>input_sequence_71531
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-----------------------------------------------CACAGCCCGGAATTTTGGAAAACAAA--TAAAC
AGCGAATCCATTGCCCTAGCCTACACGGTTACACGTACGGTGGATAGCAAGATCGAGGAGGCATGAAAAGAGTGGGAACC
AACACCGCTGCCGTGAAGGCGACCGC------CGGCGCCGGTGACCGAGGAGAGCAGCACAAGGCGACGTCCAAGACACA
GGCGCAGAAGGTGGCCCGGCAGCAGGCTCTGCTTGCGTTCCTCAAGGCGGGGTTCGAGGATTACAAGCTGTACAGGGACA
GGGAGGACGAGGAGGAGGTGGAGGAGTACCGTCGCGCGGGTAAGCTCCACACGTACGACCCGGACAAGGAGCCCAAGAAG
CGCTTGGCCAGGGTCGCCAAACTCCACCCGCCGCTCGAGCACATGGCCGAGAAGATCAAATTGTACACATATTACCTCGA
GGAAGACGAGGATGACTTCAGGATAGGACTTTATTCATTAATCGGGGATGAAGTCAGAGGTTGAAAGTAGTAGTACTAGT
ATACTCCATCTGTTT-ATCTTTGTTGGACGACAATGTCGCGACTCGCAATGATTATTCAATGTG---TTAGTATAAAAGT
AAATATGCAGATGATACTCTCTTGTTTCTAGAAAATAGTTTAGAGTCTGCAAAGAATTTAAAATGGTTACTTGCTTGCTT
TGAACAAATGTCTGAATTAAGGATCAACTTCCAT----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------------------------
>chr3D_1_TraesCS3D01G138200
TCCTGAGCCGTCTTTAATGTTGAGCGGCGTGCTCTACAGCGGCACGAATGCGGGCAGCTGACCTCGTGCAGGAACACGCG
CAGACAAGGGTGGAGGGGTTTTGGTGGGTCAGGGCGGTTAGAAGCGGGCGTAGGATCGGTCCGGACTTCCACAAAGCCCC
TCCTCTCCCCCACGTTTGTCTCCTGTTTGCGGGAGAAGTCGCGTCCGGACTGTCTCGCAGACCGATACAAGCCCGCATTA
GATGGTTTTCGTTGTCCGAATAGCACGGTCCGAACGCATGGGAGAGATTTACAAGTCGGCATTGGAAACGCCCATACTGC
CTTGCTCTGTTTTTTTAACACAGTACAAACGCAAGCGCTCATATATACGCGCATACACTTACCCCTATGAACGCACACAC
GCACACCCTACCCCTATGAGGCTGAGCGAACAGATCATCTAGAGATTTTACGAAGTCATCGTAGGCGCCTCGTAGTCGAC
GGGAACGTCTCCTCCCACTGAACGTGCGTCGCCGGAATTCCTGAAATAAATCCAGAATAAACGCGAGTACCAGGACTTGA
ATTCTGATGGACTCGAATACCACAGTCCATCTAACCATTCAACCACATGTTGGTTTGCACTACACTGCTGTGTTTGTACT
TTCGTTCGTGTGTGTATCGGATCCTGCCGTACGGCTTATTTATAAAAATCGGGCTCGCGCCTTTTCTCTTCTGGAAAAAA
GACATGCACTTGTCAATAACCCAGAGTCCAGATCCAACGCCCCGCGTGATCCGGCATCAGTATCGGTCGACCGGCGCCTG
T-------AGTTGTCCAAATCTGCTACACGAAGTAAACCAAATCTCTCGTTCCGATAGGATTACGACACTGTACGTAGTC
CAGGTCAATTTACAAGTAGGATTCCGACCCCGACTGCCAGAGGGGGCAGCCCGGCGGTGTCAAGTGCAAACCATCTATAA
ATGCAGCCGAATCATGGCCGTATGCCGCGATCAAATCCAACCTCCTACACAGCCCGGAATTTTGGAAAACAAA--TAAAC
AGCGAATCCATTGCCCTAGCCTACACGGTTACACGTACGGTGGATAGCAAGATCGAGGAGGCATGAAAAGAGTGGGAACC
AACACCGCTGCCGTGAAGGCGACCGC------CGGCGCCGGTGACCGAGGAGAGCAGCACAAGGCGACGTCCAAGACACA
GGCGCAGAAGGTGGCCCGGCAGCAGGCTCTGCTTGCGTTCCTCAAGGCGGGGTTCGAGGATTACAAGCTGTACAGGGACA
GGGAGGACGAGGAGGAGGTGGAGGAGTACCGTCGCGCGGGTAAGCTCCACACGTACGACCCGGACAAGGAGCCCAAGAAG
CGCTTGGCCAGGGTCGCCAAACTCCACCCGCCGCTCGAGCACATGGCCGAGAAGATCAAATTGTACACATATTACCTCGA
GGAAGACGAGGATGACTTCAGGATAGGACTTTATTCATTAATCGGGGATGAAGTCAGAGGTTGAAAGTAGTAGTACTAGT
ATACTCCATCTGTTT-ATCTTTGTTGGACGACAATGTCGCGACTCGCAATGATTATTCAATGTG---TTAGTATAAAAGT
AAATATGCAGATGATACTCTCTTGTTTCTAGAAAATAGTTTAGAGTCTGCAAAGAATTTAAAATGGTTACTTGCTTGCTT
TGAACAAATGTCTGAATTAAGGATCAACTTCCATAAGTGAATATTTGTAAAATAGCTCCATTGAGTCCAATGTTGGTTAT
GGAACCAATTCCTATAATTATGAAACCCATGTGAGATACAGAGGAATAAGCTATTCTTTTTTTGAAATTCCGTTGACCAA
GAGAAGTTGAAGCTGCATAGATTATTTGGATCGCTCCTATTGGTTCCCATTAATATTAATGAGGAGGGCATCCAATGTGT
GGCCCAAGCATTATCTTGTGGACTGGGATCTTTTTCTTTGAAATATCTGGGATTT-------------------------
----GGATTTGCAACCTGTGGTTGATAAAGTCTTGAAGAAAGCAGCTGGGTGGAG-GGAGAGACTACTAGGTTATGAGAA
GAAGCTGATTCTAGTTCAATCTTGCTTAGCTAGCATCCCTACCTACTTGATGAGTATGATCAAATTTCCTA--AATGGGC
TATTAATTTGATCAACTCTCAAATGGCCCACTGTTTTTGGGATAACTATGAGGGTCACC---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------ATAAGTACCATCTAGCTAGCTGGGGTTTATTGAATCAGAAAAA
ACAGTATGGTGGTATGGGGATTCCAAACCTTGCTGACATGAACCTATGCTTACTTGCTGCTTGGGTGGAC--AAGTATCA
AAGAGGTGAACAAAAAATTTGGAAGAAAATTGTGGATGCCAAGTATAGGACTAGTAATCCTAATATTCTTTCATGCCCTG
AGAGCTATGCCTACTCCCCCTTCTGGAAAGGAGTCCTTTGGGCTGCTAAAGCAGCAAAGATGGGCTACCAATGGAAAGTG
GGGAATGGTAGGAAAACTAAATTTTGGGAAGATCACTGGTTTGGGTCCTGTAGCTTATCCATTCAATTTTGGGAGTTGTA
TAGTATTGCCAATGAGCATAATAAAACTATTGGTGAGGTTTGGGATGGATCTAATCTTAAGATTTCTTTTAGAAGGTGTG
TAGACAATAGGCTACTTCATCTTTGGTTTGATTTGCTGAGTATTGCACAGTCGGTTATTCTGAATGATGAGGATGATGCT
ATTATT---------------------------------------------------------------
>chr3A_735
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------AATAACTCAGAGTCCAGATCCAACGCCCCGCGTGATCCGGCATCAGCATAGGTCGACCGGCGCCTG
TGCCCTGTAGTTGTCCAAATCTGCTGTACGAAGTAATCCAAATCTCTCATTCCGATAT-----CGACACTGTAGGTACTG
CAGGTCAATTTACAAGTACGATTCCGACCCCGACTGCCAGAGGGGGCAGCCCGGCGGTGTCAAGTGCAAACCATCTATAA
ATGCAGCCGAATCATGGCCGTATGCCGCCATCAAATCCAACCTCCTGGACAGCCCGGAATTTTGGAAACAACCACTAAAC
AGCGAATCCATTGCCCTAGCCTACACGGTTACACGTACGGTGGATAGCAAGAACGAGGCGGCATGAAAAGAGTGGGAACC
AACACCCGTGCCGTGAAGGCGACCGCCGTCGCCGGCGCCGGTGACCGAGGAGAGCAGCACAAGGCGACGTCCGAGACCCA
GGCGCAGAAGGTGGCCCGGCAGCAGGCTCTGCTTGCGTTCCTCGAGGCGGGGTTCGAGGATTACAAGCTGTACAGGGACA
GGGAGGACGAGGACGAGGTGGAGGAGTACCGTCGCGCGGGTAAGCTCCACACGTACGACCCGGACAAGGAGCCCAAGAAG
CGCTTGGCCAGGGTCGCCAAACTCCACCCGCCGCCCGAGCACATGGCCGAGAAGATCAAATTGTACACATATTACCTCGA
GGAAGACGAGGACGACTTCAGGATAGGACTTTATTCGTTAATCGGGGATGAAATCAGAGTTTGAAAGTAGTG---CTAGC
ATACTCCATCCGTTTTATCTTTGTTGGACGACAATGTCGCGACTCGCAATGATTATTCAATGTGTTATTAGTATAAAAAT
ACATAT--------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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---------------------------------------------------------------------
>chr6D_1583
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-AATATGCAGATGATACTCTCTTGTTTCTAGAAAATAGTTTAGAGTCTGCAAAGAATTTAAAATGGTTACTTGCTTGCTT
TGAACAAATGTCTGGATTAAGGATCAACTTCCATAAGTGTGATC------------------------------------
--------------------------------------------------------------------------------
----------------------------------------TGGTTCCCATCAATATTAATGAGGAGGGCATCCAATGTGT
GGCCCAAGCTTTATCTTGTTGGCTGGGATCTTTTCCTTTGAAATATCTGGGATTTCCCCTCCACCACTCCAAATTAAGGA
GAGAGGATTTGCAACCTGTGGTTGATAAAGTCTTGAAGAAAGCAGCTGGGTGGAG-GGGGAGACTACTAGGTTATGAGAA
GAAGCTGATTCTAGTTCAATCTTGCTTAGCTAGCATCCCTACCTACCTGATGAGTATGATCAAATTTCCTA--AATGGGC
TATTAATTTGATCAACTCTCAAATGGCTCACTGTTTTTGGGATAACTATGAGGGTCACC---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------ATAAGTACCATCTAGCTAGCTGGGGTTTATTGAATCAGAAAAA
ACAGTATGGTGGTATGGGGATTCCAAACCTTGCTCACATGAACCTTTGCTTACTTGCTGCTTGGGTGGAC--AAGTATCA
AAGAGGTGAACAAAAAATTTGGAAGAAAATTGTGGATGCCAAGTATAGGACTAGTAATCCTAATATTCTTTCATGCCCTG
AGAGCAATGCCTACTCCCCCTTCTGGAAAGGAGTCCTTTGGGCTGCTAAAGCAGCAAAGATGGGCTACCAATGGAAAGTG
GGGAATGGTAGGAAAACTAAATTTTGGGAAGACCACTGGTTTGGGTCCTGTAGCTTATCCATTCAATTTTGGGAGTTGTA
TAGTATTGCCAATGAGCATAATAAAACTATTGCTGAGGTGTGGGATGGATCTAATCTTAAGATTTCTTTTAGAAGGTGTG
TAGACAATAGGCTACTTCATCTTTGGTTTGATTTGCTGAGTATTGCACAGTCGGTTATTCTGGATGATGAGGATGATGCT
ATTATT---------------------------------------------------------------
>chr5D_1583
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-AATATGCAGATGATACTCTCTTGTTTCTAGAAAATAGTTTAGAGTCTGCAAAGAATTTAGAATGGTTACTTGCTTGCTT
TGAACAAATGTCTGGATTAAGGATCAACTTCCATAAGTGTGATC------------------------------------
--------------------------------------------------------------------------------
----------------------------------------TGGTTCCCATTAATATTAATGAGGAGGGCATCTAATGTGT
GGCCCAAGCTTTATCTTGTGGACTGGGATCTTTTCCTTTGAAATATCTGGGATTTCCCCTCTACCACTCCAAATTAAGGA
GAGAGGATTTGCAACATGTGGTTGATAAAGTCTTGAAGAAAGCAGCTGGGTGGAG-GGGAAGACTACTAGGTTATGAGAA
GAAGCTGATTCTAGTTCAATCTTGCTTAGCTAGCATCCCTACCTACCTGATGAGTATGATCAAATTTCCTC--AATGGGC
TATTAATTTGATCAACTCTCAAATGGCTCACTGTTTTTGGGATAATTATGAGGGTCACC---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------ATAGGTACCATCTAGCTAGCTGGGGTTTATTGAATCAGAAAAA
ACAGTAAGGTGGTATGGGGATTCCAAACCTTGCTGACATGAACCTTTGCTTACTTGCTACTTGGGTGGAC--AAGTATCA
AAGAGGTGAACAAAAAATTTGGAAGAAAATTGTGGATGCCAAGTATAGGACTAGTAATCCTAATATTCTTTCATGCCTTG
AGATCAATGCCTACTCCCCCTTCTGGAAAGGAGTCCTTTGGGCTGCTAAAGCAGCAAAGATGGGCTACCAATGGAAAGTG
GGGAATGGTAGGAAAACTAAATTTTGGGAAGATCACTGGTTTGGGTCCTGTAGCTTATCCATTCAATTTTAGGAGTTGTA
TAGTATTGCCAATGAGCATAATAAAATTATTGCTGAGGTGTGGGATGGAACTAATCTTAAGATTTCTTTTAGAAGGTGTG
TAGATAATAGGCTACTTCATCTTTGGTTCGATTTGCTGAGTATTGCACAGTCGGTTAGTCTGAATGATGAGGATGATGCT
ATTATT---------------------------------------------------------------
>chr5D_1583
--------------------------------------------------------------------------------
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-AATATGCAGATGATACTCTCTTGTTTCTAGAAAATAGTTTAGAG--------------AAAATGGTTACTTGCTTGCTT
TGAACAAATGTCTGGATTAAGGATCAACTTCCATAAGTGTGATC------------------------------------
--------------------------------------------------------------------------------
----------------------------------------TGGTTCCCATCAATATTAATGAGGAGGGCATCCAATGTGT
GGCCCAAGCTTTATCTTGTGGACTGGGATCTTTTCCTTCGAAATATCTGGGATTTCCCCTCCACCACTCCAAATTAAGGA
GAGAGGATTTGCAACCTGTGGTTGATAC--TCTTGAAGAAAGCAGCTGGGTGGAG-GGGGAGACTACTAGGTTATGAGAA
GAAGCTGATTCTAGTTCAATCTTGCTTAGCTAGCATCCCTACCTACCTGATGAGTATGATCAAATTTCCTA--AATGGGC
TATTAATTTGATCAACTCTCAAATGGCTCACTGTTTTTGGGATAACTATGAGGGTCACC---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------ATAAGTACCATCTAGCTAGCTGGGGTTTATTGAATCAGAAAAA
ACAGTATGGTGGTATGGGGATTCCAAACCTTGCTGACATGAACCTTTGCTTACTTGCTGCTTTGGTGGAC--AAGTATCA
AAGAGGTGAACAAAAAATTTGGAAGAAAATTATGGATGCCAAGTATAGGACTAGTAATCCTAATATTCTTTCATGCCCTG
AGAGCAATGCCTACTCCCCCTTCTGGAAAGGAGTCCTTTGGGCTGCTAAAGCAGCAAAGATGGGCTACCAATGGAAAGTG
GGGAATGGTAGGAAAACTAAATTTTGGGAAGATCACTGGTTTGGGTCCTGTAGCTTATCCATTCAATTTTGGGAGTTGTA
TAGTATTGCCAATGAGCATAATAAAACTATTGCTGAGGTGTGGGATGGATCTAATCTTAAGATTTCTTTTAGAAGGTGTG
TAGACAATAGGCTACTTCATCTTTGGTTTGATTTGCTGAGTATTGCACAGTCGGTTATTCTGAATGATGAGGATGATGCT
ATTATT---------------------------------------------------------------
>chr4D_1583
--------------------------------------------------------------------------------
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-AATATGCAGATGATACTCTCTTGTTTCGAGAAAATAGTTTAGAGTCTGCAAAGAATTTAAAATGGTTACTTGCTTGCTT
TGAACAAATGTCTGGGTTAAGGATCAACTTCCATAAGTGTGATC------------------------------------
--------------------------------------------------------------------------------
----------------------------------------TGGTTCCCATTAATATTAATGAGGAGGGCATCCAATGTGT
GGCCCAAGCTTTATCTTGTGGACTGGGATCTTTTCCTTTGAAATATCTGGGATTTCCCCTCCACCACTCCAAATTAAGGA
GAGAGAATTTGCAACCTGTGGTTGATAAAGTCTTGAAGAAAGCAGCTGGGTGGAG-GGGGAGACTACTAGGTTATGAGAA
GAAGCTGATTCTAGTTCAATCTTGCTTAGCTAGCATCCCTACCTACCTGATGAGTATGATCAAATTTCCTA--AATGGGC
TATTAATTTGATCAACTCTCAAATGGCCCACTATTTTTGGGATAACTATGAGGGTCACC---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------ATAAGTACCATCTAGCTAGCTGGGGTTTATTGAATCAGAAGAA
ACAGTATGGTGGTATGGGGATTCCAAACCTTGCTGACATGAACCTTTGCTTACTTGCTGCTTGGGTGGAC--AAGTATCA
AAGAGGTGAACAAAAAAATTGGAAGAAAATTGTGGATGCCATGTATAGGACTAGTAATCCTAATATTCTTTCATGCCCTG
AGAGCAATGCCTACTCCCCCTTCTGGAAAGGAGTCCTTTGGGCTGCTAAAGCAGCAAAGATGGGCTACCAATGGAAAGTG
GGGGATGGTAGGAAAACTAAATTTTGGGAAGATCACTGGTTTGGGTCCTGTAGCTTATCCATTCAATTTTGGGAGTTGTA
TAGTATTGCCAATGAGCATAATAAAACTATTGCTGAGGTGTGGGATGGATCTAATCTTAAGATTTCTTTTAGAAGATGTG
TAGACAATAGGCTACTTCATCTTTGGTTTGATTTGCTGAGTATTGCACAGTCGCTTATTCTGAATGATGAGGATGATGCT
ATTATT---------------------------------------------------------------
>chr4B_1585
--------------------------------------------------------------------------------
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---TATGAAGATGATACTCTTTTGTTTGTAGAAAATAATTTGGAGTCTGCAAAGAATTTAAAATGGTTACTTGCTTGCTT
TGAGAAAATGTCTGGTCTAAGGATCAACTTCCATAAGTGTGATC------------------------------------
--------------------------------------------------------------------------------
----------------------------------------TGGTTCCCATTAATGTTGATGAGGAGGGTATCCAATGTGT
TGCCCAAGCTTTTTCTTGTGGGCTGGGATCTTTTCCTTTGAAATATCTAGGATTCCCCCTCCACCACTCCAAATTAAGGA
GAGAGGATTTGCAACCTCTGGTTGATAAAGTCCTGAAAAAGGCAGCTGGGTGGAG-GGGGAGACTGCTAGGCTATGAGAA
GAAGCTGATTCTAGTTCAATCTTGCTTAGCTAGCATCCCTACCTATCTGATGAGTATGATTAAATTCCCTA--AATGGGC
TATTAATTTGATCAACTCTCAAATGGCCCACTGTTTTTGGGATAACTATGAGGGCCACC---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------ATAAGTACCACCTAGCTAGCTGGAGTCTATTGAATCA-AAAAA
ACAGTATGGTGGTATGGGGATCCCAAACATTGCTGACATGAACCTTTGCTTACTTGCTGCTTGGGTGGAC--AAGTATCA
AAGAGGTGAACAAAAAATATGGAAGAAAATTGTGGATGCCAAATATAGGACTAGTAATCCTAATACTCTTTCTTGCCCTG
AGAGCAGTGCCTACTCCCCCTTCTGGAAAGGAGTCCTTTGGGCTGCTAAAGCAGCAAAGATGGGCTACCAATGGAAAGTG
GGGAATGGTAGGAAAGCTAAATTTTGGGAAGATCACTGGTTTGGGTCCTGTAGCTTATCCATTCAATTTTGGGAGTTGTA
TAGTATTGCCAATGAGCACAATAAAACTATTGCTGAGGTTTGGGATGGAACAAATCTTAAGATTTCTTTCAGAAGATGTG
TAGACAATAGGCTACTGCATCTTTGGTTTGATTTGCCGAGTATTGCGCAGTCAGTTATTCTAAATGATGATGATGATGCT
ATTATT---------------------------------------------------------------
>chr1B_1585
--------------------------------------------------------------------------------
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---TATGCAGATGATACTCTTTTGTTTGTAGAAAATAATTTGGAGTCTGCAAAGAATTTAAAATGGTTACTTGCTTGCTT
TGAGCAAATGTCTGGTCTAAGGATCAACTTCCATAAGTGTGATC------------------------------------
--------------------------------------------------------------------------------
----------------------------------------TGGTTCCCATTAATGTTGATGAGGAGGGTATCCAATGTGT
TGCCCAAGCTTTTTCTTGTGGGCTGGGATCTTTTCCTTTGAAATATCTAGGATTCCCCCTCCACCACTCCAAATTAAGGA
GAGAGGATTTGCAACATGTGGTTGATAAAGTCCTGAAAAAGGCAGTTGGATGGAG-GGGGGG-TTGCTAGGCTATGAGAA
GAAGCTGATTCTAGTTCAATCTTGCTTAGCTAGCATCCCTACCTATCTGATGAGTATGATTAAATTCCCTA--AATGGGC
TATTAATTTGATCAACTCTCAAATGGCCCACTGTTTTTGGGATAACTATGAGGGTCACC---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------ATAAGTACCACCTAGCTAGCTGGGGTCTATTGAAT-A-AAAAA
ACAGTATGGTGGTATGGGGATCCCAAACATTGCTGACATTAACCTTTGCTTACTTGCTGCTTGGGTGGAC--AAGTATCA
AAGAGGTGAACAAAAAATATGGAAGAAAATTGTGGATGCCAAATATAGGACTAGTAATCGTAATATTATTTCTTGCCCTG
AGAGCAGTGCCTACTCCCCCTTCTGGAAAGGAGTCCTTTGGGCTACTAAAGCAGCAAAGATGGGCTACCAATGGAAAGTG
GGGAATGGTAGGAAAGCTAAATTTTGGGAAGATCACTGGTTTGGGTCCTGTAGCTTATCCATTCACTTTTGGGAGTTGTA
TAGTATTGCCAATGAGCACAATAAAACTATTGCTGAGGTTTGGGATGGAACAAATCTTAAGATTTATTTCAGAAGATGTG
TAGACAATAGGCTACTGCATCTTTGGTTTGATTTGCTGAATATTGTGCAGTCAGTTATTCTAAACGATGGTGATGATGCT
ATTATT---------------------------------------------------------------
>chr7D_1701
AATATT--------------------------------------------------------------------------
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--------------------------------------------------------------------------TGTAAA
ATAGCTCCATTGAGTCCAATGTTGGTTATGGAACCAATTCCTATAATTATGAAACCCATGTGAGATACAGAGGAATAAGC
TATTCTTTTTTTGAAATTTCGTTGACCAAGAGAAGTTGAAGCTGCATAGATTATTTGGATCGCTCCTATTATTACTAACC
AGGGCGAAAATAGATAATGAGCATGAGGTAACAATTCCATGTTGATCCGAATCAATCCATATGCTCCCATCTTTAATAAT
ATTCCCGCTAAAAGCATACATGTACTATAATGTGCTTCCCCATGGGTATCTGGTAACCACGTATGTAGGGGTATAATCGG
CAATTTGACAGCATAAGCAATAAGGAAGCCAAAATATAAAAGTATTTCCAAGGTTGCAGGGTATGATTGATTAA-TTAAT
CTTTCCA------------AATCTAATCCTGGTTCGTTGGAACCATATAAGCCCATACCCAGAACTCCGATTAAGAAAAA
AAGTGTAGCACCAATAAATCCATGGGA-----------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------TAATATTTGTA
AAATAGCTCCATTGAGTCCAAT---------------GTTGGTTATGGAACCAATTCCTATAATTATGAAACCC------
--------------------------------------------------------ATGTGAGATACAGAGGAATAAGCT
ATTCTTTTTTTGAAATTTCGTTGACCAAGAGAAGTTGAAGCTGCATAGATTATTTGGATCGCTCCTATT
>chr3A_1957
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----GGATTTACAACCTGTGGTTGACAAAGTCCTGAAAAAGGCAGCTGGGTGGAG-GGGGGGACTGCTAGGCTATGAGAA
GAAGCTTATTCTAGTACAATCTTGCTTAGCTAGCATCCCTACTTACCTGATGAGTATGATTAAATTCCCTA--AATGGGC
TATTAATTTGATCAACTCTCAAATGGCCCACTGTTTTTGGGATAACTATGAGGGTCACC---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------ATAAGTACCATCTGGTTAGCCGGGGTCTATTGAATAA-AAAAA
ACAGTATGGTGGTCTAGGGATCCCAAACATTGCTGACATGAACCTTTGCTTACTTGCTGCTTGGGTGGAC--AAGTATCA
AAGAGGTGAACAAAAAATATGGAAGAAATTTGTGGATGCCAAATATAGGACTAGTAATCCTAATATCCTTTCTTGCCCGG
ATAGCAGTGCCTACTCCCCCTTCTGGAAAGGAGTCCTTTGGGCTGCTAAAGCAGCAAAGATGGGCTACCAATGGAAAGTG
GGGAATGGTAGGAAAGCTAAATTCTGGGAAGATCACTGGTTTGGGTCATGTAGCTTATCCATTCAATTTTGGGAGTTGTA
TAGTATTGCCAATGAGCACAATAAAACTATTGCTGAGGTCTAGGATGGTACAAATCTTAAGATTTCTTTCAGAAGATGTG
TAGACAATAGGCTATTGCATCTTTGGTTTGATTTGCTGAGTATTGCGCAGTCAGTTATTCTAAATGATGATGATGAGGCT
ATTATT---------------------------------------------------------------
>chr6B_1957
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----GGATTTGCAACCTGTGGTTGATAAAGTCCTAAAAAAGGCAGCTGGGTGGAG-GGGGGG-CTGCTAGGCTATGAGAA
GAAGCTGATTGTAGTTCAATCTTGCTTAGCTAGCATCCCTGCCTATCTGATGAGCATGATTAAATTCCCTA--AATGGGC
TATTAATTTGATCAACTCACAAATGGCCCACTATTTTTGGGACAACTATGAGGGTCACC---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------ATAAATACCACCTAGCAAGCTGGGGTCTTTTGAATCA-AAAAA
ACAGTATGGTGGTTTGGGGATCCCAAATATTGCTGACATGAACCTTTGCTTGCTTGCTGCGTGGGTGGAC--AAGTATCA
AAGAGGTGAGCAAAAAATATGGAAGAAAATTGTGGATGCCAAATATAGGACTAGTAATCCTAATATTCTTTCTTGTCGAG
AGAGTAATGCCTATTCCCCCTTCTGGAAAGGAGTCCTCTGGGCTGCTAAAGCAGCAAAGATGGGCTACCAATGGAAAGTG
GGGAATGGTAGGAAAGCTAAATTTTGGGAAGATCATTGGTTTGGGTCCTGTAGCTTATCCATTCAATTTTGGGAGTTGTA
TAGTATTGCCAATGAGCACAATAAAACTATTGCCGAGGTTTGGGATGGAACAAACCTTAAGATTTCTTTCAGAAGATGTG
TAGACAATAGGCTATTGCATCTTTGGTTTGACTTGCTGAGTATTGTGCAGTCAGTCATTCTTAATGATGATGATGATGCC
ATTAT----------------------------------------------------------------
>chr2D_1958
--------------------------------------------------------------------------------
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-----GATTTGCAACCTGTGGTTGACAAAGTATTGAAAAAAGCAGCGGGATAGAGAGGGGGA-CTACTAGGCTATGAGAA
GAAGTTAATTTTAGTGCAGTCTTGTTTAGCTAGCATCCCTACCTACCTGATGAGTATGGTCAAATTCCCTA--AATGGGC
TATTAACTTGATCAACTCTCAGATGGCCCACTGTTTTTGGGATAACTATGAGGGTCACC---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------ATAAGTACCACCTAGCTAGCTGGGGTTTATTGACTCAGAAAAA
GCAGTATGGTGGTATGGGGATCCCCAACCTTGCTGATATGAACCTTTGTTTACTTGCTGCTTGGGTAGAC--AAATATCA
GAGAGGAGACCAAAAAATGTGGAAGAAAATTGTGGATGCTAAGTATAGGACTAATAGCCCTAATATTCTCTCATGTCCTG
AGAGCAATGCCTCCTCCCCCTTCTGGAAAGGAGTCCTTTGGGCTGCTAAAGCAGCAAAGATGGGCTACCAATGGAAAGTG
GGGAATGGGAGGAAGACTAAATTCTGGGAAGATCAGTGGTTTGGATCCTGTAGTTTATCTATTCAGTTTTGGGAGCTGTA
TAGTATTGCCAATGAGCATAACGAAACTATTGCTGATGTTTGGGATGGTACTAATCTTAAAATTTCTTTTAGAAGATGTG
TAGACAATAGGCTACTTCATCTTTGGTTTGACTTACTGAGCATTGCACAGTCTATTATTCTGAATGATGAGGAGGATGCT
ATTATT---------------------------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSS------S---------------------------------------S--S----------------
-------------------------SS---------S-----------S--------SSSSSS----------S---S-S
------------------S-------------------------------------------------------------
----------------------------S-----------------SS--------------------SS-SS-------
----------------------------------------------------S-----S---------------------
------SS----------------------------------------------------------------S----S--
-------------------------------------------S------------------------------------
-------------S------------------------------------------------------------------
----------------------------------S---------------------------------------------
------------S-----------------------S---------------S------S-----------SSSS----S
----------S-------------------------------------------------------------------S-
--------------------------------------------------------------------------------
--------------S------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------------------------------
---------S------------------------S---------------------------------------------
----------------------------------------------------------S---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------S----------------------------------
--------------------------------------------------------------------------------
-----S--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------S-----------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------
>forward_200
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------TCCTGTTTGCGGGAGAAGTC----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------
>reverse_1244
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------AAGGCGGGGTTCGAGGATTA-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------
>forward_506
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------GTCTCCTCCCACTGAACGTG------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------
>reverse_2526
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------ATGCTTACTTGCTGCTTGGG---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------
