>input_sequence_71918
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----------------------------------------ATGGAGGATCTCCCGGAGGCACTGCTGGCAGAGATCATCA
AGAGGGTTACCAAAAGAAGTGACTTGAATTCTCTTTCCCTTGTCTCGAAGCGTCTCTTCGCCATCCAGGCTGAGCAAAAG
GGGTCCATCCGGGTTGGTTGTGGCCTTTGCCTTGCCACTGAAGCTTTGGTGTCACTCTTCTCCCGGTTCCCCAATTTGTG
GAAAGTTGAGATCGATTATGCTGGCTGGACACCTTCCCACGGGGATCAGTTGGACAACCATGACCTCTTTGTGATTATAT
CTTGCTGTCCCTCTCTAACCGATCTCACACTAAGTTTCTGTTCACAAATCGATGACACCGGTCTTGGTTATCTATGCTAC
AGCGAGAAATTGACTTCCCTCAGGCTGAACTCTGCAACTGAAATAACTTCTTGTGGACTTCTCTCGGTTGCAGTTGGTTG
CAAGAGTCTGTCTTCCCTCCACCTTATCAACTGTGAGAAAGTAGGCAGTACCGAGTGGCTGGAGTATCTAGGCTTGAATG
GATCATTGGAAGAATTTGTACTCAAGAATTGCAATGGAATCAGCCTGTATGACCTCATAATGCTTGGTCCAGGATGGATG
AAGCTACGCAAGTTTGAATTTCGAATGGGAGGATTATGGGATGTTCATGAGGGATATGATCATATGGAAATCGATGGTTA
G-------------------------------------------------------------------------------
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>chr5A_1_TraesCS5A01G099900
CTGCTTCGATCGAGAGACGAAGAGGAGATCGAGCGGATTGCTTCGATCGAACAGACGGATCAAAAAGCACGAGTTGCAGC
GTGCAAAAAATTGACCTAGCTCTAATACCATGTTAGGAATATGCAACTTGTATTCCCATGAGGCCATAGGCCGATATATA
TATACATGTACAGGTGTGGAACATATGCAGGAAACCCCTCATACAACGAGATAAATATAAAGGGGTACATGACTTATATT
ATAACTCTAACACGGCTCTCGCGCCTCCGGTGGCTCGTCAAGCTCAGCCCGACGGCTGGATTCCCGTGCACTGACGCGCT
CGACCTGCAGCCCGAGATGCTCAAAGCTGCTGCCCGTGCCCGTTGCCCCCACCACCGTTGTCGTGGGACAATCCACCAGC
CGAGCCAGGGACAACGCTCGATCAGGAGCTGTCGAGGTCGTGGGCAGAGGAGAGGACGGCGAGGCAGAGATAGGAGAGGA
AGGCAGGCAGGGGAGAGGGGGGAGTGCGAGGCGAAGGACCGGCGATGTTGGTTTTGCTCGAACAGGAGATCTTTATTTTT
AGAGGAAGGGACGGAAGGTTAGAGAAGAAGGGAGGCGTGGTGGGCGCACGACCCGGTCAAAATCAGGGTCACCCATCCAA
ATTAATTCTCCTCAATTGATTCTTAACCCTTCCACCCCTAGGGAGCTTAGTGATATAGTAGATATGAATTATCTCTAATG
TGATTAGGTTATCTTCATATGCTTCATTTTGATCTCATTATAATTGCTATACAAGCTGCGAAGTCAGCAAGTACTGAATT
CAGTTTATTGTTGATGATGCGCTTAGTAGATTCTTTCTTTGCTCAGCAATCTGATGAACACACCAATTGTCAATTGATAC
TGAAGAGGGTTCAAAATCATCTCTAATGTGGGTAAATTATCTTCATATGCTTCATTTTGATCTCATTATAGTTTATGTTT
TAGTCCAGCATTCTGGATACCCAATCCCAACTAGCACTCGATGGAGGATCTCCCGGAGGCACTGCTGGCAGAGATCATCA
AGAGGGTTACCAAAAGAAGTGACTTGAATTCTCTTTCCCTTGTCTCGAAGCGTCTCTTCGCCATCCAGGCTGAGCAAAAG
GGGTCCATCCGGGTTGGTTGTGGCCTTTGCCTTGCCACTGAAGCTTTGGTGTCACTCTTCTCCCGGTTCCCCAATTTGTG
GAAAGTTGAGATCGATTATGCTGGCTGGACACCTTCCCACGGGGATCAGTTGGACAACCATGACCTCTTTGTGATTATAT
CTTGCTGTCCCTCTCTAACCGATCTCACACTAAGTTTCTGTTCACAAATCGATGACACCGGTCTTGGTTATCTATGCTAC
AGCGAGAAATTGACTTCCCTCAGGCTGAACTCTGCAACTGAAATAACTTCTTGTGGACTTCTCTCGGTTGCAGTTGGTTG
CAAGAGTCTGTCTTCCCTCCACCTTATCAACTGTGAGAAAGTAGGCAGTACCGAGTGGCTGGAGTATCTAGGCTTGAATG
GATCATTGGAAGAATTTGTACTCAAGAATTGCAATGGAATCAGCCTGTATGACCTCATAATGCTTGGTCCAGGATGGATG
AAGCTACGCAAGTTTGAATTTCGAATGGGAGGATTATGGGATGTTCATGAGGGATATGATCATATGGAAATCGATGGTTA
GTCATGAAGCTGACAATTGATGTTTCATGCTGCCATGATTGTTGTTTGGCTTGTGAGCAGTTAATTTGGGGAAAATTGCC
AGGGAGAAGAATGAGATTTCGAGGGTCTTCTAGTTGATTATTTTTA----------------------------------
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--------------------------------------------------------------TTAAGATGTCATGCTGTA
ACATCTGTCACCAAGAGACTTAACACAACAAATTATCGGAGCTTTCATCAATTAAAACATCAACATCCTGGACCATTACA
CTGTGGAAAACGTACAGAAATGCCGGCCATGCAGTTGCTCTGGCTAGTGCATGGCCTGAGAAGCAGGAGGGAACATGCAG
GAGAAAACTACTTGCCGGTACTTTATCCCTTGTTAATTCATGTTACTTTTCTGGAACAAATGTAAGATGGCATGGTCAGT
TGTTCTGCTATGGTGGAATTCAGGATCCCATATCAGAAGAATTTACTAGAGGACTGTTGATGACTTGTTTCCTCAGATTA
TTCCAGATGCAGAAGTAAACTCGGAAGAGAAAGATGATAGCATGGTAGCATCTTCAAATGGTATGGGGTGCACAGCCCTG
AAAGTATGGAATTAGTATACACTAGGTGGTTTTCCCATGTTACTTGAAGGCTATCATCTTTTATGGAGCAGTCTACTCTC
GGAAGGTATGCATCACAGTC--TGTTGTTTTATGATGCCTAAGTGGACCTTATTTTGCATGTGTGATCAGGCTTCACCTT
TTGTCCAAAAAAAAATCAGGCTTCACCTCTTTATATAACAAATTCTCCTATTCAATATTCCAGCCCAAAATGGGAGAATT
AACAGCACGATCGGTTTAAGTGGCAGGAGCTCACGGTCTTCATCAGCTAGTTGCCCATGGGGTCAGTGGTGAAATGTAGC
TGAAGAAATCTCTCTGTATTCTGCAATTGGATGAAATTTGGGCAGCCATGTGCCCATGTGGGTCTCAGAAGGCAAAACAA
AAAGCTATTGAGATGATGCTTGATAAGTTATTGCAAATTTTCAGTGTGGTTTGCAGCTG
>chr5D_702
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-------------------------------------------------------------ATATGAATTATCTCTAATG
TGATTAGGTTATCTTCATATGCTTCATTTTGATCTCATTATAATTTCTATACAAGATGCGAAGTCAGCAAGTACTGAATT
CAGCTTATTGTTGATGATGCGTTTAGTAGATTCTTTCTTTGCTCAGCAATTTGATGAACACACCAATTAACAATTGATAC
TGAAGGGGGTTCAAAATTATCTCTAATGTGGGTAAATTATCTTCATATGCTTCATTTTGATCTCATTATAGTTTATGTTT
TAGTCCAGCATTCTGGATACCCAATCCCAACTAGCACTCGATGGAGGATCTCCCGGAGGCACTGCTGGCAGAGATCATCA
AGAGGGTTACCAAAAGAAGTGACTTGAATTCTCTTTCCCTTGTCTCGAAGCGTCTCTTCGCCATCCAGGCTGAGCAAAAA
GGGTCCATCCGGGTTGGTTGTGGCCTTTGCCTTGCCACTGAAGCTTTGGTGTCACTCTTCTCCCGGTTCCCCAATTTGTG
GAAAGTAGAGATCGATTACGCTGGCTGGACACCTTCCCACGGGGATCAGTTGGACAACCATGACTTCTTTGTGATTATAT
CTTGCTGTCCCTCTCTAACCGATCTCACACTAAGTTTCTGTTCACAAATCGATGACACCGGTCTTGGTTATCTATGCTAC
AGCGAGAAATTGACTTCCCTCAGGCTGAACTCTGCAACTGAAATAACTTCTAGTGGACTTCTCTCGGTCGCAGTTGGTTG
CAAGAGTCTGTCTTCCCTCCACCTTATAAACTGTGAGAAAGTAGGCAGTACCGAGTGGCTGGAGTATCTAGGCTTGAATG
GATCGTTGGAAGAACTTGTACTCAGGAATTGCAATGGAATCAGCCTGTATGACCTCATAATGCTCGGTCCAGGATGGATG
AAGCTACGTAAGTTTGAATTTCGAATGGGAGGATTATGGGATGTTCATGAGGGATATGATCATATGGAAATCGATGGTTA
GTCATGAAGCTGACAATTGATGTTTCATGCTGCCATGATTGTTGTTTGGCTTGTGAGCAGTTAATTTGGGGAAAATTGCC
AGGGAGAAGAATGAGATTTCGAGGGTCTTCTAGTTGATTATTTTTAGGGAAAACTTTGTTTTTGCCACTCTAGCTTTTGC
CCACTTTGCTTATGCCACTCTAGAATTTGACATTTCACTTTTGCCACTCTTAGCTTTCGACAATACATCACTTTTGCCAT
TCTGTGGCAAAAGCAAAATTCTCAAAGTGGCAATTGTGATACATCGCAAAAGCTAAGAGTGGCAAAAGTGAAATGAAAAA
TTATCATTTTTGCCATGGAATGGCATTTGTGATGTATTGTCAAAAGCTAAGAGTGGCAAAAGTGAGATGTCAAATTCTAG
AGTGGCATAAGCAAAGTGGGCAAAAACCAGAGTGGCAAAAACAAAGTTTTCCCTTTTTTTTATTAAGATGTCATGCTGTA
ATATCTGTCACCAAGAGACTTAACACAACAAATTATTGGAGCTTTCATCAATTAAAACATCAACATCCTGGACCATTACA
CTGGAAAACA-GTACAGAAATGCCGGCCATGCAG----------------------------------------------
----------CTTGCCGGTACTTTGTCCCTTGTTAATTCATGTTACTTTTCTGGAACAAATGTAAGATGGCATGGTCTGT
TGTTCTGCTATGGTGGAATTCAGGATCCTATATCAGAAGAATTTACTAGAGGACTGTTGATCACTTGTTTCCACAGATTA
TTCCAGATGCAGAAGTAAACTCAGAAGAGAAAGATGACAGGATGTTAGCATCTTCAAATGGTATGGGGTGCACAGCCCTG
AAAGTATGGAATTAGTATACACTAGGTGGTTTTCGCATGTTACTTGAAGGCTATCATCCTTTATGGAGCAGTCTACTCTC
GGAAGGTATGCATCACAGTCTGTGTTGTTTTATGATGCCTAAGTGGACCTTATTTTGCATGTGTGATCAGGCTTCACCTT
TTGTGCAAAAAAT-ATCAGGCTTCACCTCTTTATATAACAAATTCTCCTATTCAATATTCCAGCCCAAAATGGGAGAATT
AACAGCACGATCGGTTTAAGTGGCAGGTGCTCACGGTCTTCATCAGCTAGTTGCCCATGGGGTCAGTGGTGAAATGTAGC
TGAAGAAATCTCTCTGTATTCTGCAATTGGATGAAATTTGGGCAGCCATGTG--------GGTCTCAGAAGGCAAAACAA
AAAGCTATTGAGATGATGCTTGATAAGTTATTGCAAACTTTCACTGTGGTTTGCAGCTG
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------
---------------------------------------------S---------S------------------------
---S-----------------S----------------------------S-----------------SS----------
-----S-----------S--------------------------------------------------------------
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------S-----------S---------------------------------------------S---------------
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---------------------------------------------------S----------------S-----------
---------------------------S----------------------------------------------------
----S---------S---------S---------------------------------------S---------------
--------S-----------------------------------------------------------------------
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-S----------------------------------S-------------------------------------------
---SSS--S-S-----------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSS--------------S----------------------------------------------------S--
----------------------------S--------------------------------S----------S-------
----------------------S--------------S--S---S-----------------------------------
----------------------------------S-----------------------S---------------------
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----S-------SS------------------------------------------------------------------
---------------------------S----------------------------------------------------
----------------------------------------------------SSSSSSSS--------------------
-------------------------------------S-----S---------------
>forward_489
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---------------------------------------------------------------------ATAGGAGAGGA
AGGCAGGCA-----------------------------------------------------------------------
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>reverse_1412
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---------------------------------------------------TGTGGACTTCTCTCGGTTGC---------
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>forward_631
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---------------------------------------------------CCCGGTCAAAATCAGGGTCA---------
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>reverse_2299
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----------------------------------------------------------AGAAGCAGGAGGGAACATGC--
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