>input_sequence_71792
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-------------------------------------------------------------------GAAGCACAAGAGA
ACCTCC------------TTCTTCTTCTT---CTTCTTCTTCCA---------GATTAACCAGTCCAAGAAGAAGAGTCC
GCCGTGGTTTTCTAGGTAA-TAATCCAACTTTCTAAGTT-AGGCATGGAGGCTGTAGAGCCGGCGGTGGTGGTGAGCTGC
GAGTGCTGCGGCCTGGAGGAGGAGTGCACCGGCGAGTACATCGGCGGCGTGAGGGCCTGCTTCGGGGGCCGGTGGCTGTG
CGGGCTGTGCTCCGAGGCCGTCAAGTACGAGGCCGGCCGCAGCAAGCGCGCCGAGGCCATGGGCGTGGAGGAGGCCGTGC
GGGCGCACATGGCCTTCTGCGGCATGTTCAGGCGCGGCGGCCCCGCGGAGCGCGTGACCGAGGGCATTTGCCGGATGCTT
AGGCG---CACCGCCTGGGAG-AAG---CACCGGGCCAC---CTCGTCGTCCTCGTCGCGGCCGACAGCGCCGGCGACAG
TGGCGTCAGCGTCAGG---GCACCACCGCGCCTCGGTGCCGTCCGCCTGAGTTGATGTCTGCTTCTTGCAACAAGGTGCA
TGCTTCGGACAAGTATATGCTTATACGA--------------------A------TGCTT-------------------A
TATGCATGTCATGT---GATGGTAGTAT----------------------------------------------------
--------------------------------------------------------------------------------
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----ATCTTGTTTTGAATCTATTCTGGAAATTACACACAAGTGTT----GGAGTACT--ATGTAGTACGAGGTTAAAGTT
CAATTAATCTTCACATGAGGA-----------------------------------------------------------
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------------------------------------------------------
>chr1A_1_TraesCS1A01G393400
TTTTGAGTCCTGTACGGGAGAAGGGTGATAAGGTTTTTGGGGAGCGCTTAGCGCGACTGGTGGCTGCTTCATCACGGACG
ATCTGGTCGCCGACGACTACTTCCCCGACGACGACTTCTTCCCCGACATCCACGACCTCCTCGACGACATGGAAGGCGAG
GACACTGACCCCAAGTCCAGCGCTTCTGCTGCTGCTGTCCCGTACGTGTTCTTGTCTTTCCTGTTAAAGGTTATGCCGCA
GTTCCTTGTTCTAGTCCTTGTCCTACACATGATAGGTTCTAGTTCATATATGCAATTAGTTCTACTGTCCGCTATAGATA
TGCTAGGCTACGGTTCATATATGCAGAAGCTATTTACCTTCTCTTTGTTAGAACGCATGACTTGTTTATCTCTATTATAT
TACTCATGCTTTATCTAGTATTTCTATTAATAAAATCACTTGATAAATTGCTCATATTTCTAACAAATACTAAGG-GACC
AATAAATCAGGACTGAGGTAGTAGCAGCTTGCATAATGTAAACG-GGCAAAAATAT--CAGGCAAGACGGCATGCACCTG
GTGGATGTGTCACCAGCTGG-----------CCGGCCGGTGAGCG----GTGGCACATGAGT----CCATGTGACAAAAC
AAATTGTTCTTCGTTCTGGTCGCGGTCGCCATGACAGCGCGCGAGAGCAGAGGTGCCCTGAGCCTTCGAAACGATATACT
CCCTCCGTTCGTGAACAAGTGTACATCTAGCTTTTGTCTTAAGTCAAAGTTTTAGAAGTTTGATCACTTTTCTAGGAAAA
AGTAAAAGCATTTATGGCACCAAATTAGTATCAACAGATTCATTTTGAAATGTACTTTGATAATATATTAATTTGATGTC
ATATATATTACTACTATTTTCTATAAAGTTGGTCAAAATTTTAAAATTTTGACATAGAACAAAAGCTAGATGTACACTTA
TTTACGGACGGAGGGAGTATAAACGAACCTACGG----CTGCAGACACCACACAAAGCACAGCACGAGAAGCACAAGAGA
ACCTCC------------TTCTTCTTCTT---CTTCTTCTTCCA---------GATTAACCAGTCCAAGAAGAAGAGTCC
GCCGTGGTTTTCTAGGTAA-TAATCCAACTTTCTAAGTT-AGGCATGGAGGCTGTAGAGCCGGCGGTGGTGGTGAGCTGC
GAGTGCTGCGGCCTGGAGGAGGAGTGCACCGGCGAGTACATCGGCGGCGTGAGGGCCTGCTTCGGGGGCCGGTGGCTGTG
CGGGCTGTGCTCCGAGGCCGTCAAGTACGAGGCCGGCCGCAGCAAGCGCGCCGAGGCCATGGGCGTGGAGGAGGCCGTGC
GGGCGCACATGGCCTTCTGCGGCATGTTCAGGCGCGGCGGCCCCGCGGAGCGCGTGACCGAGGGCATTTGCCGGATGCTT
AGGCG---CACCGCCTGGGAG-AAG---CACCGGGCCAC---CTCGTCGTCCTCGTCGCGGCCGACAGCGCCGGCGACAG
TGGCGTCAGCGTCAGG---GCACCACCGCGCCTCGGTGCCGTCCGCCTGAGTTGATGTCTGCTTCTTGCAACAAGGTGCA
TGCTTCGGACAAGTATATGCTTATACGA--------------------A------TGCTT-------------------A
TATGCATGTCATGT---GATGGTAGTAT----------------------------------------------------
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----ATCTTGTTTTGAATCTATTCTGGAAATTACACACAAGTGTT----GGAGTACT--ATGTAGTACGAGGTTAAAGTT
CAATTAATCTTCACATGAGGATCTTGATGCAGCTG-------------TGTTCTTGGCGTCGATCCTTTCGAGGTGTAAT
CATATAC----------CGACTGCTGCAGTGCACAC----TCGATCTGCTTGAAAGTTGTGTCTTCTTCGTTGCGGTTCC
TTGTCCGTCAGAATGATCTTGCACTTGTTCTTCAGA-G---------TTT-----TTTCTTTGTTTCTTTGCGCACCGGC
TTCAGTTTTCGACCCGATCGACAAGCCGACGCCATGGCCGGGCCCGT------CGCCTTCGTCATCTGTTGCTTTCGCTA
TCCTCGTCCTCAACACACGTGCAGAAACATGAGAGGTTGATACTGCTAGTGCATGCTCATCCGT-GGAGAATTTTGTTTA
GATAATGGATGGAAGAAAACTTCTCCCGTGGAGAATCAAATCCGA-----------------ATCCACTACAACTTTGTC
TGATACACGTACGTCCTGAGTACAAAAGCTCTGGCATGCATCCTAGCTTGACACTTGTTGATTACCAAGCTAACTACTTT
TCTGAGGGATGGCAATCTAATAAGTAGGAGTACATAGCTTTCTTTTTGTGTCCCGGAGAAAATGCACACTGCACACATGT
ATACATA-------CACAAGCTTTTTGATTGACGTCCAAGTTCCAAGATGCTCGATTTGCTTTAGATGATGATGATACAT
ACTTGCACACTAACCAATCCGAGTGACCGCCACTTACAGGCAATATACGGATGAACCTTATGGACTGTCGCCACTAACCA
ATCCCTCTCCCTCGTTGATTTCAAGGGTGGGTCCCGCTGGCCCCAGTTTCCAGTTAAACATTGCCAGCTCAGTCCGTCAA
TTAGTTTCCGTGGCTTTTGTCCGTAAGTCTAGCAAAGTTCGGCATCGGCACGGCGGAGATCGATCAAGCACAATCATGGC
ACACTCACATTCGAAATTGCTTCACTTGCGAAAAAGGGTTTCCCCCGTTTTATATATATAAAGCAACCAACACCGCAACA
ACCGAGAACACCGATATAAACACACGTCACCACCACATAAACACACAACCCAAG
>chr1A_465
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----------------------------------------------------------------AAATACTGAGGAGACC
AATAAATCGGGACTGAGGTAGTAGCAGCTTGCATAATGTAAACG-GGCAAAAATAT--CAGGCAACACGGCATGCACCTG
GTGGACGTGTCACC---CGG-----------CCGGCCGATGAGCG----GTGGTACATGAGT----CCATGTGACAAAAC
AAACTGTTCTTCGCTCGGGTCGCAGTCGCCATGACAGCGCGGGAGAGCAGAGGTGCCCTGGGCCTCCTAATCGATATC--
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------TAAACGTACCTACCG----CTGCACACACCACACAAAGCACAGCACCAAAAGCACAAGAGA
ACCTTC------------TTCATCATCTT---CTTATTCTTCTTCTTCTTCTTGATTAACCAGTCCAAGAAGAAGAGTCC
GCCGTGGTTTTCTAGGTAA-TAATCCAACTTTCTAAGTT-AGGCATGGAGGCTGTAGATCCGGCGGTGGTGGTGAGCTGC
GAGTGCTGCGGCCTGGAGGAGGAGTGCACCGGCGAGTACATTGGCGGCGTGAGGGCCTGCTTCGGGGGCAGGTGGCTGTG
CGGGCTGTGCTCCGAGGCCGTCAAGTACGAGGCCGGCCGCAGCAAGCGCACCGCGGCCATGGGCGTGGAGGAGGCCGTGC
GGGCGCACATGGCCTTCTGCCGCATGTTCAGGCGCGGCGGCCCCGCGGAGCGCGTGGCCGAGGGCATGTGCCGGATGCTT
AGGCG---CACCGCGTGCGAG-AAG---CACCGGGCCAC---CTCATCGTCCTCGTCGCGGCCGACAGCGCCGGCGACGG
TAGCGTCAGCGTCCGG---GCACCACCGCGCCTCGGTGCCGTCCCCCCGAGTTGATGTCTGCTTCTTGAGACGAGGTG-A
TGCTTCGGACATACGTCTTCCTCGGCAAA---------------------------GCTAGCTAGCTATATATATGCCAA
TATGCATGTGAT------GTAGTAGTAT----------------------------------------------------
--------------------------------------------------------------------------------
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----ATTTTGTTTTGAATCTATTCCGAAAACTACACACAAGTGTTTGATGGAG-----TATTATATACGAGGTTAAAGCT
CAATTAATCTTCACATGAAGATCTTGATCTACCCAACGAGCGAGCAGCTGTTCTTGGCCGAAATCCTTTCGCGGTGTAAT
AATATACGGACTGG------------------------------------------------------------------
-------------------TGCACTTGTTCTTCAGAGG---------TTT-----TTTCTTTGTTTCTTTGCGCACCGGC
TTCAGTTTTCTACCCGATCGACGAGACGAGGCCATGGCCAGGCCCGT------CGCCTTCGCCGTCTGTTGCTTTCGCTA
TCCTCGCCCTCAACACACGTGCAGAAATATGAGAGGTTGATACTGCTACTGCATGCTCACCCGT-GGAGAACTTTGTTTA
GATAATGGA----AGAGGACTTCTCCCGTGGAGAATGTGA-GCTAGTCACTGGAAGATTTGTGTCCACTGCAGGTTTGTC
TGATAGACATACGTCCTGAGTACAAAAGCTCTGGCTTGCATTCTAGCTTGATACTTCCTGGCTACCA-------------
-------------------------------------------------------GAGAAAATGCACACTGCACACATGT
ATACATATTACATACAAAAGCTTTTTGATCGACGTCCAAGTTCGAATATGAGCGATTTGCTTTAGAT-------------
--------------------------------------------------------------------------------
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------------------------------------------------------
>chr5D_499
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-------------------AGGAGCAGCTAGCATAGTGTAAACGTGGCAAAAATAT--CAGGCAACACGGCATGCACCTG
GTGGATGTGTCACC---TGG-----------CCGGCCGGTGAGCGGCCGGGGGTACGTGAGT----CCATGTGACAAAAC
AAACTGTTGTTCGCTCGGGTCGCGGTCGCCATGACAGCGCGCGAGAGCCGAGGTGCCCTGGGCCTCCCAAACGAT-----
--------------------------------------------------------------------------------
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----------------ATATAAACGAACTTACCGCTGTCTGCACACACCACACAAA-CACAGCACGAAAAGCACAAAAGA
ACCTGA------------TTCTTCTTCTT------CTTCTTTCA---------GATTAACCAGTCCAAGAAGAAGAGCCC
GCCGTGGTTTTCTAGGTAA-TAATCCAACTTTCTAAGTT-AGACATGGAGGCGGTGGAGCCGACGGTGGTGGTGAGCTGC
GTGTGCTGCGGCCTGGAGGAGGAGTGCACCGGCGAGTACATCGGCGGCGTGAGGGCCTACTTCGGGGGCCGGTGGCTGTG
CGGGCTGTGCTCCGAGTCCGTCAAGTACGAGGCCGGCTGCAGCAAGCGCACCGCGGCCATGGGCGTGGAGGAGGCCGTGC
GGGCGCACATGGCCTTCTGCCGCATGTTCAGGCGCGGCGGCCCCGCGGAGCGCGTGGCCGAGGGCATGTGCCAGATGCTT
AGGTG---CGCCGCGTGCGAG-AAG---CACCGGGCCAC---CTCATCATCCTCGTCGCGGCGGACATCGCCGGCGACGG
TGGCGTCAGCGTCCGG---GCACCGCCGCGCCTCGGTGCCGTCCGCCTGAGTTGATGTCTGCTTCTTGCGACGAGGTGCA
TGCTTCGGACATACGTCTTCCTCACCACA---------------------------GCTT-------------------A
TATGCTTGTCATGT---GATAGTAGTAT----------------------------------------------------
--------------------------------------------------------------------------------
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----ATTTTGTTTTGAATCTATTCCGGAAACTATACACAAGTG----ATGGAGTACTATATGTAGTACGAGGTTAAAGTT
CAATTAATCTTCACATGAGGATCTTGATCTACCCAACGACCGAGCAGCTCTTCTTGGCGTCTATCCTTTCGAGGTGTAAC
AT--------------------------------------TCGATCTGCTTGAAAGTTGTTTCTTCTTCGTTGCGGTTCC
CCGTCTGTCGGAATGATCTTGCACTTGTTCTTCAGA-G---------ATT-----TT------TTTCTTTGCGCACCGGC
TTCAGTTTTCGACCTGGTCGACGAGACGAGGCCATGGCCCGGCCCGT------CGCCTTCGTCGTCTGTTGTTTTCGCTA
TCCTCGCCCTCAACACACGTGCAGAAACATGAGAGGTTGATACTGCTAGTGCATGCTCACCCGT-GGAGAATTTTGTTTA
GATAATGGA----AGAATACTTCTCCCGTGAAGAAT--------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------
>chr5A_499
--------------------------------------------------------------------------------
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-------------------AGGAGCAGCTAGCATAGTGTAAACGTGGCAAAAATAT--CAGGCAACACGGCATGCACCTG
GTGGATGTGTCACC---TGG-----------CCGGCCGGTGAGGC----GGGGTACGTGAGT----CCAAGCAACAAAAC
AAACTGTTCTTCGCTCGGGTCGCGGTCGCCATGACAGCGCGCGAGAGCGGAGGTGCCCTGGGCCTCCCAAACGAT-----
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------ATATAAACGAACCTGCTGCTGTCTGCACACACCACACAAAGCACAGCACGAAAAGCACAATAGA
ACCTGA------------TTCTTCTTCTT---CTTCTTCTTTCA---------GATTAACCAGTCCAAGAAGAAGAGCCC
GCCGTCGTTTTCTAGGTAA-TAATCCAACTTTCTAAAGTTAGACATGGA------------GGCGGTGGTGGTGAGCTGC
GATTGCTGCGGCCTGGAGGAGAAGTGCACCGGCGAGTACATCGGCGGCGTGAGGGCCTACTTCGGGGGCCGGTGGCTGTG
CGGGCTTTGCTCCGAGTCCGTCAAGTACGAGGCCAGCCGCAGCAAGCGCGCCGCGGCCATGGGCGTGGAGGAGGCCGTGC
GGGCGCACATGGCCTTCTGCCGCATGTTCAGGCGCGGCGGCCCCGCGGAGCGCGTGGCCAAGGGCATGTGCCAGATGCTT
AGGCG---CGCCGCGTGCGAG-A-G---CACCGGGCCAC---CTCATCGTCCTCGTCGCGGCGGACATCGCCGGCGACGG
CGGCGTCAGCGTCCGG---GCACCACCGCGCCTCGGTGCCGTCCGCCTGAGTTGATGCCTGCTTCTTGCGACGAGGTG-A
TGCTTCGG-----------------CACAATCTAGCTAGCTACTGTATA------TGCCT-------------------A
TATGCATGCGATGT---AATAGTATATTTTGTTTGTTTGAGACAGGACTTTTAGGTCCCGGGGGTCGGGACACCCGGCTA
TCTCGCCGTTCATTCACACTGTCCTGACTTGGCGATCTGTGCCCCGCGCTGTAATGGAGAATGGGGTTAAAGGCTATGTG
AACAGTAAAAGCCGAAGTAAGTAAACTATTTAAAAATGGCAATGGGCTGCGTAGGTCACTGTTCAACCTATACACAGAAT
CTCCCTCACCTGTCACACAGCTCAGTCATTGCTCTCCTTTCCCACAGGGATTTGCAGAGTCTTGCCGGCCCATCCCATCA
TTCTTTATCAAGTAAAGAGCTACATCAACTTTCCCGATCAAAATAACCAAGTAAATAATTGTGCCTCACTAAGATGCCGG
ACCAGAAAATTATAAAATAAAGACGGTCCATGCATGAATCGATTCATAACATGCACAGCAGTATAACCATTGATTCATAG
CGTTCCACCTAGCTCGATCAGTCCAAACCAGGAACAGTTTCGCCATCGAGTAAAATAAGGATGGCCCATGCATGGCCTGA
CGCCGCTGTCAGGAACAGTAGCCAGCTATGCAAAACACGACTGATATGACAACTCGTTTCAGCACTATGGCTGCTCCTGC
TGCCCCAAGATGGCTGCTACCTATAGCCTACTAGTCCATAGTAGCAACACAATTAGGAAGGTCAAATGGACTGGTAAGCA
TGCAGACGCTGCAGATGCTCTGCAGTTTGACAGAAGACCATATGAATCTCAACGAGGTCGGATGGATAGGAAAACAGGGT
GCCCCGACCCCGGGGGACGAGGATCCCCTGCCGTGCGGCAGGGTGCCGTTCCGTCGCTGACTCATGGGTCCGACTGAAAC
TTGACCCACCTGTCAGTGGCCTAACGGCAGACGCCGTACGTCAGAGGAGCTTCCTCCGACCCCGGGAGCTACCACATCTT
TTCGATTTTGTTTTGAATTTATTCCGGAAACTACACACGAGTGTTTGATGGAGTACTATATAATGTACGAGGTTAAAGCT
CATTTAATCTTCGCATGAGGATCTTGATCTACCCAACGACCGAGCCGCTGTTCTTGGCCCAAATCCTTTCGAGGTGTAAT
CATATACAGATATACTCCGACTGGTGCAGTGCA---TCGATCGATCTGCTTGAGAGTGCTTTCCTCTTCGTTGCGGTTCT
CCGTCCGTCAGAATTACCTTGCGCTTGTTATGCATA-GTTTCTTTTCTTT-----TCTTTTTGTTTCTTTGCGCACCGGC
CTCAGTTTTCAACCCGATCGACGAGACGGCGCCATGGTCGGGCCCGTTGCCTTCGCCTTCGCCGTCTGTTGCTTTTGCTA
TCCTTGCCCTCAATACACGTGCAGAAACATGAGAGGTTGATACTGCTAGTGCATGCTCACCCGT-GGAGAATTTTGTTTA
GATAATGGATGGAAGAAAACTTCTCCCGTGGAGAATCAAATGTGAGTCACCCGAAGATTTGTGTCCACTGCAAGTTTGTC
TGATAGACGTACATCCTGAGTACAAAAGCTTTGGCATGCATCCTAGCTTGACAC--------------------------
--------------------------------------------------------------------------------
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>chr5D_513
TAA-----------------------------------------------------------------------------
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-------------------------------------GTAAACGTGGCAAAAATAT--CAGGCAACACGGCATGCACCTG
GTGGATGTGTCACC---TG------------CCGGCCGGTGAGCGGCCGGGGGTACGTGAGT----CCATGTGACAAAAC
AAACTGTTGTTCGCTCGGGTCGCGGTCGCCATGACAGCGCGCGAGAGCCGAGGTGCCCTGGGCCTCCCAAACGAT-----
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------ATATAAATGAACTTACCGCTGTCTGCACACACCACACAAA-CACAGCACGAAAAGCACAAGAGA
ACCTGA------------TTCTTCTTCTT------CTTCTTTCA---------GATTAACCAGTCCAAGAAGAAGAGCCC
GCCGTGGTTTTCTAGGTAA-TAATCCAACTTTCTAAGTT-AGACATGGAGGCGGTGGAGCCGGCGGTGGTGGTGAGCTGC
GTGTGCTGCGGCCTGGAGGAGGAGTGCACCCGCGAGTACATCGGCGGCGTGAGGGCCTACTTCGGGGGCCGGTGGCTGTG
CGGGCTGTGCTCCGAGTCCGTCAAGTACGAGGCCAGCCGCAGCAAGCGCACCGCGGCCATGGGCGTGGAGGAGGCCGTGC
GGGCGCACATGGCCTTCTGCCGCATGTTCAGGCGCGGCGGCCACGCGCTCC-----------------------------
-------------------------------------------------------------------------------G
TGGCGTCAGCGTCCGG---GCACCACCGCGCCTCGGTGCCGTCCGCCTGAGTTGATGTCTGCTTCTTGCGACGAGGTG-A
TGCTTCGGACATACGTCTTCCTCGGCACAAGCTAGCTAGC------ATA------TGCCT-------------------A
TATGCATGTGATGT---AGTAGTAGTAT----------------------------------------------------
--------------------------------------------------------------------------------
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----ATTTTGTTTTGAATCTATTCCGGAAACTACACACAAGTGTTTGATGGAG-----TACTATATACGAGGTTAAAGCT
CAATTAATCTTCACATGAGGATCTTGATCTACCCAACGACCGAGCAGCTGTTCTTGGCCCAAATCCTTTCGAGGTGTAAT
CATATAC--------TCCGACTGGTGCAGTGCACACTCGATCGATCTGCTTGAGAGTTCTTTCCTCTTCGTTGCGGTTCC
CCGTCCGTTAGAACGATCTTGA-CTTGTTATTCAGA-GTTTCTT-TCTTT-----TTTGTTTGTTTCTTTGCGCACCGGC
TTCAGTTTTCGACCCGATCGACGAGACGGCGCCATGGCCGGGCCCGTTGCC------TTCGTCGTCTGTTTCTTTCGCTA
TCCTCGCCCTCAACACACGTGCAGAAACATGAGAGGTTGATACTGCTA-----TGCTCATCCGT-GGAGAATTTTGTTTA
GATAATGGATGGAAGAAAACTTCTCCCGTGGAGAATCAAATGTGAGCCACCCGAAGATTTGTGTCCACTGCAAGTTTGTC
TGGTAGACTTACATCCT--GTACAAAAGCTCTGGCATGCATCCTAACTTGACCCTTGTTGGCTACCAAGCTAACTACT--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------------
>chr5B_513
TAAGTG--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------TAAACG-GGCTCAAAAAACACAGGCAACACGGCATGCACCTG
GTGGATGTGTCACC---CAAGAATGCTACACCCGCTCGGTGAGCG----GGGGTACGTGCGTGACTCCATGTGACAAAAC
AAACTGTTCGTCGCTCGGGTCGCGGTCGCCACACA-----GCGAGAGCCAGGGTGCCCTGGGCCTCCCAAACGAT-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------GTATAAATGGACCTACCG----TTGCACACACAACACAAAGCACAGCACGAAAAGCACAAGCGA
ACCTGA------------TTCTTCTTCTTC------------CA---------GATCAACCAGTCCAAGAAAAAGAGCCC
GCCGTGGTTTTCTAGCTAA-TAATTCAACTTTCTAAGCT-AGACATGGAGGCGGTGGAGTCGTCGGCGGTGGTGAGCTGC
GAGTGCTGCGGCCTGGGGGAGGAGTGCACCGGCGAGTACATAGTCCGCGTGAGGGCCTACTTCGGGGGCCGGTGGCTGTG
CGGGCTGTGCTCCGAGTCCGTCAAGTACGAGGCCGGCCGCAGCAAGCGCGCGGCGGCGATGGGCGTGGAGGAGGCCGTGC
GGGCGCACATGGCCTTCTGCCGCATGCTCAGGCGCGGCGGACCCGCGGAGCGCGTCGCCGAGGGCATGTGCCAGATGCTT
AGGCGGCGCACCGCGTGCGGGAA-GTGCCAGGTGGCCAT---GCCATCGTCCTCGTCGCGGACGACGCCGGCGCCGGTGG
CG------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>chrUn_955
--------------------------------------------------------------------------------
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-----------------TATAAACGAACCTACTGCTGTCTGCACACACCACACAAAGCACAGCACGAAAAGCACAAGAGA
ACCTGA------------TTCTTCTTCTTCTTCTTCTTCTTTCA---------GATTAACCAGTCCAACAAGAAGAGCCC
GCCGTGGTTTTCTAGGTAA-TAATCCAACTTTCTAAGTT-AGACATGGAGGCGGTGGAACTGGCGGTGGTGGTGAGCTGC
GAGTGCTGCGGCCTGGAGGAGGAGTGCACCGGCGAGTACATCGGCGGCGTGAGGGCCTACTTCGGGGGCCGGTGGCTGTG
CGGGCTGTGCTCCGAGTCCGTCAAGTACGAGGCCGGCTGCAGCAAGCGCAGCGCGGCCATGGGCATGGAGGAGGCCGTGC
GGGCGCACATGGCCTTCTGCCGCATGCTCAGGCGCGGCGGCCCCGCGGAGCGCGTGGCCGAGGGCATGTGCCAGATGCTT
AGGCG---CACCGCGTGCGGGAA-G---CACCGGGCCAC---CTCATCGTCCTCGTCGCGGCGGACAGCGCCGGCGATGG
TGGCGTCAGCGTCCGG---GCACCACCGCGCCTCGGTGCCGTCCGCCTGAGTTGATGTCTGCTTCTTGCGACGAGGTGCA
TGCTTCGGACATACGTCTTCCTCACCACA---------------------------GCTT-------------------A
GATGCATGCCATGTGATAGTACTAGTAT----------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----ATTTTGTTTTGAATCTATTCCGGAAACTATATACAAGTG----ATGGAGTACTGTATGTAGTACGAGGTTAAAGTT
CAATTAATCTTCACATGAGGATCTTGATCTACCCAACGACCGAGCAGCTCTTCTTGGCGTCTATCCTTTCGAGGTGTAAC
AT--------------------------------------TCGATCTGCTTGAAAGTTGTTTCTTCTTTGTTGCGGTTCC
CTGTCCGTCAGAATGATCTTGCACTTGTTCTTCAGA-G---------TGTTTTTCTTTTTTTGTTTCTTTGCGCACTGGC
TTGAGTTTTCGACCCGATCGACGAGACGAGGCCATGGCCGGGCCCGTCGGC------TTCGTCGTCTGTTGCTTTCGCTA
TCCTCGCCCTCAACACACGTGCACAAACATGAGAGGTTGATACTGCTAGTGCATGCTCACCCGTTGGAGAATTTTGTTTA
GATAATGGATGGAAGAAAACTTCTCCCGTGGAGAATCAAATGCGAGTCACCCGAGGATTTGTGTCCACTGCAAGTATGTA
TGATAGACGTAC--CCTGAGTACAAAAGCTCTGGCATGCATCCTAGCTTGACACTTGTTGCCTACCAAGCCAACTGCTTT
TTTGAGAGATACCAATCTAA------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>chrUn_955
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------TATAAACGAACCTACTGCTGTCTGCACACACCACACAAAGCACAGCACGAAAAGCACAAGAGA
ACCTGA------------TTCTTCTTCTTCTTCTTCTTCTTTCA---------GATTAACCAGTCCAACAAGAAGAGCCC
GCCGTGGTTTTCTAGGTAA-TAATCCAACTTTCTAAGTT-AGACATGGAGGCGGTGGAACTGGCGGTGGTGGTGAGCTGC
GAGTGCTGCGGCCTGGAGGAGGAGTGCACCGGCGAGTACATCGGCGGCGTGAGGGCCTACTTCGGGGGCCGGTGGCTGTG
CGGGCTGTGCTCCGAGTCCGTCAAGTACGAGGCCGGCTGCAGCAAGCGCAGCGCGGCCATGGGCATGGAGGAGGCCGTGC
GGGCGCACATGGCCTTCTGCCGCATGCTCAGGCGCGGCGGCCCCGCGGAGCGCGTGGCCGAGGGCATGTGCCAGATGCTT
AGGCG---CACCGCGTGCGGGAA-G---CACCGGGCCAC---CTCATCGTCCTCGTCGCGGCGGACAGCGCCGGCGATGG
TGGCGTCAGCGTCCGG---GCACCACCGCGCCTCGGTGCCGTCCGCCTGAGTTGATGTCTGCTTCTTGCGACGAGGTGCA
TGCTTCGGACATACGTCTTCCTCACCACA---------------------------GCTT-------------------A
GATGCATGCCATGTGATAGTACTAGTAT----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----ATTTTGTTTTGAATCTATTCCGGAAACTATATACAAGTG----ATGGAGTACTGTATGTAGTACGAGGTTAAAGTT
CAATTAATCTTCACATGAGGATCTTGATCTACCCAACGACCGAGCAGCTCTTCTTGGCGTCTATCCTTTCGAGGTGTAAC
AT--------------------------------------TCGATCTGCTTGAAAGTTGTTTCTTCTTTGTTGCGGTTCC
CTGTCCGTCAGAATGATCTTGCACTTGTTCTTCAGA-G---------TGTTTTTCTTTTTTTGTTTCTTTGCGCACTGGC
TTGAGTTTTCGACCCGATCGACGAGACGAGGCCATGGCCGGGCCCGTCGGC------TTCGTCGTCTGTTGCTTTCGCTA
TCCTCGCCCTCAACACACGTGCACAAACATGAGAGGTTGATACTGCTAGTGCATGCTCACCCGTTGGAGAATTTTGTTTA
GATAATGGATGGAAGAAAACTTCTCCCGTGGAGAATCAAATGCGAGTCACCCGAGGATTTGTGTCCACTGCAAGTATGTA
TGATAGACGTAC--CCTGAGTACAAAAGCTCTGGCATGCATCCTAGCTTGACACTTGTTGCCTACCAAGCCAACTGCTTT
TTTGAGAGATACCAATCTAA------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>chr5A_982
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------CACACACA-CACAACACGAAAAGCACAAGAGA
ACCTGA------------TTCCTCTTCTTCTTCCGG-------A---------GATTAAACGGACCAAGAGGAAGAGCCG
GACGTGGTTTTCTAGCTAGCTACTCCAGCTTTCCAAGGT-GGACATGGAGGCGGTGGAGCCGTCGGCGGTGGTGAGCTGC
GTGTGCTGCCGCCTGGAGGAGGAGTGCACCGGCGAGTACGTCGTCGGCGTGAGGGCCTACTTCGGGGGCCGGTGGCTGTG
CGGGCTGTGCTCCGAGTCGGTCAAGTACGAGGCCGGCCGCAGCAAGCGCGCGGCGGCCATGGGAATGGAGGAGGCCGTGC
AGGCGCACATGGCCTTCTGCCGCATGCTCCGGCGCAGCGGCCCCGCGGTGCGCGTCGCCGAGGGCATGTGCCAGATGCTT
AGGCG---CACCGCGTGCGGGAA-G---CACCGGGCCGCCATCTCATCGTCCTCGTCGCGGCGGACGACGCCGGTGCCGG
TGGCGTCAGCGTCTGGACCGCACCACCGCGCGTCGGTGGCGCCGC-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------------------------------
>chr1A_1002
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------AAGCACAAAAGA
ACCATCTTCTTCTTGTTGTTGTTCTTCTTC------------CA---------GATTAACCAGTCCAAGAAGAAGAGCTC
GCCGTGGTTTTCTAGGTAG-TAATCCAACTTTCTAAGTT-AGGCATGGAGGCTGTAGAGCCAGCGGTGGTGGTGAGCTGC
GAGTGCTGCGGCCTCGAGGAGGAGTGCACCGGCGAGTACATCGGCGGCGTGAGGGCCTGCTTCGGGGGCCGGTGGCTGTG
CGGGCTGTGCTCCGAGGCCGTCAAGTACGAGGCCGGCCGCAGCAAGCGCACCGTGGCGATGGGCGTGGAGGAGGCCGTGC
GGGCGCACATGGCCTTCTGCGGCATGTTCAGGCGCGGCGGCCCCGCGGAGCGCGTGGCCGAGGGCATGTGCCGGATGCTT
AGGCG---CACCGCGTGCGAGAA-G---AACCGGACCAC---CTCATCGTCCTCGTCGCGGCCGACAGCGCTGGCGACGG
TGGCGTCAGCGTCCGG---GCACCACCGCGCCTCGGTGCCATCCGCCTGAGTTGATGTCTGCTTCTTGCGACGAGGTG-A
TGCTTCGGACATACGTCTTCCTCGGCACAAGCTAGCTAGC-------TATATATATGCCG-------------------A
TATGCATGTGAT------GTAGTAGTAT----------------------------------------------------
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----ATTTTGTTTTGAATCTGTTCCGGAAACTAT--------------------------------ACGAGGTTAAAGCT
CGATTAATCTTCCCATGAGGATCTTGATCTACCCAACGACCGAGCAGCTGTTCTTGGCCCAAATCCTTTCGAGGTGTAAT
AATATA----------CCGACTGGTGCAGTGCACATTCGATCGATCTGCTTGAATGTT-TTTCCCCTTCGATGCGATTCC
CCGTCCGTCAGAATGATCTTGCACTTGTTCTTCAGAGT---------TTT-----TTTTTTTGTTTCTTTGCGCACCGGC
TTCAGTTTTCTACCTGATCGACTAGACGA-GCCATGACCGACCCCGTCGCC------TTCGCCGTCTGTTGCTTTCGATA
TCCTCGCCCTCAACACACGTGCAGAAACATGAGAGCTTGATACGGCTAGTGCATGCTCACCCG-TGGAGAAATTTGTTTA
GATAAG----GGAAGAAGACTTCTCCCGTCGAGAATGTGA-GCTAGTCACTCAAAGATTTGTGTCCTCTGCAAGTTTGTC
TGATAGACGTACGTCCTGAGTACAAAAGCTCTGGCTTGCATCCTAGCTTGATACTTCCTGGCTACCA-------------
-------------------------------------------------------GAGAAAATGCACACTGCACACATGT
ATACATATTACATACAAAAGCTTTTTGATCGACGTCCAAGTTCGAAGATGAGCGATTTGCTTTAGACGATGATGATATGT
ACACGCACAC----------------------------------------------------------------------
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>chr5B_1325
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-----------------TGCCGCATCTTCAGGCGCGGCGGCCCCGCGGAGCGCGTGGCCGAGGGCATATGCCAGATGCTT
AGGCG---CACCGCATGCGAGAA-G---CAGCTGGCAAC---CTCATCGTCCTCGTCGCGGCAGACAGCCCCGGCCACGG
TGGCGTCAGAGTCCGG---GCACCACCGCACCTCGGTGCCGTCCGCCTGAGTTGATGTCTGCTTCTTGCGACGAGGTG-A
TGCTTCGGACATACGTCTTCCACGCCACAAGCTAGCTAGC-------TA------TGCCT-------------------A
TATGCATGTGATATGTAGTAC-----AT----------------------------------------------------
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----ATTTTGTTTTGAATCTATTCCGGAAAATACACACAAGTGTTTGATGGAG-----TACTATATACGAGGTTAAAGAT
CAATTAATCTTCACATGAGGATCTTGATCTACCCAACGACCGAGCAGCTGTTCTTGGCCCAAATCCTTTCGAGGTGTAAT
AATATA----------CCGACTGGTGCAGTGCACATTCGATCGATCTGCTTGAAAGTTCT----------------TTCC
TCTTCCGTCAGAATGATCTTGCACTTGTTCTTTTGAGT---------TTT-----TTTATTTGTTTCTTTGCGCACCGGC
TTCAGTTTTCGACCCGATCGACGAGACGAGGCCATGGCCGGGCCCGTCGGC------TTCGTCGTATGTTGCTTTCGCTA
TCCTCGCCCTCAACACACGTGCAGAAACATGAGAGGTTGATACTGCTAGTGCATGCTCACCCA-TGGAGAATTTTGTTTA
GATAATGGATGGAAGAAAACTTCTCCCGTGGAGAATCAAATGCGAGTCACCCGAAAATTTGTATCCACTGCAAGTTTGTC
TGATAGACGTACGTCCTGAGTACAAAAGCTCTGGCATGC-----------------------------------------
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>chr5B_1325
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-----------------TGCCGCATCTTCAGGCGCGGCGGCCCCACGGAGCGCGTGGCCGAGGGCATGTGCCAGATGCTT
AGGTG---CACCGCATGCGAGAA-G---CAGCTGGCAAC---CTCATCGTCCTCGTCGCGGCAGACAGCCCCGGCCACGG
TGGCGTCAGAGTCCGG---GCACCACCGCACCTCGGTGCCGTCCGCCTGAGTTGATGTCTGCTTCTTGCGACGAGGTG-A
TGCTTCGGACATACGTCTTCCACGGCACAAGCTAGCTAGC-------TA------TGCCT-------------------A
TATGCATGTGATATGTAGTAC-----AT----------------------------------------------------
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----ATTTTGTTTTGAATCTATTCCGGAAAATACACACAAGTGTTTGATGGAG-----TACTATATACGAGGTTAAAGAT
CAATTAATCTTCACATGAGGATCTTGATCTACCCAACGACCGAGCAGCTGTTCTTGGCCCAAATCCTTTCGAGGTGTAAT
AATATA----------CCGACTGGTGCAGTGCACATTCGATCGATCTGCTTGAAAGTTCT----------------TTCC
TCTTCCGTCAGAATGATCTTGCACTTGTTTTTCTGAGT---------TTT-----TTTATTTGTTTCTTTGCGCACCGGC
TTCAGTTTTCGACCCGATCGACGAGACGAGGCCATGGCCGGGCCCGTCGGC------TTCCTCGTATGTTGCTTTCGCTA
TCCTCGCCCTCAACACACGTGCAGAAACATGAGAGGTTGATACTGTTAGTGCATGCTCACCCA-TGGAGAATTTTGTTTA
GATAATGGATGGAAGAAAACTTCTCCCGTGGAGAATCAAATGCGAGCCACCCGAAAATTTGTATCCACTGCAAGTTTGTC
TGATAGACGTACGTCCTGAGTACAAAAGCTCTGGCATGC-----------------------------------------
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>SNPs
-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------S--------
--------S--------------------------------------------------------S--------------
--------------SSS------------------------------------S--------------------------
---S---------S--S-------------------------------------------S----S-S---------SSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSS----------------S----------S-----------------------S------------
----S---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------S--------------------------
--------------------------------------------------------S----------S------------
--------------S--S---------------------------S--------------------------------S-
-------------S-------------------------------------------------------S--S-------
-----------SSSS-S-S-S-SSS-S-----------------------------------------------------
--------------------S-----------------------------------------------------------
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------S-----------------S-----S-------------------------------------------------
----------------------------SS-S-SS--------------------------S------------------
-----------------------S------------------------------------S-------------------
--------------------------------------------------------------------------------
----------------------S--S-------------------------------------S----------------
------S-------------------------------------------------------------------------
-----------------------------------------S---------------------------S---S------
-----S------------------------------------------------------SS------------------
-S----S---SS--------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------------
----------------S------------S-------------S------SS-------------------------SS-
--SS------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_738
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------CT
CCCTCCGTTCGTGAACAA--------------------------------------------------------------
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>reverse_3502
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-------------------------------------------------------------GGACTGTCGCCACTAACCA
A-------------------------------------------------------------------------------
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------------------------------------------------------
