>input_sequence_71912
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---------------------------------------------------------------------ATGGCAGCCCT
CCACACGATCCACCAGCACAATGAGCGTGACCTCGAGGCAGGGCACGCTACGCCGCCGTCATCGCTCGTCACGGGCAAGG
CC------------------CGTCGGCGCAACAGCTGCCGCCGGTTCGCCTGCGTCGCCCTTGTCGCCGTGGCAGCCCTC
GCCGTCGCCCTC---GCGGGCGTCCTCGGGGCTCTTTACCTGGCGCTCGACCCGAAGATGCCCCTCTACACGGTGCACGC
GCTCAACGTGACAGCCTTCGGCATGGACGACGACATGACCGCGCGCGCGCGCTTCGACGCGGCGGTCCGGTTCGAGAACC
CCAACCGCGTCATCGGCATCTCGTACGAGGAGGGGTCCAGCCTCGCCGTGTGGTACGGCGGGTACCGGCTGTCCGAGGGC
GCGCTGCCGGCCTTCTACCAGGGCCACCGCGACGCCGCGGTCGTGCACGTCGCCATGAGCGAGGCGCGGCTGGGTGGCAC
GGGGGTCGTGGAGGCCATGCGGCACGTGAACGCGGCCGGCGGCGAGCTGCCGCTGGTGTTCCGCGGCGAGGTGCCGGTGC
GGGTCAAGGTCGGGCCGGTGACGACCGCCAAGGTGACGCCCCGTGTCCGGTGCGACCTGGTGCTGGACAGGCTGAG----
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-------------------------------------------------------CACCGAGGGCGGCATCCGGATCAAG
ACGATGAGCTGCAACTTGAAGTTATGGTGA--------------------------------------------------
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------
>chr4A_1_TraesCS4A01G217000
TGCCGATTCCTCAAAAAAAAGTGTGACGGTGGTCTGCTTTTTCCACAAATAAAGAAAACACAAGGATGCTTTATGCAAAA
ATACGCCGGCTAAGTGCCATTAGTCACTGACAGGTGGGACCATAATCACGAATACGTCCTCTTACGTATTTTGTGACTGT
ATGTGCATGCTTGAATCGAGTTAAGTGACTACAAATACGTATTTTTAAAGTTCTAACACTAAACTGAACATTGAGCACAA
GTTCTACGACTTGGGGTGATATTACCT-AAAAAAATTGACCAAAGAAGGGTTTCCCCCTCTGATTTCCATTAAGGGAAAC
CAATAAAC--GAGCTACAAGCACCAATTCTTACGACTCAGCTACTACTTCCTCCATTTCAATTTACAAATCCTACGCGTA
TATCTAGGTTGTCAATTTTACCACTCTAATATAAACTATATAACACAAAAATTATACGGTTCGAAAATAGAACATTTGAA
GTTTATATTGGTATATCTTTTATAATATATGACTTGTATTAGGTTAGTTATAAATTAACGACTTAGAGGTACGCGCACAC
CTATGAGAGAGGGAGTACTATTAAACCGCCTAGTTTCCCAATATGATTCTGAATTAATGTGGTATTCTATTCGAGCACGC
TGGCCATGATCACCCTAATCCGGGGATATCTTGCACGTACGATTACTGTAAAT---------------------------
------ACTTCAACTTAGAAAACAGTT-----------------------------------------------------
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-------------------------------------------------------------TGCGCTCAGACACACCTAA
AC-CGTCAACTGTATGTACGTACTCCTAG------CATGGTTCGCTGTGATCCCCTGTCAGACTCGGCTGCGAACTATAG
------CCCTACGTAGAAACTCTTCCCGTCTCGGCTTTGCGCGCCCGTTCGCAACACTCATACCTCTTT------ATATA
GTATCTTGTAC--------GTACATCACCAGCTGACTAAATCCCTCAAT--TGTCTGTGGAAATCACGGCGGGAACGACC
CATCGTCGTT-----TTAGA-----CATCGATCGACAACGGAGTACCGCGCGCTGTGTACGAGGCATGCATGGCAGCCCT
CCACACGATCCACCAGCACAATGAGCGTGACCTCGAGGCAGGGCACGCTACGCCGCCGTCATCGCTCGTCACGGGCAAGG
CC------------------CGTCGGCGCAACAGCTGCCGCCGGTTCGCCTGCGTCGCCCTTGTCGCCGTGGCAGCCCTC
GCCGTCGCCCTC---GCGGGCGTCCTCGGGGCTCTTTACCTGGCGCTCGACCCGAAGATGCCCCTCTACACGGTGCACGC
GCTCAACGTGACAGCCTTCGGCATGGACGACGACATGACCGCGCGCGCGCGCTTCGACGCGGCGGTCCGGTTCGAGAACC
CCAACCGCGTCATCGGCATCTCGTACGAGGAGGGGTCCAGCCTCGCCGTGTGGTACGGCGGGTACCGGCTGTCCGAGGGC
GCGCTGCCGGCCTTCTACCAGGGCCACCGCGACGCCGCGGTCGTGCACGTCGCCATGAGCGAGGCGCGGCTGGGTGGCAC
GGGGGTCGTGGAGGCCATGCGGCACGTGAACGCGGCCGGCGGCGAGCTGCCGCTGGTGTTCCGCGGCGAGGTGCCGGTGC
GGGTCAAGGTCGGGCCGGTGACGACCGCCAAGGTGACGCCCCGTGTCCGGTGCGACCTGGTGCTGGACAGGCTGAG----
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-------------------------------------------------------CACCGAGGGCGGCATCCGGATCAAG
ACGATGAGCTGCAACTTGAAGTTATGGTGATCCGGACCGGGCTTTGCCGTT----------------AAACGACACACTA
CTAC----------------------------------------------------------------------------
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--------TGTAT-ATGTGAAGCGTACAATGAGT--------TATGTA---TATAGTACTACTAGTATATAGATGATCAA
AAAAATTTGTAAATAGTACTAGTAACTTTCTTCTTTCTCTGATTAGAATTTTGTTTATACAAGAATATCCTTTGGTTTGT
TTGTATCGATAGTTCAATCAGCAAAAACACATAAATACACGCATCGTGCTATCGCCTATATATCCATCAGGGGACTGAAA
ATGTCCCCTCTGTCAATCGATTCTTCCTCCTCCTTCCTCAACAGTCAAATGTCAATCCAATGATTGCAAAAAGGTGCATT
GTTTATTTTCTTTCTCCCACACGCCCTTTCTACATCCCATGACATGGCCACCTTCTTCCTTCTCCCTCCTCCCGCCTCGT
CCAGCCCCACCCTGCGTTGGCCAAACAATTGTCCGTTGCCACTCACAACCGGAGCGCCT------------GCCACCTTG
CCATGCTTGATCCACGGTCTCCGTCATGCCTCCGCCGCACTCAGCCATCCTTTTAAAACCGCATGAAAAAACTAGAGGGA
CAAGCAACCTACCAGTGA----TCTAGATGAGATCTAAACCGAGATAGAAGGGGGCGCAACAAGCGGGGAGAGTGCTCGA
CCAGGTGGGAAAGGTCTGTGTATCCTCCTGCTTTGCCCCCCATCTATATGTATATAGGTGGAGGAGGGTTGACCCTGCTA
GGGTTGCCTTGCCCCCCAAACAGGGGGCTCGTGCCCCTAGAGTTGCCTTGCCCATATGCATGTGGTGCACCCCACCCCAA
CTCAATCGCCTTACCCCCAAGCAAGGTTGGGTGCATCCTCGAT-------------------------------------
-----------CCTTACATACCAAAACACTCCATGGTATAACTAGACCCTCCCATAATACTTTCGGGACCATCCGAAAGA
CATTCGGAACCCTCTCTCTCATTCCCCATTATCTCATGTTTCAAGTTCGGCAATATGCAACCATGTACGGAACACCTTCT
GGTCAA
>chr4A_15
AAAAAT--------------GTGTGGCGGTGGTCTGCTTTTTCCACAAATAAAGAAAACACAAGGATGTTTTACGCAAAA
ATACGTCGGCTAAGTGCCATCAGTCACTGACAGGTGGGACCATAATCACAAATACATCCTCTTTCGTATTTTGTAACTGT
ATGTGCACGCTTGAATCGAGTTAAGTAACTATGAATCCGTATTTTTAAAATTCTAATACTAAATTGAACATTGAGCACAA
GTTCTACGATTCTGGGTGATTTTACCTCAAAAAAATTGACCAAAGAAGGGTTTCCCCCTCTGATTTCTATTAAGGGAAAC
CAATAAGCGAGAGCTACAAGCACCAGTAAGTTACGACATATGAAAAACACACCC--------------------------
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---------AGCTACTACTACTAAACCGCCTCATTTTCCAATATGATTCTGAATTAATGTGGTATTTTATTCAAGCGCGC
TGGCCATGATCACCGTAATCCGGGGATATCTTGCACGCACGATTACTGTAAAT---------------------------
------ACTTCAATTTAGAAAACAGTTGGTGCTTAGAGCATCTCCAGCCGTTGGCCCCCCAGAGGGCGGGGATGAACCGG
CGCAAAAACTCGGCCTGAGACCGAGTTGGTCCCCAGCCGCTGGTCCCAGGGCCGTTCCCAGGCGCGTTCAAAAAAATTAA
AAAATATAGCAAAGTTCAAAGTTCGGCGATGCGAGTGCACCGGCCGAGCGGTGTCTCTGCCGCGGGCTCAGCCTTGACGC
CGAGCAGCGCCGGACGAGTGTGAGGAAGAGCGGGAGGAGGAGGAAGAAGAGGAAGCGCCAAACCTCCTGGACAACCATTG
CCCGTCGCGTCGGCGGTGAGCCGTGGCCGTGGCGGCCGCCCTCGCCGGGGGGTATGCCAACGGCGGGTCGTTGCCGCCCT
CGAGGTACGTCAGAACGCCCTCGAGGGTGCGGCCGGGGACACCCCACCACAGGTGGCGTCCCTCGCTGTTCTTCGGTCCG
CCCACCACCGACGCGCCGTTGGTGGACGCCATCCTCTGCTGCTGCCGGCGCTGGAAGTACACCGTCCACGCCGCTATGTT
GTCGGCGGCGTACTCGGGGAGGGCGAGCTGGGCGTCGGCGAGGGAGGCGCGCACGACGTCGACCTCGTCGGTGAAGTAGC
CCGGTTTCGCCATGGCGTCGGGCAACGGGGAAATTAGCACTCCCCCGTTGCTGAGTCTCCACCCTGTTGTCCCGGCGCGC
ATGTCCGGCGGCGCCAGGATGTTCGCCTAGAACAGGAGTCAAGACTCCTGTTCGCGAAGCGATCGGCGGCCGAAGTCGTT
GGTCGCAGCCTCATCGCCGGGGAATCGCTCGGCCATCAGGAAGGAGGGAAAGGGAGGGCTCGGTGGCGGCGCTCGGGAGA
GGGAGGGCTCGGCGGCGGCGCTTGGGAGAGGTAGAGGACGGGGTAGGGCTGGTGTGGCTGGTGTGGCCAGAGGCGAGGGA
GGCCACCGGCTTATATAGCGGCGCCGCCCTGTGTGTACGCGTGCGAGGGAGGTGAGGCGTCAGCGCGCCGCCCGTGAGGA
ATCACTGGTAAGGCTGACCGGCGGCAGCCTTGCCATTGATTCCCCGCGGGAAACCGAGGCGTTCGGGGAAGAAGACGCGG
GGTGTCGCTGACGCGGCGGACCCACGGCTCTTTCGCGCCAAAACCGCTCGCCCCAGCGCCCCCGAACGCCCCCCAGCGCG
CCGGATTCGGTCTGGATCCGCCAGCGCTAAATTCGGTCCAGGCCGGCGAAAATCGGGCTCCTGAGGGCGTGACTGGGCCG
ATTTTTCTGCGCCGGCGCGAAGAAACGTCTGGGGAGGTTTTTATGAAGACGCGGCTGGACATGCTCTCAGACACACCTAA
AC-CGTCAACTGTACGTACTT----CTAG------CATGGTTCGTTGTGATCCCCTCTCAGACTCGGCTGCGAACACTTC
CCGTCTCGGCT--TAGAAACTCTTCCCGTTTCGGCTTTGCGCGCCCGTTCACAACACTCATACCTCTTT------ATATA
GTATCTTGTAC--------GTACATCACCAGCTGACTAAATCCCTCAAT--TGTCTGTGGAAATCACGGCGGGAACGACC
CATCGTCGCT-----TTAGA-----CATCGATCGAGAACGAAGTACCGCGCGCTGTGTACGAGGCATGCATGGCAGCCCT
CGACACGATCCACGAGCACAATGAGCGTGACCTCGAGGCAGGGCACGCTACGCCGCCGTCATCGCTCGTCGCGGACAAGG
CC------------------CGTCGGCGCAACAGCTGCCGCCGGTTCGCCTGCGTCGCCCTTGTCGCCGTGGTAGCCGTC
GCCCTCGCCCTC---GCGGCCGTCCTCGGGGCTCTTTACCTGGCGCTCGACCCGAAGATGCCCCTCTACACGGTGCACGC
GCTCAACGTGACAGCCTTCGGCATGGACGACGACATGACGGCGCGTGCGCGGTTCGACGCGGCGGTCCGGTTCGAGAACC
CCAACCGCGCCATCGGCATCTCGTACGAGGAGGGGTCCAGCCTCGCCGTGTGGTACGGCGGGTACCGGCTGTCCGAGGGC
GCGCTGCCGGCGTTCTACCAGGGCCACCACGACGCCGCGGTCGTGCACGTCGCCATGAGCGAGGCGCGGCTGGGTGGCAC
GGGGGTCGTGGAGGCCAT---------------GGCCGGCGGCGAGCTGCCGCTGGTGTTCCAAGGCGAGGTGCCGGTGC
GGGTCAAGGTCGGCCCGGTGACGACCGGCAAGGTGTCGCCCCGTGTCCGGTGCGACCTGGTGCTGGACAGGCTGAG----
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-------------------------------------------------------CACCGAGGGCGGGATCCGGGTCAAG
ACGATGAGCTGCAACTTGAAGTTATGGTGATCCGGACGGGGCTTTGCCGTT----------------AAACGACACACTA
GTGC----------------------------------------------------------------------------
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--------TGTTACATGTGAAGCGTACAATGAGT--------TATGTA---TATAGTACTACTAGTATATAGATGATCAA
AAAAATT-GTAAATAGTACTAGTAACTTTCTTCTTTCTCTGATTAGAATTTTGTTTATACAAGAATATCCTCTGGTTTGT
TTGTATCGATAGTTCAATCAGCAAAAACACATAAATACACGCATCGTGCTATCGCCTATATATTCATCACGGGACTGAAA
ATGTCCCCTCTGTCAATTGATTCTTCCTCCTCCCTCCTCAACAGTCAAATGTCAATCCAATGGTTGCAAAGAGGTGCATT
GTTTATTTTCTTTCTCCCACACGCCCTTTCTACATCCCATGACATGGCCACCTTCTTCCTTCTCCCTACTCCCGCCTCAT
CCACCCCG-CCCTGTGTTGGCCAAACAGTTGTCTGCTGCCACCCACAGCAGGTGCTGCTGCCCGGCGCCTCGCCACCCCG
CCCTGCTCGATCCATAGCCTCCGTCATGCCTCTGCCGCACTCAGCCATCCTTCTAAAACCGCAGGGAAAAACTAAAGGGA
GAAGCAGCCTAGCAAGGTTCAGTCTAGATGAGATCTAGACCGAGATAGAAGGGGGCGCAACAGGTAGGGAGAGTGCTCGA
CCGGGTGGGGGTGGTCTCTGTATCTTCCTTGTTTG-CCCCCATCTATATTTATATAGGTGGAGGGGGGTTGACCCTGCTA
GGGTTGCCT--CCCCCCAAACCGGG-------------------------------------------------------
-----TCACCTTGCCCCCAAGCAAGTTTGGATGCGTCCCAACAGGGTCTTCCAAAATGTTCTCGGCCCTTACAAAAACTT
TTGTCACCTTCCCATACATACTGGAACACTCCATGGTATCACTAGGCCCTCCTAGAATACTTTGGGGACCATCCAAAACA
CATTCGAAACCCTCCCTCCCATTCTCCGTTATCTCATGTTTCAAGCTTGATAATATGCAACCATGTACGGAACACCTTCC
GGTCAA
>chr4D_573
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---------------TACTACTAAACCGCCTTGTTTCCCAATATGATTCAGAATTAATGTGGTAGTCTATCCGAGCACGC
TGGCCATGATCATCGTAATCCAGGGATATCTTGCACGTACGATTACTGTACAT---------------------------
------ACTTCAACTTAGAAAACAGTT-----------------------------------------------------
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-------------------------------------------------------------TTCGCTCAGACACACCTAA
ACGGCTCAACTGTACG----------TACTCCTACCATGGTTCGCTGTGATCCCCTGTCAGACTCGGCTGCGAACTATAG
TCCTACTCCTACGTAGAAACTCTTCCCATCTCGGCTTTGCGCGCCCGTTCGCGACACTCATACCTCTCTATATAGATATA
GTATCTTGTAC--------GTACATCACCAGCTGAGTAAATCG--CAATTATACCTGTGAAAATCACGGCGCGAACGACT
CATCGTCGTT-----TTAGA-----CATCGATCGAGTACGAAGAACCGCGCGCTGTGTACGAGGCATGCATGCCAGCTCT
CGACACGATCCACGCGCACAATGAGCGTGACCTCGAGGCAGGGCACGCTACGCCGCCGTCATCGCTTGTCACGGGCAAGG
CC------------------CGTCGGCGCAACAGCTGCCGCCGGTTCGCCTGCGTCGCCCTTATCGCCGTGGCAGCCGTC
GCCATCGCCCTC---GCGGCCTTCCTTGGGACTCTCTACGTGGTGCTCGACCCGAAGATGCCCCTTTACACGGTGCACGC
GCTCAACGTGACAGCCTTCGGCATGGACGACGACATGACCGCGCGTGCGCGGTTCGACGCGGCGGTCCGGTTCGAGAATC
CGAACCGGGCCATCGGCATCTCGTACGAGGAGGGGTCCAGCCTCGCGGTGTGGTACTGCGGGTACCGGCTGTCTGAGGGC
GCGCTGCCGGCGTTCTACCAAGGGCACCGCGACGCCGCGGTTGTGCACGTCGCCATGAGCGAGGCGCGGCTGCATGGCAC
GGGGGTGGTGGAGGCCATGCGGCACGTGAACGCGGCCGGCGGCGAGCTGCCGCTGGTGTTCCGCGGCGAGGTGCCAGTGC
GGGTGAAGGTCGGGCCGGTGACGACCGGCAAGGTGACGCCCCGTGTCCGGTGCGACCTGGTGCTGGACAGGCTGAG----
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-------------------------------------------------------CACCGAGGGCGGGATCGGGGTCAAG
AGGATGAGCTGCAAGTTGAAGTTATGGTGATCCGG----GGCTTTGCCGTTCGATGGTTCAAATCGCAAACGACACACTA
GTAC----------------------------------------------------------------------------
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--------TG-TACATGTGAAGCGTACAATGAGT--------TATGTA---TATA-------------------------
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>chr4B_584
GTGATCA-------------------------------------------------------------------------
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-----------------------------------------------------CCTGTCGGATTCGGCTGCGAACTATAG
------TCCTACGTAGAAACTCTTCCCGTCTCGGCTTTGCGCGCCCGTTCGCGACGCTGATAC--CTCTATATAGATATA
GTATCTTGTACAGTACTACGTACATCACCAGCTGAGTAAATCCCTCAAT--TATCTGTGGAAGTCACGGCGCGAACGACT
CATCGTCGTT-----TTAGATTAGACATCGACCGAGAACGAAGTACCGCGCGCTGTGTACGAGGCATGCATGGCAGCCCT
CGACACGATCCACGAGCACAATGAGCGTGACCTCGAGGCAGGGCACGCTACGCCGCCGTCATCACTCGTCACGGACAAGG
CCCCTCGGCGGGAACGCGATCGTCGGCGCAACAGCTGCCGCCGGTTCGCCTGGGTCGCCCTTCTCGCCGTGGCAGCCCTC
GCCGTCGCCCTC---GCGGCCGTCCTCGGGGCTCTTTACCTGGTGCTCGACCCGAAGATGCCCCTTTACACGGTGCACGC
GCTCAACGTGACGGCCTTCGGCATGGACGACGACATGACCGCGCGTGCGCGCTTCGACGCGGCGGTCCGGTTCGAGAACC
CGAACCGCGCCATCGGCATCTCGTACGAGGAGGGGTCCAGCCTCGCGGTGTGGTACGACGGGTACCGGCTGTCCGAGGGC
GCGCTGCCGGCGTTCTACCAGGGGCACGGCGACGCCGCGGTTGTGCACGTCGCCATGAGCGAGGCGCGGCTGGGTGGCAC
GGGGGTGGTGGAGGCCATGCGGCACGTGAACGGGGCCGGCGGCGAGCTGCCGCTGGTGTTCCGCGGCGAGGTGCCGGTGC
GGGTGAAGGTCGGGCCGGTGACGACCGGCAAGGTGACGCCCCGTGTCCGGTGCGACCTGGTGCTGGACAGGCTGAGCACC
GAGGGCCGGATCGGGGTCAATAGGATGAGCTGCAACTTGAAGCTATGGTGATCCGGGGCTTTGCCGTTGGATGGTTCAAC
TCGCAAACGACACACTAGTACGTACTAGTAAATGTGAAGCGTACAATGAGTAAATGAGTTATGTATATAGTAGTAACTTT
CTTCTTTCTATGATCAGAAATTTGTTTATACAAGAATATCCTATGGTTTGTATCGATACTTCAATCAGCAAAAACACATA
AATACACGCATCGTGCTATCGCCTATATATTCATCAGGGGACTGAAAACGTTTCCTCTGTCAATCGATTCTTCCTCCCTC
CTCCCGAACATTCAAATGTCAATCCAACGGTTGCATAGAGGTGCACTGTTTATTTTTGTCCTCCCACACGCTCTTTCTTC
ATCTCAGGACATGGCTTTCGTATTTTAAATGAATTTTTGTCTTCTTTTATTTTCAAGTTTTCTCCTTGTTTTCCTAGGTT
TTGGAAAGAAAAAAATTGTGATTCTTTTGAGCAAAAGAAAATTATGCATCCATGAGATACACATATTTGCTTCCGTGAGA
AGCACATCCGTACTTCTAAAAAACAGCAATGCTTTTACGAGAAGTATGGATTTGCTCCCGCGAGAAGCACAACCAGAAAA
AAAATGCCTCCACAAGAAGCACAGTTGTGCTCCTCGAAAAAGAAAAAGAATTATGTGCTTACACGGGAGGAACATATTTG
CTTCTCCGAGTTGTGCTTCTCGGAAAATTATATGTTGCTTCTCGTGGAAGCATAGTTTTTCTACCAAAATGTGGTTAGCG
ATTAGTATTTAGCTAAATTTGCAAGAGCTGAAGGTAGAACAGTAGTTTGGTTGGGCTCTAGTCCCCCACGGGTTGTGGAC
TTGTGTAAACGGAATTGTAATTCCCTGAATCCTTGATTAATACAAGTCTTACTCGCAAAAAAAAAGAAGCACAAATTCTC
CAAAAAAAGGAGAAAAGCAATGTGTGCGCTCCAAAAAGATTGAAAAACCGCAACCACGCTTCCATGCTCTGTTTTTTCTT
CCATTTTTCGTGTTCATCTTTTTATGAACCACTTTTTTATTTTCATGTTTCGGGATTTATTTGTATCTTTTTTAGTTTTT
TATTTTCCATTTTTATTAAAAAATCGTCGAAACATATTAGCATGAGCTAGTTTCGATGATTTCAACGTGAGAAATCCAAC
ATTGAACAGGATGCAGGATTTGGACGGAAGGTACAAGACATAAAACATTTTCATAGATAAATTGAAAAACAGGACACCAG
ATTCCAACAAATGATGCATATTCAGTGTGCCCCTTATCAGCGACAAAGAAGGTGGGTGTTAGAGTATCTACAACCGCATT
TTGCAAATCTCACCCCTCAAACGTCTGCGGACGCGCCGGGTCAGTACTCGGGTGCATTCGCTTTGACCCCCTACTTTTTC
TGTCAGGCATCCGCACTCTTTAAAATTGTCATCCTTAACTTTAAACATTTTAACAAACAAGTAGCGACGACACCGCAGAG
CATGCACAGAGCACACTCGGACGCCAAGGCAAGCACGGATGGACGTGTCGCCGCACCAAGCATGCCATGCCCCACCGTGA
CATAGACATCGCGCCGTTGACGCGTGCCTACGCCATCGCCCCCGCCCCACGCCGCCATGCCCCACATAAGCATCACGCTT
GCTCAAAGCGGTTGCCTCCCGTGCCGCTACCATCCAAGAACAAGTGAAACAATACCCTGTCGGTGCCGGCGTTCGTCTGG
TCACGCCCTTTGGCGGGGACGAGGGGGCACGAGGAGAGCGGAGGGAGGGAGGCGGCGGAGTCGTGGGTCGCCTCGTTTCC
CAGTATGATTCTGAATTAATGTGGTATTCTATCCGAGCATGCCGGCCTGATCACCGTAATCTAGGGATATCTTGCACACA
CTCCCTCCGGTCTCTTTTACTCTGCATATGAGGTTTTTCTGAAGTCGAACTCTTCAAAGTTTGACCAAGTCTATATAAAA
AATTATTAACATTCACATAACAACACAAATATCAATAGATCCACCTTGAAATATATTTTCATAATATATTTATTAGGTAT
TATAGATGTTAATATTTTTTAATATAAATTTGATCAAACTTAGTAAAACTTAACTTCAGACAAATCTAAAACGCAAAGTA
AATAGGACCGGATGAAGTACGATTACCGTACATACTTCAACTTAGGAAAAAGTTTGCGCTCAGACACACCTAAACGCGTC
AAGTGATCCCCTGTCGGACTCGGCTGCGAACTATAGTCGTGAACGGGGGTGGGTGGCACGGGGGTGGTGGAGGCCATGCG
GCACGTGAACGGGGCCGGCGGCGAGCTGCCGCTGGTGTTCCAAGGCGAGGTGCCGGTGCGGGCGAAGGTCGGGCCGGTGA
CGACCGGCAAGGTGACGCCCCGTGTCCGGTGCGACCTGGTGCTGGACATGCTGAGCACCGAGGGCGGGATCGGGGTCAAG
AGGATGAGCTGCAAGTTGAAGTTATGGTGATCCGG----GGCTTTGCCGTTTGATGGTTCAAACCGCAAACGACACACTA
GTAC----------------------------------------------------------------------------
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--------TG-TACATGTGAAGCGTACAATGAGT--------TATGTA---CATA-------------------------
----------------TATAGTAGTA------------------------------------------------------
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>chr4B_612
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------------------------------------------------------TAATGTGGTATTCTATCCGAGCACGC
TGGCCATGATCACCGTAATCCAGGGATATCTTCCACGTACGATTACTGTACACACTTCAAATCTATTTTTTTGAAGTGCT
GTACACACTTCAATTTAGAAAACAGTT-----------------------------------------------------
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-------------------------------------------------------------TGCT---------------
----------------------CTCCTAC------CATGGTTCGGTGTGATCCCCTGTCAGACTCGGCTGCGAACTATAG
------CCCTACGTAGAAACACTTCCCGTCTCGGCTTTGCGCGCCCGTTCGCGACACTCATACCTCTCTATATAGATACA
GTATCTTGTAC--------GTACATCATCAGCTAACTAAATCCCTCAAT--TATCTGTGGAAATCACGGCGGGAACGACT
CATCGTCGTT-----TTAGA-----CATCGATCGAGTACGAAGAACCGCGCGCTGTGTACGAGGCATTCATGGCAGCTCT
CGACACGATCCACGAGCACAATGAGCGTGACCTCGAGGCAGGGCACGCTACGCCGCCGTCATCGCTCGTCACGGGCAAGG
CC------------------CGTCGGCGCAACAGCTGCCGCCGGTTCGCCTGCGTCGCCCTTCTCATCGTGGCAGCCGTC
GGCGTCGTCCTC---GCGGCCTTCCTCGGGGCTCTCTACGTGGCGCTCGACCCGAAGATGCCCCTTTACACGGTGCACGC
GCTCAACGTGACAGCCTTCGGCATGGACGACGACATGACCGCGCGTGCGCAGTTCGACGCGGCGGTCCAGTTCGAGAACC
CGAACCGCGCCATCGGCATCTCGTACGAGGAGGGGTCCAGCCTCGCGGTGTGGTACGGCGGGTACCGGCTGTCCGAGGGC
GCGCTGCCGGCGTTCTACCAGGGGCACGGCGACGCCGCGGTTGTGCACGTCGCCATGAGCGAGGCGCGGCTGGGTGGCAC
GGGGGTGGTGGAGGCCATGCGGCACGTGAACGGCGCTGGCGGCGAGCTGCCGCTGGTGTTCCAAGGGGAGGTGCCGGTGC
GGGTGAAGGTCGGGCCGGTGACGACCGGCAAGGTGACGCCCCGTGTCCGGTGCGACCTCGTGCTGGACAAGCTGAG----
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-------------------------------------------------------CACCGAGGGCCGGATCGGGGTCAAT
AGGATGAGCTGCAACTTGAAGCTATGGTGATCCGG----GGTTTTGCCGTTGGATGGTTCAACTGGCAAACGACACACTA
GTACGTACTACTCCCTCCGTTCGCAAATACTTGTCTTTCTAGGCATTTCAAATGAATTCAATATACAGATGTATGTAGAC
ATATTTTAAAGTGTAGATTCACTCATTTTGCGTCGTATGTAGTCACTTGTTGAAATCTCTAGAAAGACAAGTATTTAGGA
ACGGAGGGTG-TACATGTGAAGCGTACAATGAGTAAATGAGTTATGTA---TATA-------------------------
----------------TAGTAGTAATGTTCTTATTTCTATGATCAGAATTTTGTTTATACAAGAATATCCTATGGTTTGT
----ATCGATAGTTCAATCAACAAAAACACATAAATACACGCATCGTGCTATCGCCCATATATCCATCAGGGGACTGAAA
AAATTTCCTCTGCCAATCGATTCTTCCTCCCG-------AACAGTCAAATGTCAATCCAACGGTTGCATAGAGGTGCACT
GTTTATTTTTGTCTTCCCACACGCTCTTTCTTCATCTCAGGACATGGC--------------------------------
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>chr4D_674
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------------------------------------GTACGATTACCGTACAT---------------------------
------ACTTCAACTTAGAAAACAGTT-----------------------------------------------------
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-------------------------------------------------------------TGCGCTCAGACACACCTAA
ACGCGTCGACTGTATG----------TAC------CATGGTTCGCTGTGATCCCCTGTCAGACTCGGCTGCGAACAATAG
------TCCTACGTAGAAACTCTTTCCGTCTCGGCTTTGCGCGCCCGTTCGGGACACTCATACCTCTCTATATAGATATA
GTATCTTGTAC--------GTACATCACCACCTGAGTAAATCG--CAAT--TATCTGTGGAAATCACGGCGCGAACGACT
CATCGTCGTTTTAGATTAGA-----CATCGATCGAGAACGAAGTACCTCGCGCTGTGTACGACG--TGCATGGCAGCCCT
CAACACGATCCACGAGCACAATGAGCGTGACCTCGAGGCAGGGCACGCTACGCCGCTGTCATCGCTCGTCACGGGCAAGG
CC------------------CGTCGCCGCAACAGCTGCCGCCGGTTCGCCTGCGTCGCCCTTGTCGTCGTGGCAGCCCTC
GCCGTCGCCCTC---G---CCGTCCTCGGGGCTCTCTACGTGGCGCTCGACCCGAAGATGCCCCTTTACACGGTGCACGC
GCTCAACGTGACGGCCTTCGGCATGGACGACGACATGACCGCGCGTGCGCGGTTCGACGCGGCGGTCCGGTTCGAGAACC
CGAACCGGGCCATCGGCATCTCGTACGAGGAGGGGTCCAGCCTCGCGGTGTGGTACGGTGGGTACCGGCTGTCCGAGGGA
GCGCTGCCGGCGTTCTACCAGGGCCACCGCGACGCCGCGGTTGTGCACGTCGCCATGAGCGAGGCGCGGCTGGGTGGCAC
AGGGGTGGTGGAGGCCATGAGGCACGTGAACGGGGCTGGCGGCGAGCTGCCGCTGGTGTTCCGCGGCGAGGTGCCCGTGC
GGGTGAAGGTCGGGCCGGTGACGACCGGCAAGGTGACGCCCCGTGTCCGGTGCGACCTGGTGCTGGACAGGCTGAG----
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-------------------------------------------------------CACCGAGGGCGGGATCGGGGTCAAG
AGGATGAACTGCAACTTGAAGCTATGGTAATCCGG----GGCTTTGCCGTT----------------AAACGACACACTA
GTAC----------------------------------------------------------------------------
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--------TG-TACATGTGAAGCGTACAATGAGT--------TATGTA---TATAGTA----------------------
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>chr4B_851
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-----------------------------------------------------ACACTCATACCTCTCTATATAGATACA
GTATCTTGTAC--------GTACATCATCAGCTAACTAAATCCCTCAAT--TATCTGTGGAAATCACGGCGGGACCGACT
CATCGTCGTT-----TCAGA-----CATCAATCGAGAACGAAGAACCGCGCGCTGTGTACGAGGCATGCATGGCAGCTCT
CGACGCGATCCACGAGCACAATGAGCGTGACCTCGAGGCAGGGCACGCTACGCCACCGTCGTCACTCGTCAAGGAAAAGG
CC------------------CGTCGGCGCAACAGCTGCCACCGGTTCGCCTGGGTCGCCCTTCTCGTCACGGCAGCCGTC
ACCATCGCCCTCGGGG---CCTTCCTTGGGGCTCTCTACGTGGCGCTCGACCCGAAGATGCCCCTTTACACGGTGCACGC
GCTCAACGTGACAGCCTTCGGCATGGACAACGACATGACCGCGCGTGCGCGGTTCGACGCGGCGGTCCGGTTCGAGAACC
CGAACCGCGCCATCGGCATCTCGTACGAGGAGGGGTCCAGCCTCGCGGTGTGGTACGGCGGGTACCGGCTGTCCGAGGGT
GCGCTGCCGGCGTTCTACCGGGGTCCAGCCT----CGCGGTGTGGCACGTCGCCATGAGCGAGGCGCGGCTGGGTGGCAC
GGGGGTGGTGGAGGCCATGCGGCACGTGAACGGGGCCGGCGGCGAGCTGCCGCTGGTGTTCCAAGGCGAGGTGCCGGTGC
GGGTGAAGGTCGGGCCGGTGACGACCGCCAAGGTGACGCCCCGTGTCCGGTGCGACCTGGTGCTGGACAGGCTGAG----
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-------------------------------------------------------CACCGAGGGCGGGATCGGGGTCAAG
AGGATGAGCTGCAACTTGAAGTTATGGTGATCCGG----GGCTTTGCCGTTTGATGGTTCAACTCCCAAACGATACACTA
GTAC----------------------------------------------------------------------------
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--------TG-TGCATGTGAAGCGTACAATGAGT--------TATGTACTGTATA-------------------------
----------------TAGTAGTA--------------------------------------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSS-----S------------------------------------------S----S------
-----S--------------S----------------------------S-----S-------S----------S-----
-------S------------------S----SS---S------------S------S------S----------------
---------S-SS-------S----------------------------------------------S------------
------S------------------S-SSS-SSSSSSSSSSS-SS-SSS-SS--SSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSS--SS-S-----S----------S------------------------------------------------
--------------S-----------------------------------------------------------------
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-------------------S-S----------------------------------------------------------
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-----------------------------------S----S---------------------------------------
-S-----------S------------------------------------------------------------------
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-------------------S------------------------------------------------------------
---------------------------------------------S----------------------------------
---------S----------------------------------------------------------------------
-----------S--------------------------------------------------------------------
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-------------------------------------------------------------------S------S-----
-------------------------------------S------------------------------------------
S-------------------------------------------------------------------------------
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-----------SS-------------------------------------------------------------------
-------S---------------------------------------------------------------S--------
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---------------------------------S----------------------------S-------S---------
-------------------------------------------------------------------S----------S-
---S---SS-----S------------S-----S-S------S----S-S--S--SS--------------------SS-
--S----S------SS-S--------------S-------------------S----------S-S--------S-----
S-----S----S--SS-S-------------------S------------------------S-SS--------------
--S------SSS-----S------S----SS----S-------------S--------------S---------------
---------SS----------S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSS--S----S------------S----S---S---SSSSS-------------------------------------
-------------S-------SSS---------------S-----S------S-S--------S----------S---S-
------S-------S---S-----S--S-----------------S-S-SS----------------------------S
------
>forward_568
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--------------------------------------------------------------------GTACGCGCACAC
CTATGAGA------------------------------------------------------------------------
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>reverse_6243
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--ATGCTTGATCCACGGTCTCC----------------------------------------------------------
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