTCGACGACGACCTGCAGCCTGGCGCTGGAGGAAGAGCGGGCTCCTCCGTCGACCTGCTCTCCTTCTTCAC
CAACGCCGCGGGAGGAGGAGGCGGGCGCGGCTGAGGCGCCCCACGTCATGCCGTCGACTGATTCATTCTTGAGAAATAC-
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--------------------------------ACGAGACACCATATGTGTTGCTAGTTAGCTACACCTACATACACTAAA
TGAATTTTTTAATTGCATTTAGGATTTTATACGATTCAAAATATTTTTATAGGAAATTTGGAGAAACAAAACATTCATGA
ATTATTTGTTTGTGGATTGTTCGATGCCTAGAATTGAATTATATATGG-TTTTTTTCTAAGAATTTATTTGCATTGTGTT
TCTAGGAAATGTTTCATCTATTCAAAACTCATGAAATGAATTATTGGTTTCTCATCTGGGGTAA----------------
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>chr5D_744
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-----------------------TGTATTTCACCAGCAATCTGAAACTGATCCCTGGTCTAGCCAAACTACTTATCAGCG
TTTACAAATTCAGCTTGAATTTATCC--ACCAGTTCAGGTCAAATTAGGAGACAGAAATGTCAACGCGGAGGGGGGGAGA
GAGAGAGAGAGAGAGACGAGGCTGACCGTTGACGGTTGACCTTTGCTTGTTAACAGAGAGGGAAACGCGCGCCATCGTTC
ATCGCTCCTAAACATTCTTCTCTCCCAGATAC----------------------GGTGGCATCCACCGACGCCATGGCCG
CGGCTTCTCCTCCCCTCCTCCCCGTCTCCGTCCTCCCGGCGGCCACCGCCGCGACCGCCACCATCGTCCTCCCCGTTCCG
GACACCTCCTCGGCGGCCGACCAGCGCGCCTACCTCGCCCGCCTCCTCGACTCCGCCAAGCGCTCCCTCTCCGGCGCGCG
CCCGTGGGCGGAGCTCCTCCACCGCGCGGCGCTCAGCCGCCCGGACTCCCTCGCCGACGCCACCGCCCGCGTCCGCAGGA
ACCTCGCCTACTTCCGCGTCAACTACGCCCTCCTCGTCGCGCTCTCCCTCGCCGCCTCCCTCCTCGCGCACCCGTTCGCG
CTCGCCGCCCTGCTCGCGCTCCTCGCCGCCTGGTGCGCGCTCTACCTCCTCCGCCCCGCCGACGCGCCCCCGCTCGCGGC
CTTTGGGAAGACCTTCTCCGAGAGGGAGACGCTGGGCGGGCTCCTGGCGGCGTCGGCGTTCGTCGTCTTCGTGACCTCCG
TCGGGTCCATCGTCTTCTCCGCCCTCGCGGCCGGCGCCGCGCTCGCCTGCGCGCACGGCGCGTTCCGGGTGCCCGAGGAA
CAGCTCTTCCTCGACGACGACCTGCAGCCTGGCGCTGGAGGAAGAGCGGGCTCCTCCGTCGACCTGCTCTCCTTCTTCAC
CAACGCCGCCGGAGGAGGAGGCGGGCGCGGCTGAGGCGCCCCACGTCATTCCGTCGACTGATTCATTCTTGAGAAATACT
TCATCGGTTCTAAATTACTTGTCGAAGGAATTGATGTATCTAGACGTATTTTAATTCTAGATACATCTAACTTTATCCTT
TTGCGACAACTAATTCCGAACCGAGCGAGCATACGAGACACCATATGTGTTGCTAGTTAGCTACACCTACGTACACTAAA
TGAATTTTTTAATTACATTTAGGATTTTATACGATTCAAAAGATTTTTATAGGAAATTTGGAGAAACAAAATATTTATGA
ATTATTTCTCTGTGGATTGTTTGATACCTAGAATTGAATTATATATGA-TATTTTTCTAAGAATTTATTTGCATTGTGTT
TCTAGGAAATGTTTCATCTATTCAAAACTCATGAAATGAATTATTGGTTTCTCATATGGTGTAA----------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSS----------S-----------------S---------------------S------
--------------------S------------S-------------S-S------------------------------
------------------------------------------------------------------------------S-
--SS-----------S-------------------------------------------------S------------S-
-----------------------------------------------S--------S-----------------------
------------------------------------S-------------------------------------------
---------------------------------------------S----------------------------------
----------------------------S------------S--------------------------------------
------------------------------------------------------S----------S----------S---
------------------------------------------------------------------S-------------
-------------------------------------------------------S------------------------
---------------------S-S----------------------S---------------------------------
---------------------S--S--------------------------------------------S----------
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-----------------------------------------SSSS--------------S--------S-S---------
------------------S---------------S----S--------S--------------------------S----
-S-------------S----------S-------------S-----------------------SSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_473
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-----------------------------------------------------CGAGCAGTGTCCAGTGACTT-------
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>reverse_2333
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------------CGGACCGAGGGACATAAAGG------------------------------------------------
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