>input_sequence_71519
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----------------------------------ATGGCGCCCCTGCTCCTGCTCTTCCTCCTCGGCGGCCTCTGCGCCC
TCTTCTCCCTCGCCTCCTCCTCCTCGCGCGGCGCCAAGAAGTGCTGCGACGTCGACGGCGAGAAGGCCAAGAGTC---AC
CAC---GGGGAGCAAGAAGCCAAGGCCAGCAAGGCGGTGGAGGAGAGGGAGGCGCGGCCGGCGCCGGCGGACCGGGAGGC
GGACCTGGGGATCGTGTTCTCCACGTTCGACCACGACGGCGACGGCTTCATCACGGCGGGCGAGCTGGAGGAGTCGCTGA
AGCGGCTGGGCATCGCCGTGTCCGCCGCCGAGGCCGCCGCCATGGTGGCCCGCGTCGACGCCAACAGCGACGGCCTCATC
GACATCCACGAGTTCCGCGAGCTCTACGACTCCATCCCCAAGAAGCGCAAGGCCTCGCTGCTCCCCGCCTCCGCCGGCGC
GGCCGACGGGGCC---------GAGGAGGAGGAGGACGAGGAGGGGGAGGAGATGGACCTCAAGGAGGCGTTCGACGTGT
TCGACGGCAACAAGGACGGGCTCATCTCCGCCGAGGAGCTGGGCACCGTGCTGGGCTCCCTCGGCCTGCGCGGCCGCCCC
GCCGCCGCCGAGTGCCGCGACATGATCCGCCTCGTCGACGCCGACGGCGACGGCATGGTCAACTTCGAGGAGTTCAAGCG
CATGATGGCCGTCGTCAAGGCTTAG-------------------------------------------------------
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>chr7D_1_TraesCS7D01G132700
TGGATGTGTTTTTGATGTTTATGACCAAACACCAATCGTATATACTCCATATCTTTGTATGAATTGAGCTAGGTTCATTT
TTTTCTCTCTCTCGGGAAGTTGAAACCTCGGTACTGGAGTTCAAGTTATATACTTTGCATGAGTGCTCCTACTCCAGTGG
ATTTGAATGGTGATTCTGTGGATCTCAAGATTTATTGACTCGGAGTCTCAGACTCTTGAAAATGTTCATAGGGGCATGAT
ACGTTGGGAATTGGAGCATGTCATTCATAAAAGTTGAGTGTACATGTGTATTTGTGAGCATGTACTCGTGTACTCCGTGT
TTTAAAACGGTTTTAATAGTGCCCCCTTGATTCACACGATTTGTAAGATGCAGGAACATGAAAAATAACATAGTGATATG
TCATGTTCGATATTACATGATTAGCATGCCTGTTTGATAGTGCACAGAAATAACATAGTGATATGTCATGTTCGATGTTA
CAGGAGTACTTAGTAGATCAAAAAGATTTCTATGAAAACTAGCAGTACAAACAAATCCCAAGATTATAATCATACGATTC
AAACAATCGTTACAAGGAAAAAATCATAGGATCAGATCCTCCAATTTTTTTTGTAAAAATCCTTTGAATCAAAGAGGCCC
TTGTTCTTTGGTGTGAGGGGTGGAAAATAATACAAGAAATGTGCGGGGATGCAGGTGTGAACTTGCCATGCCCCATGCAT
CGTCTG--------------------------------------------------------------------------
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---------------------------------------------------------------------AACCACCCACG
ATCTACTACTACCAGGTCGCACGATCGGGCAGCAGCAACTG-AACCAACCAACCAACCGCCGCCCTCTTCCACCCCACGA
CTCTTCTTCTTCCCCTTCTTTACTCACCCCGCCGTCGACTCTT-------CGTCGCCGTCGCCTCATATATTAGCCGCTG
CGTGCCGTCTGCCTTCACATTCACACACACTCGCCCGCGGACAAGCCAACTCTTGCGCTCCCA-CCTCCACAGCAGCTCA
GCA--GCAGCAGCGCAAAGAGCCAGCGTCCATCCATGGCGCCCCTGCTCCTGCTCTTCCTCCTCGGCGGCCTCTGCGCCC
TCTTCTCCCTCGCCTCCTCCTCCTCGCGCGGCGCCAAGAAGTGCTGCGACGTCGACGGCGAGAAGGCCAAGAGTC---AC
CAC---GGGGAGCAAGAAGCCAAGGCCAGCAAGGCGGTGGAGGAGAGGGAGGCGCGGCCGGCGCCGGCGGACCGGGAGGC
GGACCTGGGGATCGTGTTCTCCACGTTCGACCACGACGGCGACGGCTTCATCACGGCGGGCGAGCTGGAGGAGTCGCTGA
AGCGGCTGGGCATCGCCGTGTCCGCCGCCGAGGCCGCCGCCATGGTGGCCCGCGTCGACGCCAACAGCGACGGCCTCATC
GACATCCACGAGTTCCGCGAGCTCTACGACTCCATCCCCAAGAAGCGCAAGGCCTCGCTGCTCCCCGCCTCCGCCGGCGC
GGCCGACGGGGCC---------GAGGAGGAGGAGGACGAGGAGGGGGAGGAGATGGACCTCAAGGAGGCGTTCGACGTGT
TCGACGGCAACAAGGACGGGCTCATCTCCGCCGAGGAGCTGGGCACCGTGCTGGGCTCCCTCGGCCTGCGCGGCCGCCCC
GCCGCCGCCGAGTGCCGCGACATGATCCGCCTCGTCGACGCCGACGGCGACGGCATGGTCAACTTCGAGGAGTTCAAGCG
CATGATGGCCGTCGTCAAGGCTTAGCCCCACCTCCACCTCCACTCCATCCTCCTNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCT-----TCCCAGAGATCAGAATTTTTGTT
CTTGGATTCTGCGAGTCCGAGGGACGTTGTTGGTGATCTGCTCTGCTCTTGGACTGGATCCGAAGATCGGACGGCGAAGA
ACCCACTAATCAACCGGTTTATTACGGGAGAGGGGGCTGGCCGGAAGCTAAATCAGCTTCCCGCTCCGTCCGTGTGTTCT
CCCCTCCCCTGTTCTTGCTGATCAACTTGGT-----TTCTCTTCTCCTCTGCTATGTTACTGACAAAGTACTCTATCAAG
TATGCATGTAAATATTATTTCTTGGTCGGCTGGTGAAAATG-AAGAACTCACTCCATGC----TTAAGAATCGCTCTGTT
GCTGTGCTTGTGAATTGTTCAATGCTTGGTTAGA----------------------------------------------
---------TATGTGCCATTTTTTCGGGATCAAACAAACTTTCAGAGCTTTAGCCATGGACACTTGTCCATTAAGAAAGC
CAGCAAGAAAGTAC----CAACTGCCTTTGTGTACAAGTACAAGTACAAGGTAGGTATTTTGCCATCTTACGCTGTCAAA
AGAAAAATTTACATCTGGAGACTGAGTA-TGTCTATGGACTTTTGTACCGTGTGTTCTAGTAGTTTTT-GAAGAAATCAA
CGTGCACATACGCAGTTGAGTGGGTCTTTCGGCGTGCCATTTTTACCCGGTCAGAGTCGCAGGGAAAGAACAAATTCACC
AGCACCAACCTGACAAAAATCGAAGTAGAACAAAATATTGAGATGTAGGCCTGTGCTTTGT
>chr7A_640
CTTATTTTTT----------------------------------------------------------------------
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---------GGTGGGAGGCGTGGATAGTAATACGAGAAATGAACGGGGATGCAGGTGTCAACTTGCC------CATGCAT
CGTCAT--------------------------------------------------------------------------
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---------------------------------------------------------------------AACCACCCACG
GT---CTACTACCAGGTCGCACGATCGGGCAGCAACTGAACCAACCAACCAACCAACCGCTTGCCTCTTCCACCCCACGA
CTCTTCTCCTTCTCCATCTTTACTCACTCCGTCGTCGACTCTTTCGTCGCCGTCGCCTCCGCCTCATATATTACCCGCTG
CGTGCCGTCTGCCCTCACATTCACACACACTCGCCCGCGGACAAGCCAACTCTTGCGCTCCCCCCTCCCACAGCAGGCCA
GCACTGCGGCAGCGCCAAGAGCCAGCGTCCGTCCATGGCGCCTCTGCTCCTGCTCTTCCTCCTCGGCGGCCTCTGCGCCC
TCTTCTCCCTCGCCTCCTCCTCCTCGCGCGGCGCCAAGAAGTGCTGCGACGCCGACGGCGAGAAGGCCAAGAGCC---AC
AACCGCGGGGAGCAGGGAGAGAAGGCCAGCGGCAAGGTGGAGGAGAGGG---------CGGCGCCGGCGGACCGGGAGGC
GGACCTGGGGATCGTGTTCTCCACGTTCGACCACGACGGCGACGGCTTCATCACGGCGGGCGAGCTGGAGGAGTCGCTGA
AGCGGCTGGGCATCGCGGTCTCCGCCGCCGAGGCCGCCGCCATGGTGGCGCGCGTCGACGCCAACAGCGACGGCCTCATC
GACATCCACGAGTTCCGCGAGCTCTACGACTCCATCCCCAAGAAGCGCAAGGCCTCGCTCCTGCCCCCCTCCGCCGGCGC
CGAGGCCGGGGCT------GAGGAGGAGGAGGAGGACGAGGAGGGGGAGGAGATGGACCTCAAGGAGGCGTTCGACGTGT
TCGACGGCAACAAGGACGGCCTCATCTCCGCCGAGGAGCTGGGCACCGTGCTGGGCTCCCTCGGCCTGCGCGGCCGCCCC
GCCGCCGCCGAGTGCCGCGACATGATACGCCTCGTCGACAGCGACGGCGACGGCATGGTCAACTTCGAGGAGTTCAAGCG
CATGATGGCCGTCGTCAAGGCCTAGCCCCGCCCCCACCTCCACTCCACCCTCCTATTCTCC-------------------
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------------------------------------------------CCTCCCTTCCCCCAGAGATCAAAATTTTTGTT
CTTGGATTCTGCGAATCCGAGCGACGTTGTTGGTGATCTGCTCTGCTCTTGGACTGGATCCGAAGATCAGGCGACGAAGA
ACCCACTAATAAACCAGTTTATTACGGGAGAGGGGGCTGGCCGGAAGCTAAATCAGCTTCCCGCTCCGGCCGTGTGTTCT
CCCCTCCCCTGTTCTTGCTGATCAGCTTCGTTTCTCTTCTCCTCTCCTCTGCTGTGTTACTGAC-AAGTACTCTATCAAG
TATGCATGTAAATATTATTTCTTGGTCGGCTGGTGAAAATG-AAGATCTCAAATGCATAAGAATTAAGAATTGCTCTGTT
CCCGTGCTTGTTTAAT----------------------------------------------------------------
---------TATGTGCCATTTTTTTGGAGC----CAAACTTTCAGAGCTTTAGCCATGGACACTTGTCCATGAAGAAAGC
CAGAAAGAAAGTAC----CTGTCTTTGT---------------GGACAAGGTAGGTATTTTGCCATCTTACGCTGTCAAA
AGCAAATTTTACATCTGGAGACTGAGTTGTGTGTATAGACTTTTGTACCATTTGCTCTTGTC---TTT-GAACAAATCGA
TGTGCACATACGCAGTTGAGTGGGTCTTTAGGCGTGCCATTTTTACCCGGTCAGAGTCTTAGGGAAAGAAATAATTCACT
AGCGCTAACCTGAGAGAAATCAAAGAACAACAAAATCCTGAGATGTAGGCCTGTACTTTGT
>chr7B_645
TCTA---TTC----------------------------------------------------------------------
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---------GGTGCGAGGAGTGGATAATAATATGAGAAATGTTCGGGGATGCAGGTGTGAACTTGCCATGCCCCATGCAT
CGTCTGAACTAAACGCGGGCATGGGCAGCCCGGCCCGAAAAACCCGGGCCGGGCCGGGGCCGGGCTTGACACTCGGCCCG
GGCTCGGGCTTGACACTCGGCCCGGGCTCGGGCTTTGTTTTGCAGCGCGAGAAGTAGTTCGGGCCGGGCTCGGGCTTCTC
TTTTTCTATTTTTCGGGCCTTGCTTTCGGGCTTCGGGCCGGGCTTGCACGTACACGTACTAAAAAAACAGCGTTCGGGCG
GGGCTTTCGGGCTTCGGGCTTGATTTCGGGTCGGGCTCAGGCTTGATTTCAGGGAGTATTTCGGGCTTCGGACTGGGCTC
GGGCTTGAGAAATGAAGGTCGGGCTTTTACAAGCCCGGCCCGGCCCGACGTTTGCCCAGGTTTAGTCTGAACCACCCACG
ATCTACTACTACCAAGTCGCACGATCGGGCAGCAACTGAACCAACCAACCAACC----GCTGCCCTCTTCCACTCCACGA
CTCTTCTTCTTCCCCTTCTTTACTCACTCCGTCGTCGAC---------GCCGTCGCCTCCGCCTCATATATTAGCCGCTG
CGTGTCGTCTGCCTTCACATTCACACACACTCGCCCGCGGACAAACCAACACGCGCGCTCCCT-CTCCCACGGCAGGCCA
GCACTGCAGCAGCGCGAAGAGCCAGCGT-CGTCCATGGCGCCTCTGCTCCTGCTCTTCCTCCTCGGCGGCCTCTGCGCCC
TCTTCTCCCTCGCCTCCTCCTCCTCGCGCGGCGCCAAGAAGTGCTGCGACGTCGACGGCGAGAAGTCCAAGAGTAACAAC
CAC---GGCGAGCAAGAAGCCAAGGCCAGCAAGGCGG---AGGAGAGGGAGGAGCGGCCGGCGCCGGCGGACCGGGAGGC
AGACCTGGGGATCGTGTTCTCGACGTTCGACCACGACGGCGACGGCTTCATCACGGCGGGGGAGCTGGAGGAGTCGCTGA
AGCGGCTGGGCATCGCCGTGTCCGCCGCCGAGGCGGCCGCCATGGTGGCCCGCGTCGACGCCAACAGCGACGGCCTCATC
GACATCCACGAGTTCCGCGAGCTCTACGACTCCATCCCCAAGAAGCGCAAGGCCTCGCTGCTCCCCGCCTCCGCCGGCGC
GGCCGACGGGGCCGAGGGGGAGGAGGAGGACGACGACGAGGAGGGGGAGGAGATGGACCTCAAGGAGGCGTTCGACGTGT
TCGACGGCAACAAGGACGGGCTCATCTCCGCCGAGGAGCTGGGCACCGTGCTGGGCTCCCTCGGCCTGCGCGGCCGCCCC
GCCGCCGCCGAGTGCCGCGACATGATACGCCTCGTCGACAGCGACGGCGACGGCATGGTCAGCTTCGAGGAGTTCAAGCG
CATGATGGCCGTCGTCAAGGCCTAGCCCCACCCCCAC------TCCACCTTCTTCTTCTCT-------------------
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------------------------------------------------CCCT-----CCCCAGAGATCGAATTTTTTGTT
CTTGGATTCTGCGAGTCCGAGCGACGTTGTTGGTGATCTGCTCTC-----GGACTGGATCCGAAGATCAGACGACGAAGA
ACCCACTAATCAACCAGTTTATTACGGGAGAGGGGGCTGGCCGGAAGCTAAATCAGCTTCCCGCTCCGGCCGTGTGTTCT
CCCCTCCCCTGTTCTTGCTGATCAACTTGGTTTCTCA-----TCTCCTCTGCTGTGTTACTGAC-AAGCACTCTATCAAG
TATGCATGTAAATATTATTTCTTGGTCGGCTGGTGAAAAATTAAGATCTCACTCAATGC----ATAAGGATTGCTCTGCT
GCTGTGCTTGTGAAATGATCAGTGTTTCTTTGCACTTGTTAATTACTCACTAGTGTAAAAAACGCTCTTATATTATGGGA
CGAAGGAAGTATGTGCCAATTTTTTGGGAC----CAAACTTTCAGAGCTTTAGCCATGGACACTTGTCCATGAAGAAAGC
CAGAGAGAAAGTACCTATCTGCCTTTGT---------------GTACAAGGTAGGTATTTTGCCATCTTACGCTGTCAAA
AGGAAAAATTACATCTGGAGACTGAGTTGTGTAC--AGACTTTTGTACCATGCGTTCTTGTC---TTTTGAACAAATCAA
TGTGCACATACGTAGTTGAGTGGGTCTTTGGGCGTGCCATTTTTACCCGGTCAGAGTCGCAGGGAAAGAACAAATTCACC
AGCGCTAACCTGAGAAAAATCAAAGTAGAAGAAAATCTTGAGATGTAGGCC----------
>SNPs
-SS--S-S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSS----S----S-----S--------S--------S-------------------------------------
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----------------------------------S-SSSSS-------------------S-------------------
---------------------------S---S-------------------------SS---------------------
--------------------------------------------------------------S--SS---------SS--
---------------S--------------S-----------S-------------------------------------
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----------------------------------------------------S---------------------------
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--------------------------S------------SS---------------------------------------
---------------------S----------S--------------S------SSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------S-----------S----------
---------------------S----------------------------------------------S----S------
---------------S----------------------------------------------------S-----------
-----------------------------------------S-----------S----------S---------------
----------------------------------------------S-------S----------------S--------
--------------S--S---S--S--SS--SS-----------------------------------------------
------------------------S----SSSSS-------------------------------------S--------
---S---------------SS-SSSSS-SSSSSSSSSSSSSSS-------------------------------------
--S------------------------S----S---S------------S--------S--SSSS-------S-------
S----------------------------S--------------------------------------------------
---S-S-------S-------S--------------S-----------------S------
>forward_111
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-----------TCGGGAAGTTGAAACCTCGG-------------------------------------------------
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>reverse_2367
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----------------------------------------------CCCCCTTCCCAGAGATCAGA--------------
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