>input_sequence_71795
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---------CTATAAAAGCCGTCCTTGGGTTCCTTCCGATACACACACAGAGGTTGCAGAACGCGCATAGGTTTAGACAG
AGATCGAG-CAAAAATGAAGAGCACACCCATCATCTGCGTCGTCGCCGTATCTCTCACGGCCATCGCCTTGCTCTCCGGC
AGCACCGACG---CCGCATGCGCCGGCGACCGGTCCATGTCCGTCGCCGGCGCGTGCGACAAGACGAGCGCCTGGCAGGG
CCAGCACGAGCTGGAGCTCTGCCAGAAGACGCTGCGCGGCGCACGGGACGGCCTCACGGCCAGCGCCTACGGCATCATCG
CCGTGAGGGCCGCCCTTCAGTCGTCCGAGGCCACCGAGGGCGCCGGCAAGAAGCTGGCGCAGGACCCGAAACTCCCCGAG
GACGCGCGGGCGGTGTACCAGATCTGCGTGGACATGTACGGCTTGGCGCGCACCGACGTCGTCGCCATGGAAGGCGCGCT
CAAGGCCTGCTCGCTCGCGGACTTCCGGCGGGTATGGGAGGGCGCGCTCGCCTCGGTGGATTACTGCGCGGGGAAGCTGC
GGCTCGTCGACGGCGACGTGCTGCAGCGCACGGTCTCGGCGGACAGGGAGAGGATCTTGCTCGCTTTCATCCTGGGAGGG
CTTTCTTTTCCGAAATGATAGTATGCCTG----GATGTGGAGGTGTGGATTTTGTGTCGGTA------------------
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>chr1B_1_TraesCS1B01G302400
CTGTAGTGAGCATGGTGTAGGTGGTGAGCCGGCGCCTCGACATCGCAAGAGGCGGATGAAAGTAGAAGTGGGGCAGAGAG
GAGAAAAGGGAGAAATGGGGCGGGCTAGGGTTCTACTGCCGCTGTCCGGG----------AGCTCCCTCCCTCGGGCGGC
ACGCCGGAGCGACGCCACGCGGCGCGGAGTAGAGGAGGCGCCCGTCGAACCAGCGGTCTCACCGCATCCTCGTGTGGGCC
CTTTCCGTCAGTCCTACGTGGCGGACGTGCCCGGACGCGTCCGGACCTCCCCATAATCGCCCTAGATATGGGCCGAATAT
GGGAAGTGCCAGCCAGCCCGGGCGTTTGGCCCGGCTATGGGTTACCCGATTGGGTGCCCAAAACTCGCTCGGGCTCTGAC
GGGCAGCCCGCCCATACGTTTAGGATGGGTATGG--------GGAGTCCTGTTATAGATTCTCTTAACACTATAGGATGC
TGAACTTATATACTCAAGTGAGCTAGATAAGATTTAATTCTCATTTAGATGAGAGATAGCCACACCCACAAATTAATGCT
A------------------------------------------CACATTGATACACATTAATGATTTTTATTCATTTTGT
ACCGAATTAGTTTATTTGGGTTTTATTTATTTTTATGTCGTGTGTAACTACACTTGCATGACTGGCCGGCTGTGCTCAAC
AGCATGTCCACATGCCACCCACTGCTGCATTTGCATATTTTCTAAAATAGAAATGCAAAAGGAAAAATCGAGAATAGAGC
GTAAATTGAGAAAAAATATAGAAGTGAAATAAAATGGGAAAGCGGGAAAGAAAAATATATATACGCAAGTGAGCTAGATG
AGATT---------------------------------------------------------------------------
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-------------------------------------------------------TAATTTTCATTTAGATTAGAGA---
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------TACTAGCCACACCCATAAACTAATGCTACACATTGATATTAAGGATTCATTGGCTTCTACTGGTTGCTGCATAA
TGATACACACTAATTGCTCTAGATATGCTGCATGTA-CAATATAT-------TTTCAGTTTGGCTACT--ACTCCTTGGC
AGGGCCGTTCTATAAAAGCCGTCCTTGGGTTCCTTCCGATACACACACAGAGGTTGCAGAACGCGCATAGGTTTAGACAG
AGATCGAG-CAAAAATGAAGAGCACACCCATCATCTGCGTCGTCGCCGTATCTCTCACGGCCATCGCCTTGCTCTCCGGC
AGCACCGACG---CCGCATGCGCCGGCGACCGGTCCATGTCCGTCGCCGGCGCGTGCGACAAGACGAGCGCCTGGCAGGG
CCAGCACGAGCTGGAGCTCTGCCAGAAGACGCTGCGCGGCGCACGGGACGGCCTCACGGCCAGCGCCTACGGCATCATCG
CCGTGAGGGCCGCCCTTCAGTCGTCCGAGGCCACCGAGGGCGCCGGCAAGAAGCTGGCGCAGGACCCGAAACTCCCCGAG
GACGCGCGGGCGGTGTACCAGATCTGCGTGGACATGTACGGCTTGGCGCGCACCGACGTCGTCGCCATGGAAGGCGCGCT
CAAGGCCTGCTCGCTCGCGGACTTCCGGCGGGTATGGGAGGGCGCGCTCGCCTCGGTGGATTACTGCGCGGGGAAGCTGC
GGCTCGTCGACGGCGACGTGCTGCAGCGCACGGTCTCGGCGGACAGGGAGAGGATCTTGCTCGCTTTCATCCTGGGAGGG
CTTTCTTTTCCGAAATGATAGTATGCCTG----GATGTGGAGGTGTGGATTTTGTGTCGGTAATAATTCGGTGGAAACCC
AGTTGATA---------TGCGG-----TCGTATTTGTAGT-------------TGA-TTGATTTGATTTAAAGTTGTTTC
AAAAGAAAAATCC--ACTGGC---AAAATTGATTGAAACATG----TCATCTT-CTGGAATGCTATAGAA---TGTGCTT
CTCACATTTATTTTTGATTCGACTCTGCTCGTATTTTGAACTGAGCTGAGAAAGGCGTTGTCATGGAAAGTTTCTCACGT
GTCATCCCATGTTCCGGGCCAGCGCCATAGTGAGAAATTCACTGAGAGCCGATGGTCAGGGCTACTGAACATGCACTTGT
GATGAGGCACGTCGACCTGGATCTGGATTCATGAATGCCCGATCCGCAGCCAACGAGCCTCTAAACTCA-----------
---CCAAGATCATTCCCCTTTTTCTGGCACCACCCATACATACAGCAACCGTCAGACACAAGGGCCGCTTTTGAGTCTAG
TCCAAAAATGAAGGACATGGTATGGTTCGGAGGGAACGGGATCCTCTAACATCAAGGAGGGAAGTCAATTTTGCCAGTGG
ATTTGCTACAGTACCCTAACTTCCTCCTTCACATTCATACAATTAAGACTAAAATGGCTTGAATTAATTTGCAAATTACA
ATTCTATTTTATAAATTTACAAAAAATACATATAAAAAATTACGGTGCTGTCGGTGTTCTGGAAACGGGGGTACCCAGAC
TTGCCTGCCTGCGGCCTGCGGCGTGGCTCAGGGAGTGGCCCGGTACGGCCCATCTTCATCAACACATACTCAAGACCCTC
GCGAGGGGCCAAGCCTCGCGGGGCGGACGACAGGAGGCTTCTTCGGGCACAGCCTCGTCAGGCTGGCTCGCGAGGAGGCG
GAGAGATCATGGCGGGGTACCTCACGAGATGACCATGACGCAAGCCATGACGACCAAGGCCAGGCAGGCGCCAGGCGGGC
GCTGGCCTGCGTAGAGTCCTTGTTTCCTCTTTGGTGCAAAGGGGGCAAGCACAGGCAGGAGTATCAAGCAAAGGCAA
>chr1B_5
----AGTGAGCATGGTGTAGGTGGTGAGCCGACGCCTCGACATCGCAAGCGGCGGATGAAAGTAGAAGTTGGGCAGAGAG
GAGAAAGGGGAGAAATGGGGCGGGCTAGGGTTCTACTGCCGCTGCCCGGCTTAAATAGTCAGCTCCCTCCCTCGGGCGGT
ACGCGGGAGCGGTGCCACGCGACGCGGAGCAGAGGAGGCGCCTGTCGGACCAGCGGTCCCACCGCGTCCTTGTGTGGGCC
CTATCCGTCAGTCCTACGTGGCGGACGTGCCCGGACACGTCCGGACCTCCCCATAACTGCCCTAGATATGGGCCGAATAT
GGGAAGTGCCAGCCAGCCCGGGTGTTTGGCCCG-CTATGGGTTACCCGGTTGGGTGCCCAAAACTCGTCCGGGCTCTGAC
CGGCAGCCCGTCCATACGTTTAGGACGGGTATGGCCGTATGGGGAGTCCGGTTATAGGTTCTCTTAACATTATTGGATGC
TTAACTTATATACTCAAGTGAGCTAGATGAGATTTAATTGTCATTTAGATCAGAGACAGCCACACACATAAACTAATGCT
ACACATTGATTTTAAGGATTTATTGGGCTATATAGGTTTACTGCATAATGATACACACTAATAATTTTT-TTCATTTTAT
ACTGAATTAGTTTATTTGGGTTTTATTTATTTTTATGTCCTGTGTAACTACACCTGCATGACTGGCCGGCTGTGCTCAAC
AGTATGTCCACATGCCACCCACTACTACATT---ATATTTTCTAAAATAGAAATGCAAAAGGAAAAATCGAGAATAGAAC
GTAAAATGAGAACAAATATAAAAGTGAAATAAAATGGGAAAGGGGGAAAGAAAAATATATACTCAAGTGCGCATGTGCGC
GCGCGCCTGTGTGTGTCTCATCACTCCTCGGGGCCAACTCCTCCTATTCATCGCATCTCTCCCTGACTCGGTCTCCTCCA
CAAGCTGTAGCACCACCCCACGCCATGGACGCCCTTGCCGGCTGCATCTCCACCAGCACCGCAATGGGCGTG--------
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----------------------GCTCTATAGGTTGCTGCATAATGATACACATTAATGATTTTTGTTTTCTTTTTTTTCC
TTTTCTACTGAATTATTTTATCTGGGTTCTATATTTTTCTCAGGTCACGGGCAACTACACTTGCACGAATGCCCGCTGTG
CGCAACAGTATGTCCACAAGCCGTCCACAACTGCATTTGCATTT--TTTTTAAATAGAAATGCAATAGAAAAGGTCGAAA
ATAAAATGTAAGATGAGAAAA---ATATAAAAGTGGAAGAAAATGGAAAGGAGGAAAGAAAAA-----TATA--CTCATG
TGAACTAGATGAGGTTTAATTCTCATTTAGATCAGAGATATCCACACCTATAAACTAATACTACACATTGATTTTAAGGA
TTTATTGAGCTCTATAGGTTGCTGCAAAATGATACTCCCTCCGTTCCATACTGTAGTGCCTATAGATTTTTGCAAAAGTC
AAACATTACAAACTTTGACCATATTTATAAAGAAAAGCAGGTACATCTAGAATACCAAATGCACATCATTGTATACATGA
TGAATTATATTTTCAAAATGTACATGTTTGGTATTGTAGATGTAGACAGTTTTCTTTATATACTTGGTCAAAGTTGGCAA
AGTTTGACTTTCACAAAAATCTATAGGCATTATTTTGTATACATTAATGATTTTCCCTTTTTACTGATATCTGGGTTCTA
TTTATTGTTTTTCACCCCGGGGCTTAACTATGCTTGCATGACTGCCCAGCTGTGTGCAAAAATATGTCCATATGCCATCC
ACTACTGCATTTGGAGATTTTCTAAAATAAAAATGCAATAAAAAAGTCAAGAACAATGCGTAAAATGAGAAACATATAGA
ACTGAAATAAAATGGAAAATGAGGAAAGAAAAATATATACTCGAGTGGGCTTGATGACGTTTAATTCTCATTTAGATGAG
AGATAGCCACACCCATAAACTAATGCTACAGATTTATT----------------------------TCAAGGATTTATTG
GGCTCTATAGGTTACTGCATAATGATACACATTAATGTTTTTTTC----TTTTTTTCATTCTGTTCCGAATTAGTTTATT
TGGGTTTTAT-TTATTTTTACGCCGCGTGTAACTACACTTGCATGACTGGTCGGCTGTGCGCAACAGTATGTCCACATGC
CACCCACTACTGTATTCGCGTATTTTCTAAAATAGAAATGCAACAAAAAATTCAAGAATAAAACAT-AAAATGGGG-AAA
TATAAAAGTGAAAAAA---TGGAAGCAGGAAAGAAAAATATGTACTACCTCCGTTTCAGTTTACAAGTCCTGCGCGTATA
CCTAGGTTGCCAATTTTATCACCCTAATATAAACTATATAACATAAAAATTATATCTTTTGAAAGTAGAAACTCCGAAGT
TTATGTTGGTATATTTTTTTGTAATATATGACTTGTATTAGGTTGGTTACGACCTAGGGATATGCGCACGCCCTGTAAAC
TGAGAGAGAGGTAGTACTACTCAAGTGAGCTAGATTAAAATTAATGCTACACATTTAATTCTCATTTAGATTAGAGA---
--------------------------------------------------------------------------------
------TACTAGCCACACCCAAAAACTAATGCTACACATTGATATTAAGGATTCATTGGCTTCTACAGGTTGCTGCATAA
TGATACACATTAATTGCTCTAGATATGCTGCATGTACCAATATAC-------TTTCAATTTGGCTACT--ACTTCTTTGC
AGGGCCGTTCTATAAAAGTCGTCCTTGG-TGTT-----------------------------------------------
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>chr1D_539
ATGTCCACAAGCCATCCACTACTGCATTTGGACATTTTCTAAATAGAAATGCAATAAAAAAGTTGAGAATAAAGCGTAAA
ATGAGATAAATATAGAACGGAAAGAAAATGGAAAAGAAGGAAAGAAAAAAATATACTCAAGTAAGCTAGATGAGTCTAAT
TC------------------------------------------------------------------------------
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----------------------------------------TCATTTAGATCAGAGATAGCCCCACCCATAAACTAATGCT
ACACATTGATTTTAAGGATTTATTTATTGGT-------------------------------------------------
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------------------------------------------------------------------------------CT
CTATAGGTTGCTGCATAACGATATACATTAATGATT---TTGCTTTTCTT---------TTGAATTACTTTATCTGGGTT
CTATTTTTGTTGTTTACACACCGCGCCTAACTACTTTTGCATGACTGCCCAGATGTGCGCAATAGTGTGTCCACATGCCA
TCCACTACTCCATTTGCATATTTTCTAATATAGAAATGCAATAAAAAAGTTGAGGATAAANNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNGCTCTATAGGTTGCAGCATAATGATACACATGAATGATTT-----------TTTTTCC
TTTTCTACTGGATTAATTTATCTGGTTT-----TTTTTTTCACGCGGCGTGTAACTACACTTGTACGACTTCCCAGTTGT
GTGCAAAGTATGTTCACAGGCCGTCCACTACTGCATTTGCATAATATTTTAAAATAGAAATGCAATAAAAA--GTCTAGA
ATAAAACGTAAAATGAGATAA---ATATAAAAGTGAAAGAAAATGGGAAGGAAGAAAGAAAAA-----TATATACTCAAG
TGAGCTAGAGGAGATTTAATTCTCATTTAGATCGA---------------------------------------------
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AGATAGCCACACCCATAAACTAATGCTACACATTGATTATAAA----------------------------GATTTATTG
GGCTCTATAGGTTGCTGCATAATGATACACATTAATGATTTTTG-----TTTTTTTCCTATTCTACCGAATTATTTTATC
TGGGTTCTATATTTTTCTCACGCCACGCGTAACTACACTTGCATGACTGCCCGCTG------------ATGTCCACAAGC
CGTCCAGGACTGCATTTGCATTTTTTAAATAGTTGAA-------------------AATAAAACGT-AAGACGAGAAAAA
TATATAAGAGAAAGAAAATGGAAAGGAGGAATGAAAATTAT---------------------------------------
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------------------ACTCATGTGAACTAGATGAG--------------ATTTAATTCTCATTTAGATCAGAGA---
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------TATCCG---CACCCATAAACTAATGCTACACATTGATTTTAAGGATTCATTGGCTTCTACAGGTTGCTGCATAA
TGATACACATTAATTTCTGAAGATATGCTGCATGCA-CAGTATATTTTCAGTTTTCAGTTTGGCTACT--ACTCCTTGGC
AGGGCCGTTCTATAAAAGCCATTCTTGTGTTCCTTTG-AT--ACACACAGAGGTTGCAGAGCGCGCA--------GACAG
AGATCGAG-CAAACATGAAGAACACACCAACCATCTTCACCCTCGCCGTCTCTCTCGGGGCAATCGCCCTGCTTTCCGGC
AGCACCGACGCCACCACATGCGCCGGCGACCCGTCCATGTCCGTTGCCGACGCGTGCCACAAGACGAGCGCCTGGCAGGG
CCAGCGCGAGCTGGAGCTCTGCCGGCAGACGCTGCGCGGCGCACGGGACGGCCTCACGGCCAGCGCCTACGGCATCATCG
CCGTGAGGGCCGCCCTTGAGTCGTCCGAGGCCACCGAGGGCGCCGGCAAGAAGCTGGCGCAGGACCCGAAGATCTCCGAG
GACGTGCGGGCGGTGTACCAAACCTGCGTGGACATGTACGGCTTCGCGCGCGCCGACGTCGCCGCCATGGAAGGCGCGCT
GAAGGCCTGCTCGCTCGCCGACTTCCGGCGCTTCTGGGAGGGCGCACTCGCCTCGGTGGATTACTGCGCGCGGAAGCTGC
GGCTCGTCGACGGCGACGTGCTCCGCCGCACGGTGGAGGCGGACAGGGAGAGGATCTTGCTCGCTTTCATCCTGGGAGGG
CTTTCTTTTCCGAAATGATAGTATGCCTG----GATGTGGAGATGTGGACTTTGGGTCGATAATAATTCGGTGGTAACCC
AATGGATC---------TGCGG-----GGGTATTGGTATTTTTCAAAATAGCATGTCTAGATTTGGTTGAAAGGCGTTTC
AAAAGAAAAAAAAGTACTGAC---AAAATTGATTGAGACATG----TCATCTT-CTGGAATGCGGTAGCA---TGTGCTT
CTCGCATTTATTTTTGATTCGACTCCACTCGC--TTTGAGCTGAGCTGA-AAAGGCGTTGTC------------------
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>chr1A_576
AAATG---------------------------------------------------------------------------
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--------------------------AAAGAAAATGGGAAAGGAGCAAAGAAAAATATATATACTCAAGTAAGCTAGATA
AGATTTAATTCTGATTTAGAACAAAGATAGTGGCACCCATAAACTAATGCTACACATTGATTTTAAAAATTTATTGGACT
CTATAGTTTGTTGCATAATGATACGCATTAATGATTGTTTTTCTTCCTTTTCCCTTTTACTGAATTACTTTATCTGGGT-
CTATTTTTATTTTTTCCGCGCCGTGCGTAACTACACTTGCACAACTGCCCGGCCGTGCTCAACGGTATGTCCACATGCCA
CCCACTACTGCATTTGCATATTTTCTAAAATAGAAATGCAA---------------------------------------
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-------------------------------------------------------------------AAAA--GGTCAAT
AATAAACATAAAATGAGAAAAAAAATATAGAAGTGAAATAAAATGGAAAAGGGGGGAGAAAAAATATATATG--CTCAAG
TGAGCTAGATGAGATTTAATTCTCATTTAGATCA----------------------------------------------
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-------------------------------------------------------------------------------G
AGATAGGCACACCCATAAACTAATGCTACACATTGATT----------------------------TTAAGCATTTATTG
GGCTCTATAGGTTACTGC--------------------------------------------------------------
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CATCCACTACTGTATTCGGTATTGTTTTAAAATAGAAATGCAACAAAAAATTCAAGAATAAAACGTAAAAATGGGAAAAA
TATAAAAGTGAAAAAAAA--GGAAGCAGGAAAGATAAATATGTACT----------------------------------
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---------------------CAGGTGAGCTAGATTAAGATTAATGCTACACATTTAATTCTCATTTAGATTAGAGA---
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------TACTAGCCACACCCGAAAACTAATGCTACACATTGATATTAAAGATTCATTGGCTTCTACAGCTTGCTGCATAA
TGATACGCATTAATTGCTCTAGATATGCTGCATGTA-CAGTATAT-------TTTCAGTTTGGCTACTACACTCCTTGGC
AGGGCCGTTCTATAAAAGCCATCCTTGTGTTCCTTCCCAT--ACACACAGAGGTTGCAGAGCGCGCATAGGTTTATACAG
AGATCGAG-CAAACATGAAGAACACACCAATCATCTGCGTCGTCGCGGTATCTCTCGGGGCCATCTCCTTGCTCTCCGGC
AGCACCGACGCCACCGCATGCGCCGGCGACCCGTCCATGTCCGTCGCCGACGCGTGCCACAAGACGAGCGCCTGGCAGGG
CCAGCGCGAGCTGGAGCTCTGCCGGCAGACGCTGCGCGGCGCACGGGACGGCCTCACGGCCAGCGCCTACGGCGTCATCG
CCGTGAGGGCCGCCCTCCAGTCGTCCGAGGCCACCGAGAGCGCCGGCAAGAAGCTGGCGCAGGACCCGAAGATCTCCGAG
GACGCGCGGGCGGTGTACCAGAGCTGCGTGGACATGTACGGCTTCGCGCACGCGGACGTCGCCGCCATGGAAGGCGCGCT
CAAGGCCTGCTCGCTCGCGGACTTCCGGCGCTTCTGGGAGGGCGCCCTCGCCTCGGTGGATCACTGCGCGCGGAAGCTCC
AGCTCGTCGACGGCGACGTGCTCCGCCGCACGGTGGAGGCGGACAGGGAGAGGATCTTGCTCGCTTTCATCCTGGGAGGG
CTTTCTTTTCCAAAATTGTAGTATGCCTGCCTGGATGTGGAGATGTGGATTTTGGGTTGGTAATAATTCGGTGGTAACCC
GACC-ATA---------TGCGG-----TGGTATTTGTAGT-------------TGTCTAGATTTGGTTGCAAGGTGTTTC
AGATGATAAAAAACCTACTGGCAAAAAATTGATTGAAACATG----TCATCTTTCTGGAATGCTGTAGCATGC-------
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--------------------------------------------------------GCCTCTAAACTGTGATCCAAGATC
ACCCCAAGATCAC---------------------------------------CAGACACAAGGGCCGCTTTTGAGTCTAG
TC------------------------------------------------------------------------------
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>chr1D_821
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AGATTTAATTCTGATTTAGAACAAAGATAGTGGCACCCATAAACTAATGCTACACATTGATTTTAAAAATTTATTGGATT
CTATAGTTTGTTGCATAATGATACACATTAATGATT---TTTTTTCTTTTTCCCTTTTATTGAATTACTTTATCTAGGT-
CTATTTTTGTTTTTTCCGCGTCGTGCATAACTACACTTGCACAACTGCCCGGCCGTGCTCAACGGTATGTGCACATGCCA
CCCACTACTGCATTTGCATATTTTCTAAAATAGAAATGCAA---------------------------------------
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-------------------------------------------------------------------AAAA--GGTCAAG
AATAAACATAAAATGAGAA--AAAATATAGAGGTGAAATAAAATGAAAAAGGGGGGAGAAAA---ATATATA--CTCAAG
TGAGCTTGATGTGCTTTAATTCTCATTTAGATTA----------------------------------------------
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-------------------------------------------------------------------------------G
AGATAGCCACACCAATAAACTAATGCTACACATTGATTACCCTTAAAAAAATGCTACACATTGATTTTAAGCATTTATTG
GGCTCTATAGGTTACTACATAATGATACACATTAATGGTTTTATTTTAATTTTTTCCATTTTGTACTAAATTAGTTTATT
TGGGTTCTAT-TTATTTTTATGCCGCGTGTAACTACACTTGCATGACTGGCCGACTGTGCTCAACAGTATGTCCACATGC
CACCCACTACTGCATTTGAATATTTTCTAAAATAGAAATGCAAAAGGAA--TCAAGAATATAACGT-AAAATGGGGAAAA
TATAAAAGTGAAAAAAA-TTGGAAGCAGGAAAGATAAATATGTACT----------------------------------
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---------------------CAAGTGAGCTAGATTAAGATTAATGCTACACATTTAGTTCTCATTTAGATTTGAGATAC
CCCCAAAAACTAATGCTACACATTAATTGCTCAAAATATAAGTGTGATTAATACTGTACATGCAGCATATCTTGAGATTA
ATGGAGTACTAGCCACACCCAAAAACTAATGCTACACATTGATATTAAAGATTCATTGGCTTCTACAGGTTGCTGCATAA
TGATACACATTAATTGCTCTAGATATGCTGCATGTA-CAGTATAT-------TTTCAGTTTGGCTACT--ACTCCTTGGC
AGGGCCGTTCTATAAAAGCCGTCCTTTG-TTCCTTTCGAT------ACACAGGTCGAAGAACGCGCATAGCTTTAAACAG
AGATCGAG-CAAACATGAAGAACACACACATCATCTGCGCCCTCGCCGTATCTCTCGGGGCCATCGCCCTGCTCTCCGGC
AGCACCGACG---CCGCATGCGCCGGCGACCCGTCCATGTCCGTCGCCGACGCGTGCCACAAGACGAGCGCCTGGCAGGG
CCAGCGCGAGCTGGAGCTCTGCCGGCAGACGCTGCGCGGCGCACGGGACGGCCTCACGGCCAGCGCCTACGGCATCATCG
CCGTGAGGGCCGCCCTCGAGTCGTGCAAGGGCACCGAGAGCGCCGGCAAGAAGCTGGCGCAGGACCCGAAGATCTCGGAG
GACGTGCGGGTGATGTACCAAACCTGCGTTGACATGTACGGCTTCGCGCAGGCGGACGTCGCCGCCATGGAAGGCGCGCT
CAAGTCCTGCTCGCTCGCGGACTTCCGGCGCTTCTGGGAGGGCGCCCTCGTCTCGGTGGATCACTGCGCGGGGAAGCTGC
GGCTCGTGGACGGCGACGTGCTGCAGCGCACGGTCTCGGCGGACAGGGAGAGGATCTTGCTCGCTTTCATCCTGGGAGGG
CTTTCTTTTCCAAAATGGTAGTATGCGTG----GATGTGGAGATGTGGATTTTGTGTCGATAATAATTCGGTGGAAACGC
AATA-ATACATGGCTTATGCAG-----TGGTATTTCTAGC-------------TGGCTAGATTTGGTTGAAAGGTGTTTC
TTTAGAAAAAAAACTACTGGC---AAAATTGATTGAAACATG----TCATCTT-CTGGAATGCTGTAGCATTGTGTGCTT
GTCACATTTATTTTTGATTCGACTCTGCTCATATTTTGAACTGAGCTGGGAAA---------------------------
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>chr1B_1015
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-----------------------CTTGGGTTCCTTCCGATACACACACAGAGGTTGCTGAACGCGCATAGGTTTAGACAG
AGATCGAACCAAACATGAAGAGCACACCCATCATCTGCGCCCTCGCCGTATCTCTCGGGGCCATCGCGCTGCTCTCCGGC
AGCACCGATG---CCGCATGCGCCGGCGACCGGTCCATGTCCGTCGCCGGCGCATGCGACAAGACGAGCGCGTGGCAGGG
CCAGCGCGAGATGGAGCTCTGCCAGAAGACGCTGCGCGGCGCACGGGACGGCCTCACGGCCAGCGCCTACGGCATCATCG
CCGTGAGGGCCGCCCTTCAGTCGTCCGAGGCCACCGAGAGCGCCGGCAAGAAGCTGGCGCAGGACCCGAAGATCTCCGAG
GACGTGCGGGCGGTGTACCAGAGCTGCGTGGGCATGTACGGCTTCGCGCGCGCGGACGTCGCCGCCATGGAAGGCGCGCT
GAAGGCCTGCTCGCTCGCGGACTTCCGGCGCTTCTGGGAGAGGGCGCTCGCCTCGGTGGATTACTGCGCGCGGAAGCTGC
GGCTCGTCGACGGCGACGTGCTGCAGCGCACGGTCTCGGCGGACAGGGAGAGGATCTTGCTCGCTTTCATCATGGGAGGG
CTTTCTTTTCAGAAATGATAGTATGCCTGCCTGGATGTGGAGGTGTGGATTTTGTGTCCGTAATAATTCGGTGGAAACCC
AGTG-ATA---------TGAGGGGGTTTGGTATTTGTAGT-------------TGTCTAGATTTGGTTGAAAGGTGTTTC
CTAA-AAAAAAAACTACTGGC---AAAATTGATTGAAACATGCATGTCACCTT-CTGGAATGCTGTAGCATTGTGTGTTT
CTCACATTTATTTTTGATTCCACTCTGCTCGTATTTTGAACTG-------------------------------------
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-----------------------------------------------------------------------------
>SNPs
S------------------------------S-----------------S-------------------S----------
------S-------------------------------------S----S-----------------------------S
----S------SS--------S-------S------------S----S----------S------S----S---------
--S---------------------------------S-------------------SS----------------------
----------------------S----------S--------------S------------------SS-----------
S---------S--------------S-----------------------S-------S-----------S---S------
-S--------------------------S----------S----------S-----------------S---S-------
---------------------------------------------S-S---------S----S------S--------S-
--S------------------------------------S-------------S--------------------------
--S--------------------S--S----SSS--------------------------------------------S-
-----S------S-------S---------------------S---------------------S--------------S
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------------------------------------------------------------S-------------------
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------------------------------------------------------------------S-------------
---------S----------------------------------------------------------------------
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-------------S------------------------------------------SS----------------------
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-----S--------------------------------------------------------------------------
----------------------------------------------------------------------SS--S-----
----------------------S---------------------S------S---------S------------------
------------------------------SS-S----------------------------------------------
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---S------------------------S--------------------------S--S------S--S----S------
----------SSS---------------------------------------------------S---S-----------
--------------------------------------------------------------SSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------SS-----------
------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------------------
--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_450
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------------------------------GGATGGGTATGGGGAGTCCT------------------------------
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>reverse_4838
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-------------------------------------AATTACGGTGCTGTCGGTGT-----------------------
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-----------------------------------------------------------------------------
