>input_sequence_71733
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-----------------------------------------------------------------------ATGAAGTCT
CGAAATCTCTACTCCCTTCGTGAGGATCTAAACAAGGCAGCGGTTGCTGTCATCTGGATGCCCCTCTTCTTCTGGATACC
CATCGGTTGCGCCTTCTTCCGCTTGAACGGCCTGCCTCCCAAGTTCTCCGTTCAGGTCACCGAGGCCACGAGTCCCGAGG
CTCCCCGGACGGCGGTTCCAGCCGACCCCATCTCCAG---------TAGTACCGCCTTCAACATCACCCTGCACGCCGTC
AACCGGCGCCCCGCGGACAGGTGCTACCGCCAAGGCGAGGCGGTCGTGCTCTACTCCGGCCTCACCGTCGCGTGGGGCCG
CACGCCGCGCTTCTGCGTGGGCGCGATGGATGCACGGGACGTGACAGTCGTGGCATGGGCCGACGACGGTGTCGAGTTGC
CTACGTTGCTCAGAGACAAGATGGCGGCGGAGCGGCGTGCCGGCTCGGTGGAGCTAGAGGTCGATGTGCGGCTGTTCCGG
GGCGACGACGGCTCGGCCAGACCGACGTGGATGCGGTGCAAGGTGACGACGGGTGGGCCGAAGCTGCCGGACGGGGTTCC
ATGCACCGTGTTCGCTCAGAAGAATTGGGCCTCGGATATTGGCCCGTATTGGATGCAGACGCTTATGGCCTCTGGGTGTA
GTTGGCTCGAAACGGTTGTGCATGGTTTATTCAATCAGTTTGGTTGA---------------------------------
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--------------------
>chr3D_1_TraesCS3D01G249800
CAAAAAATGATTCAACAAATGAGATGGACAGTGCTGCTATGAATCAATTCAGAGCTTGGGTCGCTGATGGGTTGTGGTCC
TTGAAACAACAATGATATGCATAAGTGTTGTTCATTTATGTAATTTCTTTTATCTCGGTTGTTATGTACTATCTCTTATT
TTGGTTCTTATCAACAAGTGTTAATCGTTTGTATGAACAAGTGTTGTTTCGGTTGTCACTATTCTGTAATTCGTTTGTAT
GAAAAAGGGTTATGTGAACAAGTGTTTTATCAACTTATAAGTCCCTGTAAACAAACATGCAGGGACTCGGGACTTATAAG
TCGATGTAAACAAACAAGTAGGGACTTATGACTTATAAGTTGGGACTTAAAAAAGTCCTAGGACTTATTAAACAAACAGG
GCCTTATAAGTCGATGTAAACAAACAGGTAGGGACTTATGACTTATAAGTTGGGACTTAAAAAAGTCCTAGGACTTATTA
AACAAACAGGGCCTGAGTCACTCCTTGTCTGCGGTGGCAGCGGTGGAGCTCAAGAAGACTGCATCTTTTTTATGACCGAG
CGTAGGACGTCCCTCCATAGGAAAGGAAGAGGAAACCTGGAGATGAGTTTCTCGACTGAATCTTG---------TATAAC
ATGAGAGACCGGACAGTGGTGTCGTTGCCATTGGTCATTGGACAACACGGCGGCGGAGCCGGAGCTGTCAGGCGATGATG
GTCCATGGCATCCTA----CTTGGATTTTCCCAGCCGTTATTTGAGT---------------GCAACTGCCACTTCCCTT
TGTAAAACCTCAAACACGG---ATTAGAGTCAACGTATCGATCGAGTACCAACCGTGGCACAAATAGCACAAGAGATATT
TGTTTTTGAACAGAAAAAATGTAGAGAGACGTACCAGCTGGTCAGGTGACGGTTCCCAACAGGACTATCTAGCTAGGTCA
GCCTACATATTCGCAAAACAGGAGCAAAATAGGTCATGCATCACCGAGAAGCCTTGGGCATAAACTGCGCCATGAAGTCT
CGAAATCTCTACTCCCTTCGTGAGGATCTAAACAAGGCAGCGGTTGCTGTCATCTGGATGCCCCTCTTCTTCTGGATACC
CATCGGTTGCGCCTTCTTCCGCTTGAACGGCCTGCCTCCCAAGTTCTCCGTTCAGGTCACCGAGGCCACGAGTCCCGAGG
CTCCCCGGACGGCGGTTCCAGCCGACCCCATCTCCAG---------TAGTACCGCCTTCAACATCACCCTGCACGCCGTC
AACCGGCGCCCCGCGGACAGGTGCTACCGCCAAGGCGAGGCGGTCGTGCTCTACTCCGGCCTCACCGTCGCGTGGGGCCG
CACGCCGCGCTTCTGCGTGGGCGCGATGGATGCACGGGACGTGACAGTCGTGGCATGGGCCGACGACGGTGTCGAGTTGC
CTACGTTGCTCAGAGACAAGATGGCGGCGGAGCGGCGTGCCGGCTCGGTGGAGCTAGAGGTCGATGTGCGGCTGTTCCGG
GGCGACGACGGCTCGGCCAGACCGACGTGGATGCGGTGCAAGGTGACGACGGGTGGGCCGAAGCTGCCGGACGGGGTTCC
ATGCACCGTGTTCGCTCAGAAGAATTGGGCCTCGGATATTGGCCCGTATTGGATGCAGACGCTTATGGCCTCTGGGTGTA
GTTGGCTCGAAACGGTTGTGCATGGTTTATTCAATCAGTTTGGTTGATGATCACTCGTAGATCATGTAGATAATATGTAA
TATTGGGT---------------TCGACTGTT--TGTGACAGTGTTTTCCTTTTATTTGTATTATTATTGAGTACTCGAT
GACTTAAGCTTGACTCATGTTT----------------------------------------------------------
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---------------------------------------------------------------AATAAATTGACTGTGTG
CATCATGTAATGCAGATGACTGACTCCGTTTTCAAGAAAAATAAATGTGATGAGGTTTTTTTAATGGTATGTAATGATGT
TTTTTTAAGGATCAGCCATAGCTGATGTTTGGCTGATAAAAAAACACATCTAGATGTGCTATAGTTATTGCACATTTAAG
TGACTCAATGAAACTAGAAAAAAAAGACAAAAGAAAATGCTTGCGCGAATCTTAGCATAAAATCAATGACATAGGACTTA
GATGTGCAATATTTAGAGCATATCTAGATATGCTTTAGCAAAACTGATTTAAAAAAAGCAGGGAGTTATGATAAAAGTGA
CAAAGATGAGGTCCGAAGATCAAGGAAAGAAGAAGTAAAGGAAAACAAGTTTTTTTTAGCAATGGTAAAAGTGACAACAA
TGGGACCGAAGCAGGGAGCAGTTTTTTTTAATTGTATGCAATGATGTTTTTTT---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------AGCAATGTG
TTTGTTTCAACTATATGCGAGTTGGTGTTGACTGTCGCATGTAGAGTCATGCAGAGGTTATTCATACACTCATTATGTGT
CGTATCTCTTTTATGCTATTG-TTGAGTTTAATAAAAATGCCATTTACTAATAATAAAACGCAATATCTAAATGATGAAT
GTTACAATTTTTTTTGAATTACAGAATGACTCATGC-TCATCGGATTTTCAACACTCGGTTGTGACTTTCTCAAGAAGTG
ACGGTGATGGACCGGCTCAGTTTTTTCTTCCTCTCCTTCTTGC----------CCACCCTGCCGCCGCTCTCATCCTGCC
GCTGGCCTCTCCTCCTCCCGACCTCCATCGGTGCATGACAAGTGGCTATCTGTCCCGCCT----CCAACTCCCACCACAA
CTGAACAG-TTCTCTGCCAC
>chr3A_493
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------CTGAGTCACTCCTTGTCTGCGGTGGCAGCGTTGGAGCTCAAGAAGACTGCATCTTCTTTATGACCGAG
CGTAGGACGTCCCTCCATAGGAAAGGAAGAGGAAACCTGGAGACGAGTTTCTCGACTGAATCTTGTACTAATACTATAAC
ATGAGAGACCGGACAGTGGTGTCGTTGCCATTGG-------ACAACACGGCGG------CGGAGCTGTCAGGCGATGATG
GTCCATGGCATCCGATCGGCTTGGATTTTCCCAGCCGTTATTTGAGTTGCAGATATGTCTGTGCAACTAGCAGTTCGCTT
GTAAACCGCATACATGGATTATATTAGCGTCTACGTATCGATCGGGTAACAACCGTGGCACAAATAGCACAAGACACAAT
GTTTTTTGAACAGAAAAAC--TAGAGAGACGTACCA---GGTCAGGAGACGGTTCCAGCG-GGACTATCTAGCTAGGTCA
GCCTACATATTCGCAAAACAGGGGCAAAATAGGCCATGCATCACCGAGAAGCCTTGGGCATAAACTGCGCCATGAAGTCT
CGAAATCTCTACTCCCTTCGCGAGGATCTAAACAAGGCAGCGGTTGCTGTAATCTGGATGCCCCTCTTCTTCTGGATACC
CATCGGCTGCGCGTTCTTCCGCTTGAACGGCCTGCCTCCCAAGTTCTCCCTTCAGGTCACCGACGCCACGAGTCCCGAAG
CTCCCCAGACGGCGGTTCCGGCCGACCCCGTCTCCAG---------CAGCACCGCCTTCAACCTCACCCTGCATGCCGTC
AACCGGCGCCCCGGGGACAGGTGCTACCGCCACGGCGAGGCGGCTGTGCTCTACTCCGGCCTCACCGTCGCGTGGGGCCG
CACGCCGCGCTTCTGCGTGGGCGCGATGGATGCACGGGACGTGACCGTCGTGGCGTGGGCCGACGACGGCGTCGAGCTGC
CTACGTTGCTCAGAGACAAGATGGCGGCGGAGCGGCGTGCCGGCTCGGTGGAGCTCGAGGTCGATGTGCGGCTGTTCCGG
GGCGACGACGGCTCGGCCAGACCCACGTGGATGCGGTGCAAGGTGACGACGGGTGGGCCGAAGCCGCCGGACGGGGTTCC
ATGCACCGTGTTCGCTCAGAAGAACTGGGCCTCGGATATCGGCCCGTATTGGATGCAGACGCTTATGGCCTCTGGGTGTA
GTCGGCTCGAAACGATTGTGCATGATTTATTCAATCAGTTTGGTTGATGAT---TCGTAGATCATGTGGATCATATGTAA
TGTGGGTT---------------TTCACTGTCTGTGTGATCGTGTCTCTTTTTTATTTGTATTATTGTCTAGTACTCGAT
AACTTAAACTTGATTCATGTTT----------------------------------------------------------
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---------------------------------------------------------------AATAAATTGACTGTGTG
GGCCCTGTGATGCAGATGCCGGACTCCGTTTTCAAGAAAAATGAATGTAATTAT--------------------------
--------------------------------------------------------------------------------
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--------------------GTTTTTTTTAATTGTATGCAATGATGTTTTT-----------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------AGCAATGTG
TTTGCTTCAACTGTATGCG-----------------------AGAGTCATGCAGAGGTCACTCATACACTCATTATGTGT
CGTATGTCTTTGATGCTATTGTTTGAGTTTAAT-AAAATGTCATTTACTAATAATAAA---CACTATTTAAATGGCGAAT
GTTACATTTTTCTTCAAACTGCAGAATGACTCGTGTGTCATCGGATTTTCAACACTCGGTTGTGACTTTCTTAAGAAGTG
ATGGTGATGGACCGGCTCAGTTTTTTCTTCCTCTCCTTCTTGCTCGCTCTCGCCCCCCA--CCGCCGCTCTCATCCTGCC
GCTGACCCCTCCTCTTCCCGACCTCCATTGGTGTAGGACAA---GCTATCTGTCCCGCCT----CCAACTCCCACCACAA
CTGAACCAATTCTCTGCCA-
>chr3B_631
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------C
ATGAGAGACCAGATAGTGGTGTCGTTGCCATTGT-------ACAACACGGCGG------CGGAGGTGTCAGGCGATGATG
GTCCATGGCATCCGA----CTTGGATTTTCCCAGCCGTTATTTGAGT---------------GCAACTACCACTTCCCTT
TGTAAAACCTCACACACGG---ATTAGAGTCCACGTATCGATCGAGTAACAACCGTGGCACAAATAGCACAAGAGATAC-
TGTTTTGGAACAGAAAAAACGTAGAGAGACGTACCAGCTGGTCAGGTGACGGTTCCCAACAGGACTATCTAGCTAGGTCA
GCCTACATATTCGCAAAACAGAAGCAAAATAGGTCATGCATCACCGAGAAGCCTTGGGCATAAACTGCGCCATGAAGTCT
CGAAATCTCTACTCCCTTCGTGAGGATCTAAATAAGGCAGCGGTTGCTGTCATCTGGATGCCCCTCTTCTTCTGGATACC
CATCGGTTGCGCCTTTTTCCGCTTGAACGGCCTGCCTCCCAAATTCTCCGTTCAGGTCACCGAGGCCAGGAGTCCCGAAG
CTCCCCGGACGGCGGTTCCAGCCGACCCCATCTCCAG---------TAGTACCGCCTTCAACATCACACTGCACGCCGTC
AACCGGCGCCCCGGTGACAGGTGCTACCGCCACGGCGAGGCGGTCGTGCTCTACTCCGGCCTCACCGTCGCGTGGGGCCG
CACGCCGCGCTTCTGCGTGGGCGCGATGGATGCACGGGACGTGACCGTCGTGGCGTGGGCCGACGACGGCGTCGAGCTGC
CTACGTTGCTCAGAGACAAGATGGCGGCGGAGCGGCGCGCCGGCTCGGTGGAGCTCGAGGTCGATGTGCGGCTGTTCCGG
GGCGACGACGGCTCGGCCAGACCGACGTGGATGCAGTGCAAGGTGACGACGGGTGGGCAGAAGCTGCCGGACGGGGTTCC
ATGCACCGTGTTCGCTCAGAAGAATTGGGCCTCGGATATTGGTCCGTATTGGACGCAGACGCTTATGGCCTCTGGGTGTA
GTTGGCTCGAAACGATTGTGCATGGTTTATTCAATCAGTTTGGTTGATGATCACTAGTAGATCATGTGGATAATATGTAA
TATTGGGTGTAGTAGGGTTGTGTTCGTCTGTT--TGTGACCGTGTTTTTCTTTTATTTGTATTATTG---AGTACTCGAT
GACTTAGTGCCCGTTCAGAGGCCCTCCGCTCCACAACTCTGCCACGGAGCGGAGCAGGCTGCAGTTCAAATTTTCAGAGT
GGTGGAATAGGTGCTCCGCCAGATTCGTGGAGCTGGTGGATTACCAAACAGGCCTCAAAGATGAAGATGCCAACACTTTC
TTCTTTCACCTCCGGGTCAATCATAGAAGGCGAAAGAATTTCATCCACCGTCTTAAGCACAATAATGGTTGGGTCACCGA
CCATGAGCACAAGAAGTCCATCATTCAAAACCACTTCAGGGAAGTCGCCAAGAGGGGTGTGCCTCGTACCATTGACATCA
ATTAGGATAATATTCCTGTCCCTGCTTGCGATCTCTCAGACCTTGGGGCTGCCTTCTCGGAGGAGGAGGTCAAGAAGGCA
ATCTTCGATCTACCAAGTGACAAAGCTCCGGGACTGGACGGCTTCACCGGTGCCTTCTTCAAGGAATGTTGGGAGATCAT
CAAAGGAGACATTATGAATGCGGTCAACCACTTCTCGAGCTTGCACACCTCCAACATCCATTGGCTCAACTCAGCGAACA
TTGCCCTCATTCCTAAGAAAGATGGGGCGGAGTACATCTTCGATTTCCGTCCCATTAGTCTTATCCATGCAATTGCGAAG
ATTATAGCTAAGATGATGGCCTCACGTCTCGCACCGCACATGCAAAGTCTTGTCTCAAATGCTCAAAGCGCTTTTATCAA
GAAGAGGAGCATACATGTTAATTTCATGTATGTGAGAGGCTTGGCGAGAAAGTTGCATCGCAACAAGACCCCGACTTTGC
TCTTCAAGCTCGATATCAAGAAAGCTTTCGACTTTGTGAGATGGGATTTCCTTTTGGATCTTTTAAGGCATCTGGGCTTC
CCAAGCAAATTTCGCGACCGGGTTTCAGCCCTCCTTTCCACGGCTTCGTCGAGGGTTTTGATCAATGGTGTGTTGGGTGA
TCTGTTGAAGCATGGTCGTGGCCTCAGGCAAGGCAATCCACTGTCACCCCTGCTGTTCGTTTTGGCGATTGATCCTCTAC
ACCATCTTCTCAACAAAGCCACGACCCAAGGGCACCTCCATCCTCTCTGTCGTAGAGCCATGACAATCCGTGCTTCGCTC
TATGCGGACGATGCTGCCATCTTTATCAAGCCCATCAAAGAGGATGTTCAATTCCTTGCTTCCTCTCTGGCCTCCTTTGG
AGATATTACCGGTTTAGTCACCAATTGTGCCAAAAGCCTCGTGTCCCCTATTCGATGCGAAAACGTTGACCTTGATGATA
TTCTACTTGCTTTCCCGGTTGTCCGTTCTTCGTTTCCGATGAGATACTTTGGACTCCCACTGTCCGTCAAGTGTCTCAAG
AGGATCCATTTTCAACACCTTGAGGATAGAATCGCGGGCAAGCTCCCTCCTTGGCAGGGAAGACATGTTGCTACTGTTGG
CCGGGTTGTTCTAGTCAAAGTTTTCCTCACTGCCATTGCCATTTACCATATTACGCCTCTTGATATCCCGGTGGAGGTTC
TCAAGAAGATTGACCGTATTCGTCGCGCCTATCTTTGGGCAGGAGCCGACAAGGTTTCCGGTGGGAAATGCAAAGTTAAT
TGGGACCTTGTTTGCAAGCCTAAGAAACATGGTGGCCTGGGTGTGCTCAATTTGGACAAAATTTCCAAAGCTCTTAGGCT
TCGTTAGCTCTGGTTTGAATGGAAAGAGCCCACAAAACCATGGATTGGTATGGGCACGCCATGTACGGACAAGGACAAAG
ATTTGTTTGCGGCTGCCACTACAGTCACGGTTGGCAATGGGCGTACGACCAGATTTTGGAACTCCTCTTGGCTGAATGGT
TTGCGCCCGCGTGATATTGCACCTCACATCTTTGAGCTATCCGAAAAGAAAAACTGCTCGGTCCAACAAGCTTTAACAAA
CAACACTTGGATCTCTCACATCGACATCTCCAATGGCCTAACCATCAACCATGTTCAACAGTTTGCCAATCTTTGGGAAA
ATGTTGCTCAGGTCACACTTGCTGAGGATATGGAGGATTCCATTATCTGGAAGACCAAGGATGGTTTGTACTCTGGCTCC
TCGGCTTATAAGGCGCAATTTGAAGGCCTTACTACGTCGGACATGGTTCAGTCGGTGTGGAAGGTGTGGGCTCCTCCGCG
GTGCAAATTTTTTGCTTGGCTTGCCCTTCAAAACAGGATTTGGACATCAGATCGCCTTCTTCGTCGTGGATGGCCCAACT
GCGGTCTTTGCCCCCTTTACAAGCAAAGTAAGGAATCGGCGGCCGACCTACTGTTCCAATGTCGTTTCACCCTTTGTGTG
TGGAATGATATTATCTAGTGGCTCGGCTTGCATCGCATCAATACCGCTGCTTGGACGAAGAGGGTCTCGGTGAGGGAATG
GTGGACAGGAAACATTCATATCCGTAGCGAATCCCCCAAGGCGCTTGCTTCACTGATGATGCTCATCTCCTGGGAGATTT
GATCGGAGCGCAATGCTAGAATTTTCCACAACACGGCCGCTCCTTTAGTGGTCCTTGTTAGCAAGATTAAAGAGGAGTTG
TCTCTTTGGGCTTTGGCGGGCGCCAAGCACTTGAGTATTGTAATGGCGCGAGAGTAGGCCTTTATTTTCTTGCCGCTTTG
TGGTATTGTCTAAACCTTCTTCCTTAATCAATAAAATGGCAAATCTTTTGCCTTGTTTAAAAAAACAATTTGACTGTGTG
CATCATGTGATGCAGATGACTAACTCTGTTTTCAAGAAAAATAAATGTGATGAG--------------------------
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--------------------GTTTTTTTTAATTGTATGCAATGATGTTTTTTTAAAGCACATCTGAATGTGTTATAGTTA
TTGCACATCTAAGTGACTCGATGAAACTAGAAAGAAAGAAAAAAAGACAAAAGAAAATGCTTGCACGAATCTTAGCGTAA
AATCAATGACACGTGATATAGATGTGCAATATTTAGAGCATATCTAGATGTGCTTTAGCAAAACTGATTAGAAAAGCAGG
GAGATATGGTAAAAGTGACAAAGATGAGGACCGAAGATCAAGGAAAGAAGAAGAAGAAAAGGAAAACAAGTTTTTTTAGC
AATGGTAAAAGTAACAAGGATGGAACCGAAGCATGGAGCAGTTTTTTTAATTGTATGCAATGATGTTGTTTAGCAATGCG
TTTGTTTCA-CTATATGCAAGTTGGTGTTGATTGTCGCATGTAGAGTCATGCAGAGGTTACTCATACACTCATTACGTGT
CGTATCTCTTTGATACTATTA-TCGAGTTTAATAAAAATGCCATTTACTAA----AAAACGCAATATCTAAATGATGAAT
GTTACTTTGTTTTT--AACTACAAAATAACTCGTGTGTCGCCGGATTTTCGACACTCGGTTGTGACTTTCTCGAGAAGTG
GGC--GATGGGCCGGCTCGGTTTTTTCTTCCTCTCCTTCTTGCTCGCTCTCGCCCACCCTGCCGCCGCTCTCATCCTGCC
GCTGACCCCTCCTCTTCCCGACCTCAATCGGTGCAGGACAATTAGCTATCTGTCCCGCCTTGAACCAACTCCCACCACAA
CTGAACAG-TTCTCTGCCAC
>chr3D_995
--------------------------------------------------------------------------------
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-----------------------------------------------------------------TGCGCCATGAAGGTT
CGAAATCTGTATTCCCTTCGCGAGGATCTAAACAGGGCAGCGGTTGTTGTCCTGTGGATACCCCTCTTATTCTGGATACC
CCTCGGTTGCATGGTTTTCCGCGTGAACGGCCTGCCTCCCAAATTCTCCGTTCAGGTCAGCGAGGCCAGGAGTCCCGAGG
TTCCCCGCGCGGCGGTCCCAGCCGACCCCGTCTCCACTACCACTACCAGTACCGCCTTCAACATTACCCTGCACGCCGTC
AACCGGCGCCCCGCGGACAGGTGCTACCGCCAAGGCGAGGCGGTTGTGCTCTACTCCGGCCTCACCGTCGCGTGGGGCCG
CACGCCGCGCTTCTGCGTGGGCGCGATGCATACACGGGACGTGACGGTCGTGGCATGGGCCGACGACGGTGTCCAGTTGC
CTACCTTGCTCAGAGACCAGATGGCGATGGAGCGGCGTGCTGGCTCGGTGGAGCTCGATGTCGATCTGAGGCTGTTCCGG
AGCGATGACGGCTCGGCCAGACCAACGTGGATGCGGTGCAAGGTGACGACGGGTGGACCCAAGCAGATGGACGGAGTTCC
ATGCACAGTATTCGCTCTGCAGAATTGGGCCTCGGATGTTGCCCCGTGTTGGATGCAG----------------------
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>chr3B_995
--------------------------------------------------------------------------------
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-----------------------------------------------------------------TGCGCCATGAAGGTT
CGAAATCTTTATTCCCTTCGCGAGGATCTAAACAGGGCAGCGGTCGTTGTCCTGTGGATACCCCTCTTATTCTGGATACC
ACTCGGTTGCGTGGTTTTCCGCGTGAACGGCCTGCCTCCCAGATTCTCCGTTCAGGTCACCGAGGCCAGGAGTCACGAGG
CTCCCCGCGCGGCGGTCCCAGCCGATCCCGTCTCCACTACCG------GTACCGCCTTCAACATTACCCTGCACGCCGTC
AACCGGCGCCCCGCGGACAGGTGCTACCGCCATGGCGAGGCGGTTGTGCTCTACTCCGGCCTCACCATCGCGTGGGGCCG
CACGCCGCGCTTCTGCGTGGGCGCGAAGGATACACGGGACGTGACGGTCGTGGCATGGGCCGACGACGGTGTCCAGTTGC
CTACCTTGCTCAGAGACCAGATGGCGGTGGAGCGGCGTGCTGGCTCGATGGAGCTCGATGTCGATCTGAGGCTGTTCCGG
AGCGATGACGGCTCGGCCAGACCAACGTGGATGCGGTGCAAGGTCACGACGGGTGGACCCAAGCAGACGGATGGAGTTCC
ATGCACCGTATTCGCTCTGCAGAACTGGGCCTCGGATGTTGCCCCGTCTTGGATGCAG----------------------
--------------------------------------------------------------------------------
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--------------------
>chr3A_1080
--------------------------------------------------------------------------------
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----------------------------------------------------------------------TCTGGATACC
CCTCGGTTGCGTGGTTTTCCGCCTGAACGGCCTGCCTCCCAAATTCTCCGTTCAGGTCACCGAGGCCAGGAGTCCCGAGG
CGCCCCGCGCGGCGGTTCCAGCCGATCCCGTCTCCACTACCG------GTACCGCCTTCAACATTACCCTGCACGCCGTC
AACCGGCGCCCCGCCGACAGGTGCTACCGCCAAGGCGAGGCGGTTGTGCTCTACTCCGGCCTCACCGTCGCGTGGGGCCG
CACGCCGCGCTTCTGCATGGGCGCGATGGATACACGGGGCGTGA--GTCGTGGCATGGGCCGACGACGGTGTCCAGTTGC
CTGCCTTGCTCAGAGACCAGATGGCGGTGGAGCGGCGTGCTGGCTCGGTGGAGCTCCATGTCGATCTGAGGCTGCTCCGG
AGCGATGACGGCTCGGCCAGACCAACGTGGATGCGGTGCAAGGTGACAACGGGTGGACCCAAGCAAACGGACGGAGTTCC
ATGCATAGTATTCGCTCTGCAGAATTGGGCCTCAGATGTTGCCCCGTCTTGGATGCAG----------------------
--------------------------------------------------------------------------------
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--------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSS------------------------------S------------------------S------------
-------------------------------------------S------------------------------------
----------------------------------SSSSSSS------------SSSSSS---------------------
-------------S------------------------------------------------------S-----------
------------S------------------S----------------S-----------------------------S-
-------------------S------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------S----------------------------------
-------------------------------------------------------S------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------S----------------------------------------------------S------------
----------------------------------------S-------S-----------------S-SS----------
-------S-----S------------------------------------------------------------------
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--------S---------------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSS------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------S----------------------------S-------------------
-----------S--------------------------------------------------------------------
------S-------SS--S-------------S--S--------------------------------------------
-S------------------------------------------------------------------------------
----S--S------S--------------------S-----S-S------------------------------------
--------------------
>forward_82
--------------------------------------------------------------GCTGATGGGTTGTGGTCC
TT------------------------------------------------------------------------------
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>reverse_4569
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--------AATGCAGATGACTGACTCCGT---------------------------------------------------
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--------------------
