>input_sequence_71692
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------ATGGCA
GCTGCTCCTTCTGCCTCTGCCGTTTCCGTCAGGCAGAGGAATGCCGCGGCAGCATCGCTACTGCTCCAGGATCAGCAGCA
AGAAAAGCATGAAGCCGTGGATCCGGTGCCGCCGCCGCCGCCGCCGCCACGATCGACGCTGTACCAGGCGCTGACGTCGA
CGGCGAGCCTGGCCAACCTGCTCCCCACGGGCACGGTGCTGGCTTTCCAGCTGCTCGCGCCGACCTTCACCAACCACGGC
GCCTGCGACGCCACCACGGCGCTGCTCACGCGGATCCTCCTCGCCGTCCTCGCGCTCTCCTGCCTCCTCGCCTCCTTCAC
CGACTCCCTCAAGGGCCCCGACGGCCGCGTCTACTACGGCGTCGCCACCCTCAGGGGCCTCTGGCTGCTCGACTACCCGC
CCGGCGCGCCCACGCCGCCGGACACGTCCAGGTACAGGCTGGCGCCAATCGACGCCGTGCACGCGGCGCTGTCGGTGGCC
GTATTCGGGGTGGTGGCGGCCAGAGACAAGAACGTTGTGCGGTGCTTCTACGGCCCGTCGCCGGCGAGAGAGACGGAGCA
GGTGCTGGACATCGTGCCGCTCGGCGTCGGCGTGCTCTGCAGCTTGCTCTTCGTCGCGTTCCCCACCAGGCGGCACGGCA
TCGGCTACCCTGTCACCAACGGCGCCGCTGGCAGCAGCACCTGA------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------
>chr7D_1_TraesCS7D01G320400
TGATCTGTCTTTTTTTTTCCTTTGATGGTTGTTGTGATGGTGCGAGAGGCAGGTGACGTGCATTGGTGTCAAGCTCAGAT
GATTCTTCGGTCTTGTTTGTAATTTTACTTCTCATCGGCGTTCCTTTGTGCATAGGCTAGTGTTCTACTGTCTTTTTAGT
TTTGCCAGGTCGATATGTACGTGACTTGTATTATGATCCTTATGATATAAATAAGACACGTATTACCATAAAAAAGAATT
GATTGGCGTTAGGGAGAGGACCGGACCCACCCACCTGAAATTCGGGAGGGGGGATGAGTGGATTAGTTGGAAGGTTACGT
TAACTTACGTAGGTGTATGATTTTGGAAGAATTAGATTATGAAGTTTAAGACTAAGTAGATGTTTTTA------------
---CGATAAAACTCAGGTGAAAGTGCGAAACCTTGTGCTTTATTATCAACCG----------GGCATGATGATCATTCGT
CAGCGTGTGGGGTTTATCTTTGCTCCAATGGCGACTTACCACGTCGAGTCGTTTGACAAAAGTGTCCCTAAGATGGAAGC
TCCCAAACTGATCAGG-GATTGATCATTTAGCGTGGTGCGCTTAGCTTGCTCCACCGTGGAGAAACT-AAGTACTCGTAG
CATGCAAATTCCGGCAGTTCCGTGTCAGCACAGCGAGGCCTTCCCCCTCCCTTCTTCCCTCGATGGATGAGGCAGTTACG
TTACGTTTGCAGTGCGACGCCATCCATGTTGACATGTTGCCTATTCCTTGACGCCTTCCACAAACCGAAGTACCCAACCC
TCCCTAGTCGACACTGCCAGCCTAAGCAAACTCGAAGACACGCAAGAACCAGCCATCCCACAATAGAAAACCAC---CAC
CCCGCAAGCACGCACAAAACGCCTACT----CCTCCATCAAGAATCTTCTACGCACGTTCCTTCGTCTCGCACATGCATC
TCTAGCTAGCTAGCTAGTGCATTTGATTACAAATATCCATCCAGATCCAAGCCAGTCACTCACAATAATCGATCATGGCA
GCTGCTCCTTCTGCCTCTGCCGTTTCCGTCAGGCAGAGGAATGCCGCGGCAGCATCGCTACTGCTCCAGGATCAGCAGCA
AGAAAAGCATGAAGCCGTGGATCCGGTGCCGCCGCCGCCGCCGCCGCCACGATCGACGCTGTACCAGGCGCTGACGTCGA
CGGCGAGCCTGGCCAACCTGCTCCCCACGGGCACGGTGCTGGCTTTCCAGCTGCTCGCGCCGACCTTCACCAACCACGGC
GCCTGCGACGCCACCACGGCGCTGCTCACGCGGATCCTCCTCGCCGTCCTCGCGCTCTCCTGCCTCCTCGCCTCCTTCAC
CGACTCCCTCAAGGGCCCCGACGGCCGCGTCTACTACGGCGTCGCCACCCTCAGGGGCCTCTGGCTGCTCGACTACCCGC
CCGGCGCGCCCACGCCGCCGGACACGTCCAGGTACAGGCTGGCGCCAATCGACGCCGTGCACGCGGCGCTGTCGGTGGCC
GTATTCGGGGTGGTGGCGGCCAGAGACAAGAACGTTGTGCGGTGCTTCTACGGCCCGTCGCCGGCGAGAGAGACGGAGCA
GGTGCTGGACATCGTGCCGCTCGGCGTCGGCGTGCTCTGCAGCTTGCTCTTCGTCGCGTTCCCCACCAGGCGGCACGGCA
TCGGCTACCCTGTCACCAACGGCGCCGCTGGCAGCAGCACCTGAATAAATTAAACTTACCCGCGTATTACAAAGCTCAAG
AATTACTCTGGTTACAGTAGTACTCCTGCTAACTTAAGAGCATTGTATCATTCTATCATTTCGATTTCTTGCTTATTTGC
CTGTGGGATGTAAACGATCCGACTATAGATTCTACACACAAAA-------------------------------------
-----------GATGAGTAAAATGCATCTGGGTACTATT-------AGTGTCGATGCGGCCCTAATTTTTTTCAAAATGC
ATGCC--TGGGTCCTAAATCTTTTTAAGTTGTTCATCCGAGGTCCTAATTCCATCCAACCGCCGCTGACCAGCTTGCGTG
GCACTTTGACCGCCGCCACGTGGACTC--GAGG-CCCAGGCTGGATAACGACTTGTCGTACATATCTGCAAAAGAACCCT
CGAACCCTAATTCCTTTCCAG------TCGTGGTC--CTTTCCTCCTCCCCACCCC---TCTCTG-----------GCGA
AACAGGGGCGGTCGACGGCGAAGGCACTGCTCCGGTGAGAAG----AGGC-GGTCATCGCAGGCAGTTGTCC------GA
CGGCGGCCCCGCTAGGATGGCACTCGTGCTGCGGCGACATGGAGATCCTCCTCTACGATATGGTCAGTG-----CCCGTA
ACCCTAACCCTCGATGCTACTC-----------TTTTTTCCGAT--TTAGGCCGAATCCATGGTAGATTTTGACCGAAT-
CCTTGTAATCTAGGACTACAAGAGGAGCTTTCCATTGTAGAAATAAACTATGATGAATTTTTTTGGCGGATTTGGCAAAT
CGAAGACATATGTTGATGGCAAAGTTGCTCTGTTTG------ATGGTTGTGAAGTAGATACATTGTCTCCTCTCTCGC-C
ACTGATTTTATGTGGCAATTAG-GATATAATGACCAACCAAAGATCATTTTACACTAGTTGCTCCCTAGAAAGATTCTAG
A-TGATGGACTCCAGATTATGGACTGTGACACTGACACATTGCACATGGCAGCACTTGTTCCAAAGTTCCAGTATTTTCA
GTTGTTTATGGACCACAAAGATATGACATTTGACAATGTAATTGA
>chr7B_337
ATAATTTTT-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------GAAGAATTAGATTATGAAGTTTAAGATTAAGTAGATGTTTACATAGATGCTGGAT
TATCGAGAAAACTCAGGTGAAAGTGCGAAACCTCGTGCTTTCGACGAGGGGATTATGAACCTGGCATGATGATCATTCGC
CAGCGTGTGGGTTTTATCTTTGCT--------------CCACGTCGAGTCGTTTGACAAAAGTGTCCCTAAGGTGGAACC
TCCCAAACTGATCCAGTGATTGATCATTTCGCGTGGTGCGCTTAGTTTGCTCCACCGTGGAGAAACT-AAGTACTCCTAG
CATGCAAATTCAGGCAGTTCCGTGTCAACACAACGAGGTCTCTCCCCTCCCTTCTTCCCTCGATGGATGAAGCAGTTACG
TTACGTTTGCAATGCGACGCCATCCATGTTGACATGTTGCCTATTCCTTGACGCCTTCCACAAACCGAGGTACCCAACCC
TCCCTAGTTGACACTGCCAGCCTAAGCAAACTCGAAGACACGCAAGAACCAGCCATCCAGCAATAGAAAACCAC---GAC
CCCGCAAGCACGCACAAAACGCCTAGTCCTCCCTCCGTCAAGAATCTTCTACGCACGTTCCTTCGTCTCGCACATGCATC
TCTAGCTGTCTAGCTAGTTTATTTGATTACAAATATCCATCCAGACCCAGTCCAATCACGCACAACAATCGATCATGGCA
GCTGCTCCTTCTGCCTCTGCCGTTTCCGTCAGGCAGAGGACTGCCGCGGCAGCATCGCCACTGCTCCAGGATCAGCAGCA
AGAAAAGCATGAAGCTGCTGATCCGGTGCCGCCGCCGCCGCCG------CGATCGACGCTGTACCAGGCGCTGACGTCGA
CGGCGAGCCTGGCCAACCTGCTCCCCACAGGTACGGTGCTGGCTTTCCAGCTGCTCGCGCCGACCTTCACCAACCACGGC
GCCTGCGACGCCACCACGGCGCTGCTCACGCGGATCCTCCTCGCCGTCCTCGCGCTCTCCTGCCTCCTCGCCTCCTTCAC
CGACTCCCTCAATGGCCCCGACGGCCGCGTCTACTACGGCGTCGCCACCCTCAGGGGCCTCTGGCTGCTCGACTACCCGC
CCGGCGCGCCCACGCCGCCGGACACGTCCAGGTACAGGCTGGCACCAATCGACGCCGTGCACGCGGCGCTGTCGGTGGCC
GTATTCGGGGTGGTAGCGGCCAGAGACAAGAACGTTGTGCGGTGCTTCTACGGCCCGTCGCCGGCGAGAGAGACGGAGCA
GGTGCTGGACATCGTGCCGCTCGGCGTCGGCGTGCTCTGCAGCTTGCTCTTCGTCGCGTTCCCCACAAGGCGGCACGGCA
TCGGCTACCCTGTCACCAACGGCGCCGCTGGCAGCAGCACTTGAATAAATTAAACTTACCCGCCTATTGCAAAGTTCAAG
AATTACTCTGGTTACAGTAGTACTCCTCCTAACTTAAGAGCATTGTATCATTCTATCATTTCGATTTCTTGCTTATTTGC
GTGTGGGATGTAAATGATCCGACTATAGATTCTACACACAAAA-------------------------------------
-----------GATGAGTAAAATGCATGTGGGTATTA-T-------AGTGTCGATGCGGTCCTAATTT-TTTCAAAATGC
ATGCC--TGGGTCCTAAATCTTTTTAAATTGTTCGTCCGAGGTCCTAATTCCATCCAACCGCCGCTGACCAGCTTGCGTG
GCGCTTTGACCGCCGTCACGTGGACTG--GAGG-CCCAGGCTGGATAACGACTTGTCATACATATCTGCAAAAGAACCCT
CGAACCCTAATTCCTTCCCAA------TGGCGGTC--CTTTCCTCCTCCCCACCCC---TCTCTG-----------GCAA
AACAAGGGCGGTCGACGGCGAAGGCACTGCTCCAGTGAGAAG----AGGC-GGCCATTGCAGGCAATTGTCC------GA
CGGCGGCCCCGCTATGATGGCGCTCATGCTGCGGCGACCCAGAGATCCTCCTCTGCTATATGGTCAGTG-----CCCGTA
ACCCTAACCCTCGATGCTACTCTT---------TTTTCTCCAAT--TTAGGCCGAATCCATGGTAGATTTTGACCGAAT-
CCTTGTAATCTAGGACTACAAGAGGAACTTTCCACCGTAGAAATAAACTATGATGGATTTTTTA--CGGATTTGGCAAGT
CGAAGACATATGTTGATGGCAAAGTTG--CTCTTTG------ATGGTTGTGAAGTATATACATGGTCTCCTCTCTCGC-C
ACTGATTTTATGCGGCAATTAG-GATATAGTGACCAACCAAAGATTGTTTTGCACTGGTTGCTTCCTAGAAATATTCTAG
A-TGATGGACTCCTAATTATGGATTGTGACACTGACACATTGCACATGGCAGCACTTGTTCCAAAGTTCCGGTATTTTCA
GCTGTTTATGGACCACAAAGATATGACATTTGACAATGTAATTGA
>chr7A_545
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------GATCCAGTGATTGATCATTTCGCCTGGTGCATTTAGTTTGCTCTACCGTGGAGAAACTGAAGTACTCCTAG
CATGCAAATTCCGCCAGTTCCGTGTCAGCACAGCGAGGCCTTCCCCCTCCCTTCTTCCCTCGATGGATGAAGCAGTTACG
TTACGTTTGCAACGCGACGCCATCCATGTTGACATGTTGCCTCTTCCTTGACGCCTTCCACAAACCGAGGTACCCAACCC
TCCCTACTCGACACTGGCAGCCTAAGCAAACGCGAAGGCACGCAAGAACCAGCCATCCAGCAATACAAAACCACCACCAC
CCCGCAAGCACGCACAAAACGCCTAGCCCTC-CTCCATCAAGAATCCTCTGCGCACGTTCCTTCGTCTCGCACATGCATC
TCTAGCTGGCTAGCTAGTTTATTTGATTACAAATATCCATCCAGATCCAATCCAATCACGCACAACAATCGATCATGGCA
GCTGCTCCTTCTGCCTCTGCCGTTTCCGTCAGGCAGAGGACTGCCGCGGCAGCATCGCCGCTGCTCCAGGATCAGCAGCA
AGAAAAGCATGAAGCTGTTGATCCGGTGCCACCGCCGCCGCCG------CGATCGACGCTGTACCAGGCGCTGACGTCGA
CGGCGAGCCTGGCCAACCTGCTCCCCACGGGCACGGTGCTGGCTTTCCAGCTGCTCGCGCCGACCTTCACCAACCACGGC
GCCTGCGACGCCACCACGGCGCTGCTCACGCGGATCCTCCTCGCCGTCCTCGCGCTCTCCTGCCTCCTCGCCTCCTTCAC
CGACTCCCTCAAGGGCCCCGACGGCCGCGTCTACTACGGCGTCGCCACCCTCAGGGGCCTCTGGCTGCTCGACTACCCGC
CCGGCGCGCCCACGCCGCCGGACACGTCCAGGTACAGGCTGGCACCAATCGACGCCGTGCACGCGGCGCTGTCGGTGGCC
GTGTTCGGGGTGGTGGCGGCCAGAGACAAGAACGTTGTGCGGTGCTTCTACGGCCCGTCGCCGGCGAGAGAGACGGAGCA
GGTGCTGGACATCGTGCCGCTCGGCGTCGGCGTGCTCTGCAGCTTGCTCTTCGTCGCGTTCCCCACCAGGCGGCACGGCA
TCGGCTACCCTGTCACCAACGGCGCCGCTGGCAGCAGCACCTGAATAAACTAAACTTACCCGCGTATTACAAAGCTCAAG
AATTACTCTGGTTACACTAGTACTCCTACTAACTTAAGAGCATTGTATCATTCTATCATTTCGATTTCTTGCTTATTTGC
CTGTGGGATGTAAACGATCCGACGATATATTCTACACACAAAAGATCTGTTATCTTCCAACTCCTTTTGTGGGTATTATT
CTCCATTTAATGATGAGTAAAATGCATGCATGTTTCTATTTTTCAGAGTGTCGATCCGGTCCTAATTC-TTTCAAAATGC
ATGCC--TGCTA-CTAAATCTTTTTAAGTTGTTCATCCGATCTCTTAATTCCGTCCGACCACCGCTGACCAGCTTG-ATG
GTGCTTTGACCGCCGCCACGTGGATTG--AAGGGCAAAGGCTGGATTACGACGTGT--TACATATTTGCAAAAGAACCCT
CGAACCCTAATTCCTTCTCAGA------CGCAGTC--CTTTCCTCCTCCACACCCC---TCTCTG-----------GCGA
AACAGGGGCGGTTGATGGCAAAGGCGCTGCTTCGATAAGAAG----AGGC-GGTCATCGCAGGCGGTTGTGC------GG
CGGCGGCCCCGCTAGGATGGCGCTCATGCTGCGGCGACCCGGAGATCCTCCTC-ACGACATGGTCAATG-----CCCGTA
ACCCTAACACTTGATGCTACTCTTTCATTCCTCTTTTTTCCGAT--TTAGGCCAAATCCATGGTAGATGTTGACCGAAT-
CCTTGTAATCTAGGACTACAAGAGGAGCTTTTCACCGTAGAAATAAACTATGCTGGATTTTTTTTGCGGATTTGGCAAGT
CGGAGACATATGTTAATGGCAAAGTTGCTCCGTTTG------ATGGTTGTGAATTAGATACATGGTCTCCTCTCTGG-TC
ACTGATTTTATGCAACAATTAG-GATAT---GACCAATCAAAGATCGTTTTGCACTGGTTGCTCCTTGGAAAGAATCTAG
A-TGATGGACTCTTGATTATGGACTATGACACTGACACATTGCACATGGCAGCGGTTGTTCCAAAGTTTCAGTATTTTAA
GTTGTTTGTGGACCACAAAGATATGACATTTGACAATGTAATTGA
>chr6B_1878
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------AGTGTCGACTGGGTCCTAATTC-TTTCAAAATGC
ACATC--TGGGTCCTAAATCTTTTTAAGTTGTTCACCCGAGGTCCTAATTTCGTCTGACGGCTGCTGACCAGCTCGCGTG
GCGCTTTGACCGCTGCCACGTCGACTC--GAGGGCCCACGCGGGATAACGACCAGCCATGTATTTTTTCAAAAGAGCCCC
CCAACCCTAATCTCTCCACAACCATAGTCCCTTTC--CTCTCCTCTTCCCCACCTC---TCTCTG----CT--CTGGCGA
AACAGGGGAGATCGACGGTGGCGGT------CCGGTGAGAAGAGGCAGGC-GGCCATCGTAGGCGCTTGTCT------GG
CGGCGGCGCCGCTAGGATGGCGCCCGTGCATCGGCTACCCGGAGATCCTCCTCCATGATACGGTCAGTGTGTTGCCCATA
ACCCTAACCCTCAATCCTC-----TTTTTCCACGGATTT-CGAT--TTAGTTCGAATCGATGGTAGTATTTGACTGAATC
CCTCGATACCTAGGAGCACAAGAGGAGGTTTTTACCGTAGAAATCAACTATGGTGGA-TTTTTCTGCGGATTTGGCCGAT
CGAAGACGTATGGCGATGGGAAAGTTGCTCTGTTCG------ATGGTTGCAAAGTAGATACATGGTCTCCTCTCTGGCTC
ACTGATTTTATGCAACAACTGG-GATATAGTGACCAATCTAAGAATGTTATTTACTGGTTACTGCCTGCAAAGAATTTAG
C-CGATGGACTGCGGATTGTGGACTGTGACACTGACACTTTGCACATGACAGCAGTTGTTCCAAAATTCCAGTACTTTCA
GTTGTTTGTTGATCACAAAGACATGGCCTTTGACAATGTAATGGA
>chr3A_1887
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------GCGGTCCTAATTC-TTTTCTAAAAG
TGTTGATTGGGTCCCAAATCTTTTTAAGTTGTTCATCCAAGGTCCTAATCTCGTCTGCACCCCGCTAACCAGCTTACGTG
GCGCTTTGACCA-GGCCACGTCGACAGCAGAGGGCCCAGGTGGGATAACGACCGGCCGTGAATATTTGTAGAAAAACCCT
CTAACCCTAATTCCCTTTCAT------TCGTGGCC--CGTTCCTCTTCCCCACCCC---TCTCCTCTCCCTCTCTGGCAA
AAACAGGGCGATTGA------CGGCGCTGCTCCGGTGAGAAG----AGGG-G-CCGTTGCCGGCTGTCGTCC------GG
CGACGGCAGCGCTAGGATGGCGCCACATCTGCGGCGACCCGGAGATCCTCCTCCGTGATATGGTAAGTG-----CTCGTA
ACCCTAATCC-CAATCCTACTGTTTCGTCCCCCTTCTTC-TCAT--TTAGGCTGAATCAA----------TGACCGAATC
CCTTGCAATCTAGGACCACAAGAGGAGCTTTTCAGTCTAGAAATAAACTATGATG----TTTTTTGCGGATTTGGCAAGT
CCAAGTCATATGTTGATGGCAAAGATGATGTGTTTG------ATGGATGTGAAGTAGATACATGGTCTCCTCTCTGGCTC
ACTGATTTTATGCAACAATTAG-GATATAGTGACCAATCGAACTTCACTTTGTATTGGTTGCTCCCTGGAAAGAATCTAG
C-TGATGGTCTTCGGATTGTGGACTGCGACACTGACACATTGCACATGACAGCAATTGTCCCAAAAATTTAGTATTTCCA
GTTGTTTGTCAACCATAAAGATATGACATTTGACAATGTAATTG-
>chr7D_1889
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------GGTCCTAATTC-TTTTAAAATGC
ATATC--TGAGTCCCAAATCTTTTTAAGTTGTTCACGCAAGGTCCTAATCCCGTCTGACCGCCGCTGACCAGCTCGCGTG
GCACTTTGACCA-GTCCACGTCGACACCAGAGGGCCC-GGGGGGATAACGACCGGCCATGAATATTTGCAGAAAAACCCT
CTAACCCTAATTCCCTTTCAT------TCGCGGCCCCCCTTCCTCTTCCCCACCCT---CTCCCTCTCCCTGTCTGGAGA
AAACAGGGCGATTGACGGCGGCAGCTCTGCTCCAGTGAGAAA----AGGG-TGGCGGCGGCGGCTGTTGTCCGGTGAGGG
CGACGGCGATGCTAGGATGGCGCCACATCTACGGTGACCCGGAGATCCTCCTCCGCGATATGGTAATTT-----CTCGTA
ACCCTAATCC-CGATCCTACTGTTTAGTTCCCCTTCTTC-TTCTCATTAGGCAGAATCAA----------TGACCGAATC
CTTTGCAATCTAGGACCACAAGAGGAGCTTTTCAGTGTAGAAATCAATTATGATGGG-TTTTTTTGCGGATTCGGCAAGT
CGAAGTCATATGTCGATGGCAAAGATGTTGTGTTTG------ATGGATGTGAAGTAGATACATGGTCTCCTCTCTGGCTC
ACTGATTTTATGCAACAATTAG-GATATAGTGACCAATCGAACTACATTTTGTATTGGTTGCTCCCTGGAAAGAATCTAG
C-TGATGGTCTCCGGATTGTGGACTGTGACACTGACACATTGCACATGACAGCAGTTGTCCCAAAATTTCAGTATTTTCA
GTTGTTTGTCGACCAAAAAGATATGACATTTGACAATGCAATTGA
>chr5A_1901
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------TTTCAAAATGC
ACATC--CGAGTCCTAATTGTCTTTAAGTTATTCATCTGAGGTCCTAATTTCATCTGACCACCGTGGCCCGGCTTGTGTG
GCGCTTTGACCCTGGCCACATCAATAG--GAGGGCATGTGTGGGATAACGACTGGTAGTGCATTCTTGTGAAAGAACCCT
CAAACCCTAATGCCTTCTCGG------TTGCGATC--CTTTTCTTTTCCCCACCTC---TCTAGCG------------AA
AACAGGGGCGATCGATGGCGGAGGTGCTGCTCTGGTGAGAAG----AGGTCG-TCATTGCAGCTGGTTTTCC------GA
TGGCGGCGCAACTAAGATGGTGCCACAGCTGTGGCAACCCGGAGATCCTCATCCATGCCATGGTCAGTG-----CCCGTA
ACCCTTACCCTCGATGCTACTCTTTTGTTACTCTTACTC-CGAT--TTAGACCGAATCCA----------TGACCGAATC
CCTTGTAATCTAGGACCACAAGAGGAATATTTCTCCATAGAAATAAACTATGCTGAA-TTATTTTGTGGATTTGGCAAGT
CGAAGTCATATGTTGATGCCAAAGCTGCTTTGTTCGATGGATATGGATGTGAAGTAGATACATGGTCTCCTCTCCGACTC
GCTAATTTCACGCGACAATTTATGATATAGTGACCAATCAAACATCACTTTATACTTGTTGCTCCCTGGAAAGAATCTAG
A-TGATGGACTCCGGATTGTGGACTGTGACAATGACACATTGCACATGACAACCATTGTTCCAAAATTTCAGTATTTTCA
GTTGTTTGTGGACCACAAAGATATGACATTTGACAATGTAATTGA
>chr3D_1901
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------TTTCAAAATGC
ATATC--TGAGTCCCAAATCTTTTTAAGTTGTTCATCCGAGGTCCTAATCCCGTCTGCCCCCCGCTAACCAGCTTGCGTG
GCGCTTTGACCA-GGCCACGTCGACAGCAGAGGGCCCAGGCGGGATAACGACCGACCGTGAATATTTGCAGAAGAACCCT
CTAACCCTAATTCCCTTTCAT------TCGCGGTC--CGTTCCTCTTCCCCCCCCCCCCTCTCCTCTCCCTCTCTAGCG-
AAAAAAGGGGATCGACGGCGGCGACGCTACTCCAGTAAGAAG----AGGG-G-TCGTTGCCGGCTATCGTCC------GG
CGACGGAGGCGCTAGGATGGCGCCACATCTGCGGCGA-CCGGAGATCCTCCTCCGCGATATGGTAAGTG-----CTCGTA
ACCCTAATCC-CAATCCTACCATTTCGTTCCCCTTCTTC-TCAT--TTAGTCTGAATCAA----------TGACCGAAT-
CCTTGAAATCTAGGACCACAAGAGGAGCTTTTCAGTGTAGAAATAAACTATGATG--TTTTTTTTGCGGATTTGGCAAGT
CCAAATCATATGTTGATGGCAAAGATGCTGTGTTCA------ATGGATGTGAAGTAGATACATGGTCTCCTCTCAGGCTC
ACTGATTTTATGCAACAATTAG-TGTATAGTGACCAATCGAACTTCACTTTGTATTAGTTGCTCCCTGGAAAGAATCTAG
C-TGATGGTCTTTGGATTGTGGACTGCGATACTGACACATTACACATGACAACAGTTGTCCCAAAATTTTAGTATTTTCA
GTTGTTTGTCGATCATAAAGATATGACATTTGACAATGTAATTGA
>chr3B_1974
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------CTGACCAGCTTGCATG
GCGCTTTGACCA-GGCCACGTCGACAGCAGAGGGCCCAGGCGGGATAACGACCGGCCGTGAATATTTGCAGAAAAACCCT
CTAACCCTAGTTCCCTTTCAT------TCGCGGTC--TGTTCCTCTTCCCCACCCC---TCTCCTCTCCCT--TTGGCGA
AAACAGGGCGATCGACGGTGGCGGCGCTGCTCCGGTGAGAAG----AGGG-G-TCGTTGCCGGCTATCGTCC------GG
CGACGGCGGCGCTAGGATGGCGCCACATCTGCGGCAACCTGGAGATCCTCCTCAGCGATATGGTAAGTG-----CTCGTA
ACCCTAATCC-CAATCCTACTGTTTTGTTCCCCTTCT----CAT--TTAGGCTGAATCAA----------TGACCGGATC
CCTTGCAATCTAGGACCACGAGAGGAGCTTTTCAATGTAGAAATAAACTATGATG--TTTTTTTTGCGGATTTGGCAAGT
CCAAGTCATATGTTGATGGCAAAGATGATGTGTTCG------GTGGATGTGAAGTAGATACATGGTCTCCTCTCTGGCTC
ACTGATTTTATGCAACAATTAG-GATATAGTGATCAATCGAACTTCACTTTGTATTGGTTGCTCCCTGGAAAGAATCTAA
GTTGATGGTCTCCGGATTGTGGACTGTGACACTGACACATTGCACATGACAGCAGTTGTCCCAAAATTTCAGTATTTTCA
GTTGTTTGTCGACCATAAAGATATGACATTTGACAATGTAATTGA
>SNPs
SS-SS-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSS--------------------------S-------------SS-------------
------S--------------------------S-------SSSSSSSSSSS---------------------------S
-----------S------------SSSSSSSSSSSSSS----------------------------------S-----S-
-------------SS--------------S---------------S------------------------------S---
----------------------------------------------------------------------S---------
-----------S--------------------------------------------------------S-----------
----------------------------------------------------------SS--------------------
-------------------------S------------------------------------------------------
-------S----------SS------------------------------S---S----S-----S--------------
----------------------------------------S-----------------S---------------------
---------------S--S------------------------SSSSSS-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------S------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------S----------------------------------------------------
--------------------------------------------------------------------------------
---------------------------S------S--S---------------------S--------S-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------S----------------S-----------------------------------------
--------------------------------------------------------------------------------
----------------------------------S-----------------------------S---------------
---------------------------------------------------------------S----------------
------------S----------------S--------------------------------------------------
-------------S------------------------------------------------------------------
---------------------------------------------
>forward_516
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------TCTTTGCTCCAATGGCGACT--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------
>reverse_2545
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------GGCGGATTTGGCAAAT
CGAA----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------
