>input_sequence_71550
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-ATGACACTCGAAGAAGAGCTCTCCAAGCTGGCTGCCGATGTAGCGGCCATCTTGCCGGCACCGGTGAGGAAGGCCGTGG
ATGCACTGGCGCGCAGCAGCCCCGCCCGGGCCGCCGCAGATGCCCTAGTCTACCTCTCCGTGGGCACGACCTGCACGATG
TTCGCCGCCGCCTTCCTCACCGCCTTCGCGGGCCTGGCCTGCGCCCGCGGCTGGGGCTGCACTCCGGCCTATGTCCTGTC
CGAGATAGTGGACTATCTATCCACACCTGTCCTGCTTCTCCTGCCGCCGGCGCTCGTGCTCTTCTTCCTCCGCGCCGCCG
GCTGCAGGACCAAGGT----ACGTGCTCGTCACTCACTCTGCTCCGTGGTTCTGCTTCCCGTGATGCTGATGAATTCACT
GTGTAATGTGATAGGTG---GCGGCGGATGCGGAGAGCCTCATCGTGAAGAATGACGAGGAGCTAACCCTTCTGTCGCCG
TCGCCGCTGGCCTTGGCAATTCTTTGGCTTTTCATTGGGTCGGCGTCCATGGGAACCATCTCTTTCATTCTTTTCAAGTG
TGGATCTACAGAGATCTCCGACCTTCTCGGCTACGCAGCTCTCTTGTGCACGTTCATGTGGGAAGCCCTCGTCTATGTCC
GCGCTGCAGTGGCGCTGTGGAGGATGAATCCCGGGCCAAGCAACATGGTGGCTGCAGAGTAG------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------
>chr4A_1_TraesCS4A01G438900
AGGCCTCCTGAGGTTCAAAGCTTAATCACAAAGCTATCGTTTTTGTTTCCATCATTAGTAGTACCTTGCACTTCCATTTT
TACACCTTATTAATTATAGCCTAGAATAGAAA------------------------------------------------
-----------------------------------------------------CTGTAGTTAACCACATACTGGCACCAC
AAATGATCCCCACACCACCAA----------CTCTCTCTCTCACTCATAAGCCTATCACCGTCGTCACGTACTAGTAAGA
GAAATCAATGCAAGAACCTCTAGGCTGATCCACACACTTTGTCCTATGTGGAAAATACGAGAAAATCTATACTGCACTAA
TTCCATAAG-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------CAAGAACAAAG---------------GCTACCACACACTTTGTGCCGTTGATTTGACGTATGA
GAACATCATATCACCATTCTAATTCTAGTTCTAATCTTATT-TCCCTCGTGTCACTTTAGTCA---TCTTCTTCAAATGG
GATTGATGGCTAGGCACGTTCCTACTTTCCACAAACCAGGTGCAACTATTACAGAAGTTAAGACTACT-AAAAAAATTAA
TTAGCACCGCACTGCACAAGTTTCTTGGTGTCCTGTATGTTTGCGTCTTAATTAC----GAACTTGCAATCCTGGCATTT
TTTTAACAAGGAGAAACTATGTCTTAGTGTAGCATTTCTACATCTGGTCAAAATATTGGCATCTTGTTCTACTAAAGATA
AATACACTCGTCATGGCCA-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------CCTTTCGGTGTCTCCACATGTT
CAAAGCTCAATC-AAAAAGCTATCCATATACTACAACTTTTTTTC---C-CATCATTAATTGTTCCTTGTGCTTCCATTT
TTACACCATAGTGCCTAGAACTAGAACTCAAGCTAATCACATAGTGGCATGACAAACAATCCTCTCTGTTCGT-------
-----------------------------------------------------------------------------TTT
GAAAAATATAAGAAAA-TCTACACTACATTGCATAAGCAAGAAAAGAAGCTAT----ATACTAGTATAAAAGTCCCC-AA
GGCCCTAGGTCATAATACAAGCTAGAACTAGAAGCCAAGCCACACCGAGTATCACCGACCGGACCAC----TTCACTGGC
GATGACACTCGAAGAAGAGCTCTCCAAGCTGGCTGCCGATGTAGCGGCCATCTTGCCGGCACCGGTGAGGAAGGCCGTGG
ATGCACTGGCGCGCAGCAGCCCCGCCCGGGCCGCCGCAGATGCCCTAGTCTACCTCTCCGTGGGCACGACCTGCACGATG
TTCGCCGCCGCCTTCCTCACCGCCTTCGCGGGCCTGGCCTGCGCCCGCGGCTGGGGCTGCACTCCGGCCTATGTCCTGTC
CGAGATAGTGGACTATCTATCCACACCTGTCCTGCTTCTCCTGCCGCCGGCGCTCGTGCTCTTCTTCCTCCGCGCCGCCG
GCTGCAGGACCAAGGT----ACGTGCTCGTCACTCACTCTGCTCCGTGGTTCTGCTTCCCGTGATGCTGATGAATTCACT
GTGTAATGTGATAGGTG---GCGGCGGATGCGGAGAGCCTCATCGTGAAGAATGACGAGGAGCTAACCCTTCTGTCGCCG
TCGCCGCTGGCCTTGGCAATTCTTTGGCTTTTCATTGGGTCGGCGTCCATGGGAACCATCTCTTTCATTCTTTTCAAGTG
TGGATCTACAGAGATCTCCGACCTTCTCGGCTACGCAGCTCTCTTGTGCACGTTCATGTGGGAAGCCCTCGTCTATGTCC
GCGCTGCAGTGGCGCTGTGGAGGATGAATCCCGGGCCAAGCAACATGGTGGCTGCAGAGTAGCCCTTGCGCGGGATCATC
GACTTACTAAGGTAACTGGCATTAAGCTAAGATAAT--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------TTTTTTGCACTTGAT
CTCTCTCTCGTCTCAACTTGAAACACTATACATCCTGATATAATTTCGTCGTTCACCGACCACTAATTCACTCCACACCC
AGTTGGTAGAAGATGATGCAAGTATTGTTCAAGTCAAGTAGTGGAACGTCTCAGTGT--------TGTTTGGTATCAACT
GAAAGTATATATAATTGTTGTCTTCAGTCATCACCAACCAGCAATGCTACTCTTGTAGTACTAAACTGCCACGCGATGGT
AGAGATTGATAGGACAGTAATAATTCTTCTTCTTGATCTTATAAATTTTGTACTTTATAGTTTCATTTTGTAGTAAACTG
CAAATGACATTGATGTTGACACAAGTTCGTCCTTTAATTGCTAGGTGCGCAGGATTTCAAGCCGGAAGCAGCAGCAAGGT
GATGG-----GCTACGTAGTGCAGGAGCGCTGCTA--------TTTCCTACTTCCTTTGATGCTTTTCTGAATAAAGAGA
TGGACATGCATGCCGTGTGATGTTGTGTAGTAATCTACTACGTAGTACAGTACTCCCTCCGTTCCGATTTACTCGTCGTG
GTTTTAGTTCAAATTTGAACTAAAACCACCAAAAGTAAATCGGAACGGAGGGAGTACTAGCTAGTAGTATGAAGCTTGCT
TCAGTTGATGCTAGTTCAGCGCTGCACTGATGCAGTGACTGCAGCGCTATGGTGGCTTTGGTTGGTAGTTACTCTGAACC
GGACCTCTATCTAACATAACGATTTGTGCCGCTTCTATTTACCAGTACGTGCCCATACATATGACTGTACGCACGATCTG
ATGCATAGCCTCCATTCTACGTATGCAATAATAGCATTTTTACCGCCTATAACTTTGTCTGATGCAATCGATGGTGGAGA
GGCCATTATAACCACATCTTAAACAAAATAAAGATCATGAGGAATGGCTTCGAGCGGCGAGACAGGCGATCC
>chr7A_2
-GGCCTCCTGAGGT-CAAAGCTTAATCACAAAGCTATCTTTTTTGTTTCCATCATTAATTGTACCTTGCACTTCCATTTT
TACACCTTATTATAGCCTGTAGCTTTTTTTTTGATGGGAAGGCCTTCATGGCTAGCTTTATTTATCAATGACCGCTACAT
ATTCCAGAAGAAAGTTTACATCGTCCAGAAGAAAGTTTACACCTTATTATAGCCTGTAGCTAACCACATAGTGTCACGAC
AAATGATCCCCATATCACCAACTCTCTCTCTCTCTCTCTCTCTCTCATAAGCCTG-CACCGTCGTCACGTACTAGAAAGA
GAAATCAATGCAAGAACCTCTAGGCTGATCCACACACTTTGTCCTATCTCAAAAATATGAGAAAGCCTATACTGTACTAA
TTCCATAAGGGCATTTCTAATTGATCCCATAGAAAATAGATGAGTAAATCTTAGTGGAGTATATTTACTACACTAAGTTT
TGACCGGAACTAGCCGATCCCCTATATATAATGGAGTAAACTTAAATTTGTCTCATACATTACGTTGAACACTTGCTATG
CACCTCGGCGGTGAGTGGCAACCATGGTGACTACACTGGCGACGAGCAGCAGCAGCAGAAGCACACAGTTGGGAGGAGCA
GCGACAGCAGGAGCACACATCGGCGGCGGCAAGCAGCAACAGTAGCAGCACATCCTTTTCTAAAAAACAGTAGCAGCACG
TAGTGGGGAGGAGCAGCGGCGAGCAGCACGCACCAGCGACGAGATGTAGTAGCAGCACATGGCGGTGAGGAGCAGCGACG
AGCAACATGCACCAGCGGTGAATGACAGCTGCACGCACGGGCGGCTAGCAGCAGCAACACGCACCAACGACGGCGAGCAA
CAACAGCACGCAACGTGGAGCAGCAATAGAAGCAGCACACACCAACAGCGGCAAGCTGCCGCAACAACATCACACATCGA
GGGCGGCGAGCAGCAGCAACATGCAGCAGCGACGTGCAACAACAGCAACATTTAGTGGCCGTACCAGTAGTAGTACCGGT
AGGGGTTGCCAGCGAGGTCACCGGCGAGGCCGTGGGAGCTTCAGGTGAGTAGCCGGACGGTCACGAGAAGGTCTTTCCAT
GAAGAAAAATTATAGTCGGCCGCCTCCAGACAGAGTAAATATATGAAGATTTTTAGGGACGGAGTAACATTTACTCCCTT
ACGACAGATAAGGGATTGGCTAGGTGCCGGTTAAAGGAGTAAAATCACATTTTTACTCTCTAACTGATTATAAGGGATCG
GTTAGAAATACCCTAAGCAAGAACAAAAGCTATATACTATATTGCTACCACACACTTTGTGGTGTTGATTTGAAGTATGA
GATCATCATATCACCATTCTAATTCTAGTTCTAATCTTTAGTTCCCTCATGGAGTGCGGCGTTTCTGCTCCCGGGCTCAA
ATGAGC--------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------CTGGGCAAAATAAATAATCA-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------TTAAAGATAGAAAAAAATTCAAAAAAATCCCGAAATTGTTTTGCA
AGCAAGATGCTCATGTGTGCGTGATGTTCATGCAAAAATTGGTGGAGTTTGGACATTCGAGGAGCGCACAATTAAAAAGA
CAAAATTTAGCTATGTGAGTAAGGTTATTGTTCACACACTGTTTGGACCGA-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------TTTTCTCTCTTTTGCCACGAGCTCCTCAAATGTCCAAAGTGA
TGAAATTTTGCATGGACATCACGCAGGCGAACATCTTCTATACAAAATTTTTTAGTTTTTTTTTACATCAAGTTCTCTCG
TTTTCCCCTCCACCTTGGTCGCCGTGCGCAACCTAAGATGACTTACACATCTAGACGAAGGGAG----------------
----------------------------TACTAAAGATAAATACACGCGTCACGGCCACCTTTGGGTATCTCCACAGGTT
CAAAGCTCAAGCAAAAAAGCTATCCATATACCACAACTTTCTTTTTTTC-CATCATTAATTATTCCTTGTACTTCCATTT
TTACACCTTAGTGCCTAGAACTGAAACTCAAGCTAATCATATGGTGGCACAACAAGCAATCCCCTCTGTCCGTTTTGCTC
ATAAGTCAATTAATCTTCGTGACATACTAGAAAGATAAATCGAGGAAAGAACCTCTCTAGGTCGATCCGTTCTCCTATTT
GAAAAATATAAGAAAAATCTATACAACATTGCACAAGCAAGAAAAGAAGCTATATACATACTAGTATAAAAGTCCCCCAA
GGCCCTAGGCCATAACACCAGCTAGAACTAG-----AAGCCACACCGAGTATCACCGACCTGCAGACCACTTTCACTGGC
GATGACACTCGAAGAAGAGCTCTCCAAGCTGGCTGCCGATGTAGCGGCCATCTCGCCGGCACCGGTGAGGAAGGCCGTGG
ATGCACTGGCGCGCAGCAGCCCCGCCCGCGCCGCCGCCGATGCCCTAGTCTACCTCTCCGTGGGCACGACCTGCGCGGTC
TTCGCGGCCGCCTTCTTCACCATCTTCGCGGACCTGGCCTGCGCCCGCGGCTGGGGCTGCACCCCGGCCTATGTCCTGTC
CGAGATAGCGGACTATCTATCCACACCTGTCCTGCTTCTCCTGCCGCCGGCGCTCGTGCTCTTCTTCCTCCGCGCCGCCG
GCTGCAGGACCAAGGT----ACGTGCTCGTCACTCACTCTGCTCCATGGTTCTGCTTCCCGTGATGCTGATGAATTGATT
GTGGAATGCGATA---G---GCGGCGGACGAGGAGAGCCTCATCGTGAAGAATGACGAGGGGGAAACCCTTCTGTCGCCG
TCGCCGCTGGCCTTGGCAATTCTGTGGCTTTTCATTGGGGCGGCGTCGATGGGAGCCATCTCCTTCCTTCTTTTCAAGTG
TGGATATACAGAGATCTCCGACCTTCTCGGCTACGCGGCTCTCTTGTGCACGTTCATGTGGGAAGCCCTCGTCTATGTCC
GCGCTGCAGTGGCGCTGTGGAGGATGAATCCCGGGCCAAGCAACATGGTG------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------
>chr4A_349
--------------------------------------------------------------------------------
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--ACATCATATCACCGTTCTAATTCTAGTTCTAACCTTTAGGTCCCTTGTGTCACTTTAGTGACCTTCTTCTTCAAATAG
GATCCATTGCTAGGCACGCCACGGTTTTCCATAAACTAGACTACTACAATTACAAAATCAAATATAGTAACAACATTTAA
TTAGCATTGCACTACAGGAGTTTTTGGGTGACTTGTATGGTTGTGTCCTAATCATGCATGAACTTTCAATCCTGGCATGC
TTTTAACAAGGGGGAACTACGTCTTAGTGTAGCATTTCTAAATCCACTCAACATGTTAACATCTTGTTCCACTAAAGATA
AATACACTCGTCATGGCCACGTTTGGGTGGCACCACAGGTTCAAAGCTTAATCTCAAAGCTATCCATTCACTGCAATTTT
ATTTTGTTTTCATCATTAATCTTACCTTGTACTTCCAACTGGAACTCAAGCTAATCACATAGTGGCACGACAAGTGATCC
CCACATCACCAATTAAGCATGTCACTTTTGCTTATAAGTCAATTATCATCGTCATGCACTAGAAAGATAAATTAAGCCAA
GAACCACAAGGCCGATCCACACAGTTTGTCCCATCTTAAAAATAGGAAAAAATTTAAGCAAGAATGGAAGGAATATACCA
CACTACTACCACACTCTTTGCCACGTTCATCTAAAGTATGAGAAAAAACTTAGATTCCGATGGATAGTATTAGTTTTGAA
GATTCAGAAAGTACTCACTAGAATAGTTCTATTATCGGAAGATTAGGAAAAACTTTTGTATTTTAAAATGTAATTAAATC
GTTCATGGTCACTATGAAACACTACGGGTACATATAATGACAAATTCTTTCCTTTGTTAATTAAGATGTGCCTATAATTA
ATACTCTATTCTCAATGGCCACATATACTGCGTCAAAATAATACATGCCATGAAAGTACCGTAGGGCCATGACGACATCA
TATCACCGTTCAAACTCTAGTTCTAATCTTTAGATCCCTTGTGTCACTTTAGTGACGTTCTTCTTCAAATGGGACAAAAT
AGATTGCTACTATTACAAAAGTTAATATACTAACAATATTTAATTAGCATTGCACCGCACAAGTTTCTGGGTGTCTTGCA
TGGTTGCATCTTAATCATGAACTTTTAATCCTGGCATGCTTTTAACAAGGGGAAACTGCGTCTTAGCCTAGCATTTCTAA
ATTCGGTCAACATGTTAACATCTTGTTCTACTAAAGATAAATACACTCGTCATGGCCATGTTTCGGTGTCTCCGCATGTT
TAAAGCTTAGTCACAA-AGCTATCCATTCAGTGTAACTTTATTTCGTTCTCATCATTAATTTTACCTTGTACTTCCA---
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------------------------------------------------------------------------
>chr7D_996
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----------------------------------------------------------------------------TGGC
GATGACTCTCGAAGAAGTGCTCTCCAAGCAGGCTGCCGACCTAGCCGCCATCTCGCCGGCGCCGGTGAGGAAGGCCGTGG
ATGCACTGGCGCGCAGCAGCCACGCCCGCGCTGCCGCCGATGCCCTGGTCTACCTCTCTGTGGGCACGACCTGCACGATG
TTCGCGGCCGCCTTCCTCACCATCTTCGCGGACCTGGCCTGCGCCCGCGGCTGGGGCTGCACCCCGGCCTATATCCTGTC
CGAGATAGCAGACTATCTATCCACACCTGTCCTGCTTCTCCTGCCGCCGGCGCTCGTGCTCTTCTTCCTCCGCGCCGCCG
GCTGCAGGACCAAGGTACGTACGTGCTCATCACTCACTCTGCTCCATGGTTCTGCTTCCCGTGATGCTGATGAATTCACT
GTGTAATGTGATA---GGCGGCGGCGGACGCGGAGAGCCTCATCGTGAAGAATGACGAGGAGCCAACCCTTCTGTCGCCG
TCGCCGCTGGCCTTGGCAATTCTTTGGCTTTTCATTGGGTCGGCATCGATGGGAACCATCTCTTTCCTTCTTTTTAAGTG
TGGACATACAGAGATCTCCGACCTTCTCGGCTACGCGGCTCTCTTGTGCACGTTCATGTGGGAAGCCCTCGTCTATGTCC
GCGCTGCAGTGGCGCTGTGGAGGATGAATCCCGGGCCAAGCAACATGGTGGCTGCAGAGTAGCCCTTGCGCCGGATCATC
GACTTACTAAGGTAAGTGGCATTAATTAAGCTAAGCCGAACATCAACATCACACTTTCTCAAAATTAAGTATTGTAGCGG
AACATCGAGTGCTTTTGTACCAACAAATTGGTAGAAGATGATGCGAGTATATGTTAAGTCAAGTACAGTAGTACTCCCTC
TGTCCCATAATATAAGAACGTTTTTGACACTATACTAATGTCAAAAACGTTTTTATATTATGGGACGGAGGGAGTAGAAT
TTATCAGTCGGTTGGTTCTCCGTGTTTGTTATCAACTGAATGTGTAATTGTTGTCATCAGTTATCACAAAGCTCCAATGC
TAATCGAGTGCTTTTGTACCAACAAATTGGTAGAAGAGGATGCAAGTATATGTTAAGTCAAATACAGTAGTCTAGAATTT
ATCCGTTGGTTGGTTCTCCACGTTTGCTATCAACTGAAAGTGTAATTCTTGTCATCAGTTATCAGAAAGGTCCAATGCTA
CTCTCTTGTAAACTGCCACGTGTTGGTTGAGATCATACAATAATAATTTTTTTTCTTGATCCTAATTTTTTGCACTTGAT
CTTTCTCTCGTCTCAACTTGAAACACTATTGATCCTGATATAATTTCGTCGTTCACCGACCACTAATTCACTCCACACCC
AGTTGGTAGAAGATGATGCAAGTAATGTTCAAGTCAAGTAGTGGAATGTATCAGTTGGTTCTGCATGTTTGGTATCAACT
GAAAGTATATATAATTGTTGTCATCAGTCATCACCAAGCACCAATGCTACTCTTGTAGTACTAAACTGCCACACGATGGT
AGAGATTGATAGGAC-------------------GATCTTATAATTTTTGTACTTTATAGTTTCATTTTGTGCTAAACTG
CAAATGACATTGATGTTGACACAAGTTCGTCCTTTAATCGCCAGGTGCGCAGGATTTCAAGCCGAAAGCTC---CAAGGT
GATGGAGAGTGCTACGCAGTGCAGGAGCGCTGCTGTTTGCCTGTTTCCTACATCCTTTGATGCTGTTCTGAATAAAGAGC
G--------ATGCCGTGTGA---TGTGTAGTGATCTACTAGTACAA----------------------------------
------------------------------------------------------TACTAGCTAGTAGTATGAAGCTTGCT
TCAGTTGATGCTAGTTCAGCGCTGCGCTGATGCAGTGACTGCAGTGCTATGGTAGCTTTGGTTGGTGGTTACTCTGAACC
GGACCTATATCTAACATAATGATTTGTGCCGCTGCAATTTACCAGTACGTGCCCATACATATGACTAGACGTACGATCTG
ATGCAGAGCGTCCATTCTATGTATGCAATAATAGCATTTTTACCGCCTATAACTTCGTC---------------------
------------------------------------------------------------------------
>SNPs
S-------------S-----------------------S------------------S-S--------------------
------------SSSSSS-SSSSSSS-SSSSS------------------------------------------------
-----------------------------------------------------------S----------S--S---S--
------------S-S---------------------------S-----------SS-------------------S----
-----------------------------------------------S-SS------S------SS--------S-----
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------S---------------------------------SS----------S------
--------------------------------------SSS--------------------S----------------S-
---S---S----------SSS-SSS------S----S--SSSSSSSS-S-SSSS--S-S--SSS--S---S--S-S----
------SS-----S--SS-----S-S----S-S------S---S---S----S-S----------S------------SS
-----------S-S-----S--------------------S----------------SS----------S----------
--------------------------------------------------------------------------------
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----------------------------------------S--------------------S--------S---------
-------S--------------SS---------------S--S------SS----S------S------S----------
--------------------------------------------------------------------------------
---------------------S--S--------S----------------------------------------------
---------S-----S--S------------SSSSS------------------------S-SSS---------------
-----------------------------------------------------S--------------------------
----------------------------S--------S------------------------------------------
-----S---------------SS--------S------------------------------S-----------------
--------S-----------------------------------------------------------------------
---------------------------------------------S----------------------------------
-------------SSS------------S----------------------------------S----------------
-----------------------------------------------S------------------S-------------
-----S------------------------------S-------------------------------------------
-----------------------------------------------------------------------S--------
---------------S---------SSS-SSSS-SS--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--S--------------------------SS-------------------------------------------------
------------------------S---------------------S--S-----SS-----------------------
----------------------S--------------S--S-------------------------------S-------
---------------SSSSSSSSSSSSSSSSSSS----------S--------------------------SS-------
--------------------------------------S--S----------------------S----SSSSS------
----------------S-----------------S----------------S------------S--------------S
SSSSSSSSS-----------SSS--------S--------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------------
-------------------------S------------------S--------S------------S-------------
------S------------S-------------S-S------------------------------SS---S--------
-----S---S---------S-----------------------------------S---SSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_1487
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---------------------------TCCACAAACCAGGTGCAACT---------------------------------
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------------------------------------------------------------------------
>reverse_3637
--------------------------------------------------------------------------------
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------------------------------------AGCTCTCTTGTGCACGTTCA------------------------
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------------------------------------------------------------------------
>forward_1546
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------CCGCACTGCACAAGTTTCTT------------------------------------------------------
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------------------------------------------------------------------------
>reverse_4705
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------GAAGCAGCAGCAAGGT
GATG----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
