>input_sequence_71731
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------------------ATGGC---TACTGCCAGCTGCTGGTTTTTGGTGTTCGTCTGGGTAGTA---TGGTGGCTGCC
ACCGACGCTCGC---CGGGCCTGAGGAGCAGCA---AGGAGAAGGCTGCT------CGAGCTTGGCCAAGACGTGCGGCA
ACCTCACTATCTCCCGCCCGTTTTGGATCGCCAGCAGGGAGGCGGGAAGATCGTGTGGTCCCTTGGACTTCCAGGTCGGT
TGCTCAAACAACAACATTTCATTTCTCCGGAGCTCTGGATTCACTGGGTCCACTGGCTTTGCGATCATGAACATCTCGTA
CGATGATCGCAATCTGCGTATCGTTGATGTACACAAAGAGGAAGCCTTCAACGTCACC---AAC---GGCAC--------
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-----------------CTGCAATTTCCCGAGTTGGAACACCTCCAGCAAGCTGGCAGTGCCGTTTAAGGTCAACCCCGC
CAACCTGAACATCAT-CTTGTACAAGTGCACAAAGAG---------------GGTGGCGCTGGTGGAGGTGAGATGCGCG
AACGCGAGCAACGTGTTTGTTCGCACGGGAGTGCGTTTCGAT--GAGACTGGGAACTATGGCGGCTACGCCTTGGAGGGC
TGTGATGCTATCGTCGTGCCGGTGATGGGCTCGGCG---------AATGCAAGCAACTTCGAACAGCTCATCA--GCGAT
GGCTTCCTCCTGACATGGGATCCACCCC------------CTGCACGTAAGTTCA----CCTGTCGAATCATC-TTTTAA
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>chr3D_1_TraesCS3D01G045100
ACCGATTTAGATATTTAGTAATTTTTGACAATAACATCTTCTTTTCAAGTTCAAACCAAGGGATCCACGGAAACGGGTCC
TTCAACTCGAAGAAATGATAATATCCCTCGCATTACA--GCCCAACTCAAGCCCGGTGATATTGATTATTGATCTAATGA
TCATCGCGTCTAGTTGGAATATATTCTCTCCATCCCACAATATAAGAGCGTCTTGTACACTACACTAGCGTCAAACAACT
GGGACGGAGGGAGTAGCGCGCTATTTTTTTCATTG---------------------------------------------
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----------GTAACACCACCGTGAGACGCACCCTCGGTTTACTCCCCTTAACTCTGGAAAGGCTGCGACGTTGCCAGCC
CATAACAGGTGCACTCCGTGCATGACCTTGCCTGAGATGGAGAATCGTTTTTCTTTTCCCTGTAAAATGTGATCTCTGTA
CAAACCTATCCCGACCCAAGAATCCATGAACAAGACGTACTTGAAAGACAA-GTACGTGAATATGTATGTTTGGTCGACG
ATAAATCT-----CCGTCTGGACTAAAATTTACACGG-------------------------------------------
-------------------------------------------------------------------AGTTTTCAAAATG
CACAACCCAGTAACCTGACAAATGATCATCTTTTTCGTCGGATACTGACATAGTATTACCTGTCAAGTCTGAATGTTGTA
TAAATATTAGAATCTGGC-----AT-----CTAAAACTTTCTCGATG--------AAGGAATCTTGTATT--TAGATAGC
TGACAAAAGGATGGAGTATCCGGTATGGAAACAAACAG-CCTATAAGCATCCAGGTTCATGTCACATCGCGGGCACACAG
AGGTCATGTTGATGGCTTACCCGTCAATG--GTGTTAGGATTAGAGATTCAGAAACCATGGCCTACAAGTCCAAGCGGTG
GTTGAGGGAATTCGTGGATGACGATTGCTTA-GCCCCGATTTTCCAGTCATTTGTTCGTACCACCGTAGGATT-------
------CGTCCACATATATCCTTCTTTAACCATGATATC----CTCTCATACACAT----TTCTCCACCACCCCACGGCC
AAATCTTCTTCTATTCCTATGGC---TACTGCCAGCTGCTGGTTTTTGGTGTTCGTCTGGGTAGTA---TGGTGGCTGCC
ACCGACGCTCGC---CGGGCCTGAGGAGCAGCA---AGGAGAAGGCTGCT------CGAGCTTGGCCAAGACGTGCGGCA
ACCTCACTATCTCCCGCCCGTTTTGGATCGCCAGCAGGGAGGCGGGAAGATCGTGTGGTCCCTTGGACTTCCAGGTCGGT
TGCTCAAACAACAACATTTCATTTCTCCGGAGCTCTGGATTCACTGGGTCCACTGGCTTTGCGATCATGAACATCTCGTA
CGATGATCGCAATCTGCGTATCGTTGATGTACACAAAGAGGAAGCCTTCAACGTCACC---AAC---GGCAC--------
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-----------------CTGCAATTTCCCGAGTTGGAACACCTCCAGCAAGCTGGCAGTGCCGTTTAAGGTCAACCCCGC
CAACCTGAACATCAT-CTTGTACAAGTGCACAAAGAG---------------GGTGGCGCTGGTGGAGGTGAGATGCGCG
AACGCGAGCAACGTGTTTGTTCGCACGGGAGTGCGTTTCGAT--GAGACTGGGAACTATGGCGGCTACGCCTTGGAGGGC
TGTGATGCTATCGTCGTGCCGGTGATGGGCTCGGCG---------AATGCAAGCAACTTCGAACAGCTCATCA--GCGAT
GGCTTCCTCCTGACATGGGATCCACCCC------------CTGCACGTAAGTTCA----CCTGTCGAATCATC-TTTTAA
TCAA-GTTCGTACCTAAGCTA---GGACGTGGGGTGCCTAAGTAACTTTCATGGATTCCCATAATCGTTGGAACAATCAA
ACATGTTACTACTCACTAACCGAGGATTATGATGAAGTTGTTAGTTTTC-TTCTTCTTATTCCTACATTTTAGAAATCCA
GTGAATCAAACAGGCCCTAGTTAGTCTGAATTGAACTCCTGAAGTTGGCCATATATACAGCCTAAATTGGCATCACGCAC
TTGTTCGGTAATCCAATCAGAGTCCAGTCACACTTTCAGTTCTTTT---------TTTTTAGACAAAGTCACACTTTCAG
CTTCAGACAACATATT-AGTTATTTGGAACTTTTGGATTGTTGGATTGGGAGTGGCTACAAGACAGTGGACTGAAGAAAA
TTTAAAGGGTCAGTCGATTTCTAACATTCTATTTCAACCGTTGGATCAAGATCCAACGTCCACAACTTCATCTTCAACCT
GTGAGCATGCACTGTTTCTCTTCAACCTCAAATCTGACCCCA-AGCCGCCAGCTACCACCAGCCTAACCACTGCCACCTG
CCCCCCGCGGCCGGCGGCGCTCCAGCGATCGCCTCACCGCGCCGTCCTCCCCTGAACCGCCCCACTGCCGGTCTTGCTGC
CGCCCCGGTCATCCCTCTAGCCTCGCCCCGTCCAGTTTTTTCTCCGGAGAAGCCCCACCACCGCCGTCCACCTCCGCCCC
CACCTAAGATAGATAATGGGGGTGATGACGGCGAGCCCCTTCCTTCTCTCCAGGGAGGCCCTTCC----------TTCAC
TCAGAATTGACTGACCCGGATTCGAAATTCAGCCGACTGACATGTAGCTAATATGGGTTGGATTACGGTGCGTTGGCCCC
CAACAGTGGAATTCTGTCTGGCGTAGCGGAGTCCTTAAGCGTCAAATAGGTGGACAAACGACCATGTGCAGCTATTTGGG
CCAGCTGTTGCCACAACCCATGTTAGCCCGTGTCTTTGTTTTTGTGAAAAATGTATTTTGCTTAAT
>chr3A_27
--------------------------GACAATAACATTTTCTTTTTAAGTTCAAACCAAGGGATCCACGGAAACGAGTCC
TTCAACTCGAACAACTGATAATATCACTCGTATT--A--GTCCAACTCAAGCCCAGTGATATTGATTATTGGTACAATGA
GCATCGCGTCTAGTTGGAATATAACATTGA---AAAAAAAGCAGCATTTTGCTTTTATTGTTTTCTGTTTAAGCAACCAA
GAGCTGAAAACATACCTTGAAACTGGGTTTTCGGCCCTTTGTTTTTCACCCTGGTCATCAGCCCATCCTGGCTCCGCCAT
TGGCTGAGATGCAACATGCCACTGTCTCCCCTTCTCCATCTCATCTCGTTTTGTTCTCGTGCTCGTTGGCAAGCGACCTC
CCGCATAATGTAGTATTTCTGTCAGGCACCGTTGATCTATATGCTCCAACCAACTCCAGCGAGGTTACTCGCTGCTAATC
TGTGTGTCCTGTAACATCACCGTGAGACGCACCCTTGGTTTACTCCCCTCAATTCTGAGAAGGCTGCGATGCTGCCAGCC
CATATCAGGCGCACTCCGTGCATGGCCTCGCCTGAGATGGAGGGTAGTTTTTGTTTTCCCTGAAAAATGTGATCTTTACA
CA--CCTATCATGATCCAGGAATCCATGAACAAGATGTACTTGAAAGACAAAGTACGTGAATATGTGATCTTTAC-----
-------------------------------ACACAT-------------------------------------------
-------------------------------------------------------------------ATTCTTTAACTTG
CACAAACCAATAACCCAATAAATGATCTTCTTTTTCATCGGATACTGA----------------AAGTCTGAATGTTGTA
CAGATATTAGAATCTGGT-----ATTTTATCTAAATTTTCCTTGATAAAGGGTCAAAGGGATCTTGTATT--TAGATAGC
TGACAAAAGCATGAG-TAGCTGGTATGGAAACAAACAG-CCTATAAGCATCCAGGTTCATGTCACATCGCGGGCACACAG
AGGTCATGTTGATGGCTTACCCGTCAATGGTGTGTTAGGATTAGAAATTCAGAAACCATGGCCTACAAGTCCAAGCGGTG
GTTGAGGGAATTCGTGGATGACGATAGCTTA-GCCCCGATTTTCCAGTCACTCGTTCGTACCACCATAGGATC-------
------CGTCCACATATATCTTTCTTCAACCACGATATC----CTCTCATACACAT----TTCTCCACCGCCCCACGGCC
AAATCTT--TCTGCTCCTATGGC---TACTACCAGCTGCTGGTTCTTGGTGTTCGTCTGGGTAGTAGCATGGGAGATGCC
ACTGACGGTCGC---TGGTGCTGAGGAGCAGGA---AGGGGAAGGCTGCT------CGAGCTCTGCCAAGACGTGCGGCA
ACCTCACCATCTCCCACCCGTTCTGGCTCGCTGACAGGGAGGCGGGAAGATCGTGTGGTCCCTTAGATTTTGAGGTCAGT
TGCTCAAACAACAACATTTCATTTCTCCGGAGCTCTGGATTCACTGGCTT---------TGCGATCATGGACATCTCGTA
CGAGGACCGCAATTTGCGTGTCATTGATGTACACAAAGAAGAAGACTTCAACGTCACC---AAC---GGCAC--------
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-----------------CTGCAATTTCCCCAATTGGAACACCTCCAGCAAGCTGGCAGTGCCGTTTAAGGTCAACCCTGC
CAACCTGAACATCAT-CTTGTACAAGTGCACGAAGAG---------------GGCGGCCCTGGTGGAGGTGAGATGCGCA
AACGCGAGCAACGTGTTTGTTCGCGCGGGAGTGCGTTTCGAT--GAGACGGGGAACTACGGCGGCTACGCCTTGGAGGGC
TGTGATGCTATCGTCGTGCCGGTGATGGGCTCGTCGGGCTCGGCGAACGCGAGCCACTTCGAGCAGCTCATCA--GCGAT
GGCTTCCTCCTGACATGGGATCCACCCC------------CTACACGTAAGTTCA----CCGGCC-AATCATC-TTTTAA
TCAAAGTTCGTAGCTAAGCTA---GGACGTGGAGTGCCTAAGTAACTTTCATGGATTCCCATAATCGATCAAACAATCAA
ACATGTTACTACTCACTAACCGAGGATTAGGATGAAGTTGATAGTTTTTGTTCTTCTTATTCCTACATTTTAGAAATCCA
GTGAATCAAACAGGCCCTAGTTAGTCTGAACTGAGCTCCCGAAGTCGGCCGTATAAACAGCCAAAATTGGCATCACGCAC
TTGTTCAGTAATCCAGTCAGAGACCAGTCACACTT-------TCAGAATTTTCCATTTTGAGACACAGTCACACTTTCAG
CTTCAGACAACATATT-AATTATTTGGAACGTTTGGATGGTTGGATTGGGAGTGGCTACAAGACAGTCAA------AAAA
TTTAAAGGGTCAGTCGATTTCCAATTTTCTATTTCAACCGTTGGATCAAGATCCAACGTCCACAACTTTATCTTCAACCT
CTGAGCATGCACTGTTTCTCTTCAACCTCAAATTTGACCCCTGAGCCGCCAGCTTCCACCGGCCCCC------------G
CCCCCCGCGGCCGGCGGCGCTCCTGCGACCGCCTCGCCGCCCCGCCCTCCCCTGAACCACCTTGAAT-------------
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--CCTAAGATAGATAATAGGGTGC-TGACGGCGAGCCCCTTCCTTCTCTCCGACGAGGCCCTTCCTCCTCCGTCCTTCAT
TCAAAATCGACTGACTCGAAATCAAAATTCAGCTGACTGACATGTAGCTAAAGCCCGTTGGATTACAATGCGTTGGCCCA
CAACAGTGGAATTCTGTCTGGCGTAGCGGAGTTCTTAGGCGTCAAATAGGTGGACAAACGACCACAAGCAGCTATTTGGG
CCAGCTGTTGCCACAACCCATGTTAGCCC--GTGTTTCTTTTTGCGAAAAATGTATTCTTCTTAAT
>chr3D_29
----------------------------CAATGACATCTTCTTTCCAAGTTCAAACCACAGGATCCACGGAAACGGGTCC
TTCAACTCGAACAATCGATAATATCCCTCGTATT--ACAGCCCAACTCAAGCCCGGTGATATTGGTTATTGGTACAATGA
TCATCGTGGCTGGTTGGAATATATATAGCATTGAAAAAAAACGGCATTTTGCTTCTT---TTTTTTGTTTAAGCAACCTA
GAGCTGAAAATCGGGTATTTTGG-------------------------------------GCCAATCTTGGCTGCGCCAC
TTGTTGAGATGCAACATGCTACTGTCTCCCCTTCTCCATCTCATCTCGTTTTGTTCTCGTGCTCGCTGACGAGCGACCTC
CCGCATACTGTAGTGCTTCTGTCAGGCACCATTGATCTCTATGCTCCACCCAACTCCAGCGAGGTTACTCGCCGCTAATC
TGTGCGTCCCGTAACACCACAATGAGACGCACCCTCGGTTTACTCCCCTCAACTCTGGGAAGGCTGGGACGCTGCCAGCC
CATAACAGGTGCACTCCGTGCATGACCTCGCCTGAGACGGAGAATCCTTTTTCTTTTCCCTGAAAAATGTGATCTTTACA
GAG--CTATCCTGATCCAAGAATCCACGAACAAGGCGCACTTGAAAGACAAAGTATGTGAATATGTATGTTTGGTCGCCG
ATAATT-T-----CGGTCTGGACTAAGAGTGGGTACAACTATTAATGGATGATTAATTTTGGATATGACCATCATGCCCT
CTTAGCTGA-----TAGTCTTTAATATCAGCCATTGATTCAATTAAGAGGTGGTGTACTGAAGCAGAATTCTTTAACATG
CGCAACCCAATAATCCAATAAATGATCTTCCTTTTGATCGGCTACTGA----------------AAGTATGAATGCTGTA
CACAGATTAGATT--GGTACAGTAT-----CAAAAAAATTCTCGATAAAGGTTAAAGGGGATCTTGTATTTATAGATAGC
TGACAAAAGCATGAGGTAGCCGGTATGC-AACAAACAG-CCTATAAGCATCCAGGCTCATGTCACGTCACGGGCACACAG
AGGTCATGTTGATGGCTTACCCGTCAATGTGGTAAC--AATTAGAAATTCAGAAACCATGGCCTACAAGTCCAAGTGGTG
GTTGAGAGAGTTCGTGGATGATGATAGCTTT-GCCCCACCTTTCCAGCCATCTGTTCTG---ACCATAGCATT-------
------CGTCCACATATATCCTTCTTCAACCACGATATC----CTCTCATACAGTACATCGTCCCCACAATCCCACGGCC
AAATTT--TTCTGTTCATATGGC---TACTGCCAGCTGCTGGTTCTTGGTGTTCGTCTGGGTAGTA---TGGGGGCTGCC
ACTGACGGCCGC---CAGGGCTGAGGATCAGCA---AGGGGAAGGCTGCT------CGAACTCCGCCAGGAAGTGCGGCA
ACCTCACCATTTCCCGCCCGTTTTGGATCGCCGACAGGGAGGCAGGAAGATCGTGCGGTCCCTTGGACTTCCAGGTCGGT
TGCTCAAATGACACCATTCCATTTCTTCGGAGCTCTGGATTCACTGGATACAGCGGCTTTGCAATCATGGACATCTCGTA
CAAGGACCGCAATCTGCGTGTTGTTGATGTACGCAAAGAGGAAGACTTCAATGTCTCC---AACAGCC------------
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----------------GCTGCAATTTCCCGAGTTGGAACACCTCCAGTAAGCTGGCACTGCCGTTTAAGGTCAACCCCGC
CAACCTGAACCTCAT-CTTCTACAAGTGCATGAAGAG---------------CGTGGCGCTGGTGGAGGTGAGATGCGTG
AACTCGAGCAACGTGTTTGTTCGCGCGGGAGTGCGTTTTGAT--GAGACGGGGAACTACGGCAGCTATTCCTTGGAGGGC
TGTGATGCTATCATCGTGCCGGTGATGGGCTCGTCGGACGGGGCCAACGGGAGCCACTTCGAGCAGCTCATCA--GCGAT
GGCTTCCTCCTGACATGGGATCCACCCC------------CTACATGTAAGTTCA----CCGGCC-AATCATC-TTTTAA
TCAA-GTTCGTAGCTAATCTA---GGACGTGGAGTGCCTAAGTAACTT--------------------------------
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>chr3D_274
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----------GTAACAACACCGTAAGACGCACCCTCAGTTTACTCCCCTCAACTCTGGGAAGGCTGCGACGCTGCCGGCC
CATAACAGGTGCGCTCCGTGCATGACCTCGACTGAGATGGAGAATCGTTTTTCTTTTCCCTGAAAAATGTGATCTTTACA
CA--CCTATCCTGATCCAAGAATCCACGAACATGACGTACTTGAAAGACAAAGTACGTGAATATGTATGTTTGGTTGACA
ATAATT-T-----CGGTCTGGACTAAGAGTGGGTACAACGATCGATGGATGATTAATTTTGAATATGACCATCATGCCCT
CTTAGCTGAAGGGGTATTCTTTAACATCAGCCACCGATTCAATTAAGAGAAGGTGTACTGAAGCAGAATTCTTTAACATG
CGCAACCCAAGAACCT--------------CTTTTTGTAGGCTACTGA----------------AAGTCTGAATGCTGTA
CAGATATTGGAATCGGGTACAGTAT-----CTAAAATTTTCTCGATAAGGAGTCAAAGGGATCTTGTATT--TAGATAGC
TGACAAAAGCATGAAGTAGCCGGTACGAAAACAAACAG-CCTATAAGCATCCAGGTTCATGTCACATCACGGGCACACAG
AGGTCATGTTGATGGTTTACCCGTCAATG--GGATTAGAATTAGAAATTCAGTAACCATGGCCTACAAGTCCAAGGGGTG
GTTGAGGAAATTCGTGGATGATGAT-------------------------------------------------------
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>chr3B_285
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---------------------GTGAGACGCACCCTCGGTTTACTCCCCTTAACTCTGGAAAGGCTGCGCCGCTCCTAGCA
CATAACAGGTGCACTCCGTGCATGACCTCGCCTGAGATGGAGAATCGTTTTTCTTTTCCCTGTAGAATGTGATCTCTGTA
CAAACCTATCCCGACCCAAGAATCCATGAACAAGACGTACTTGAAAGACAA-GTGCTT-AATATGTATTTTTGGTCGACG
ATAAAT-TAATCTCCGTCTGGACTAAAATTTGCACGG-------------------------------------------
-------------------------------------------------------------------AGTTTTTAAAATG
CACAACCCAATAACCCGACAAATGATCATCTTTTTCATCGGATACTGACATAGCATTACCTGTCAAGTCTGAATGTTGAA
TAAATATTAGAGTCTGGC-----AT-----CTAAAACTTTCTCGACG--------AAGGAATCTTGTACT--TAGATAGC
TGACAAAAGCATGAAGTAGCCGGTACGG-AACCAGCCAACCTATAAGCATCCAGGTTCATGTCACATCACGGGCACACAA
AGGTCATGATGATGGCTTACCCGTCAATG--GTGTTAGGATTGGAGATTCAGAAACCATGGCCGACAAGTCCAAGCGGTG
GTTGAGGGAATTTGTGGATGACGATAGCTTA-GCCCCGATTTTCCAGTCATTTGTTCGTACCACCATAGGATT-------
------CCTCCACATATATCTTTCTTCAACCACGATATC----CTCTCATACACAT----TTCTCCACCGCCCCACGGCC
AAATCTTCTTCTGTTCCTATGGC---TACCACTAGCTGCTGGTTCTTGGTGTTCGTCTTGGTAGTA---TGGTGGCTGCC
ACTGACGGACGC---TGGGGCCGAGGAGCAGCA---TGGGGAAGGCTGCT------CGGGATCGGCCAAGACGTGCGGCA
TCCTCACCATCTCCCAACCGTTCTGGCTGTCCCAATTGGAGACGGGACGATCGTGTGGTCCTTTGGATTTTGAGGTCGGT
TGCTTCAACGGCACC---CCAATTCTCCGGAGCTCTGGATCCAGTGGCTT---------TGCGATCATGGACATCTCCTA
TGAGGAACGCAGTTTGCGCGTGGTTGATGCACATAAAGAGAGAGACTTCAACGTCTCCAACAGC---A------------
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----------------GCTGCCATTTCCCAAAGTGGAACACCTCCAGCAAGCTGGCACTGCCGTTTAAGGTTGACCCCGC
CAACCTGAACCTCAT-CTTCTACAACTGCACCAAGACGGTGGCGCGTCCGGACGTGTCACTGGCGGAGGTGAGATGTGGG
AACGGGAGGAACACTTATGTCCGCGCGGGAGTGCGCTACGAT--GCCACCGGGAACTATGGAGGCTACGCCTTGGAGGGC
TGTGATGCTCTCCTCGTGCCGATGATGGGCTCGTCAGGCGGGGCCAACGCGAGTGACTACGAGCAGCTCATCA--GCGAT
GGTTTCCTCCTGACATGGGATCCACCCC------------CTGCACGTAAGTTCA----CCGGCCAAATCATC-TTTTAA
TCAA-GTTTGTAGCTAAGCTA---GGACGTGGAGTGCCTACGTAACTTTCATGGATT-CCATAATCGATCAAACAATCGA
ACATGA-------CATTAGCCGAGGATTAGGATGAAGTTGATATTT------------------------TAGAAATCCA
GTGAATCAAACAGGCCCTAGTTAGTCTGAACTGAACTCCTGAAGTCGGCCATATATACAGCATAAATTGGCATCACACAC
TTGTTCAGTTATCCAGTCATAGACCAGTCACACTT-------TTTT---------TTTTGAGACAAAGTCGCACTTTCAG
CTTCAGACAACGTATCAATTTTTTTGGAACTTTTGGATTGGTTGGATT--------------------------------
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>chr3A_612
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----------------------------------------------------------------AAGTCTGAATGCTGTA
CAGATATTAGAATCTGTTACTGTAT-----CTAAAATTTTCTCGATAAAAGGTAAAGGGGATCTTGTATT--TAGATAGC
TGACAAAAGCATGAAGTAGCCGGTATGGAAACAAACAG-CCTATAAGCACCCAGGTTCATGTCACATCACGGGCACACAG
AGGCCATGTTGATGGCTTACCCGTCAATG--GGATTAGATTTAGAAATTCAGAAACCATGGCCTACAAGTCCAAGCGGTG
GTTGAGGGAATTCGTGGATGATGATAGCTTT-ACCGCAACTTTCCAGTCATTTATTCAG---ACCATAGGATT-------
------CGTCCACATATATGCTTCTTCAACCACGATATC----CTCTCATACG-----TCTTCCCCGCCACCCCACGGCC
AAAATTT--TCTCCTCCTATGGC---TACTACAAGCTGCTGGTTCTTGGTGTTCGTCTGGGTAGTA---TGGGGGCTGCC
ACTGACGCTCGC---CGGGGCTGAGGAGCAGCA---AGGGGAAGGCTGCT------CGACCTCGGCCAAGACGTGCGGCA
ACCTCACCATCACCCATCCCTTCTGGATAGCTGACAGGGAGGCGGGAAGATCCTGCGGTCCCTTGGACTTCCAGGTCGGT
TGCTCAAATGACAGCATTCCGTTTCTCCGGAGCTCTGGATTCACTGGATACACCGGCTTTGCAATCATGGACATCTCATA
CAAGGACCGCAATCTGCGTGTCGTTGATGTACGCAAAGAGGAGGACTTCAATGTCTCCAACAGC---C------------
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----------------GCTGCAATTTCCCGAGTTGGAACACCTCCAGTAAGCTGGCACTGCCGTTTAAGGTCAACCCCGC
CAACCTGAACCTCAT-CTTCTACAAGTGCACAAAAAG---------------GGTGGCGCTAGTGGAGGTGAGATGCGTG
AACACAAGCAACGTGTTTGTTCGCGCGGGAGTGCGTTTCGAT--GAGATGAGGAACTACGTCGACTATGCCTTGGAGGGC
TGCGACGCTATCGTCGTGCCGGTGATGGGCTCGTCGGACGGGGCCAACGCGAGCCACTTCGAGCAGCTCATCA--GCGAT
GGCTTCTTCCTGACATGGGATCCACCCC------------CTACAAGTAAGTTCA----CCGGCC-AATCATC-TTTTAA
TCAA-GTTCGTAGCTAAGCTA---GGACGTGGAGTGCCTAAGTAACTT--------------------------------
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>chr3A_742
TTCTG---------------------------------------------------------------------------
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-------------------------------------------------------------TCACATCACGGCCACATAG
AGGTCACGTTGATGACTAACCCGTCAATG--GGGACAGA-----AAATTCAGAGACCGTGGCTTACAAGTCCAAGGCGTG
GTTGAGAGAATTAGTGGATGATGATAGCTTTTGCCCCGATTTTCCAGTCAAATGTTGCG---ACCGTTTGTACTCCACTC
GCTCGACGTCCACATATGTCATTCTTCGGCCACTGCATCTCCTCTCTCATACACAT----ATCTCCACCGCCCCACGGCC
AAATCTTCCGTTCTG---ATGCCTATTATTACAAGCTGCTGGTTCTTGGTGTTCGTCTGGGTAGTA---TGGTGGCTGCC
ACTGATGCTCGC---CGGGCCTGAGGATCAGCT---AGGGGAAGGCTGCTTGAGCCCG------GCCAAGAAGTGCGGCA
ACCTCACCATCTCCCGCCCGTTCTGGCTAGCTGAATTGGGGATGAGAAGATCGTGTGGTCCCTTGGATTTTGAGGTCGGT
TGCTTCAACTACAGCACTCCAGTTCTCAAGAGCGCTGGATTAACTGG---------CTTTGCAATTCTCAACATCTCCTA
CGAGAATCGCAGTCTGCGTGTCGTCGATGTATACAAGGAGGAAGACTTGAGCCACTCCAAGGGC---AGCTGTCGGTTCC
CGAGATGGAACACCTCCGGCAAACTGGCAACCCCGTTTAAGGTCAG----------------------------------
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--------------------------------------------------------------------------CCCCGC
CAACCTAAACCTCAT-CTTTTACAAGTGCACGAAGACTCCGGCGCATCGGGGCAGGGCGCTCGTGGAGATAAGATGTGGG
AACGCGACGCACGCGTTTGTTCGCGCGGGAGTGCCCTACGAC--GCGACCGGGACCTACGGCGGCTACGCCTTGACGGGC
TGCAATGCCACCGACGTGCCGGTGATGGGCTCGACGA-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
>chr3A_994
TATTC---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------TCTG---ATGGC---TATGGCC---TGCTGGCTCTTAGTTTTCGTCTGGGTT------TGGTGGTTGCC
ATTCATGTTCGC---CCGGGCTAAGGAGCAGCA---AGGGGAAGGCTGCT------CG------GCCAAGAGGTGTGGCA
ACCTCACCATCTCCCACCCATTCTGGCTCACTGACCTGGAGACAGGAGCATCGTGTGGTTCCTTGGATTTCGAGGTCAAA
TGCAATA---ACAGTATGCCAGTTCTCCGGAGCTCTGGATCCACTGGATTAAGTGGCTTCGCAATCAAGGACATCTTGTA
CGAAGAACGCAGTTTGCGTGTCGTTGATCTATACAAAGAGGAAGACTTTGACGTCTCC---AAC---GGCTGCAATTTCC
CGTGATGGAACACCTCCCGCAAACTGGTACACCCGTTTAAGGTCAATCCCGTCAACTTGAACCTCATCTTCTACAACTGC
ACCAAGACGGT---------------GGCGCTGGTGGAGATGAGAT----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------GCGTG
AACACGAACAACACGTTTGTCCGTGCGGGAGTGCGCTACGAC--ATGACGGGGGGCTATGCCGGCTACGCTTTGGAGGGC
TGCGATGCTATTGTCGTGCCAGTTCTGGGCTCGTCTGGCGAGGGGAACGCGAGTGACTACAAGCGTCTCATCA--GCGGC
GGATTCCTCCTGACATGGGATCCACCCC------------CTGCACGTAAGTTCTTCAGCCGTCA-AATCATCTTTTTTA
TGAA-GTTCGTAGCTAAGCTA-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
>chr3B_997
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------TCCTATGGC---TACGGGC---TGCTGGTTCTTAGCCTTCTTCTGGGTT------TGGTCGCTGCT
ATCTGTGCTCATTCTGGCGGCTGAGGAGCAGCA---AGGGGGTGGCTGCT------CG------GCAAACAGCTGCGGCA
ATCTCACCATCTCCTAACCATTCTGGCTCCCCGACATGGAGACTACAAGATCATGTGGTCCCTTGGATTTTGAACTCAGT
TGCATCGACGGCAGTGTTCCAGTTCTCAGGACCTCTGGATTAAGTGG---------CTTTGCAATCATAGACATCTCTTA
CGAGAAACGCAGTATGCATGTCGTTGATGTACAGAAAGACAAAGACTTCAACGTCTCC---AGC---GGCTGCCATTTCC
CGTTATGGAACACCTCCGCCAAACTGGCACCCCTGTTTCAGGTCAACCCGGCCACCCTGAACCTCATCTTCTATAACTGC
ACCAAGATGATGGCACCTCAGGACAGGGCGCT------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------GGCCGAGGTAAGATGCGTG
AACACGAGTAACGCATTTGTTCGCGCGGGAGTGCGTTACGAC--GCAATCGGGGACTACGCCGGCTATGCTTTGGAGGGC
TGCGATGCGAGGTACTGGGCACA-------TCGGGAGGAGGGGCGAATGCGAGCGACTACAAGCAACTCATCA--GCGAT
GGCTTCCTCCTGACATGGGATCC---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
>chr3B_1011
CCA-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------GCT---TGCTGGTTCTTGGTCTTTGTCTGGGTA------TGGTGGCTGCC
ACTGATGCTCGC---GGGGGCCAAGGAGGAGCATCGAGTGGAATACTGCC------CG------GCTGAGAGGTGCGGCA
ACCTCACAGTATCCAATCCATTCTGGATCGCTGACGGGGAGGCGGGAAGATCGTGTGGCCCCTCGGACTTCCAGGTCAGT
TGCTTAAACGACAGCAATCCATTTCTCCTGAGCTCTGGATTCACTGG---------CTTCGGAATCATGGACATCTGGTA
CGAGGACCGCAATCTGCGTGTCGTTGATGTACATAAAGAGGAAGACTTCAACGTCTCAAAGAGC---AGCTGCAATTTCC
CGAGTTGGAACACCTCCAGCAAGCTGGCACTGCCGTTCAAGGTCAACCCCACCAACCTGAACCTCATCTTCTACAAGTGC
ACCAAGACGGT---------------GGCGCT------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------GCTGGAGGTGAGATGCGTG
AACGCGAGCAACATGTTTGTTCGTGCGGGAGTGCGTTTCGAT--GAGACGGGGAACTACCATGACTACGTCTTGGAGGGC
TGCGATGCTATCGTTGTGCCGGTGATGGGTTCATCGGGCTGGGCCAACGCGAGCGACTACGAGCAGCTCATCA--GCCGT
GGTTTCCTCTTGGCATGGGATGAAACTCTTCAACCTGCAACTGCACGTAAGTTCA----CGCATCAAATCATC-TTTTAA
TAAA-GTCGTA---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
>chr3B_1011
CCA-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------GCT---TGCTGGTTCTTGGTCTTTGTCTGGATA------TGGTGAATACC
ACTGATGCTCGC---CGGGGCCAAGGAGGAGCATCGAGGGGAATACTGCC------CG------GCTGAGAGGTGTGGCA
ACCTCACAGTATCCAATTCATTCTGGATCGCTAACGAGGAGGTGGGAAGATCGTGTGGCCCCTTGGACTTCCAGGTCAGT
TGCTTAAACGACAACAATCCATTTCTCCTGAGCTCTGGATTCACTGC---------CTTCGGAATCATGGACATCTGGTA
CGAGGACCGCAATCTGCGTGTCGTTGATGTACATAAAGAGAAAGACTTCAACGTCTCAAAGAGC---AGTTGCAATTTCC
CGAGTAGGAACACCTCCAGCAAGCTGGCACTGCCGTTCAAGGTCAACCCCACCAACATGAACCTCATCTTCTACAAGTGC
ACCAAGATGGT---------------GGCGCTGCTGGAGGTGAGATATGTGAACGCGAGCAACATGTTTGTTCATGCGGG
AGTGCGTTTCGGTGAGACCGGGAACTATGACGACTACGCCTTGGAGGGCTGTGATGCTATCATCGTGCCGGTGATGGGTT
CGTCGGGCTGGGCCAACGCGAGCGACTACGAGCAGCTCATCAGCCATGGTTTCCTCTTGGCATGGGATGCATCTCCACTA
GGGCCCCCAAGAAGCCTCCCCAAGCTACTTTTTAGGCGCCGGCGGGCAAAAAACGCCCCACTATGCCCCCAAGTGTTCGT
TTTTCGCCGGCAAAAGCAAAAAACAGCGCCGACAGCCGCATGCAACCCCCAGCGTGCCGGGGGGCTCCTGGGGGGCGTAA
TTTCGCCATTTGAGGCGCTGGCCCACCTGCCAATGTCTCCCTCCTGTCCCCTCACTTTCCTCACTGGCACACCCACGTGT
TTCCTCCTCTCTCTCTCTCCCTCCACGCACACACACAGACACGGCATGGAAGCCCTTCGCTCCCGTCCCCGCTGCCTGGC
ACGCCGCTTCGCTCTCGTGTCCGTCGCGGAGGGCCGCCCACGCCCAGCCGCCCGGCCGCCTCCGCC--------------
--------------------------------------------------------------------------------
------------------------------------------------------------------TCGCCGCCGTGCTC
CCTGCAGCCCGGTTGCCTCAGCCTTGCCGTCGTGCTCCCTGCAGCCCGGCCGCCTCAGCCTTGTCGCCGGAGGACGGAGC
CCACGGTCCTCCGTGGAGAGCCCGTCCGCCCAGCCCGCGGGCGCGCCGCTTGTACTCGTCGACGCTGAACCTGTCGTCCT
TGGTCGAGGCGCACCATCTACAGCTCCCTCGAAGCCGGCACCTGCTTCTTCGAGCTCGCACACGCCGGCGCGTACCATTG
ACGATCGGCCATGGCGGCAGTGGAAGCAGTGTGCGCTTCCCCTGGTCGGCATGCTCGCCGAGCGCCTCTACGGCTACAAG
CTGGTGCGTTCTGCTGCAAGCGACGCAGAGCATGCGTCCTCCGTCGAGACCTGCATGAGAACAAGTCCCAACTTGTCAAT
GAGCATCCTCCAAAGCCTAAGAGTGTAACGACACTTGAAGAAAAGATGGATGGCAGACTCTTGCTCCCTTTTGCAAAGTT
GGTCCATCAGACTAACCTGGACAAGCAATATCACTGAAACGGCTTGGCCGGACAAATGAGTCCAGAAATAGCACGCATAG
GAACCTATTAGGATTCAAACAGCCATCGTTCAGCCACGTGCAACTGATACCGTCCCTAGATTGACAAACGCCAGCAGAGC
GCCGCCATGGTCCGCCGACACGACGCTTCCCCGCTCGAAGACGACGACATGCTCAGGGAGATCCTCCTCAACCTCGCCCA
ACCGTCCTCTCCCCCTCGCGCCTCAGCCGTCTGAAAGCACTGGCGAGGAATCCTCACGGACCCTGGATTCCTCCGCCGTT
TCTACACACACCATGAAGAGCCACCCCTCCTTGGCATCTTCCATCAGCTCCAATTCACTCCAGTCCTAGCCGCTCCTGAC
CACATCCCTTTTGGGCGCCTTGACCTGCCAACCCGCGACTTGTGGGACCGGTTCCTCGGGTGCCGCCATGCCCGAGTCCT
CATCTCACATCGGTTGCCTCTGGAGGTCCTTGTGTGTGACCCCATCATGGGAGACCAACAATGTGTGTCAATTCCACCTG
AGTTCAAGAGGGGCCACCTCCACGGGACGGCCCTCTGTGCGGCACGCGACAAGGTCCATGTGCACGGTGGTTGCCACTCC
ACCCCCTTTAAGGTCGTTTTGCTGCTTATTAATGATTTTTATCACAAACATATGAGTCTGACTTTTTGAAGATGCCCACA
AGTGATGCCGGAACCATGACAACTTTTTGCTGGAACCATGACATCAAATGCTAGAACCATCATGCCTTTTTTCTTGGACT
GGGAGATGGATTTGATAGGATGGTGAATGTTGATGCTGGAACCACAATGCCAAATGATGGAACCATTACCATTTCTTGCT
ACAAATGGAGATGGATTATTGCTGGGACCGTGAAAGATTGATGCTGGAACCAAGAAGATTTTTTGCTAGAACTGGTGATG
GGTTCTGCTGGAACCGTGAAGGATTGATGCCGGAACCCGCGAAGACATGAACTCCCAATTGTGACCATGACCGGTAGGTG
CTACAACCATGGCAGCCAGATGCTGGAACAATGGCGGTGGGAACCTAGAAGCGGTGGCCGTAGCCGGCAAGTACCACGAG
GTGAGTATTAATTGCATGCGTCGATGGTCGGTGCTGTCAGTGGCGACAGTGATGCTACTACCATGGCCGATGTGAGCTGG
AACCAGCACCCTGGCAAGCTAGAACCAGCACTTCGGTGAGCTGCAAAACTGGGGGGAGGCACCCGATGTTGTGGTCATCT
GTGTTGTTAGCTGGAACAAGCACAACGACGAGGTACAATAGAGGCGCTCGATGCTGCAACTAACAAGGCAGAGATGTGAA
GACCGACGACGACCAGGATGGTTCAGTGAGGGTGGCTATGACGGTGCTGGCCTTGTGACAAGGGGAGAAAGATGATGCGA
GCCCGCTCGACAACTTAGTGAGCCCAACCGGGCGGGAGGGGGGGGGTGCTACAAGCTCGCCGACATCTTCTAGAAATGCC
TCAGCAACGGTGTTGCGAGCTCGCTGTCCGGAAGGCGTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCGGCAGATCAGATGGCGTTG
AACCAGGGGGCGGGATGCACTGCGAACCATCGACCTAGGGGACATGCTGCTCATCGAAGCAGATGACAATGACCGTGCGT
GGGGGTCGGAACACGATAGGAAAAGGCAAGGAGGTGGCGAAGAGAGGATCAAACGGTCCATGTACATTAGATTAAATGGC
TAACAGGTGACTGGCCCAAATTTCGGCCGGCTGACTAGCGGCTAGCCTTGCCCTAACTAATGCCTGTTCTAGGCAACATG
ATAAGATGGATAAGACTAGAAGAATCTGTCAAGGGCTCAAGGCTATAAATTGGCTTCAATTCACCCTAATATTATTTTAG
TACTGAAGGTTAGACCGCTTTTTTGTATCGACGCTGTTTCCTGCCAAGTGTGAAGGTTGTACAAAGATTAGAATCTACTT
CTAGCCAGATACTAGCGGACAAAAGCATGAAGTAGCAGATACCGAAAGAACCAGTCTAAGCATCCTGGTCCCAGTCGCAT
CAGGGGCTCACGGTGGTCATGGCTTACCCCGTCAAAGGGACTTGCCAACTTTTCATGATCCTTCTATAGGTCCCACACAT
CTGAAAGTTTTCATCCACCATCGGGGTACGCTATTCCATCCTGCTTCACCCCAGACCCTTGATCACCACTACCCGCAGCC
CAAAAGAACTCCATTGCCCCAATATATCATTCATTCTGCAGGCACGCTATTCCATCCTGCTTCACCCCAGACCCTTGATC
ACCGATTCAGTTTGGTATAGTCTATCTATCTATTACTCCCTCCGTTCCGAATTACTTGTCGCAGAAATGGATGTATCTAG
AACTGAAAAATGTCTAGATACATCCATTTCTACGACAAGTAATTCCGAACGGAGCGAGTAGCTGCCAAGTGCTAAGACAA
ATTACAAGTCTTATATGGCTCCAGCTTTCTGGTTCTTGGTCTTTGTCTGGATATGGTGGCTGCCACTGATGCTCGCCAGG
GCCAAGGAGGAGCATCGAGGGGAATACTGCCCGGCTGAGAGGTGCGGTAACCTCACAGTATCCAATCCATTCTGGATCGC
TAACGGGGAGGCGGGACTTCCAGGTCAGTTGCTTAAACGACAACAATCCATTTCTCCTGAGCTCTGGATTCACTGGCTTC
GGAATCATA-----------GACATCTGGTACGAGGACCGCAATCTGCGTGTCGTTGATGTACATAAAGAGGAAGACTTC
AACGTCTCAAAGAGCAGCTGCAATTTCCCGAGTTGGAACACCTCCAGCAAGCTGGCACTGCCGTTCAAGGTCAACCCCAC
CAACTAGAACCTCACCCTTCTACAAGTGCACCGAGAC---------------GGTTGCGCTGCTGGAGGTGAGATGCGTG
AACGCGAGCAACATGTTTGTTCGTGCGGGAGTGCGTTTCGAT--GAGATGGAGAACTACGATGACTACGTCTTGGAGGGC
TGCGATGCTATCGTTGTGCCGGTGATGGGTTCATCGGGCTGGGCCAACGCGAGCAACTACGAGCAGCTCATCA--GCCGT
GGTTTCCTCTTGGCATGGGAT-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
>chr3A_1170
GGCGAACCCCAGCA------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------ACTACGAGGAGCTCATCAGCGATGGCTTCCTCCTGACATGCATGGCAGCCGCCAAA
TTACCGTAGTGGTAAGCTCAC-----------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------TCACCCTCGTTAGTCGTCAAATACTTCTCGGGAGCAACTAGGCGA
CGGGCAGTAGATTAGTTCCAAGGACTGGACGCATCGACGCGACAATTTTGCCCACTGAGATGATCAACATCGCCTGCCGT
TGGCGTAGAATCCCCAGTTTCAAACAAGCTGGAGCACAGTATAAGATTTAATTAGAAATGACAATACATTTAAAATGAGA
TATGGATTCGCCCAACGAAAAGGTGAGAGATGTGAGACTTGTGACCGTCTGTCATTGCTAGTGGCGATATGGCACCGTCT
GTGCACCGTCCTGGATTGGGCGGGCACTACCTGCGTCTCTAGCATTAGCCAGTCCTGCCACGGAATTCGCGTGCCTCTGC
ACTGCAGTTCGCGTGCCTCTGCTAGTCTCAACCAAGCTGGAAACGATTAGTGATAAA-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------TGGATTCCTCCAAAGAA
GAGAAGTGAGAGATGCCAGACCTGTCACCGTCTGTCATTGCTAGTGGCAAAATGGCACGATCCTTCCGAT----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------CTGTGAACTCCACACAAAGATATTTGACCAATGAAGATTTTCAAGTCATGAGAAAGTAA
AA------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------GACAATGATACTTTGACCGTGGACGGTTGCGGCAAT
TGTTAGGCCGCGTGGGACTAGTATTTTTTTGTCTCAA-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------GTCTTCCCTTGCCCCGTCAATTGGGATACTCAGAGAATACGCATGTTAGACGTACTATGACTGG-
--------------------------------------------------------------------------------
--AAAGGACTCCACTACGCCAGTATATACTACTGTATATAGTATCACTCATTCTAAAGCACAGTATTCTCTCTTGTATCG
TATTGTATCTCCCCACAAGCCCCCTTCTTTTTTTTGCTGCACCAAATTTCAAGCTTATTCTCTG----------------
--------------------------------------------------------------------------------
--------------ATGGCTATGGCCTGCTGGCTCTTAGTTTTCGTCTGGGTTTGCTGGTTGCCATTCATGTTCGCCGGG
GGTAAGGAGCAGCAAGAAGATCGTGTGGTTCCTT----------------------------------------------
-------------GGATTTCGAGCTCAATTGCAATAACAGTATC---CCAGTTTTCCGGAGCTTTGGATCCACTGGGGAT
AAAGTGGCTTTGCAATCAAGGACATCTTGAACGAGGAACGCAGTTTGCGTGTCGTTGAACTGTACAAAGAGGAAGACTTT
AACGTCTCCAACG---GCTGCAATTTCCTGAGGTGGAACACCTCCCGCAAACTAGGACACCCGTTTAAGGTCAATCCCAT
CAACTTGAACCTCAT-CTTCTACAACTGCACGAAGAC---------------GGTGGCGTTTGTGGAGGTGAGATGCGTG
AACACGAGCAACGCGTTTGTCCGCGCGGGAGTGCGCTACGACATATGACGGGGGGCTATGCCGGCTACGCTTTGGACGGC
TGTGATGCTATTGTCATGCCGGTTCCAGGCTCGTCAGGTGAAGGGAAAGCAAGTAACTACAAGCGTGTCATCAGCGCGAT
GGCTTCCTCCTGACATGGGATCCACCCC------------CTGCACGTAAGTTCTTCAGCCGCCA-AATCATC-TTTTCA
TGAA-GTTCGTAGCTAAGCTACTAGGACGCGCAGTGCTAATTAATTTGCTGGATT-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
>SNPs
S----SSSSS-SSSSSSSSSSSSSSS------------------------------------------------------
-----------S--S---------------S---SS-----------------------------------S-SS-----
------------------------SS-SSSSSSSSS-S--SSSSSSSSSSS---S--SSS-SSS--SSSSSSSS-SSSSS
-S-SS-S-SSS--SSSSSSSSSS-SSS---SSSSS---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------S--------
----------------------------S---------------------------------------------------
--------------------------------------------------------------------------------
------S-------------------------------------------------------------------------
-------------------------------------------------------------------------S------
---------S-------------------------------------------S--------------------------
--------------------------------------------------------------------------------
---------S---S----S-------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------S------------------------------------------------------
--------------------------S-----S-----------------------------------------------
------------S-------------------------------S-----------------------------------
---------------------------------------S----------------------S-----------------
-------S-------------------------S----------------------------------------------
-----------------------------------------------S-S------------------------------
---S---------------S------------------------S-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------S------------------------S------------------------------
--------------------------------------------------------------S-----------------
-------------------------------------------------------------S---S--------------
------------S-------------------S----------------------------------S-SS---------
-----------------------------S----------S-------S-------------------------------
------------------------------S--------------S----------------------------------
------S--------S------S------------SSSSSSS-----------------S--------------------
------------------S------------------------------------------------SS-SSSSSS----
---------------------S--SS------------------------------------------S-----------
S--------------------------------S-------S------------S-----S---SSSSSSSSSSSSSSS-
-----------------------S----S------S----S---S-------------S--SSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SS---------------S---SSSS--------------------------SSS-------------------------S
---S---S-------S--S-S--S---------S-----------------SSSSS----------SS-----------S
--------------------------------S----S--------------------------SSS-------------
-----------------------------SS--S---S------S------------S-S------
>forward_266
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------GAGGGAGTAGCGCGCTATTT------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
>reverse_1650
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------CCACTGGCTTTGCGATCATG-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
>forward_1648
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------GGAGCTCTGGATTCACTGGG--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
>reverse_7397
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------TTTTTCTCCGGAGAAGCCCC------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
