>input_sequence_71632
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--------------------------------------------ATGCCCTCGCCTGGTAGCTTCAGTCGGCGTAGCGGC
GACAGTTTCCTTCTGCCCCGGCCGCCGCCGGTGACGGACGTGGGCTGCGGGTGCCGCACGCCGAGGCTTCTCAGCTCCAT
CTACTCGTCGCTCATGTCCCGTGCGCGTGGAGGAGGAGGCCGTAGCACCAAGCCCAAGTCGCCGCACGCGTCGTCCACGT
CCACCGCCACCGCCTTCAGCTGCAGCACCGCGGGCGCCACCACCGCCACCACGGTCTCGTCCCTGGACGACTCGTGGGGC
CTCGCGACCTACGCCACCAACACGCTCTACGAGGACGACCCCGAGGCGAGGCGCCAGAGGCAGAGGACGACGACGAGGAC
GAGGAGGCGCAGGAGGCAGAGGAACCACGGTAGCAGCAGAAGGCCGGAGCGGGGCGTCGCGATGATGGCACGCGG---GG
AGAAGGAGGAGGAGGAGGAGGCTGCGGTGGCGGTGGAGGTGGAGTCGGCGACGCCGTACGAGGACTTCCGGGAGTCCATG
GTGGCCATGGTGGTGGAGAAGGAGATGTACGCGTGGGAGGACCTCAACGCGCTGCTCCACGGGTTCCTCTCGCTCAACTC
GCCGCGCAACCACCCGCTCATCCTCCACGCCTTCGCCGACCTCTGGGCGCCGCGCGGCGGCCTCTTCTGCCCTCCGTCCC
CGTGCCTAGGCCTCTAG---------------------------------------------------------------
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>chr1D_1_TraesCS1D01G275100
AACAGTAGAGTACTCGAGTGCGTACGTACCATCTCCCGTCTCAC-AGCAGCCGCAGCACTGTACTGCTGACCAGTCGCCG
CATTGCGCAATGATCAGCTCATGGTGCGCGTGTGAATCGTATCCGGC---------------------------------
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-------------------------------------------TCTCTCCATCTTTGACTGTACCGAGACAGATACGGAA
AGGGGAATAGCTACACCAGAGATCCTTGGTGAAAGTTAGGGGGCAATCTTACTTCGAGAAAGAACCAAAGTTAACGAGCA
ACCCGATGTTGCTGCTGCCTGCTGCTGCTGCATTGGATCATCATTGTTCATAAAAAGTCGGACAATCTCAGCC-TTTGAT
CATGAGTTGCACGTCCTGGTCTCACGGTACACTATGCATGCGCACGCAGTAACGTTCCACACTCTTTTGGGTTCCTTGCG
AACAGCGCG--TAGTAAGAT--------CTCGCCGAGAAAAACAAATGTTTTCTTGAATGCATTCTCTTTTTTGAGAGGC
TTGAATGCACGATTGGAGGTACTGTGCCAGTGAA-------TAGCTCAGCTAGCGTCGTGTCCTCACTTGCGTGCCGAGA
GAGTCAACTCAGAGCAGGCTTTTATATTCGTACACGTACTATTCCCCCCTCGTCTGCTCGTCACATCTGCCCGGCCAGAA
TTTATTTACCGCTG------------------------------------------------------------------
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--------------------------------------------------TAATAAGAGGTGGTACCTCGTCGTGTCAAA
TCACAGCAACCATCGATGGATGGGTGCATGCATGCATGCACGCAC-----------------ACGTACCGCCCGAAGGAC
CGATTCGCTTGCTTTACTGCACCGCCATGATTCGAACTTATGCACGCTACCAAGCTATAGCTAGCTAGCCTATGATCTTA
CTACCCCCATTTACCTCTTCTTTTCATGTCACTAGCTGCTCGCGGTGATCATGGCGTGCACGCCCCCTTTACTACCCCCT
ATTTAAGCCGCTCCGTCTCTTGCGAGGAGCTCCGGTGACATATACTA--CCCCGTGTC--------------CGTCCACT
TCTCCAAGAACTCACTCGTGTAGTGTAGCCGAGCCACGATCGACATGCCCTCGCCTGGTAGCTTCAGTCGGCGTAGCGGC
GACAGTTTCCTTCTGCCCCGGCCGCCGCCGGTGACGGACGTGGGCTGCGGGTGCCGCACGCCGAGGCTTCTCAGCTCCAT
CTACTCGTCGCTCATGTCCCGTGCGCGTGGAGGAGGAGGCCGTAGCACCAAGCCCAAGTCGCCGCACGCGTCGTCCACGT
CCACCGCCACCGCCTTCAGCTGCAGCACCGCGGGCGCCACCACCGCCACCACGGTCTCGTCCCTGGACGACTCGTGGGGC
CTCGCGACCTACGCCACCAACACGCTCTACGAGGACGACCCCGAGGCGAGGCGCCAGAGGCAGAGGACGACGACGAGGAC
GAGGAGGCGCAGGAGGCAGAGGAACCACGGTAGCAGCAGAAGGCCGGAGCGGGGCGTCGCGATGATGGCACGCGG---GG
AGAAGGAGGAGGAGGAGGAGGCTGCGGTGGCGGTGGAGGTGGAGTCGGCGACGCCGTACGAGGACTTCCGGGAGTCCATG
GTGGCCATGGTGGTGGAGAAGGAGATGTACGCGTGGGAGGACCTCAACGCGCTGCTCCACGGGTTCCTCTCGCTCAACTC
GCCGCGCAACCACCCGCTCATCCTCCACGCCTTCGCCGACCTCTGGGCGCCGCGCGGCGGCCTCTTCTGCCCTCCGTCCC
CGTGCCTAGGCCTCTAGAGTCGAAGCTGCACCTGCACGCCGACATGCGCCACCTAGCTAGCTCTACCCCATTAGCGCTGG
CATATATAGCCGTAAATCTAGCTTAGGCTGGG--------------TCATACTACTGTGTACGTACGTATCTTGTACTGT
AGTTGTCGTCGTCGTTCTCGTCGTTGTTGTATTACGTGCTACTCTGCTACTCCGTAGTCCTCTAGAGCTAATGCTCAACG
GACTGCGTACTAATCTTTGTCCGTGTCCGTGTGTCGGTGCGTGCGTGCGCAAGACAAAATAAAGTATGCGATACGATGGC
ACGTCCGTGGTTCGTATGAGCTCTGTTCGTTTCTATAGATTGTTCGTTCTGAGGTGGATTCGAACCACTCCCTCCGTTTG
TATTTCGAGTCCAAAAGGCCGGCTGAAAGAGGATTTTCAGTCCTATGTCCGCTGCCAGCAATGGAAAATGGAAGTTTCTA
GGATTGCTGCTCTTTTCTGTTCAAGAAGTCTTTCTCCAGGTGTCGGCGTTCTGAAAAC-GGGGTCCTCAGACTTGCCTGC
TTGCAGTTCACGGCGTGGCTCCACAAGCGGGCCCGTACGGCCCATCTTCACCAGCAAGCACTCAAGACCCTCGCGAGA-G
CCAAGCCTCGCGAGGCGGACGACACAAGACCTCCTCAGGAACGGCCTCACCAGGCTGACTCGCGAGGGGCGGAGAGATCA
AGGCAAGGCAAACCTCGCGAGGTTCTCATGGCGTGAGCCATGACGATCAAGGCCAGGCGGGCGCCAACGCGCACAGTGTC
CTTGCTTCCTCTTTGGTGCTAAGGAGGCAAGCGCAGGTGAGGAATTCCGAGGCATCAGGCAAAGGTTTGCATATTGGTGC
AA-----C-AAGACCAGCAGGACGGCAAGACGGAGGTCACCGTGGAGCCCAAGACGGCGTCACCGCCAGAGCCTTTGGCA
GGCGAAGACTACTTTTGTCACGATAAGTTGTACTAGCTGTCCCCTTTCAAATTGGCCGTTGTTGGCTCCCTTCCCGCTC
>chr1A_3
CAGTAGAG-GTACTCGAGTGCGTACCTAGCATCTCCCGTCTCACAAGCAGCCGCAGCACTGTACTGCTGACCAGTCGCCG
CATTGCGCAATGATCAGCTCATGGTGCGCGTGTGAATCGTATCCGACTCTCTCCATATTTTTTTTCAAGGGATGCGTCAA
GGTTGACGCATCAGGATCATAGATAGAGAAAGTGGCCAGAAGAAAAAGCCATTGTTGTTAGTACAACCTTACGGGTGCTA
GAGCCCTAAAGAATCCACATGCGGATTACTCGCTCTCGTCCTTCCTATCTACCATACAAATGACTGAGCCACGTTCACGC
AGCAGGCCAGCCGCTCTCCAATCCTGAGACTCTAACTCGATCTTAACAAGAAGTTCGTCCACAGATGGTGACGCGCCATT
GAAAACAATGTCGTTTCGGTGCTTCCATAGCATCCATAACACCAGGGTTATCACCGTCCACGCCTCCTTCCTGAATTGAT
TTTGGGGGTTGAGAGTAGTCCACCATTCGACAAGCTTTGAATCTGCGGACGGCGTCCAGTCCGGCCTACTCAATGTGTTC
ATGACCTTGGTCCATACCTGCCTTGCTAGAACACATCCGAGAAGCAAATGGTCCAAGGTCTCAGGCAGCTGATCACAGAA
TGGGCATGCCGATGGGTGCGGCAACTGCCGTCGCTGAAGTCTATCTGCTGTCCAACATCGGTTCCGTGTCGCGAGCCACG
TGAAAAACTTGCAAGCAGGGAGGGCCTGCATCTCCATACTTGCACTGCTCCCGCGCTCTCTATGCGGCCCGCAAAGTGGG
CACGATATGCCGATCGCGTAGAAAATGTTCCTGAGCTCTCCCAAGTCCAGGCAATGGCATCCTCAATGCCCGGTCGCAGT
TCAACATGTTGGGTTAGGTCCACCGGCGCCATGAACTCGAACAAGGCCTGCGTTCCCATGTCCGGGGACATATCTTGCCA
CCATCCAGCGGTGAGGGCCTTCTTGACTGTGATCTTCCGCCCATGCTTCTTTACCATAGCATAGAGGTGTGGCATGGTGT
CCTCGATGCGGCCATCAGAGAGCCACCAATCTGTCCAAAATCGGGCCATCTCCCCATCTCCAAGCGTGCACCTTGTCGCT
GCCTTGTATATTCCCATCGATTCATCGGATACTTGTATGTTAAACTCACTCCACGGCCTGGTGGAGTCGGTCCTCTGTAA
CCATGGCCATCGTGCCCTAAGTGCAGAGTTCAGGTAGCGTAAGTTCGGAACACCGAGGCCGCCATGCTCCTTGGGCGAGC
AAACTTGGTTCCATGCAATGATGCAGTGTCCTCCATTCACCTCGCGTCGCCCTTTCCATAGGAAACCACGGCAAATCTTG
TTCGCGGCAGTAATAGTTTTGATTGGCAGGTCAAGTGCCATCATCGCGTGAATCGGCATGGACATCGAGGTAGATCTAAG
CAGCTCGAGTCGTCCATCCCGATAAAGCAGTCTCGCCTGCCAAGCAGGTAGCTTGTCAGCCATCTTGTCAACCATGTACT
GGAGCTGAGCTGCCGTGATCTTACGTAGCCCCAAAGGCAGCCCAAGGTATTTACACGGCCAGCCCAACACCTGGCACTCC
ATCTCAGCTGCGATCAACTGCTTCTGCTCGTCGGAGCATCTTATTGGGTGGGCGGAGCACTTTGTCAGGTTAGTGCTGAG
ACCGGATGCAACACCAAAGTCATACAGCAACGCAGCACACGCCCTGAGACTTTGCACATCCGGCTTAATGAACGTGATCA
CGTCATCCGCATAGATGGAGGTGCACTTCCGAACGCCGGTGGTCGCAAGAGGCGTCAGAATCCCTGCCGCCATGGCCTTG
TAGAACATACGTTGCAGCCCCTCCATGACAAGGACAAACAAGAGGGGAGAGACCGGATCTCCTTGCCGCAAACCTTGTCG
ATTTTAAATGACCTCTCCCGGAACGCCATTGAGTAGCACTCTAGTGGAGGACGAAGCTAGAAGGCCAGAGATCCATGCCA
TCCATTTATTGCCGAATCCCATGTGTCGGAGGATCTCCAGAAGGAATGCCCAGTGCACGGTGTTGAAGGCTTTTGTAATG
TCAAGCTTAAGCATCACGGCCTCTCGCCTCGCCGCGTGAAGCTTTCTGGCCAACCCTTGCACCATCATGTAATTATCATG
CAACCATCTTCCTTGAATAAAAGCACCTTGGTGCGTTCCGACCAACTCTGGGACGTCCGGGGCCACACGTGTTGCCAACA
CCTTGGCAACAAGTTTCGGGAAACTACGGATCAAGCTGATGGGGCGAAACTCGCGGATCTCCATGGCTGCAGGCGTTTTG
GGCAGGAGAGTAATAAGAGCCTGGTTAATGGACGTGAGGCCGCGGAAATCCATCCTGCCAAAAGTCTGGAAGGCCGCCAT
GACATCATCTTTTATGATCTGCCAGCAGCTCAAGTAAAACCGTGCTGGAAAGCCATCAGGCCCTGGCGCCTTGTCAAGCT
CCTGAGCATGAATGGCTGTCCAGATCTCCTCCTCAGTGAACTCAATTTCAAGGTGACTCTTGTCCTTGCGGGGCAGCCCT
AGCTCATCCAAATCGAGTGTGAACTCCCGGTCTGTGGTGTCTCCAAGCAGGTTAGAGAAGAAAGAATCGACAACCTCTGC
CATAGACTCATGGTCAGTCGTAACCACGCCATCCACTTTGAGCTTGGTAATGAAATTCTTGCGCCTCCTATTGCTTGCAT
GCGCATGGAAGAACTGTGTGCACGCGTCCCCTTCCCGCAAGAAAAGAATCCGGGATCTCTGGCGGGCAATCGTCCGTTCG
AGGGAGGCCAGCCCAAGCAACTTGCCTTTTAGCAACCTCCGCAGCCCGATTTCATCATGAGATAAAGCACGGCTCTCCAT
GGCGACATCTAACCGAAGAATGACCTCATTCGCAATGCGAATTTGCTGCTTGACACTTCCCACATACTTGCTGCTCCAGC
GTGAAAGATGTTTGGCAGTTGTCCTAAGCTTGGCCGCCAATCGTTTGTACGGGTTTTGTATGAATGGTTGACTGCCCCAC
GCTTGTCTGACCACGTCTTGGAAGCCCTCAATTCTCGTCCAGAAAGCCTCAAAGTGGAAGCGCCTCCCCCGTGGTAGGTT
TGCCTCAAGTACCAGATGTAATGGGCAATGATCTGATGTGCTGGTACTGAGCGCAGAGAGGAAAGATGCAGGGTGCATCG
CCTCCCACTCCACCGAAACGAAAACCCGATCAAGCTTTTCGAGAGTGGCCTCCCTCCGTTCATTAGACCAAGTGTATCTA
CGGCCATTGAGATAGAGCTCCTTCATGTCGAGGTCCGAAATGCATCTCCTAAAGCGGCCCATCATCCGACGATTGATCCT
GTCATTGCTCTTGTCCGATGGGTCCAAGATGAGATTGAAGTCGCCGGCAAGCATCCAGGGGCCTGCATGCAATTCTCTGA
CATCCTTAAGCTCTTGCATGAAAAGCACTTTGTCCGTATCCTCCTGGGGTCCATAGACTCCAGTTAACCACCAACCGGGT
GACCCCTGGAACTGCACCCACGCCGTGGCCGTGTTTTGCGTGATGTGTGGATTTGTCAACTGCGCACATGCAGATTTGGC
TGCCAATAGGACGCCACCACAAGTGCCAATCGCTGGCACGTAAAAGAACACATCAAAGGCCGGGCCAAGACATTGCCGCA
CCACCATTATGTTTACGTCTTGGAGTTTCGTTTCCTGAAGACAAACTACACTCGCGCCCGAGCTCGAAATGACGTTATTT
ATTGCATTGCGTTTTGCCGGGCTATTCAAGCCGCGTACATTCCACATCACTATCACTTGACTTGGGTCAGCCATAGAAAA
AGGCCTACAAGCAAGCTACAACAGGTGCACACACTAAAGTGTGTCACACTCCATCCCTTTGCCAAGCGGCAGCACATCCG
CCTGCCACCCAAAGAGTCCAACGATTGCCGTAATGTGTGACTGTCTCTCCATCTTTGACTGTACCGAGACAGATACGGAA
AGGGGAATTGCTACACCAGAGATCCTTGGTGAAAGTTAGGGGGCAATCTTACTTCGAGAAAGAACCAAAGCTAGCGAGCA
ACCCGATAT----------TGCTGCTCCTGCATTGGATCATCATGGTTCATAAAAAGTCGGACAATCTCACCCTTTTGAT
CATGAGTTGCACGTCCTGAC--CACGGTACACTATGCATGCGCACGCAGTAACGTTGCAGT-------------------
------GCG--TAGTAAGAAATTTCTTACTCGCGGAGAAAAACAAATGTCTTCTTGAATGCATTTTTTTTA-----AGGC
TTGAATGCATGATTGAAGGTACTGTAGCCAGTGAATAGCTCAGCT--AGCTAGCGTCGTGTCGTCACTTGCGTGCCGAGA
GAGTCAACTCAGAGCAGGCTTTTATATTCGTACACGTACTATTCCCG-CTCGTCTGCTCGTCACCTTTGCCCGGCCAGAA
TTTATTTACCGCTG------------------------------------------------------------------
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--------------------------------------------------TAATAAGAGGTGGTACCTCGACGCGTCAAA
TCACCGCAACCATCGATGGATGGGTGCATGCATGCACGCACGCAC-----------------ACGTACCGCCCGAACGAT
CGATTCGCTTGCTTCACTGCACCGCCATGATTCGAACTTATGCACGCTACCAGGCTA--GCTAGCTAGCCTATGATCTTA
C---CCCCATTTACCTCCTCTTTTCATGTCACTAGCTGCTCGCGGTGATCATGGCGTGCACGCTCCCTT---TACCCCCT
ATTTAAGCCGCTCGGTCTCTTGCGAGGAGCTCCGGTGACATATACTA--CCCCGTGTCCGTGTGTGCGTGCGCGTCCACT
TCTCCAAGAACTCACTCGTGTAGTGTAGTCGAGCCACGATCACCATGCCCTCGCCTGGTGGCTTCAGTCGGCGTAGCGGC
GACAGTTTCCTGCTGCCCCGGCCGCCGCCGGTGACGGACGTGGGCTGCGGGTGCCGCACGCCGAGGCTTCTCAGTTCCAT
CTACTCGTCGCTCATGTCCCGGGCGCGCGGAGGGGGAGGCCGTGGCACCAAGCCCAAGTCGCCGCACGCGTCGTCCTCGT
CCACCGCCACCGCCTTCACCTCCAGCACCGCGGGCGCCACCACCGCCACCACGGCGTCGTCCCTGGACGACTCGTGGGGC
CTCGCGACCTACGCCACCAACATGCTCTACGAGGACGACCCGGAGGCGAGGCGCCAGAAGCAGAGGACCACGACGAGGAC
GAGGAGGCGCAGGAGGCAGAGGAACCACGGTAGCGGCAGAAGGCCGGAGAGGGGCGTGGCGGTGATGGCGCGCGGGGAGG
AGGTGGAGGAGGA---GGAGGCTGCGGTGGCGGTGGAGGTGGAGTCGGCGACGCCGTACGAGGACTTCCGGGAGTCCATG
GTGGCCATGGTGGTGGAGAAGGAGATGTACGCGTGGGAGGACCTCAACGCGCTCCTCCACGGCTTCCTCTCGCTCAACTC
GCCGCGCAACCACCCGCTCATCCTCCACGCCTTCGCCGACCTCTGGGCGCCGCGCGGCGGCCTCTTCTGCCCTCCGTCAC
CGTGCCTAGGCCTCTAGAGTGGAGG------CTCCGCGCCGTCATGCGCCACCTAGCTAGCTATACTCCATTAGCGCTGG
CATATATAGCCGTAAATCTAGCTTAGGCTCTCGATGGGTCATACTACTGTATTACGTAC--------TATCTTGTACTGT
AGTTGTCGTCGTCGTCCTCGTCGTTGTTGTACGTGCTACTCTGCTACTACTCCGTAGTCCTCTAGAGCTAATGCTCAACG
GACTGCGTATTAATCTTTGTGTAATGATGATGC---GTGCGTGCGTACGCAAGACAAAATAAAGTATGCCATACGATGGC
ACGTCCGTGGTTCGTATGAGCTCTGTTCGTTTCTATAGA-----------------------------------------
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>chr1B_3
--CAGTAGAGTACTCGAGTGCGTACCT--CATCTCCCGTCTCAC-AGCAGCCGCAGCACTGTATTGCTGACCAGTCGCCG
CATTGCGCAATGATCAGCTCATGGTGCGCGTGTGAATCGTATCCGGC---------------------------------
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-------------------------------------------TCTCTCCATCTTTGACTGTACCGAAACAGATACGGAG
AGGGGAATAGCTACAACAGAGATCCTTGGTGAAAGTTAGGGGGCAATCTTACTTCGAGAAAGAACCAAAGTTAACGAGCA
ACCCGATGTTGCTGCTGCCTGCTGCTGCTGCATTGGATCATCATGGTTCATAAAAAGCCGGACAATCTCACCCTTTTGAT
CATGAGTTGCACGTCCTGA--TCACGGTACACTATGCATGCGCACGCAGTAACGATCCAGT-------------------
------GCGTATAGTAAGAAATTTCTTACTCGCGGAGAAAAACAAATGTTTTCTTGAATGCATTTTTTTTTTGA------
---AAGGCTTGATTGAAGGTACTGTAACCAGTAAATACTAGTAGCTCAGCTAGCGTCGTGTCCTCACTTGCGTGCCGAGA
TAGTCAACTCAGAGCAGGCTTTTATATTCGTACACGTACTATTCCCCCCTCGTCTGCTCGTCACCTCTGCCCGGCCAGAA
TTTATTTACCTCTGTAAGGCTGGTCATAGTGGGGAGTAACTTAGACTAGTAACATACATATGTTACTAGTCTATGTTACT
ACCTTCATAGTGGATAGTGTCATAGGTGTGGTAACATAGTTGCCTTCATTTATTACTTTGTAGACTCATTATGCATTGGA
AACCGCTATGTGATGGTAACATATTATGTTACTCTATTTGCCTCTCTCCTCATTAACTACTTGCCACATCACCATTTTTG
CTTATGTGGCATCTATGTTACTACCTATGTTACTCCCACTATGACCAGCCTAATAAGAGGTGGTACCTCGACGCGTCAAA
TCACAGCAACCATCGATGGATGGGTGCGTGCGTGCGTGCATGCACGCACACGTACCTGCAACACGTACCGCCCGAACGAT
CGATTCGCTCGCTTTACTGCACCACCATGATTCGAACTTATGCACGCTACCAAGCTA--GCTAGAG--------------
-------------------------------CTAGCTGCTCGCGGTGATCATGGCGTGCACGCCCCCTTTACT---CCCT
ATTTAAGCCGCTCGGTCTCTTGCGAGGAGCTCCGGTGACATATACTATACCCCGTGTCCGTGTGTGCGTGCGCGTCCACT
TCTCCAAGAACTCACTCGTGTAGTGTAGCCGAGCCACGATCACCATGCCCTCACCTGGTAGCTTCAGTCGGCGTAGCGGC
GACAGTTTCCTGCTGCCCCGGCCGCCGCCGGTGACGGACGTGGGCTGCGGGTGCCGCACGCCGAGGCTTCTCAGCTCCAT
CTACTCGTCGCTCATGTCCCGGGCGCGCGGAGGAGGAGGCCGTGGCACCAAGCCCAAGTCGCCGCATGCGTCGTCCACGT
CCACCGCCACCGCCTTCACCTCCAGCACCGCGGGCGCCACCACCGCCACCACGGTCTCGTCCCTGGACGACTCGTGGGGC
CTGGCGACCTATGCCACCAACACGCTCTACGAGGACGACCCGGGGGCGAGGCGCCAGCGGCGGAG------GACGGGGAC
GAGGAGGCACAGGAGGCAGAGGAACCACGCTAGCAGCAGAAGGCCGGAGAGGGGCGTCGCGATGATGGCGCGCGG---GG
AGGAGGAGGAGGA---GGAGGCTGCGGTGGCGGTGGAGGTGGAGTCGGCGACGCCGTACGAGGACTTCCGGGAGTCCATG
GTGGCCATGGTGGTGGAGAAGGAGATGTACGCGTGGGAGGACCTCAACGCGCTGCTCCACGGGTTCCTCTCGCTCAACTC
GCCGCGCAACCACCCGCTCATCCTCCACGCCTTCGCCGACCTCTGGGCGCCGCGCGGCGGCCTCTTCTGCCCTCCGTCCC
CGTGCCTAGGCCTCTAGAGCGGAGG------CTGCGCGCCGTCATGCGCCACCTAGCTAGCTATACTCCATTAGCGCTGG
CATATATAGCCGTAGATCTAGCTTAGGCTCTCGGTGGGTCATACACTCATACTACTGCATTACT---TATCTTGTACTGT
AGTTGTCGTCGTCGTCCTCGTCGTTGTTGTACCTGCTACTACTCTGCTACTCCGTAGTCCTCTAGAGCTAATGCTCAACG
GACTGCGTACTAATCTTTTTGTA---ATGATGC---GTGCGTGCGTGCGCAAGACAAAATAAAGTATGCGACACGATGGC
ACGTCCGTCTTTCCTATGAACTCTGTTCGTCTCTGTAGA-----------------------------------------
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>chr1D_2180
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----------------------------------------TGTCGGCGTTCTGGGAATGGGGGTCCCCAGT-TTGCCTGC
CTGCGGCCCACGGCGTGGCTCCACCAGCGGGCCCGTACGGCCCATCTTCACCAGCAAGCACTCAAGACCCTCACGAGGGG
CCAAGCCTCGCGAGGCGGACGATACAAGACCTCCTCAGGAGCAGCCTCACCAGGCTGGCTCGCGAGAGGCGGAGAGATCA
AGGCAAGGCAAACCTCGCGAGGTTCTCATGACATGAGCCATGACGACCAAGGCCAGGCGGGCGCCAGCGCGCACAGTGTC
CTTGCTTCCTCTTTGGTGCTAAGGAGGCAAGCGCAGGCGAGGAGTTCCGAGGCATCAGGCAAAGGTTTCCATATCGGTGC
AATGAGAC-AAGACCAGCAGGACGGCAAGACGGAGGTCACCGTGGAGCCCAAGACGGCGTCACCACCAGAGCCTTTGGCA
GGCGAAGACTACTTTTGTCAGGATAAGCTGTACTAGATGTCCCCTTTCAAATTGGCCGTTGTTGGCTCCCTTCCCGCTC
>chr7D_2180
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----------------------------------------TGTCGGTGTTCTGGGAACGGGGGTCCCCAGACTTGCATGC
CTGCGGCACACGGCGTGGCTCCACAAGCGGGCTCGTACGGCCCATCTTCACCAGCAAGCACTCAAGACCCTCGCGAGGGG
CCAAGCCTCGCGAGGCGGACGACACAAGACCTCCTCAGGAGCGGCCTCACCAGGTTGGCTCGTGAGGGGCGGAGAGATCA
AGGCAAGGCAAACCTCGCGAGGTTCTCATGACGTGAGCCATGACGACCAAGGCCAGGCGGGCGCCAGCGCGCACAGTGTC
CTTGCTTCCTCTTTGGTGCTAAGGAGGCAAGCGCAGGCGAGGAGTTCCGAGGCATCAGGAAAAGGTTTCCATATCGGTGC
AACGAGACCAAGACCAGCAGGACAGCAAGACGGAGGTCACCGTGGAGCCCAAGACGGCGTCACCACCAGAGCCTTTGGCA
GGCGAAGACTACTTTTGTCAGGATAAGCTGTACTAGCTGTCCCCTTTCAAATTGGCCGTTGTTGGCTCCCTTCCCGCTC
>chr7D_2180
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----------------------------------------TGTCGGCATTCTGGGAACAGGGGTCCCCAGACTTGCCTGC
CTGCGGCCCACGGCGTGGCTCCACAAGCGGGCCCGTACGGCCCATCTTCACCAGCAAGCACTCAAGACCCTCGCGAGGGG
CCAAGCCTCGCAAGGCGGACGACACAAGACCTCCTCAGGAGCGTCCTCACCAGGCTGGCTCGCGAGGGGCGGAGAGATCA
AGGCAAGGCAAACCTTGCGAGGTTCTCATGACGTGAGCCATGACGACTAAGGCCAGGCGGGCGCCAGCGCGCACAGTGTC
CTTGCTTCCTCTTTGGTGCTAAGGAGGCAAGCGCAGGCGAGGAGTTCCGAGGCATCAGGCAAAGGTTTCCATATCGGTGC
AATGAGACCAAGACCAGTAGGACGGCAAGATGGAGGTCACCGTGGAGCCTAAGACGGCGTCACCACCACAGCCTTTGGCA
GGCGAAGATTACTTTTGTCAGGATAAGTTGTACTAGCTATCCCCTTTCAAATTGGCCGTTGTTGGCTCCCTTCCCGCTC
>chr5D_2180
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----------------------------------------TGTCGGCGTTCTGGGAACGGGGATCCCCAGACTTGCCTGC
TTGCGGCCCACGGCGTGGCTCCACCAGCGGGCCCGTACGACCCATCTTCACCAGCAAGCACTCAAGACCCTCGCGAGGGG
CCAAGCCTCGCGAGGCGGATGACACAAGACCTCCTCGGGAGCGGCCTCACCAGGCTGGCTCGTGCGGGGCGGAGAGATCA
AGGCAAGGCAAACCTCGCGAAGTTCTCATGACGTGAGCCATGACGACCAAGGCCAGGCGGGCGCCAGCGCGCACAGTGTC
CTTGCTTCCTCTTTGGTGCTAAGGAGGCAAGCGCAGGCGAGGAGTTCCGAGGCATCAGGCAAAGGTTTCCATATCGGTGC
AACGAGACCAAGACCAGTAGGACGGCAAGACGGAGGTCACCGTGGAGCCCAAGACGGCGTCACCACCAGAGCCTTTGGCA
GGCGAAGACTACTTTTGTCAGGATAAGCTGTACTAGCTGTCCCCTTTGAAATTGGCCGTTGTTGGCTCCTTTCCCGCTC
>chr5D_2180
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----------------------------------------TGTCGGCGTTCTGGGAACGGGGGTCCCCAGACTTGCCTGC
CTGCGGCCCACGGCGTGGCTCCACCAGCGGGCCCGTACGACCCATCTTCACCAGCAAGCACTCAAGACCCTCGCGAGGGG
CCAAGCCTCGCGAGGCGGACGACACAAGACCTCCTCAAGAGCGGCCTCACCAAGCTGGCTCGCGAGGGGCGGAGAGATCA
AGGCAAGGCAAACCTCGCGAGGTTCTCATGACGTGAGCCATGACGACCAAGGCCAGGCGGGCGCCAGCGCGCAGAGTGTC
CTTGCTTCCTCTTTGGTGCTAAGGAGGCAAGCGCAGGCGAGGAGTTCCGAGGCATTAGGCAAAGGTTTCCATATCGGTGC
AACGAGATCAAGACCAGCATGACGGCAAAACGGAGGTCACCGTGGAGCCCAAGACGGCGTCACCACCAGAGCCTTTGGCA
GGCAAAGACTACTTTTGTCAGGATAAGCTGTACTGGTTGTCCCCTTTCAAATTGGCCGTTGTTGTCTCCCTTCCCGCTC
>chr4D_2180
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----------------------------------------TGTCGGCGTTCTGGGAACGGGGGTCCCCAGACTTGCCTGC
CTGCGGCCCACGGCGTGGCTCCACCAGCGGGCCCGTACGGCCCATCTTCACTAGCAAGCACTCAAGACCCTTGCGAGGGG
CCAAGCCTCGCGAGGCGGACGACACAAGACCTCCTCAGGAGCGGCCTCACCAGGCTGGCTTGCGAGGGGCGGAGAGATCA
AGGCAAGGCAAACCTCGCGAGGTTCTCATGACGTGAGCCATGACGACCAAGGCCAGGCAGGCGCCAGCGCACACAGTGTC
CTTGCTTCCTCTTTGGTGCTAAGGAGGCAAGTGCAGGCGATGAGTTCCGAGGCATCAGGCAAAGGTTTCCATATTGGTGC
AACGAGACCAAGACCAGCAGGACGGCAAGACGGAGGTCACCGTGGAGCCCAAGACGGCGTCACCACCACAGCCTTTGGCA
GGAGAAGACTACTTTTGTCAGGATAAGCTGTACTAGCAGTCCCCTTTCAATTTGGCCATTGTTGGCTCCCTTCCCGCTC
>chr4D_2180
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----------------------------------------TGTTGGCGTTCTGGGAACGGGGCTCCCCAGACTTGCCTGC
CTGCGGCCCACGGCGTGGCTCCACAAGCGGGCCCGTACGGCCCATCTTCACCAGCAAGCACTCAAGACCCTCGCGAGGGG
CCAAACCTCGCGAGGCGGACGACACAAGACCTCCTCAGGAGCGGCCTCACCAGGCTAGCTCGCGAGGGGCGGAGAGATCA
AGGCAAGGCAAACCTCCCGAGGTTCTCATGACGTGAGCCATGACGACCAAGGCCAGGCGGGCGCCAGCATACACAGTGTC
CTTGCTTCCTCTTTAGTGCAAAGGAGGCAAGCGCAGGCGAGGAGTTCCGAGGCATCAGGCAAAGGTTTCCATATCGGTGC
AACGAGACCAAGTCCAGCAGGACGGCAAGACGGAGGTCACCGTGGAGCCCAAGGCGGCGTCACCACCAGAGCCTTTGGCA
GGCGAAGACTACTTTTGTCAGGATAAGCTGTACTAGCTGTCCCCTTTCAAATGGGCCGTTGTTGGCTCCCTTCCCGCTC
>chr6D_2180
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----------------------------------------TGTCGGTGTTCTGGGAACGGGGGTCCCCAGACTTGCCTGC
CTGCGGCCCACGGCATGGCTCCACAAGCGGGCCCGTATGACCCGTCTTCACCAGCAAGCACTCAAGACCGTCGCGAGGGG
CCAAGCCTCGCGAGGCGGACGACACAAGACCTCCTCAGGAGCGGCCTCACCAGGCTGGCTCGCGAGGGGCGGAGAGATCA
AGGCAAGGCAAACCTCGCGAGGTTCTCATGACGTGAGCCATGACGACCAAGGCCAGGCGGGCGCCGGCGCGCACAGTGTC
CTTGCTTCCCCTTTGGTGCTAAGGAGGCAAGTGCAGGCGAGGAGTTCCGAGGCATCAGGCAAAGGTTTCCATATCGGTGC
AACGAGACCAAAACCAGCAGGCCGGCAAGATGGAGGTCACCGTGGAGCCCAAGACGGCGTCACCACCAGAGCCTTTGGTA
GGCGAAGACTACTTTTGTCAGGATAAGTTGTACTAGTTGTCCCCTTTCAAATTGGCCGTTGTTGGCTCCCTTCCCGCTC
>chr2D_2185
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---------------------------------------------GCGTTCTGGGAACGGCGGTCCCCAGACTTGCCTGC
CTGCGGCCCACGGCGTGCCTCCACAAGCGGGCCCGTACGGCCCATCTTCACCAACAAGCACTCAAGACCCTCGCGAGGGG
CCAAGCCTCGCGAGGCGGACGACACAAGACCTCCTCGGGAGCGGCCTCACCAGGCTGGCTCGCGAGGGGTGGAGAGATCA
AGGCAAGGCAAACCTCGCGAGGTTCTCATGACGTGAGCCATGACGACCAAGGCCAGGCGGGCGCCAGCGCGCACAGTGTC
CTTGCTTCCTCTTTGGTGCTAAGGAGGCAAGCGCAGGCGAGGAGTTCCGAGGCATCAGGCAAAGGTTTCCATATCGGTGC
AACGAGACCAAGACGAGCAGGACGGCAAGACGGAGGTCACCGTGGAGCCCAAGACGGCGTCACCACCAGAGCCTTTGGCA
GGCAAAGACTACTTTTGTCAGGATAAGCTGTACTAGCTGTCCCCTTTCAAATTGGCCGTTGTTAGCTCCCTTCCCGCTC
>SNPs
S------------------------S--S---------------------------------------------------
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--------------------------------------------S-------------------------S---------
------------------SSS--------------------------------------SSSSSSSSSSSSSSSSSSSSS
SSSSSS-------------S-------------S------------------------------S-S-----SSSS----
---------S-----S---------SS-SSSS------------------------------------------------
----------------------------------------------------------------S---------------
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----------------------------------------------------------------------S--S------
----------------------------------------------------------------------------S--S
---------------------------------------------------------SS---------------------
-SSS-------------S--------------------------------------------------------------
-------------S------------------------------------------------------------------
-----------------------------------------SS-------------------------------------
-----------S--------------------------------------------------------------------
---------------------S-----S---------------S------------------------------------
------------------S--S----------------------------------------------------------
-----------------------------------------S--------------------------S-----------
-------------------------------------------------S-------------------S----------
--S----------SSS----------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------S--S-SSSSSS----S-----S--------------------S---S-------------
-----------------------------SSS-------------------------SS-SSS-SSS-------------
---------------S---------------SSSSS-S------------------------------------------
--------------------SSSSSSSS-SSSSSSS--------------------------------------------
---------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------SS-----------S-------------
----S-SS---------------------------------------------------------------------S--
----------------------------------------S----------------S----------------------
------------------------------S---------------S-------------------S-------------
-------------------------------------S-----S------------------------S-----------
----------------------------------------------------------------S---------------
--------------------S----------------------------------------------------------
>forward_4223
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-------------------------------------------ACGCAGTAACGTTCCACACT-----------------
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-------------------------------------------------------------------------------
>reverse_6035
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----------------------------------CGTGCTACTCTGCTACTCCG--------------------------
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-------------------------------------------------------------------------------
