>input_sequence_71748
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--------------ATGGCAAAGGTGCACCCGAACGTCGCCGCGCCAGAGCTGCCGGCTGGAGGCAGAGCCGTCGTCGAG
GAGGAGCAGCCCACGGTGCTGACGGTGTGGCGCAAGTCTCTGCTCTTCAACTGCGACGGCTTCACCGTCTTTGACGCCGC
CGGCGGCCTCGCCTTCCGCGTCGACCGCTACGGCTCGTCGTCGAGGATCCGGCGCCGCGCCGAGGACGTCGTGCTCATGG
ACGCCGCGGGGAAGCCGCTCCTCACCGTGCGGCGCAAGATCAAGCTGAGCCTGGGTCTGGGGGAGCACTGGGTGGTGTAC
GACGGCGAGGCGAG------CGCCTCAACCGCCAAGCCGCTCCTCTCTGTGCGCCGCCACCACGCCGGCCTCCGCCGCCG
AGCGTCCGACAAGA------------------CGCTCGCGCACGTCACGCCGCTGGGGCCCTCTTCGGCCGGCGCCGACG
CGGCCGCCTACGTCGTGGAGGGGTCGTATGGGCGGCGGAGCTGCGCGGTGCGGGACGCGCGCGGGGGTGCCCCCGTGGCG
GAGGTGCGGCGGAAGGAGTCG---GTGGGGGACGACGTGTTCCGGCTGGTGGTGCCTGACCA---CCGCCTGGGAACGGC
GCTGTCCATGGGCGTCGTCGTCGCCCTCGACCAGATGTTCGGCGCCGCCTCGTCGCGGACGTCGCTCCTGCCCAGGAGCT
GGTCGGCGTAG---------------------------------------------------------------------
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------------------------------------------------------------------
>chr5D_1_TraesCS5D01G147200
ATTCACGAGTTATATCACCAAAACACATTTTTATTTCCCTCAAAACAATACTCCAGTTGATTAAACTATGACTCCCTCTA
GATTAATTATTTTGCGAATTTAATCAGGACATGGAATTTATACGCGCACGT----ACGTGCTATTCGTACATGCATGCGA
TGTTTGAGGACCCTCTTTTTTTACAGAATGTTTGAGGACCCTTGCTTTGGAGGCAAGGTATACAACTTTCATTCCTTGCC
GCAGCATTCCACCATGGACCATATCACTACGACTTTATCTATCTACACTTTGAGGAGATTACAA---AGTGATCAAATTT
AG-CCGGTGCGGTTAGCTATTGCTCAACGAATATGTTCTTTGCACGGCCGCCCAGCCGCCCGCCCGCC--------CGTC
CACGATTTATCCCGATTCCTGGATGCCCC-GCGGTAGCCCGTCATTCATATATCCCATGACATCATCAACAAATCGGAAA
TGTTATATGGTGAAAGATTTGTCGTGTCTTTGATAATACTCCGTCCGTCCCAAAATAAGTGTCTCAACTTTATAAATTTA
GTAGATTTTATAAAGTTGACACACTTATTTTAAG----------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------ACGGATGG
AGTAG-------------------------------TTTCGTTATTTCTATGTCCTTTTTTTTGTTTGTGAAATTCCTTA
TTTCCATGTCGATCAATCAAGAATAATGCTAACG--------TGCAACTGCCGAGACGAA----GAAAGAAAGAAAATGT
CCATTGTTGTCGAGTGACAAAAAGGAGG----------AAAACTCCAATAAACTGAAAAGTAGTCACGCCTAGACAAGAC
ATGCATCCGGTGCTCTACCGTCCACCTCACCTTATTCGGTTATTCATAGCTCAGCCGCCCTCCCGTCCAACCCGACCCTA
GCCGGCCGGTATATATCCCCCTCCCGCCTCCCCGATTCTCCTCATTCTCCACCTCTCCTCCAACCTCCTAACCGCAAGCA
CGCCGGCCAGATCGATCGCGC--------------------------CCCTCTCCGCGAGCCAAGCTAACTATCTACTCG
TACGAGCTAACGGCATGGCAAAGGTGCACCCGAACGTCGCCGCGCCAGAGCTGCCGGCTGGAGGCAGAGCCGTCGTCGAG
GAGGAGCAGCCCACGGTGCTGACGGTGTGGCGCAAGTCTCTGCTCTTCAACTGCGACGGCTTCACCGTCTTTGACGCCGC
CGGCGGCCTCGCCTTCCGCGTCGACCGCTACGGCTCGTCGTCGAGGATCCGGCGCCGCGCCGAGGACGTCGTGCTCATGG
ACGCCGCGGGGAAGCCGCTCCTCACCGTGCGGCGCAAGATCAAGCTGAGCCTGGGTCTGGGGGAGCACTGGGTGGTGTAC
GACGGCGAGGCGAG------CGCCTCAACCGCCAAGCCGCTCCTCTCTGTGCGCCGCCACCACGCCGGCCTCCGCCGCCG
AGCGTCCGACAAGA------------------CGCTCGCGCACGTCACGCCGCTGGGGCCCTCTTCGGCCGGCGCCGACG
CGGCCGCCTACGTCGTGGAGGGGTCGTATGGGCGGCGGAGCTGCGCGGTGCGGGACGCGCGCGGGGGTGCCCCCGTGGCG
GAGGTGCGGCGGAAGGAGTCG---GTGGGGGACGACGTGTTCCGGCTGGTGGTGCCTGACCA---CCGCCTGGGAACGGC
GCTGTCCATGGGCGTCGTCGTCGCCCTCGACCAGATGTTCGGCGCCGCCTCGTCGCGGACGTCGCTCCTGCCCAGGAGCT
GGTCGGCGTAGGAGGAGTACACTGGCCGCGGTAGGAGCCAGCTGGTGAAGCCGCTGACCTGGCGGTCCCACACGGCGACA
AGGTTCTTCGCAAGGGGGAAGCTACTGGCCCCACCTGTCGGCGTGAGCACAGTTTTAGGTGCAGATTGCCCCGCAGAATG
TAGTAGCAAAGCAGAAGAGTAATTCGCATTTAAATTTAGAAAGCAAAGCTACGGAGGCTGGATGCATGCATGCCTTAGGA
ATCGGTGTATATACAGTCAGCCTCTGAAACTTGTGTTCATGGATGATGCTAAAAAATACTATGTACATGGATCTGTAATG
TCAGTGATATACTAAAGTGAGTGCTTGCGTCGCCGATCGTGTAAGGGAATCTTCAACGCCG--ACCCTCAAACCTCCTGC
ATCCTTTCGAACCGCACTTTTTGAACCGCGGAAGCCAACCAACGTGATTCTGTATCAGTTCACGACACGGTTCGAACATA
CTTTCTTCAGTAAACCGTAGACAAACGT-GGGGGGCTTTGCGGGAGTCCGGCCTGCTCTCACGCCTGCTTCCA-ACCACC
CAGGCCCACCCAAAAC-CTCCTCCCTCA----TTCGCGCGTGTTTCTGCCCGGCGCCAGCTGCCCGCATTCATATTGTTG
TAGAGTGCACCGCTCCGCATTGAAGACAGCTTAGGGTGGACGCGAACTCTCACCGCCTCCGCCCTTGAAGCGATGCGCAA
GCCGAAGGCGCCACCCGCGACGCGTCTCCGATGTATGTGCTTGTTCAATGCCGGAGACGCGTGACTGGACGAGATGTGCC
AGATATCTACCATGCATGTTCAACGTC-ATGTCCGTCCGTATGCCGCCATTAAGCAGGCTCGCCGACCGAGAAACCCACT
TCGGC----GTTGCGCATTGACACAC-TGGACGCCTGGCCTCACCGGAATCCGCTATTTAAAGGCGGCCACACCCCGGCT
AACTCTACTCCACAACACAAGCCGCTCCCCATCCTCCTCCCTTGCACTGTGTCCGCCATGACTGCA
>chr5B_30
-----------------------------TTTATTTCCCTCAAAACAA-----CAGTCGATTAAACTATGACTCCCTCTA
GATTAATTATTTAGCGAATTTAATCAGGGAATGGAATCTATACGCGCACGTACGAACGTGCTATTCCTACATGCATGCG-
---------------------------ATGTTTGAGGACCCTTGCTTTGGAGGCAAGGTATACAACTTTCATTCCTTGCC
GCAGCATTCCACTATGGACCATATCACTACGACTTTATCAATCTACACTTTGAGGAGATTACAACAAAGTGATCAAATTT
AG-CCGGTGCGGTTAGTTATTGCTCAACGAATATGTTCTTTGCACGGCCGCCCAGCCGCCCGCCCGCCT----GCCCGTC
CACGATTTATCCTGATTCCCGCATGCCCCCGCGGTAGCCCGTCATTCATATACCCAATGACAGCAACAAATGGGAAAGAT
TAGAAAA-GGAGAGAGACTTGTCGTCTCTTTGATACAGTAGTTTTGTTATTTTCTGAAAAAAAATTCTATGAGACCAGGT
AACGGGTTAGCAGGTGAGACCTATCTTGATGAATGACACGTGACATTCACAAATCATAAAGCATCTACCCCATCCCCACT
TAATATCGGAGGAAGGGGGGAGATTAAATGCTTTGTGATTTGTAAATGACACGTGTCATCCATCAGGACGGGTCTCACCT
ACTCCCTCTGTAAACTAATATAAAAGCGTTTAGATTACTAAAGTAGTGATCTAAACGCTCTTATATTAGTTTACGGAGGG
AGTACTTTATATGAGACCTGGTCTCATATAATTTTTTTCCCTTATTTCCATGTCCTCTG---TGTTTGCGAAATTCCTTA
TTTCCATGTCGATGAATCAAGAATAATGCCAACG--------TGCAACTGCCGAGACGAA----GA---AAAGAAAATGT
CCATTGTTGTCGAGTGACAAAAAGGAGG----------AAAACTCCCATAAACTGAAA-GTAGTAACGCCTAGACAAGAC
ATGCATCCGGTGCTCTACCGTCCACCTCACCTTATTCGGTTATTCATAGCTCAGCCGCCCTCCCGTCCAACCCGACCCTA
GCCGGCCGGTATATATCCCCCTCCCGCCTCCCCGATTCTCCTCATTCTCCACCTCTCCTCCAACCTCCTAAC--------
------------------CGC--------------------------CCCTCTCCGCGAGCCAACCTAACTATCTAC---
---GAGCTAGCGGCATGGCAAAGGTACACCCGAACGTCGCCGCGCCAGAGCTGCTGGCTGGAGGCAGAGCCGTCGTCGAG
GAGCAGCAGCCCACGGTGCTGACGGTGTGGCGCAAGTCTCTGCTCTTCAACTGCGACGGCTTCACCGTCTTCGACTCCGC
CGGCGGCCTCGCCTTCCGCGTCGACCGCTATGGCTCGTCGTCGGGGATCCGGCGCCGCGCCGAGGACGTCGTGCTCATGG
ACGCCGCGGGGAAGCCGCTCCTCACAGTGCGGCGCAAGATCAAGCTGAGCCTGGGCCTGGGGGAGCACTGGGTGGTGTAC
GACGGCGAGGCGA------CCGCCTCAACCGCCAAGCCGCTCCTCTCCGTGCGCCGCCATCACGCCGGCCTCCGCCGCCG
CGCGTCCGACAAGA------------------CGCTCGCGCACGTCACGCCGCTGGGGCCCTCTTCGGCCGGCGCTGACG
CGGCCGCCTACGTCGTGGAGGGGTCGTACGGGCGGCGGAGCTGCGCGGTGCGGGACGTGCGCGGGGGTGCCTCCGTGGCG
GAGGTGCAGCGGAAGGAGTCG---GTGGGGGACGACGTGTTCCGGCTGGTGGTGCCTGATCAT---CGCCTGGGAACGGC
GCTGTCCATGGGCGTCGTCATCGCCCTCGACCAGATGTTCGGCGCCGCCTCGTCGCGGACGTCGCTGCTGAACAGGAGCT
GGTCGGCGTAGGAG---TACACTGGCCGCGGTAGGAGCCAGCTGGTGAAGCCGCTGACCTGGAGGTCCCACACGGCAACA
AGGTTCTTCGCAAGGGGGAAGCTACTGGCCCCACCTGTCGGCGTGAGCACAGTTTTAGGTGCAGATTGCCCCGCAGAATG
TAGTAGCAAAGCAGAAGAGTAATTTGCATTTAAATTTAGAAAACAAAGCTACGGAGC-----TGGATACATGCCTTAGGA
ATCGGTAC--ATACTGTCAGACTCTGCAACTTGTGTTTTTGGGTGATGCT-AAAAATACTATGTACATTGATATATAGTG
TGAGT---------------------------------------------------------------------------
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>chr5A_184
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---------------------------ATGTTTGAGGACCCTTGCTTTGGAGGCAAGGTATACAACTTTCATTCCTTGCC
GCAGCCTTCCACTATGGACCATATCACTACGACTTTATCTATCTACACTTCGAGGAGATTACAACAAAGTGATCAAATTT
AGTCCGGTGCGGTTAGCTGTTGCTCAACGAATATGTTCTTTGCACGGCCGCCCAGCCGCCCGCCCGCCCGGCCGCCCGTC
CACGATTTATCCTGATTCCCTCATGCCCCCGCGGTAGCCCGTCATTCATACATCCAATAACAGCAACAAATGGGAAATAT
TAGAAAA-GGAGAGAGATTTGTCGTCTCTTTGAT----------------------------------------------
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---AG-------------------------------TTTCGTTATTTCCATGTGCTCTG---TGTTTGCGAAATTCCT-A
TTTCCATGTCGACCAATCAAGAATAATGCTAGCATGCTAGCTTGCAACTGCCGAGACGAAAAAAGA---AAAGAAAATGT
CCATTGTTGTCTAGTGACAAAAAGCAGGTCCTCGAGGAAAAACTCTGATAAACTGAAAAGTATTCTCACGTAGACAAGAC
ATGCATCCGGTGCTCTGCCGTCCACCTCACC--------TTATTCCTAGCTCGGCCGCCCTCCCGTCCAAC---------
-CCGGCCGGTATATATCCCCCGCCCGCCTCCCCGATTCTCCTCATTCTCCACCTCTCCTCCAACCTCCTGAC--------
------------------CGCAAGCACGCCGGCCAGCTCGACCGCGCCCCTCTCCGCGAGCCAAGCTAACTATCTAC---
---GAGCTAGCGGCATGGCCAAGGTGCACCCCAACGTCGCCGCGCCAGAGCTGCCGGCTGGAGGCAGGGCCGTCGTCGAG
GAGCAGCAGCCCACGGTGCTGACGGTGTGGCGCAAGTCTCTGCTCTTCAACTGCGACGGCTTCACCGTCTTCGACTCCGC
CGGCGGCCTCGCCTTCCGAGTCGACCGCTACGGCTCCTCGTCGGGGAGCCGACGCCGCGCCGAGGACGTCGTGCTCATGG
ACGCCGCGGGGAAGCCGCTCCTCACCGTGCGGCGCAAGATCAAGCTCGGCCTGGGCCTGGGGGAGCACTGGGTGGTGTAC
GAGGGCGACGCGAGCGCCTCCGCCACCGCCGCGAAGCCGCTCCTCTCCGTGCGCCGTCACCACACCGGCCTCCGCCGCCG
CGCGTCTGACAAGA------------------CGCTCGCGCACGTCACGCCGCTGGGGCCCTCTTCGGCCGGCGCCGACG
CGGCCGCCTACGTCGTGGAGGGGTCGTACGGGCGGCGGAGCTGCGCGGTGCGGGACGCGCGCGGGGGCGCCCCCGTGGCG
GAGGTGCGGCGGAAGGAGTCG---GTGGGGGACGACGTGTTCCGGCTGGTGGTGCCTGACCA---CCGCCTGGGAACGGC
GCTGTCCATGGGCGTCGTCGTCGCCCTCGACCAGATGTTCGGCGCCGCCTCGTCGCGGACGTCGCTGCTGCCCAGGAGCT
GGTCGGCGTAGGAGGAGTACACTGGCCGCGGTAGGAGCCAGCTGGTGAAGCCGCTGACCTGGCGACCCCACACGGCAACA
AGGTTCTTCGCAAGGGGAAAGCTACTGGCCCCACCTGTCGGCGTGAGCACAGTTTTAGGTGCAGATTGCCCCGCAGAATG
TAGTAGCAAAGCAGAAGAGTAATTTTCATTTAAATTTAGAAAACAAGGCTACGGAGGCTGGATGCATGCATGACTTAGGA
ATCGGTGTATATACGGTCAGCCTCTGAAACTTGT--TCATGGATGACGCT-AAAAATACTATGTACATGGATCTGAAATG
TCAGTGATATACTAAAGTGAATGCTTGCGTCACCGATCGTGTAAGGGCATCTTGAACGCCG--ACCCTTAAACCTCATGC
ATCCTTCCAAACTGCACTCTTCAAACCGCGAAAGCCATCCAACGTGATTCTGTATCAATCTACAACACGGTTTGAACGTA
CTTTCTCCCGTAAACAGTAGACAAACAT--GGGAGCTTTGCGGGAGTTCGGCCTGCTCCCACGCCCTCTTCTA-ACCACC
CTAGCCCACCCAAACC-CTCCTTCCTCG----TCAGTGCGTGTTCCCACTTGGCGCCAGCTGTCCGCATCCATGTCGTTG
TAGAGCGCGCCGCTCCACATTGAAGACGGCTCATGGCGGACATGACCTCTCACCGCCTTCGCCCTTGAAGCGGCGCGCAA
GCCGAAGGCGCCGCCCGCGACGCATCTCCGATGTTCGTGCATGTTCAATGCCGGAGACGTGTGACTGTACGAGATGGGAC
AGATATATACCACGCCCGTTCAATGCC-CTGTCTGTCCGTATGCCGCCATTAAGCAGGCTCACCGACCAAGAAACCCACT
CCCAC----GCCGCGCATTGACGCA-CCGAAGGCCTGGCCTCACCGAAATCCGCTATTTGAAGGCGACCACA-CTCGGCT
AAGTCTACTCCACAACACAAGCCACTCCACATCCTCCTCCCTTGCACTACGTCTGCCATGACTGCA
>chr4D_1077
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----------CCATGGCGCTGACGGTGTGGCGCAAGTCGCTGCTCTTCAACTGCGACGGCTTCACCGTCTTCGACGCCAC
CGGCGGCCTCGCCTTCCGCGTGGATTGTTACGGCACGTCCGGTCGCAGGCGCCGCCACGCCGAGGACGTCGTCCTCATGG
ACGCCGCGGGGGTCCCGCTCCTCACCGTGCGGCGTAGAAGGCTCA---------GCCTGGCAGAGCACTGGGTAATCTAC
GACGGCGACGGCGGCGAAGTCGA---CGCCCCGAAGCCGCTCCTCTCCGTGCGCCGCTGCCACGCCGGCTTGCTGCGCCA
CGCCCACGCGTCGTCGTCGTCCAAGCAGAAAGAGCTCGCGCACGTAACGCCTCTCACGCCGGCGTTGCGCGAGTCG----
--------TACGTGGTGGAGGGGTCGTACGCGCGGCGGCGCGTCGCTGTGCGGGACGCGCGCGGGGAGG---CCGTGGTG
GAGGTGCGGCGGAAGGAGTCGCCGGTGGGCGACGAGGTGTTCCGGCTGGTGGTGCCGGACCCTCGCCGCCTTGGCACGCC
GCTGGCCATGGGGATCGTCATGGCGCTCGACGAGATGTTCGGC-------------------------------------
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>chr4B_1077
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----------CCATGGCGCTGACCGTGTGGCGCAAGTCGCTGCTCTTCAACTGCGACGGCTTCACCGTCTTCGACGCCAC
CGGCGGCCTCGCCTTCCGCGTCGACTGTTACGGCACGTCCGGTCGCAGGCGCCGCCACGCGGAGGACGTCGTCCTCATGG
ACGCCGCAGGGTTCCCGCTCCTCACCGTGCGGCGTAGAAGGCTCA---------GCCTGGCAGAGCACTGGGTCATCTAC
GACGGCGACGGTGGCGAAGTCGA---CGCTCCGAAGCCGCTCCTCTCGGTTCGCCGCTGCCACGCCGGCTTGTTGCGCCA
CGCCCACGCGTCGTCGTCGTCCAAGCAGAAAGCGCTCGCGCACGTAACGCCTCTCACGCCGGCGTTGCGCGAGTCG----
--------TACGTGGTGGAGGGGTCGTACGCGCGGCGGTGCGTCGCGGTGCGGGACGCGCGCGGGGAGG---CCGTGGTG
GAGGTGCGGCGGAAGGAGTCGCCGGTGGGCGATGAGGTGTTCCGGCTGGTGGTGCCGGACCCTCGCCGCCTTGGCACGCC
GCTGGCCATGGGGATCGTCATGGCCCTCGACGAGATGTTCGGC-------------------------------------
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>chr5B_1986
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---------------------------------------------------------------------GATATGTAGTG
TGAGTGATATACTAAAGTGAGTGCTTGCGTCGCCGATCGTGTAAGGGCATCTTCAACACCG--ACCCTCAAACCTCCTAG
ATCCTTCCAAACCACACACTCCAAACCGTGGAAGC--TTCAATGCGATTCTGTATCAGTCCACGGCGCGGTCTAAACGTA
CTTTCTCCTATAAACCATAGACAAACCT--GGGAGCTTTGCGTGAGTCAGGCCCGCTCCCACACCCGCTTCTA-GCCACC
CTGGCCCACCCAAACC-CTCCTCCCTCA----TCCACGCGTGTTCCTTCCCGGCGCCAGCTACCCGCATTCATGTCGTTG
TAGAGCGCGCCGCTCCGCATTGAAGACTATTCAGGGCAGACGCAACCTCTCACTGACTCCACCGTTGAAGCGGCACGCAA
GCCGAAGGCACCGTCCGCGACGCGTCTCTGATCTCCGCGCATGTTCAACGCCGGAGGCACGTGACTGGACAAGATGGGAC
AGATATCTACCACGCCAGTTCAGTGCC-ATGTCTGTCTGTATGCCGCCATTAAGCAGGCTCGCCGGCCAAGAAACGGACT
CTAGC----ACCGCGCATTGACGCA-CCGGACGCCTGGCCTCACCGTAATCCGCTATTTAAAGGTGGCCACA-CCCGGCT
AACTCTACTCCACAACACAAACCACTCCCCATCCTCCTCCCTTGCACTGTGTCCGCCATGACTG--
>chr2D_2038
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-----------------------------------------TAAGGGCATCTCTAAGGTGG--ACCCGTAAACCTTCGGC
AACCGTTCGGATCGGACTGTCCGAACCGTAGAAGCCATCCAACGCCGATCTGTACCGGTCCGCGGAGCGGTCCGGACGCG
ATTTCTTCCGCAAATTGGAGAAAAAAATGGGGGAGGTTTGCGGGAGTCTGGATCGATCCCAAGCCCGTTTTCTGTCCGCC
CTGGCCCACCAAAAAC-C-CCTACCCCC----TTCGGGCGCGCTCCCGCCCAGCGCTAGCTGCTCACATTCATGCCGCTG
TAGAGCCCGCCGCTCAGTATTGAAGATGGTTCAGGGCGGACGCAACCTCTCACTGCCTCCGCCATTGAAGCGGCGCGTCG
GCCGAGGGCGCCACCCGAGACGCGTCTCTAGTGTCCGCGCCTGTTCAATGCCGGAGACGCGTGACTGGACGGGATGGGAC
GGATATCTACCGCGCCCATTCAATGCCGCTGTCCGTCCGTCTGCCACCATTAAGTAGGCTCACCGGCCGAGAAACCCACT
CCGGC----GCCGCGCATTGACGCACCCGGACGCCTGGCCTCACCGGAATTCGCTATATAAAGGCGGCCACA-CTCGGCT
AACTCCACACCACAACACCAACCCCTCCACATCCTCCTCCCTTGCATTGCATCTGCCATGACCGC-
>chr6D_2045
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------------------------------------------------ATCTCCAACGCCGATATCCGCAAACCTCCTGC
ATGCATCCGGACCATGCTTTCCGGACAGCGAAAGTCATCCAATGCGGTCCTGTATCGATCTATGGCACGGTCCGGACGTA
CTCTCTCCAGCAAACCGGAGACAAATGT-GGGGGGCTTTGCAGGAGTCCGGACTGCTCTCACGCCCG-CTTCTGATCGTC
CTGGCCCACCCAAACCTCTCCTTCCTCG----CCCGCGTGTGTTCCCACCCGGCACCAGCTGCCCGCATTCATGCCGCTA
TAGAGCGCGCTGCTCCACATTAGAGACGGCTCAAGGCGGAAGCGACCTCTCAGTGTCTCCACCATTGAAGCGGCGCGCCG
GCCGAGGGCGCCGCCGGCGACGCGTCTCC-ATGTCCGCGTTTGTTCAATGCCGGAGACGCGTGACTGGACGAAACAAGAC
GGATATCTACCACGCCCATTCAATGCC-TCATCCGTCCGTATGCTGCCATTAAGCAGGCTCGCCGGCCGAGAAACCCACT
CCAGC----GTCGCGCATTGACGCACCCGGAAGCCTCGCCTCACCGAAATCTGCTATTTGAAGGCGGCCACA-CCTAGCT
AAT-----TCCACAACACAAGCCGTTCCCCAACCTCCTCCCTTGCATTGCATCCGACATGACTGCA
>chr7D_2094
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-------------------TTTGAACCACGGAAGCCATCCAATACCGATCTGTATCAGTCCGCGGGGCGGTCCGGACGTG
ATTTCTCCTACAAATTGGAGACAAACGTGGGGGAGGTTTGCCGGAGTCCGGACAGATCTCAAGGCCG-TTTCTGACCGCC
CTGGCCCACCAAAACC-C-CCTTTCCCAT---CCCACGAGCGCTCCTGCCCGGCGCCAGCTGCCCGCATTCATGCCGCTG
TAGAGCGCACCACTCAACATTGAAGACGCCTCAGAGCCGACACGACATCTCACTGCCTCCGCCATTGAAGCGACGCGCCA
GCCAAGGGCGCTGCCCACGACACGTCTCCGGTGTCTGCGCCTGTTCAAAG-CGGAGACGCGTGACTGGACGAAACGGGAC
AGATATCAACCGCGCTCATTTAATGCCGTTGTCCATCCATCTACCACCATTAAGCAGGCTTTCCAACCAAGAAACCCACT
CCGGC----GGCGCTCATTGACGCACCTGGACGCCTCGCCTCACCGGAATCCACTATATAAAGGCGGACACA-CCCGACT
AACTCCACACCACAACAGTAGCCCCTCCACATCCTCCTCCCTTGCACTACATCTGCCATGACCGC-
>chr1A_2125
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--------------------------------------------------TGTATCGGTTCGTGACGCGGTTCAGACGTA
CTTTCTCGTGCAAATCGGAGACAAACGT-GGAGGGCTTTGCGAGAGCCCGGGCCGCTCCCAAGCCTG-CTTCTGACCGTC
CGGGCCCACCCAACCC-G-CCCTCCTCCCTCGCCCGCGCGCGTTCCCACCCATGGTTAGCTGGCCGCATTCA---TGTTG
TAGAGCGCGCCGCTCCACATTGAAGACGGCTCAGGACGGACGCGACCTCTCACTGCCTCCGCCATTAAAGCGGCGCACTG
GCTGAGGGCGCCGTACATGACGCGTCTCTGGTGTCCGCGCCTGTACAATCCCGGAGACGCGTGACTGGACAGGAC-GGAC
GGATATCTACCACACCCGTTCAATGCC-CCGTCCGTCCGTATGCCTCCATTAAGTAGGTTCGCCAGCCGAGAAACCGGCT
CCGGTCGTGGCCACGCATTGACGCACTCGGACACCTGGCCTCACCGGAATCCACGATTTAAAGGCAGCCACA-TCCGGCT
AACTTCACTCCACAACACAAGCCGCTCCCCATCCTCCTCCCTTGCACTG-----------------
>chr5D_2166
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-----------AAACCGGAGACAAACGTGGGGATGGTTTGCGGGAGTCCGGACCGATCCCACGCCTG-CTTCTGACCGCC
CTGGCCCACCAAAACC-CTCCTCCCCCA----GTCGTGCGCATTCCTGCCCGGCGCCAGCTGCCCGCATTCATGCCGTCG
TAGAGCGCGCTACTCAACATTGAAGACGGCTCAGGGCGGACGCGACCTCTCAGTGCCTCCGCCACTAAATCGGCTCACCG
ACCGAGGGCGCCACCCGCAACGCTTCTCCCGTGTCCGTGCCTGTTCAATGCCGGAGATGCGTGACTGGACGGGACGGGAA
GGATATCTACCACCCCCGTTCAATGTCGTTGTCCATCTACATGCCTCCATTAAGTAGGCTCGCCGGCCGAGAAACCCACT
CCGGC----GCCGCGCATTGACGCACCCGGACGCCTCGCCTCACCGGAATCCCGTATATAAAGGCGGCCACA-CTCGGCT
AACTCCACAGCACAACACAACACCCTACACATCCTCCTCCCTTGCACTGCATCCGCCATGA-----
>chr5D_2166
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-----------AAACCGGAGACAAACGTGGGGGAGGTTTGCGGGAATTCGGACCGATCCCAAGCCTGTTTTCTGACCGCC
CTGGCCCACCAAAAAC-C-CCTCCCCCTT---CC-TCGCACGCTTTCGCCCGGCGCCAGCTGCCCGCATTCATGCCGCTG
TAGAGCACGTCGCTCAACATTGAAGATGGCTCAAGGTGGACACGACCTCTCACTGCCTCCGCCATTGAAGCGACGCGTCA
GCCGAGAGCGCCGCCCGTGACGCGTCTACGGTGTTCGCGCCTGTTCAATGCCGGAGACGCGTGACTGGACGGGACAAGAC
AGATATCTACCGCGACCGTTCAATGCCGTTGTCCGTCTGTCTGCCACCATTTAGCAAGCTCGCTGGCCGAGAAACCCACT
CCGAC----GCCATGCATTGACGCACCCGGACGCTTGGCCTCACCAGAATCCGCTATATAAAGGTGGCCACG-CCCGGCT
AACTCCACACCACAACACCAGGCCCTCCACATCCTCCTCCCTTGCACTACATCCGCCATGACTGC-
>chr3B_2184
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------------------------------GGAGGCTTTGCGGGAGTCCGGACTGATACCACGCCCG-CTTCTGACCGCC
CCGACCCACCAAAACC-C-CACCTCCCTCGC-CC-GCGCACGTTCCCGCCCGGCGCCAACTGCCCGCATTCATGCCGTTG
TAGAGCACACCGCTCGACATTGAAGACGGCTCAGGACGGACGCGACCTCTCACTGCCTTCGCCATTGAAGCGGTGCGCCT
ACCGAGCGCGTCGCCCGCGATGCATCTCTGCTGTCCGCGCATGTTCAATGCCGGAGACACGTGTCTGGATGGGACGGGAC
GGATATCTACCACACCCGTTCAATACTATTGTCCGTCCGTATGCCGCCATTAAGCAGGCTCGCCGACCAAGAAACCCACT
CCGGC----GCCGTGTTTTGACGCACCAGGACACCTCACCTCACCGGAATCTGCTATTTAAATGTGGCCACA-CCCAGCT
AACTCCACACCACGACACAAGCCCCT-CCCATCCTCCTCCCTTGCACTACATCCGCCATGACTGCA
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------SSSSS----S----------------------
------------S---------------SS-------S----------------------------S------------S
SSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------------------------------------
------------S-------------------------------------------------------------------
--------------------------------------------------------------------------------
------------S------S-S---------------------------------S------S--S---SSSSSSSSS-S
-SSS-S-S--S--S-----------S---------SSSSSSSS-SSS-SSSSSSSS--SSSSSSSSSSS-S-S-SSSSSS
SSS-SS--SSS-SSSSS---SS-SS-SSS-S--S----------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------S--
------------------------------------------------S-------S-SSSS------S-----------
------------------------------------------------------------------SSS-----------
----------------------------------------------S---------------------------------
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------------------------------------------------------------------------SSSSSSSS
SSSSSSSSSSSSSSSSSS-----------------------------------------------------------SSS
SSS------S----------------------------------------------------------------------
---S-------------------------------------------------------------------S--------
-------------------------------------------S------------------------------------
-------------------------------------------------------S------------------------
-----------------------------------------------S--------------------------------
S-------------------------------------------------------------------------------
----------------------------S---------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------S-------------
----------------------------------------------------------------------------S---
--------------------------------------------------------------------------------
------------------------S-----------------S-------------------------------------
--------------S-----------------------------------S-----------------------------
-----------------------------------------------S--------------------------------
-------------------------------------S---------------------------------------S--
--------------------------------------------------------------------------------
-S-----------------------------------------------------------------------S------
-----S---------------------S---S-------------S----------------------------------
----------------------------------S-----------------------------------------S-S-
------------S--SS------S--------------------------------------------------------
S----------S----------S-------------------------------------------------S-------
------------------------------------------------------------------
>forward_175
--------------------------------------------------------------------------------
---------------------------------------------------------------------------TGCGA
TGTTTGAGGACCCTC-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
>reverse_2368
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------AATCTTCAACGCCGACCCTC-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
