>input_sequence_71587
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-------------------------------ATGGCGCGCTCCAGAGTCTCGATCATGCCATCGCCGGTTCTCGTGTTGA
CCGTGGCCGTCGCCGCGCTCGTGTCGGCGTGCACGGCGGACCCGGAGCCGGTGCAGGACTTCTGCGTGGCGGCGGTCACC
AACGGCTCGGCCGACCATCCGTCGTACCCGGGGTTCCCGTGCAAGCCGGCGTCGGCGGTGGTCTCCGACGACTTCTTCTT
CGCGGGGCTGGCGCGCTCGGGCGCCGCCGACGCGGCCGAGAGCCCGTTCGGGTCCAGCGTGACGTCGGGCAACGTGGCGG
CCTTCCCGGGGCTCAACACGCTCGGCGTCTCCATCAACCGCGTCGACCTCGCCCCCGGCGGCGTCAACCCGCTGCACAGC
CACCCGCGCGCCGCCGAGCTCGTGCACGTCGTCGCCGGCCAGATGCTCGTGGGCTTTGTCAGCACCGCCGGCACTTTCTA
CTCCAAGGTGGTGCGGGAGGGGGAGAGCTTCGTCATCCCGCGCGGCATGGTGCACTTCCAGTTCAACACCGGCAAGGAGG
CCGCCAGGGCCGTCACCGTGTTCAACAGCCAGCTCCCCGGAGTTGTCCTTGCCGCGCCGTCGCTCTTTGGGGCTGACCCG
GAGATCCCCGACGCCGTCCTCTCCAAGAGCTTCCAGGTCGACGGCGAGATCATCAAGCTCCTCAAGTCCAAGTTCCGGAC
TTAA----------------------------------------------------------------------------
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>chr5D_1_TraesCS5D01G464000
GGTATATATGCTTGTGTTCCCGCAAAAAATAAAAAAAATAAACGGTATGCTTGTGTATGTGGTGAGCATTGCATGACAT-
GTGTGCGCGTGGTGCAGTTCACCTTCCAATCAATTGGAGAAGAAACAAGAAAC--CTC-TTGGCCGACCGGGTCCTCCTC
CGCTCTCCACCAACCAAAAATCTTGGTCACCCTAGCG------CGCACGTCAAGCCACTGTTGTTCGTCACTGATGGCGA
TGATGAACACGCGACCAGTCTCCAGTCGCCAAAGCACTAGGATTTGAAAGCGTCTCACAAACAAGAATCTAGATGA-TTG
TCGCCAAACACCAACCGCAGCTAACAAATTAGCTAGAGCGACCGTGGT---AAAAAAGGCGTCGATAACGCGTGCGTGGA
TTCCGTGCTCCCGGTTGGACTTTGCACCAATTAGTTTAGAAAA-ATATTCAA----AAGACATATATTTT--AATTTCAA
AAAA---AATCTTGAAACAAGTATGTCAATTAC------------------------------ATATGGTACTAGTATAC
TATGCACATACAAATTTGCGTGTTAAAATGTGTTAGTTCATGTTCTTCAATCAACAAATGATAAAAATGGTGCCTGCTAG
AAAAGCAGTTTTTCTGCACCGGATTTGTTATTTTTTCACATGGCACAAAAATTCATGTGATTGCACCAAACGTAAATCTT
TGTTTGCAACACTTTGTGTGTTTTT-----TATTTTTTGTAAAAAACAAAAAAAATGGGAATTTTCTTTAGTCATGGCGT
GTGCCCCCGATTAGTTACCGATGACGATGCACGGAAACTTCCAACAAGACATGTCCACGTCTCGGTACGAAATGAAGGGA
GACTTTAGTGAGCTTTTGAACCCTTCAACC-----CCGGCCCTTTGACATTTGTTCCCTACCTCCATCCCAACTCTTCTC
CGG---GTTATATATACACCCATCCCCGATCATCGTGACCACAGTACCACAACACGTACGCACCAACAATCTCATCGGCT
CTTTAAAAAGAGAACG----TCTCATCGGCAATGGCGCGCTCCAGAGTCTCGATCATGCCATCGCCGGTTCTCGTGTTGA
CCGTGGCCGTCGCCGCGCTCGTGTCGGCGTGCACGGCGGACCCGGAGCCGGTGCAGGACTTCTGCGTGGCGGCGGTCACC
AACGGCTCGGCCGACCATCCGTCGTACCCGGGGTTCCCGTGCAAGCCGGCGTCGGCGGTGGTCTCCGACGACTTCTTCTT
CGCGGGGCTGGCGCGCTCGGGCGCCGCCGACGCGGCCGAGAGCCCGTTCGGGTCCAGCGTGACGTCGGGCAACGTGGCGG
CCTTCCCGGGGCTCAACACGCTCGGCGTCTCCATCAACCGCGTCGACCTCGCCCCCGGCGGCGTCAACCCGCTGCACAGC
CACCCGCGCGCCGCCGAGCTCGTGCACGTCGTCGCCGGCCAGATGCTCGTGGGCTTTGTCAGCACCGCCGGCACTTTCTA
CTCCAAGGTGGTGCGGGAGGGGGAGAGCTTCGTCATCCCGCGCGGCATGGTGCACTTCCAGTTCAACACCGGCAAGGAGG
CCGCCAGGGCCGTCACCGTGTTCAACAGCCAGCTCCCCGGAGTTGTCCTTGCCGCGCCGTCGCTCTTTGGGGCTGACCCG
GAGATCCCCGACGCCGTCCTCTCCAAGAGCTTCCAGGTCGACGGCGAGATCATCAAGCTCCTCAAGTCCAAGTTCCGGAC
TTAAAAAACGACGCACGAGTAATT------------------------TTGATTGGTTTATTGTTCATATATATATACTG
TACACCAGTAAATACGGACACCTAAAG-TGTTCACTGTTTCATGTAATTTTGATTGGATATTTAATGCGTCAATAAAATT
TAAGTTCAAATTCTGTTCTACTTAAAATCAAACTTTCACCTCTTGCTTCAAACGAAGGAAGAAGATGGAGGCCTTTTTTT
TAGCGGTTTGAAAGTATGAGGACTTTTTTTGCAGATATCAAGTGTACTGCATGCGTGAGACAAGTAAAACGGGACAGAGA
GAATATTTTATTGGTGAATTTCGGCCGGTCACACCGCGTACATACGATTCACTCTTTATTAGCCGTAGGATGCCTTCTTA
AATGCTTCTATAGTTAAAAAAAAACAATGGCGCATGTTCATCCGAGCAGCCCCCATGATTTCCCCCAGCCGTCAGCTAGC
TTGCCGGCCGCCGTCCTCGTCGCCTCCCATCGCCTGGACGTCCTCCTGGCCGCTCTCCAGCTCCCGCCAGTACACTAGTA
GAAAACAGAGCTTTGGTTGTGGCCAGGATAAGGGCATTAATCCCGGTTCACTCAAGAACTTGGACCAAAGGGCGCATCAG
TCCTGGTTCGTGAGGCCAGGGCGCCGGCCAGGCCTCGGAGGCCATTGGTCCCGGTTCGTCTGACACTTTTGGTCCCGGTT
CCAGACACGAACCGAGACCGATGGGCCTCGCTCCTGGCCCAGCACCTTTAGTCCCGGTTGGTGGCTGAAACCGGGACTAC
CAATCGGGGCTAAAGAGAAGCCTATATATACCCCCGCCCCTGCCCGCTCACTGCTCTGTTTGTGCTATGTTTCTTTGGCC
GGCCGTGGGAGAGGTGTGTGTTGCTCTAGCTCGCCTCGCTCCTATGCACATGAGGTGTTCGATGAAATGCCCGAGCCACA
CTTAAGCTTTCTCCTCTCCAAGCTCCTTGTCCAAACTCCATTTTTCTTAAGATTTGTCTAGGTTTGCCG
>chr5A_7
------TATGCTTGTGTTCCCGCCAACAAGAAAAAAAACC--CGGCATGCTTGTGTATGTGGTGAGCACTTCATGACAT-
GAGTGCGCGTGGTTCAGTTCACCTTCCAATCAATTGGAGAAGAAACAAGAAAC--CTCTTTGGCCGACCGGGT-CTCCTC
CGCTCTCCACCAACCAAAAATCTTCGTCACCCTG------GCTCGCACGTCAAGCCACTGTTGTTCGTCACTGATGGCGA
TGATGAACACGCGACCAGTCTCCAGTCGCCAAAGCACTAGGATTTGAAAGCGTCTTGCAAAAAAGAATCTAGATGA-TTG
GCGCCAAACACCAACCGCAGCTAACAAATTAGCCAGGGCGACCGTGGT---AAAAAAGGCGTCGATAACGCGTGCGTGGA
TTCCGTGCTCCCGGTTGGACTTTGCACCAATTAGTTTAGAAAA-AAATAAAATCCGAAGACATATACTTTAAAATTTCAA
AAAA---AATCTTGAAACAAGTATGTCAATTAC------------------------------AT---------------
---------------TTGCGTGTGAAAATGTGTTAGTTCATGTTCTTCAACAAGTGATA---AAAAATTGTGCCTACGAG
CAAAGCACTTTA-CTGCACCGAATTTGTTATTTTTTCACGAGGCACAAAAATTCATGTAATTGCACCAAACGTAAAGCTT
TGTTTGCAAAACTTTGTGTATTTTT-----TATTTTTGTAGAAAACACAAAAAAATGGGAATTTTCGTTGGTCATGGCGT
GTGTCCCCGATTAGTTACCGATGACGATGCACGGAAACTTCGAACAAGACATGTCCACGTCTCGGTGCGAAATGAAGGGA
GACTTTAGTGAGCTTTTGAATCCTTCAACC-----CC-----TTTGACATTTGTTCCCTCCCTTCATCCCAACTCTTCTC
TCCCGTGTTATATATACACCCATCCCCGATCATCCTCACCACAGTACCACAACACGTACGCGCCAACAACCTCATCGGCT
CTTTTTTTTAAAAAAAAAAATCTCGTCGGCAATGGCGCGCTCCAGAGTCTCGATCATGCCGTCGCCGGTGCTCCTGTTGA
TCGTGGCCGTCGCCGCGCTCGTCTCGGCGTGCGCGGCAGACCCGGAGCCGGTGCAGGACTTTTGCGTGGCGGCGGCCACC
AACGGCTCGGCCGACCATCCATCGTACCCGGGGTTCCCGTGCAAGCCGGCGTCGGCGGTGGTCTCCGACGACTTCTTCTT
CGCGGGGCTGGCGCGCTCGGGCGCCGCCGACGCGGCCGAGAGCCCGTTCGGGTCCAGCGTCACGTCCGGCAACGTGGCGG
CCTTCCCGGGGCTCAACACGCTCGGCGTCTCCATCAACCGCGTCGACCTCGCCCCCGGCGGCGTCAACCCGCTCCACAGC
CACCCGCGCGCCGCCGAGCTCGTGCACGTCGTCACCGGCCAGATGCTCGTCGGGTTCGTCAGCACCGCCGGCACCTTCTA
CTCCAAGGTGGTGCGGGAGGGCGAGAGCTTCGTCATCCCGCGCGGCATGGTGCACTTCCAGTTCAACACCGGCAAGGAGG
CCGCCAGGGCCGTCACTGTGTTCAACAGCCAGCTCCCCGGAGTTGTCCTTGCCGCGCCGTCGCTCTTCGGCGCCGACCCG
GAGATCCCCGACGCCGTCCTCTCCAAGAGCTTCCAGGTCGACGGCGAGATCATCAAGCTCCTCAAGTCCAAGTTCCGGAC
TTAAAAAACGACGCACGAGCTTCACGGTCGAAGCTGCCTGTTGTTAGCTTGATTGGTTTATTGTTACAC-ATATACACTG
TACACCAGTAAATACGGACACCTAAAGTTGTTCACTGTTTCATGTAATTTTGATTGGATATTAAATGCGCCAATAAAATT
TAAG----------------------------------------------------------------------------
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>chr5B_41
----------------------------------------AACGGTATGCTTGTGTATGTGGTGAGCATTGCATGACGAC
GTGTGCGCGTGGTTCGGTTCACCTTCCATTCCATCGGAGAACAAGTGAAAAATCTCTT-TTGGTCGACCGGGT-CTCCTC
CGCTCTCCACCAACCAAAAATCTTGGTCACCCTCACCCTAGCTCGCACGTCAAGCCACTGTTGTTCGTCACTGATGGCGA
TGATGAACACACGA-------CCAGTCGCCAAAGCACTAGGATTTGAAAGCGTCTTACAAAAAAGAATCTAGATGATTTG
TCGCCAAACACCAACCGCGGCTAACAAATTAGCTAGGGCGACCGTGGTAAAAAAAAAGGCGTTGATAACGCGTGCGTGGA
TTCCGTGCTCCCGGTTGGACTTTGCACCAGTTAGTTCAGAAAATATATTCAA----AGGACATGTATTTTAAAATTTCAA
AAATAATAATCTTGAAACAAGTATGCCAATTACATATGGTACTAGCATACGATGCACATACAGAT---------------
---------------TTGCGTGTGAAAATGTGTTAGTTCATGTTCTTCAATCAACAAATGATA----TGGTGCCTGCTAG
AAAAGCAGTTTTTCTGCACCAAATTTGTT-TTTTTTCACAGGGCACAAAACTTCATGTAATTGCACCAAACATAAAGGTT
TGTCTGTAACACCGTGTGTATTTTTCACTATTTTTGTAAAGAAAAAAGCAAAAGCTGGGAATTTTCTTTAGTCATGGCGT
GTGCCCCCGATTAGTTACCGATGATGATGCACGGAAACTTCCAACAAGACATGTCCACGTCTCGGTACGAAATGAAGGGA
GACTTTAGTGAGCTTTTGAACCCTTCAACCCCGGCCC-----TTTGACATTTGTTCCCTACCTCCATCCCAACTCTTCTC
CGG---GTTATATATACACCCATCCCCGATCATCGTGACCACAGTACCACAACACGTACGCACCAACAATCTCATCGGCT
CTTTGAAAAGAAAACG----TCTCGTTGGCAATGGCGCGCTCCAGAGTCTCGATCATGTCATCGCGGGTGCTCCTGTTGA
TCGTGGCCGTCGCCGCGCTCGTGTCCGCGTGCGTGGCGGACCCGGAGCCGGTGCAGGACTTCTGCGTGGCGGCGGCCACC
AACGGCTCGGCCGACCACCCGTCGTACCCGGGGTTCCCGTGCAAGCCAGCGTCGGCGGTGGTCTCCGACGACTTCTTCTT
CGCGGGGCTGGCGCGCTCGGGCGCCGCCGACGCGGCCGAGAGCCCGTTCGGGTCCAGCGTGACGTCGGGCAACGTGGCGG
CCTTCCCGGGGCTCAACACGCTCGGCGTCTCCATCAACCGCGTCGACCTCGCCCCCGGCGGCGTCAACCCGCTGCACAGC
CACCCGCGCGCCGCCGAGCTCGTGCACGTCGTCTCCGGCCAGATGCTCGTGGGCTTCGTCAGCACCGCCGGCACTTTCTA
CTCCAAGGTGGTGCGGGAGGGGGAGAGCTTCGTCATTCCGCGCGGCATGGTGCACTTCCAGTTCAACACCGGCAAGGAGT
CCGCCAGGGCCGTCACCGTGTTCAACAGCCAGCTCCCCGGAGTTGTCCTCGCCGCGCCGTCGCTCTTCGGCGCTGACCCG
GAGATCCCCGACGCCGTCCTCTCCAAGAGCTTCCAGGTCGACGGCGAGATCATCAAGCTCCTCAAGTCCAAGTTCCGGAC
TTAAAAAACGACGCACGCTTAATT------------------------TTGATTGGTTTATTGTTAT----TATACACTG
TACACCAGTAAATACAAACACCTAAAGTTGTTCACTGTTTCATGTAATTTTGATTGGATATTAAATGCGTCAATAAAATT
TAAGTTCAAATTCAGTTCAATTTAAAATCAAACTTTTACCTCTTGCT---------------------------------
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>SNPs
SSSSSS-----------------S--S--S--------SS----------------------------------------
-------------S-----------------------------------------------------------S------
---------------------------------SS-S-------------------------------------------
-------------------------------------------------------S-----S------------------
------------------------------------S-------------------------------------------
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-----------------------------------------------------------------SSSSSSSSSSSSSSS
SSSSSSSSSSSSSSS--------S--------------------------------------------------------
---------------------S------------------S-----------------S-----------------S---
-------------------S-----------------SSSS-----SS--------------------------------
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-------------------------------------SSSSS--------------------------------------
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----S------S------------S--------------------------------------------S---S------
S-------------------------------S------------------------------------------S----
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---------------------------------S----------------------S-----------------------
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-------------------------------------------------------------------S--S---------
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-----------------------------------------------------------------SSSSS-----S----
--------------------------------------------------------------S-----------------
-------------S----S-S---------------S----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_27
-------ATGCTTGTGTTCCCGCAAAA-----------------------------------------------------
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>reverse_2046
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---------------------------------------------ACTGCATGCGTGAGACAAGT---------------
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