>input_sequence_71900
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----------------------------------------------------------------------------AGCC
CCACGCCCGCAGATCAGTACACTACACTGGT----------AGCGGCAGCGGTAACTGAAGCGGGAGGATGAACGGCTAC
CGCAACCTGGCCTCGTCCCCTCCGGCGCCCAGCGGCGGGGAGCCGGAGCCGGAGCCGGCCCCGCCCCCGGCCGCGGCGAA
GGAGGGCAAGTGGGAGGGCGCGGCGGTCGGCGCGGCGGCCATGGCCAGGAACCTCTCGTCCGCCTCCCAGAGGTTCGCGG
CCGTGGAGCGGAGCAAGTCCACCGGCGGCCACCGCGGCGGCGGCGGCTTCCAGGCGGCCGTGAGGCGGGCCTTCTCCATG
CGGAGGCAGCCGGCGTCCGGCCTCTCGGAGGGGTACTGGCGGATCCACGACGGCCTGGACGACGCCGAGGACGAGGCAGA
GGCGCCCGAGGAGGTCGACGCGCAGAAGAAGACTCAGGTGGCGGAGGCCGC---------GGTGCCGGGAGACGCCGCGG
CGAGCAACGACGAGATCGGCCAGGAGGAGACGAAGAAGAAGAAGAAGAAGAGGGGCCACATCTTCAAGGCGTGCAAGAAG
CTTCTTGGGTTCAAACATGTCTAGTCTAGTCTAGTC-----AACAGGAAGCTTCTTGGATTCAAGATCCATGGACGCTCT
TGATGCGCCTCCGTTTTGGATCTTGTTCTTGTCTCGTTCGTCGTCGTTTGGAGTAAATAAA-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------
>chr3A_1_TraesCS3A01G388500
GTACCAAAATATTGCAGAGCCAGTTGTTGAGTCTGTTCAGCCAAAATCGGTATTTTTATGGTGCCGAACGGTATACCGAG
TCACTGGATATGGTGAGTGTGCCGCGGTTATCGTTGAGTCTCGAATTATGCAGAACATGTCGTGTCCACTAGAGAACGAA
AATGCTTCACACACGACAGTGTTTGGACGATAACTGCACGATCGAGGGATCCAGCGGCCGCTGCTGGGCTGTGCTCGACA
TTCTTCGGCTGGATTTAACCGTCGTGCACAAGTCGTCCAAACTTTATCGTCCCCATAGCACTGCTCACTAGAGAAAGTTC
TATCTGTATTTTCTGATGCAAAACTACCAGGATAGTGAGTCCGTTGAACTTGATCTTTAGCCGCGCGCCACAGGGGAGCG
AGTGCACGCTCGTTCACTGTTAGAGCGCCTGAATTCATGCCAGATAAGAGGGTGATATAGTAGTTTGGGTTGGTGACACG
TCATGTCAAGGCGACAAAGAATCCATATGCACTGGATTGTAGCGCAGCAATTCCCGTGGATACGAACTGGCGTCACGATG
GCCCTGTTTGGATACTCTAACACAGTTAGAGTTAGAGTTATTTTCTAACCCACTCTAACCCAAGTAAGCACCTCTCCATC
GGGATAGTTGGGTTAGATAGAACTAACCCACTCTAACCCTTTCTGTTTGGATACTTTTGGGTTATTTGAGCCTCCAACTA
ACCCAAACTAGCTCTAACCCCATGATCCAAACAGGGCCGATACCGCGTGGCCGGAGCCCTGACGTGGCGGTCAAATTGGA
CGCTCCCGCGGGGCCCCAA-----------------------ACCCAACCCAACACACCACTGCGACAA-----GGCCGG
CGCGGCTGATCTCACACTCACAGCACTACGCCCTCCGCTCTCATTCTCCACTGCCGC--------TGCTGACGAGTGACG
AGCACCGCGCACGCGCCGCATCCACTCCACCGCGCGCGCGAGTACAAATCCCGGACCCGAGAACCTCCTCGCCACCAGCC
CCACGCCCGCAGATCAGTACACTACACTGGT----------AGCGGCAGCGGTAACTGAAGCGGGAGGATGAACGGCTAC
CGCAACCTGGCCTCGTCCCCTCCGGCGCCCAGCGGCGGGGAGCCGGAGCCGGAGCCGGCCCCGCCCCCGGCCGCGGCGAA
GGAGGGCAAGTGGGAGGGCGCGGCGGTCGGCGCGGCGGCCATGGCCAGGAACCTCTCGTCCGCCTCCCAGAGGTTCGCGG
CCGTGGAGCGGAGCAAGTCCACCGGCGGCCACCGCGGCGGCGGCGGCTTCCAGGCGGCCGTGAGGCGGGCCTTCTCCATG
CGGAGGCAGCCGGCGTCCGGCCTCTCGGAGGGGTACTGGCGGATCCACGACGGCCTGGACGACGCCGAGGACGAGGCAGA
GGCGCCCGAGGAGGTCGACGCGCAGAAGAAGACTCAGGTGGCGGAGGCCGC---------GGTGCCGGGAGACGCCGCGG
CGAGCAACGACGAGATCGGCCAGGAGGAGACGAAGAAGAAGAAGAAGAAGAGGGGCCACATCTTCAAGGCGTGCAAGAAG
CTTCTTGGGTTCAAACATGTCTAGTC-----TAGTCTAGTCAACAGGAAGCTTCTTGGATTCAAGATCCATGGACGCTCT
TGATGCGCCTCCGTTTTGGATCTTGTTCTTGTCTCGTTCGTCGTCGTTTGGAGTAAATAAAGAGCTT-GGGTTCGTTGAC
TTGAACATGGGATTGCCGTGCTGTATTTCTGCGTCACGTGAGTGAGCTCGGCCATTGAATGTGGCCCTGACAATGGGACT
TTGGGGGCATGTACGCGGTTCGGCGGATGATGCGTGGCAACGCAGTCAAAGGGGCGGGCACCTTGTCCGGCCGCAAAGCC
GTGCGCCAGATATTTGTGGCCATGGATCGGGTGCGCACTTTGTGAGGTCTTCGTCCTACTAAATGAAATTAGGCCAATAC
CACCGCACAACTTCAAACGAATGTCTGT-TTTAGCCAAATTTTATCCCTTTAAGACGGTAATGGGTTCGTCCATATCCGT
TTCTGTCCGTTGGATCGTGGGTGTGTCCAGCGCGCGGCCGCACCCCAAATCATGTTCGTGTTGGACGTGAT-AAAAAAAC
A-GAAAAACTAAAATAAAATGAC-T-TAAAAAGTAAATAAACGCAGTTAAAAAAACGTACAACATGAGTTA-GG-GGTCA
CGGTCACAAAACGACA-AGTTTCACGGTTCACTTAATGGCCCAGTGCCATAATTAACAT---AAAAACAAAATAAAAAA-
--CATCGCCCACGCGCTCCTGCCGTGCCCGTCGATGCCGTCGTCGTCGCCGTCTTCAGTGGCCGTCGGTGTCGTCATCGT
TGCTGACGAGGTCGACGTACTCCGGCGGCGTCCT-------------------TGGTGCGCC---GGGGC---GGGCTGG
AAGGTGGCAGTTGCCTGCACCACCTCCTCCTGTGGCGACGCGTCCCCCTCCGGTGACCGCGGCGGCGTG---CACCAGTT
CACGCCCCC-CACGGCCTGC--------------------------------------GCCCAGCAGGCCCGGGTGAAAC
GCGGCCACTAACGCACCCTCCATTACCTCCTCCGCCGCCAGCATCTCCAGCTCGGGGATAGCGACGTCGCCGGCCACGGA
GAGGGCCATCATCTCCTCGAGGCCCTCCCATTGGCACTCATCGTGCGTGCGCATGGAGTCCTCCATGACACGCGCCATGA
GACGGGCCTCCTCCTCCGCTGTC
>chr3D_348
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------CAGGATAGTGAATCGGTTGAGCTTAATCTTTTGCCACGAG-CACCAGGAAGCG
AGTGCATGCTCGTTCACTGTTGGAGCGCCTGAATTCATGCCAGATAAGAGGGTGATGGTTT------GGTTGGTGACACG
TCATGTCAAGGCGACAAAGAATCCATATGCACTAGATTGTAGCGCAGCAATTCCCCTGGATACGAATTGGCGTCA-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------CGAAACCCCGTGGCCGGAGCCC--ACGCGGCGGTCAAATTGGA
CGCTCCCGCGGGGCCCCAACCCACCGAAACGGCTCGCCCCAAACCCAACCCAACACAGCACCGCGACAA-----GGCCGG
CGGGGCTGATCTCACACTCACAGCACTACGCCCTCCGTTCTCATTCTCCACTGCCGCGGTGCTGCTGCTGACGAGTGACG
AGCACCGCGCACGCGCCGCATCCACTCCACCGCGCACGCGAGTACAAATCCCGGACCTGAGAACCTCCTCGCCACAAGCC
CCACGCCCGCAGATCAGTACACTCGTAGCGGCAGCGGCAGCAGCAGCAGCGGAAACTGAAGCGGGAGGATGAACGGGTAC
CGCAACCTCGCCTCGTCCCCTCCGGCGCCCAGCGGCGGCGG---GGAGCCGCAGCCAGCCCCGTCCCCGGCCGCGGCGAA
GGAGGGCAAGTGGGAGGGGGCGGCGGTCGGCGCGGCGGCCATCGTCAGGAACCTCTCGTCCTCCTCCCAGAGGTTCGCGT
CCGTGGAGCGGAGCAAGTCCACCGGCGCCCACCGCGGCGGCGGC---TTCCAGGCGGCCGTGAGGAGGGCCTTCTCCATG
CGGAGGCAGCCGGCGTCCGGCCTCTCGGAGGGGTACTGGCGGATCCACGACGGCCTGGACGACGGCGACGACGACGCCGA
GGCGCCCGAGGAGGTCGACGGGCAGAAGAAGCATCAGGTGGCGGAGGCCGC---------GGTGCCGGGAGACGCCGCGG
CGAGCAACGACGAGATCGGCAAGGAGAC---------GAAGAAGAAGAAGAGGGGTCACATCTTCAAGGCGTGCAAGAAG
CTTCTTGGGTTCAAACATGTCTAGTC-----TAGTC-----AACAAGAAGCTTCTTGGATTCAAGATCCATGGACGTTCT
TGATGTGCCTCTGTTTTGGATCTTGTTCTTGTCTCGTTCGTCGT---TTTGAGTAAATAAAGAGCTT-GGGTTCGTTGAC
TTGAACATGGGACTGCGTTGCTGTATTTCTGCGTCACGTGAG----CTCGGCCATTAAATGTGGTCCTGACATTGGGACT
TTGGGGGCATGTACGCGGTCCT-------------------GCAGTCAAAGGGAAGGGCACCTTGTCCGGCCGCAAAGCC
GTGCGCCGGATATTTGTGGCCATGGATCCGCTGCGCACTTCGTGAGGTCTTCGTCCTA---GATGAAATTAG--------
--------------------------------------------------------------------------------
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-----------------------
>chr3B_394
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------------------GGGAGAG
AGTGCACGCTCGTTCA-------AGCGCCTGAATTCATGCCAGATAAGAGGGTGACAGTTT------GGTTGGTAACACG
TCATGTCAAGGCGACAAAGAATCCATATGCACTGGATTGTAGCGTAGCAATTCCCGTGGATGCGAATTGGCGTCA-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------CGAAACCCCGTGGCCGGAGCCCTGACGTGGTGGTCAAATTGGA
CGCTCCCGCGGGGCCCCAA--------------TCGCCCCAAACCCAACCCAACACAACACCGCGACAACACAAGGCCGG
AGCGGCTGATCTCACACTCACAGCACTACTTCCTCCGTTCTCATTCTCCACTGCCGCAGTGCCGCTGCTGACGAGTGACG
AGCACCGCGCACGCGCCGCATCCACTCCACCTCGCACGCGAGTACAAATCCCAGACCTGAGAACCTCCTCGCCACCAGCC
CCACGCCCGCAGATCAGTACACTCGTAGC------------AGCAGCGGCGGTAACTGAAGCGGGAGGATGAACGGCTAC
CGCAACCTCGCCTCGTCCCCTCCGGCGCCCAGCGGCGGGGAGCCGGAGC------CAGCCCGGCCCCCGGCGACGGCGAA
GGAGGGCAAGTGGGAGGGGGCGGCGGTCGGCGCGGCGGCCATGGTCAGGAACCTCTCGTCCGCCTCCCAGAGGTTCGCGG
CCGTGGAGCGGAGCAAGTCCACCGGCGGCCACCGCGGCGGCGGC---TTCCAGGCGGTCGTGAGGCGGGCCTTCTCCATG
CGGAGGCAGCCGGCGTCCAGCCTCTCGGAGGGGTACTGGCGGATCCACGACGGCCTGGAAGACGGCGACGACGACGCCGA
GGCGCCCGAGGAGGTCGACGAGCAGAAGAAGCATCAGGTGGCGGAGGCCGTAGAGCCGGAGGTGCAGGGAGACGCCGCGG
CGAGCAGCGACGAGATCGGCAAGGAGAG---------GAAGAAGAAGAAGCGGGGTCACATCTTCAAGGCGTGCAAGAAG
CTTCTTGGCTTCAAACATGTTTAGTC-----TAGTC-----AACAAGAAGCTTCTTGGATTCAAGATCCATGGACGCTCT
TGATGTGCTTCTGTTTTGGATCTTGTTCTTGTCTCGTTCGTCGT---TTTGAGTAAATAAAGAGCTTTGGTTTCGTTGAC
TTGAACATGGGACTACGTTGCTGTATTTCTGCGTCACGTGAG----CTCGGCCATTGAATGTGGTCCTGACAATGGGACT
TTGGGGGCATGTACGCGGTCCT-------------------GCAGTCAAAGGGAAGGGCACCTTGTCCGGCCGCAAAGCC
GTGCGCCAGATATTTGTGGCCATGGATCCGCTGCGCACTTTGTGAGGTCTTGGTCC--CTAGATGAAATT----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------------------
>chr7A_1927
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------ATAAGGCCAACTT
CACCCCACGACCCCAAACGGACGTCCGG-TTTGGCCGGATTTTGTTCCTTTGGGGCGGCAATGAGTTCGGCCATGTCCGC
CTCTCTCCGTTGGGTCGTGGATGCGCCCAGCGCGCGGCCACAAACCAAATCATGTCCGTGTTGGACGTGAT-AAAAAA-T
A-GAAAAACTAAAATAAAATGAC-T-TAGAAAGTAAATAAACGCAGTTAAAAAAACTTAAAACATAAGTTAAGG-GGTCA
TGGCCACAAAACGGCCCAGTTTCACGGTTCACTTAATGGCCCAGTGCCATAATTATCAT---AAAAACAAAATAAAAAA-
--CACCGCCCGCACGCTCCTGCCGCGCCCGTCGATGCCGTGGTCGTGGCCGTCTTCAGTGGCCGCCGGTGTCGTCGTCGT
CGCTGACGAGGTCGACGTAGTCTGGCAGCGTCCAGAGGTGGGCCGGCAGTCCGTGGTGCACGGGGGCGGC---GGGCTGG
AAGGTGGCAGGTGCCTGCACCACCTCCTCCCATGGCGAGGCGTCCCTCTCCGGTGACCGCGGCGGCGTGGGGCACCAGTT
CACGCCCCC-CTACG-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------
>chr3A_1928
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------TTAGGCCAACTC
CACCGCAAGACCTCAAATGGACGTCTGG-TTTGACCTGATTTTGTCCCTTTGGGGTGGCAATGGATTCGCTCATGTCCGC
TCATGTCCGTTGGGTCGTGCGTGCGCCCACCGCGCGGCCGCACCGCAAATCATGTCCGTGTTGGACGTGATTAAGAAAAC
A-GAAAA-CTTAAATAAAATGACTT-AAAAAGGTAAATAAACGCAGTTAAAAAACATAAAACAT-AGTT--AGA-GGTCA
CGGCCACAAAACGGCCCAGTTTCACGGTTCACTGAACGGCCCACTGCCATAATTAACAT---AAAAACAAAGCAAAAAAA
AATGACGCCCGCGCGCTCCTGACGTG---------GCCGTCGCCGTTGCCGTCTTCAATGGCCGCCGGTGTCATCGTCGT
CGCAGACGAGGTCCACGTACTCCGGCGGCGTCCAGAGGTGGGCCGACGGTCCGTGGTATGCG---GGG-CGG---GCTGG
AA---GGCGGGGGCCTGCACCACCTCCTCCCGTGGCTACGCGTCCCCCTCCGGTGACCGCGGCGGCGTGGGGCGCCAGTT
CACGCCCCC-CACGGC----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------
>chr7D_1928
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------TTAGGCCAACTC
CACCGCACGACCCCAAACGGACGTCTGG-TTTGGCCGGATTATGTCCCTTTGGGGCGGCAATGGGTTCGCCCATGTCCGC
CTCTGTCCGTTGGGTCGTGGGTGCGCCCAGCGCGCGGCCGCACCCCAAATCATGTCCGTGTTGGGGGTGAT--AAAAAAC
A-GAAAAACTAAAATAAAATGAC-T-TAAAAAGTAAATAAACGCAGTTAAAAAAACTTGAAACATAAGTTA-TG-GGTCA
CGGCCACAAAACGGCCCAGTTTCACGGTTCACTTAACGGCCCAGTGCCATAATTAACAT---AAAAACAAAATAAAAAA-
--CGCCGCCCGCGCGCTCTTGCTGCGCCCGTCGATGCCGTGGCCGCCGTCGTCTTCAGTGGCCGCCGGTGTCGTCATCGT
CGCTGACGAGGTCGACGTAGTCTGGCGGCGTCCAGAGGTGGGCCGGCGGTCCGTGGTGCGCC---GGGGC---GGGCTGG
AAGGTGGCAGGTGCCTGCACCACCTCCTCCCGTGGCGACGCGTCCCGCTCTGGTGACTGCGGCGGCGTGGGGCACCAGTT
CACGCCCCCGCACGGCGTGCGCC---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------
>chr2D_1928
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------TTAGGCCAACTC
CACCGCACGACCCCAAACGGACGTCCGG-TTTGGCCGGATTTTGTCCCTTTGGGGCGGCAATGGGTTCGCCCATGTCCGC
CTCTGCCCGTTGGGTCGTGGGTGCGTCCAGCGCGCGGCCGCACCCCAAATCATGTCTGTGTTGGACGTGATAAAAAAACA
A-AAAAA-CTAAAATAAAATGAC-T-AAAAAAGTAAATAAACGCAGTTAAAAAAATTAAAATATAAGTT--AGG-GGTCA
TGGCCACAAAACAGCCCAGTTTCACGGTTCACTTAACGGCCCAGTGTCATAATTAACAT---AAAAACAAAATGAAAAA-
--CACCGCCCGCGCGCTCCTGCCGCGCCCGTCGTTGCCGTGGTCGTCGCCGTCTTCAGTGGCCGCCAGTGTTGTCGTTGT
CGCTGACGAGGTCGGCGTAGTCCGGCGGCGTCCAGAGGTGGGCCGGCGGTCCGTGGTGCGCC---GGGGC---AGGCTGG
AAGGTGGCAGGTGCCTGCACCACCTCCTCCCGTGGCGATGCGTCCCGCTCCGGTGACCACGGCGGCGTGGGGCACCAGTT
CAAGCCCCC-CACGGCGTCGGCCATCTGCTCTGCCGTGCACGACCAGGTCCACTCCTGGCCCACCAGGCCCGGGTGGAAC
GAGGCCACCGGCGCCTCCTTCATCACCTCCTCCGCCGCCACCATCTCCAGCTTGGGGATGGCGACGTCGCCGGCCATGGA
GAGGGCCGTCATCTCCTCGAGGCCCTCCCATTGGCGCTCATCGTGCATGCGCATGGAGTCCTCCATGACACGCGCCATGA
GACGGGCCTCCTCCTCCGCTGTC
>chr7B_1928
--------------------------------------------------------------------------------
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--------------------------------------------------------------------TTAGGCCAACTC
CACCGTACGACCCCAAATGGACGTCCGG-TTTGACCGGATTTTGTCCCTTTGGGGCGGCCATGGATTCGCCCATGTCCGC
TTTTGTCCGTTGGGTCGTGCGTGCACCCACCGCGTGGCCGCACCCCAAATCATGTCCATGTTGGACGTGATTAAAAAAAC
A-GAAAAACTTAAATAAAATGAC-TAAAAAAAGTAAATAAACGCAGTTAAAAAACATAAAACATTACTT--AGG-GATCA
CGGTCACAAAACGGTCCAGTTTCACCGTTCACTTAACGGCCCAGTGCCATAATTAACAT---AAAAACAAAATAAAAAA-
--CGCCACCCGCGCGCTCCTGCCGTGCCCGTCGATGCCGTGTCCGTCGCCGTCTTCAGTGGCCGCCGGTGTCGTCGTCAT
CGCTGACGAGGTCGACTTAGGCCGGCGGCGTCTAGAGATGGGCCGGCGGTTCATGGTGCGCG---GGGGC---GGGCTGG
AAGGTGGTAGGTGCATGCACCACCTCCTCCCATGGTGAGGCGTCCTGCTCCGGAGACCGTGGCGGTGTGGGGCACCAGTT
CACGCCCCC--ACTGCGTGCGCC---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------
>chr4D_1928
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------TTATGCCAACTC
CACCGCACGACTTCAAACGGACGTCTGG-TTTGGCCGGATTTTATCCCTTTGAGGTGGTAATGGGTTCGTCCATGTCCGC
GTCTGTCCGTTGGGTCGTGGGTGCGCCCAACGCGCGGCCGCATCCCGAATCTTGTCCGTGTTGGACGTGATTAAAAATAA
A-TAAAAATTTAAACAAAATGAC-T-TAAAAAGTAAATAAACTCAATTAAAAAAACTTAAAACTTAAGTTA--G-GGTCA
TGGGCACAAAACGACCCAGTTTCACGGTTCGCTTAACGTCCCAGTGCCATTAATTAAACATAAAAAACAAAATAAAAACG
GCTGCCGCCCGCGCGCTCCTGCCGTGCCCGTTGATGCCGTCGCCGTC----------GTGGCCACCAGTGTCGTCGTCGT
CGACGACGAGGTCGACGTAGGTCGGCGGCGTCCAGAGGTGGGCCGACGGTGTGTGGTAGACG---GGGGC---GGGCTGG
ACGGCGGGAGGTGCCTGCACCACCTCCTCCTGTGGCGACGCCTCCCGCTCCGGTGACCGCGGCGGAGTGACGCACCAGTT
CACGCCC-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------
>chr2D_1930
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------AGGCTAACTC
CACCGCACGACCTCAAACGGACGTCCGGTTTTGGCCGGATTTTGTCCCTTTGGGGCGGCAATGGGTTCGTCCATGTCCGC
CTCTGTCCGTTGAGTTGTGGGTGTGCCCAGCGCGCGGCCGCACCCCAAATCATGTCCGTGTTGGATGTGATAAAAAAC--
---AAAAAATAAAATAAAATGAC-TTAAAAAAGTAAATAAACACAGTTAAAAAAACTTAAAACATAAGTTAAGG-GGTCA
TGGCCACAAAACGGCCCAGTTTCACGGTTCACTTAACGGCCCAGTGCCATAATTAACAT---AAAAACAAAATAAAAAA-
--CGCCGCCCGCGCGCTCCTGCCGCGCC-GTCGATGTCGTGGCCAT-GCTGTCTTCAGTGGCCGCCGGTGTCGTCGTCGT
TGCTGACGAGGTCGATGTAGTCCGGCGGCGTCCAGAGGTGGGCCGGCAGTCCGTGGTGCACGGGGGCGGC---GGGCTGG
AAGGTGGCAGGTGCCTGCACCACCACCTCCCGTGGCGAGGCGTCCCGCTCCGGTGACCGCGGCGGCGTGGTGCACCAGTT
CACGCCCCC-CACGGC----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------
>chr6D_1930
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------AGGCCAACTC
CACCGCACGACCCCAAATGGATGTCCGGTTTGG--CGGGTTTTGTCCCTTTGGGGCGGCAATGGGTTCGCCCATGTCCGC
CTCTGTCCGTTGGGTCGTGGGTGCGCCCAGCGCGCGGCCGCACCCCAAATCATGTCCGTGTTGGACGTGAAAAAACTC-C
A-GAAAAACTAAAATAAAATGAC-TTAAAAAAGTAAATAAACGCAGTTAAAAAAACTTAAAACGTAAGTTA--GGGGTCA
TGGCCACAAAACGGCCCAGTTTCACGGTTCACTTAACGG-CCAGTGCCATAATTAACAT---AAAAACAAAATAAAAAA-
--CGCCGCCCGCGCGCTCCTGCCGCGCCCGTCAATGCCATGGCCGTCGCCGTCTTCAGTGGCCGCCGGTGTCGTCGTCGT
CGCTGACGAGGTCGACGTAGTTCGGCGGTATCCAGAGGTGGGCCGGCGGTCCGTGGTGCGCC---GGGGC---AGGTTGG
AAGGTGGCAGGTGCTTGCACCACCTCCTCCCGTGGCGACGTGTCCCGCTCCGGTGACCGCGGCGGCATGGGGCACCAGTT
CACGCCCCC-CACGGCGTGCGCCATCTCCGGAGCCATGCATGACCAGCTGCACTGCTGGCCCAGCAGGCCCGGGTGGAAC
GCGTCCACCGGTGCCTCCTCCATCACCTCCTTCGCCGCCACCATCTCCAGCTCGGGGATGGTGACGTCGCCGACCGCGGA
GAGGGCCATCATCTCCTCGAGGCCCTCCCATTGGCGCTCATCGTGCGTGCGCATGGAGTCCTCCATGACACACGCCATGA
GACGGGCCTCCTCCTTCGCTGTC
>chr2B_1930
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------AGGCCAACTC
CGCCGCACGACCCCAAATGGACGTCTAG-TTTGGCCGAATTTTGTCCCTTTGGGGCGGCAATGGGTTCGCCCATGTCCGC
TTCTGTCCGTTGGCTCGTGGGTGCGCCCAACGCCCGACCGCACCCCAAATCATGTTCGTGTTGGACGTGATTAAAAAA-C
A-AAAAAACTTAAATAAAATGAC-T-AAAAAAGTAAATAAACACAGTTAAAAAACATAAAACATAAGTT--AGG-GGTCA
CGGCCACAAAACGGCCGAGTTTCACGGTTCACTTAACGGCCCAGTGCCATAATTAACAT---AAAAAGAAAAT--AAAA-
AACGCCGCCCGCGCGCTCCTGCCGTCGCCGTCTTCA--GTGGCCATCACCGTCTTCAGTGGCCGTCGGTGTCGTCGTCGT
CGCTGACGAGGTCGACGTAGTCCGGCGGCGTCCAAAGGTGGGTCGGCGGTCCGTGGTACGCA---GGGACGG---GCTGG
AA---GGCGGGGGCCTGCACCACCTCCTCCCTTGGCGACACATCCCCCTCTGGTGACCACGGCGGCGTGGGGCATCAGTT
CACGCCCCC--ACG------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------
>chr1A_1930
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------------------------AGGCCAACTC
CATCGCACGACCCCAAACGGATGTCCGG-TTTGGCCAGATTTCGTCCCTTTTGGGCGGCAATGGGTTCTCCCATGTTCGC
TTCTGTCCGTTGGGTTGTCGGTGCGCCCAAAGCGCGGCCGCACCCCAAATCATGTCCGGGGTGGACGTGATTAAAAAAAC
A-GAAAAACTAAAATGAAATG-C-TGAAAAAAGTAAATAAACGCAAATATGAAAACATAAAACATAAATTAACC--ATCA
CATCCACAAAATGGCCCAGTTCCACGGTTCAC----------ATTGCCAAAATTAATAT---------------AAAAA-
AATGCTGCCCGCGTGCTCCTGCCGTGGCCGTCGATGCCGTGGCCGTCACCGTCTTCAGTGGCCGCCGTTATCGTCGTCGC
CGCTGACGAGGTCGACATAGTCTGGCAGCATCCAGAGGTGGGACGGTGGTCCATGGTACACG---GGGGC---GGGCTGG
AAGGCGGGAGGTGCCTGCACCACCTCCTCCTGTGGCGACGCCTCCCGCTCTGGTAACCGCGGCGGCGTGGGG------TT
CACGCCCCC-CAC-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------
>chr1D_1931
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------------------GGCCAACTC
CACCGCACGATCCCAAACGAACGTCCGG-TTTGACCGGATTTTGTCCCTTTGGTGTGGCAATGGGTTCGCCCATGTCCGC
CTCTGTCCGTTGGGTCATGGGTGCGCCCAGCGCGCGGCCGCACCCCAAATCATGTCCGTGTTGGACGTGATAAAAAAA-C
A-GAAAAACTAAAATAAAATGAC-TTCAAAAAGTAAATAAACGCAGTTAAAAAAACTTAAAACTTAATTTAAGG-GGTCA
TGGCCACAAAACGGCCCAGTTCTACGGTTCACTTAACGGCCCAGTAGCATAATTAACAT---AAAAACG----AAAAAA-
AACGCCGCCCGCGCGCTCCTGCCGTGCCCGTCGATGCCGTGGCTGTCGCCGTCTTCAGTGGCCGCCGGTGTTGTCGTCGT
CGCTGACGAGGTCGACGTAGTCCGGCGGCGTCCAGAGGTGGGCCGGCGGTCCGTGGTGCACG---GGGGCGGTGGGCTGG
AAGGTGGCAGGTGCGTGCACCACCTCCTCCCGTGGCGAGGCGCCCCGCTCCGGTGACCGCAGCGGCGTGGGGCACCAGTT
CACGCCCCC-CACGGC----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------
>chr3D_1953
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------CAAACGGACGTCCGG-TTTGGCCGGATTTTGTCCCTTTGGGGCGGCAATGGGTTCGCCCATGTCCGC
ATCTGTCCGTTGGGTCGTGGGTGTGCCCAGCGCGCGGCCGCACCCCAAATCTTGTCCGTGTTGGACGTGATTAGAAAA-C
ATAAAAACTTAAATAAAATGAC----TTAAAAGTGAATAAATGCAGTTAAAAAAACTTAAAACTTAAGTTA--G-GGTCA
TGGCCACAAAACGGCCCAGTTTCACGGTTCACTTAACGTCCCAGTGCAATAATTAACAT---AAAAACAAAATAAAAATG
GCCGCTGCCCGCGCGCTCCTGCCGTGCCCGTCGATGCCGTCGCCGTCGCCGTCTTCAGTGGCCGCTGGTGTCGTCGTCGT
CGCTGACGAGATCGACGTAGGCCGGCGGCGTCCAGAGGTGGGCCGGCAGTGCATGGTAGAC---GGGGGC---GGGCTGG
ACGGCGGGAGGTGCCTGCACCACCTCCTCCCGTGGCGACGCCTCCCGCTCCGGTGACCGCGGCGGAGTGACGCACCAGTT
CACGCCC-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------
>chr2B_1953
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------CAAATGGACGTCCGG-TTTAGCCGGATTTTGTCCCTTTGGGGCGGCAATGGGTTCGCCCATGTCCGC
TTCTGTTCGTTGGGTCGTGCGTGCGCCCACCGCGCGGACGCACCCCAAATCATGTTCGTGTTGGACGTGATTAAAAAAAC
A-AAAAAATTAAATAAAATGAC----TAAAAAGTAAATAAACGCAGTTAAAAAATATAAAACAGAAGTT--AGG-GGTCA
CGGCCATAAAATGGCCCGGTTTCACGGTTCACTTAACGGCCCGGTGGCATAATTAACAT---AAGAACAAAATAAAAAA-
AACGCCGCCCGCGCACTCTTGTCGTGGCTGTCG---------TCGTCGCCGTCTTCAGTGGCCGCCGGTGTCGTCGTCGT
CGCTGACGAGGTCCACGTACTCCGGTGACGTCCAGAGGTAGGCCAGCGGTCTGTGGTACGCG---GGGGCGG---GCTGG
AA---GGCGGGGGCCTGCACCACCTCCTCCCGTGGCGATGCGTCCCCCTCCGGTGACCGCGGCGGCGTGGGGCAGCAGTT
CACGCCCCC-CACGGC----------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------
>chr1B_2022
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---TGTCCGTTGGGTTGTACGTGCACCCACCGTACGTCCGCACCTTAAATCATGTCCGCGTTGAGCGTGATTAAAAAAAC
A-GAAAAACGTAAATAAAATAAC-AAAAC----------AATGCATTTAAAAAACATAAAACATTAGTT--AGG-GGTCA
CGGCCACAAAACGGCCCAGTTTAACAGTTCACTTAACGGCCCAGTGCCATAACTGAAAT---AAAAA---AAT--AAAA-
AACGCCGCCCGCGCACTCCTGTCGTGCCCGTCGATGCCGTGGCCGTCGCCGCCTTTAGTGGCCGCGGGTGTCGTCGTCGT
CGCTGACGAGGTCGACGTAGGCCGGCGGCATCCAGAGGTGGGACGGCGGCGCGTGGTACACG---GGGGCGG---GATGG
AAGGCCGGAGGTGCCTGCACCACCTGCTTCCGTGGTAAGGCCTTCCGCTCCGGTGACCGTGGCGGCGTGGGGCACCAGTT
CACGCCCCC-CACTGC----------------------------------------TGGCCCACCAGATCTGGATGGAAC
GTGACCATCGGCCCGTCCTCCATCGCCTCCTCCGCGGCCACCATGTCCAGCTCGGGGAGGGCGACGTCGCCAGCCGCAGA
GAGGGCCATCATCTCCTCAAGGCCCTCCCATTGGCGCTCGTTGTGCGTGTGCATGGAGTCCTCCATGACACGCGCCATGA
GCCGGGCCTCCTCCTCCGCTGTC
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSS-----------S--S-----S---S------S---S--S-S---SS-------
---------------------S-----------------------------------SSS-SSSSSS-------------
------------------------------------------------------------------S--------SSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S---S-----------------------------------
---------------------------------------------------------S---S------------------
-------------------------------------S------------------------------------------
-----------------------------------S---------------------S----------------------
-----------------------SSSSSS-S-------------S-----------------------------------
--------S------------------------------------------S----S-----------------------
------------------S-------------------------S-----------------------------------
--------------------------------------------SSS---------------------------------
----------------------------------------------------------------S---S-----S--S--
--------------------S----------SS-----------------------------------------------
--------------------S-----SSSSSSSSSSS------------------S------------------------
------------------------------------SSSSS----S----------------------------------
-----S-----S--------------------------------SSS--S------------------------------
------------S---SS------------------------SSSS------------------S---------------
-------------------S-SSSSSSSSSSSSSSSSSSSS------------SS-------------------------
----------------------------S-S------------------------------S---------------SS-
--------S------------------S-----------------------S--S-------------------S----S
-------------S------------------------------------------------------------------
--------------------------------------------------------S--S-----S--------------
---------------S----------------------------------------------------------------
----S-----S---------------------------------------------------------------------
---------------------------------S----------------------------------------------
----------S---------------------------------------------------------------------
----------------S-----------------------------------------------------------S---
--------SSS---SS-------S----------------S------------------S--------------------
-----------------------------------S--------------------------------------------
-----------------------
>forward_644
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----------------------------------------------------------------TAAGCACCTCTCCATC
GGGA----------------------------------------------------------------------------
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>reverse_1803
--------------------------------------------------------------------------------
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------------------------------------------TGAGCTCGGCCATTGAATGT------------------
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-----------------------
