>input_sequence_71444
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------------------------ACAACAAAGCAAGA-----GCAGCTACCCTTGCAATCACTACCCAGTCTCCAAGAA
ACAAGTAGTAC-------TAGCTAGCACTGAGAAATGGCTTCGAACACGAGCTTGCTGGCCCAGATCATGGCGTGCACGC
TCCTACTCACCGGGCACACGTGCCACGGCGCACGCCACTTGGCTGACGCGACTCCGGCGGCTGCCCCTACCGCTGCTGTA
CCTGGCCTGCCAGCCGTGCCGACCCTGCCTGCCGTGCCCGCGGACACAGTCACCCTGCTGCCACCAATGCCGGCGGTCAC
CCTGCCCACCGTGCCGCAAGTGACGCTGCCGCCCATGCCTTCCGTCGTCGTGCCGAAGGCGGTGCTGCCGCCCATGCCCA
AGGTGACCATGGCGCCGATGCCCGCTATTGTCGTACCAAAGGTGACACTGCCGCCAATGCCGTTCGTCCCGAATGTGAAC
GTGCCCATGCCGTTCCTGGCGCCACCTCCGTCTGTGTAGGCGACTCAGTGCGGCGGCCTTGATGCAGAAGTAGCCACCAC
CCATATTTTCTTACATGCAAGCACTGTATTTTCTTTACACCTCCAT-ATTTTCTTACATGGAACTCTTTACTTTTTTTT-
-GAATTGTTTGGACTGCTTACCACATATGTCACGTGGTAGAACTCTTTACATTTTGTATGTGATGTGTATCAGCTGTTCA
TATACCATTTTATTTAA---------------------------------------------------------------
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>chr5A_1_TraesCS5A01G419900
TCATTGGGGAGATCCATACGAACAACAATCGGGCTACAATATTATTATTATTGAAACGGAGGATTTGCCTCATCTATTAA
TTAAGCAGAAGAGAGTTGCCTGGTTAATTAACGAAAAACCGGGCGAAAACCGTCACAAACCGCCGAGTGGCACACACAGA
TAGCCCACACCCGCCTTCACAGAGAGTGCCACATCGAGCTAGCACGCAAGCGTCATCGTCATCACTTCTCCCCAAGCAGG
CGTCATTGCCATCCCTAATCTATCAGAAAGCGACTCCAACTTTGCTGTGGACGAACACCGACCGACCCTCACCGCGAAGG
TTGTGTAGAAACACATGAAGACCTGTGCCAGAAATCAGCCACCCACGTCGAGGGCAGCGCAGCTCAATCGGGCTACGATA
TTCGACTGAACAGGAACCTGCCTGCACAATATACCTCTACAATACTTTGTAT----------------------------
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------------------------------------ATGTCCACATGTTTG----TATACAAGACTTGGTCAAACTTAAT
AAAGTTCGACTTAGGACAAATCTAAAACTTCAGTTATGACCTAACTACACAAATGCATGAATCACCCTG-TTAATTCTAG
CTAACTAGATGAGGCGATCAAATCCTAATGGATGTACCA------------------------CACTTTGGATCTTCAGG
TGAAATGGAAAACAGAGGGTGACGCAGAGAAGCACAACAGCAGGGGCATGATACAGAGACGACGGAGCTCTGCTGAAACC
TGAATACCGCCACTAAGCAGCAAATTAGCAA-CGCTCCGGTCACAGGCTGACGGGCAAAAATATGCGGCGCAGGCTGCAG
AGACGCTGAAAAGCTGATGCAGGAGGGTGGAAAGGAGGAGGACAGAGGAGCAGCACCACCGGCTCTACACCA--------
------------------------------------------TAACACGCTGGCATCTCGATTACCAACCTAACCGTAGC
TATGTTGGACACGATAATGTGAGTCTGGTCCAACAACCGATCTGATTCTGATCACTTCGCTAAGGCTATATATTGCCTTT
TACTGAGCCATGTTTTTGCATCCCACAACAAAGCAAGA-----GCAGCTACCCTTGCAATCACTACCCAGTCTCCAAGAA
ACAAGTAGTAC-------TAGCTAGCACTGAGAAATGGCTTCGAACACGAGCTTGCTGGCCCAGATCATGGCGTGCACGC
TCCTACTCACCGGGCACACGTGCCACGGCGCACGCCACTTGGCTGACGCGACTCCGGCGGCTGCCCCTACCGCTGCTGTA
CCTGGCCTGCCAGCCGTGCCGACCCTGCCTGCCGTGCCCGCGGACACAGTCACCCTGCTGCCACCAATGCCGGCGGTCAC
CCTGCCCACCGTGCCGCAAGTGACGCTGCCGCCCATGCCTTCCGTCGTCGTGCCGAAGGCGGTGCTGCCGCCCATGCCCA
AGGTGACCATGGCGCCGATGCCCGCTATTGTCGTACCAAAGGTGACACTGCCGCCAATGCCGTTCGTCCCGAATGTGAAC
GTGCCCATGCCGTTCCTGGCGCCACCTCCGTCTGTGTAGGCGACTCAGTGCGGCGGCCTTGATGCAGAAGTAGCCACCAC
CCATATTTTCTTACATGCAAGCACTGTATTTTCTTTACACCTCCAT-ATTTTCTTACATGGAACTCTTTACTTTTTTTT-
-GAATTGTTTGGACTGCTTACCACATATGTCACGTGGTAGAACTCTTTACATTTTGTATGTGATGTGTATCAGCTGTTCA
TATACCATTTTATTTAAGCCTCCATATTTTTATTGTTGGTGTTTCTTGAATTTTGACAGTTGTTCCATTGCACATACTCG
TGTTTA--TATGTGATCTTTGCCTTTTAAGGCCAAAACTGACAGATGTTTAGTTT-TTCGAAAGGAATGTCGAAAACTTT
CGACCTCTACCTACTCGAATGCATGTAACCATAAATTTAGTAAAATAGAAACAAGACAACATGGCAATATCATCTACTTG
CAAGCAGAGAACATGCAGAAGACAACAATGGCAGAATCACAACAAAGACGAGAT--AAAAGAAACACATACAACTAAGTC
GGCATTCTTGTGGCAAAGCCTTCAAGGAGATATGCCCTCGTGCCGATGTCAACAGGTCTAGCCTATGAAAGCCACGATGG
GAATTTTCGTTATAGATGAAGGGTTCAACTATTAGACTAGAACATCGAGAGAAGAGACAATACATACAACCATAAAATGA
TGGAAATAGCATTGTTGCCGTATCAAGCACAATGATAGATGCGCATACGATCCCACAATAAAAAGAAAGATGTAAAGAGT
TTCGGAGATCCAGTATTAAGCATAGTCAGGATATACACGAACCAGTATCAACATGTGGAGATATGTGGTACAAACAACAA
CCAGATACGATTAATTGCTTTTTTTTACGACTAGTTGACACCATCAAAATATTGTACATCTGCCGCCAACCAACATAGCG
GAAAAGTAGGATCGCACAGGCGGTCAGGGAGGCGACGAGGGTTCCCTTGCGCGCCGCCGGTGACGCCGCCGGTTCCCTCT
CTCTCCGTCGGCCGCTCCGGCGACGGGAGGGAGGGGGAACCTCGGGTCTGTTAGCTAGGTGTGTGTGTGATAGGGTTAAG
GTTGAGGGAGACGCTGCCGAGGCCGTTGCGGTGGTGTCACGTCGGAATAAGTTTCTCCGGGTTCCATTCGCGGCCAGGCG
AGGCTTTTGCCTTCGTCTAGGAGCCAGCGGAGTTGGGGATCCCCGGGTCTCGTCGAGGTCGC
>chr5B_447
TAACACGCTGGCACTTCGACTACCAATCGTAGCCAAAGAAACATGTGTTGGCCACTACTATGTGAGTCTGGCCAACAACC
GATCTAATGCCTTGGTTAAGGCTATAAATTGCCTCGTATTGACCCATGTTCTTGCATCCCAACTCGCAACAAAGCAAAAG
AGCAAGAGCAGCCTTGCAATCACTACCCAGGCACGACGCTAAACAGTCTCAAAGAAACTACTTACTAGCTAGCACCTGAG
CAATGGCTTCCAAAGCGAGCTTGTTGGCCATGATCATGGCGTGCACGCTCCTCGGCGGCCACACGTGCCACGGCGCACGC
CACTTGGCCGACGCCACCCCGACGGCTGTGCCCCACCCGCTGCGGCTGCTGTCCCTGGCCTCCCGGCCGTGCCTACCATG
CCAACCCTGCCACCGATGCTGGCTGTGCCAACGGTTCCGGCCGTGATAGTACCAGCAATGCCGACGGTGCCTGCGCTGAC
CGTGCCGCAGGTGA------CACTGCCTCCTATGCCTGCTGTTCCTTCCATGCCCAGGGTGGCAATGCCTCCGATGCTGG
CCATCGTCATGCCCAAGGTGACCATGGCGCCGATGCCCGCCGTCGTTGTGCCTAAGGTGACGGTGCCACCGATGCCCGCC
ATTCCTTCAATGCCCAAGGTGACACTGCCGCCGATGCCTTCTATCCCAACCGTCAACATGCCTATGCCGTTCCTGGCGCC
GCCTCCATCAGCACAGGTGTGCCATGTGCATGGTGTTGCATTGACAGTGTCGCGTTCTTCATGTTCAATCTAGCTCAAGA
TCACTCGCCTGCTCTTGTGTGAAATATTTGTGTTCGCCATTTATGTTTTGCATTTCAAGTATCAGATGTCAGGTAGTGGG
TTGATTTTCTTTTTATGGGCTGTCCCAATACATATACAGTATGTATTTATACTAGCAAACATGTCCGTGTGTTGCAACGG
AAGGAAAAAAAAGGCATCGCTCATGCACACACCTGACGACATCAGCAAATTCCTTTAAATCTTTCACGGTACTACATGAA
AAACAACATGGTAAATGGTGTTGCACAATAAAATAAGTATGACATGTTTTTTTAAGTGTACTCAAGGTGTTTTCAATTTA
TTTGACAAGCAAAATATCTATCTAGTTCCCTAAAAAAATATCTATCTAGTTGCCGCTACCTGTTTATGCCTTTTTTGACG
TACTCCTCGGCGATGCCCAACAAGTATTACATTAGGATGAAAATAGCAAAGTACATTTTTAAATTCACAAACATTTTCTA
TAAATTCTTGAACAAGTTTTAAATTGGCATTACAAATTCATGAACAATTTTTGAATTGGCGTTACAATTCATGAACAATT
TTTTAATCGACAAGCATATTTTGAGTCGGCAAATATTTTTTGAATTGATAAAAAAATTATGAACCGGCCCATTTCTTTTA
ATCGATGAACATTTGTGAAATGGTGAACTTTTTTTGAAAAGCATGAACATTTTTTGAATCAATGAACTTCTTTTGTAATT
CACGATCATTTTTTGGGTTTCTTGAAAATTTAGAAAATTCATGAATTTTTTGGAATTCATGGAGATTTGGTTCAATTCAC
AAACATTTTCTGGATATACAAATAGTTTTATCTGAATCGTGAACATTGCTTTTAATCGACAAACATTTTATGACTTCGGT
AATATTTTTTTTCATAAATTCACAAAAAAAACTGAAAGTTGAAAGTTTTTGGAAATTAAAAATTGTTTCAAATAAGAAAA
TATAAGAAGAGAAAAGAAAAATAAAATAACAAAAAAAACCGGAATAAAGAACAAAGGGCGTCCAGACTCGCTCATGGGCC
CAATAGGGCGCGCTGGCTCTTAGGTGTTCATGATTTATGATCTAAAAAAGAAAGGTGCTCACGATTTATAAAGGAGGAAA
GGGAGGAAAAGGGGAGCTAGGTGGGATCAAACCTGAGTTTCACTGGTGGTGAGAGAAGCTCTAGCCAGTGCACTACTTGC
CAACTTGTGATATCATGGATTGCTACTAATTGAATCAACGAAAAGCGCCTTCACAGGGAAAAATGACTCCTTTTTTCACT
TTGGATGTCATGGTGGGTAATTTATGCCAACTTTAGGGGTAATTTTGATGACGTACGGCCAGAAGCAATAGTTTCTTTAT
TATTAGATAAAGATTCTATCATTGTTATATTGGTGGAGGGAT-AAAAACTTCAAGATCCGTGGAAAGTGTATTTCACATC
AATAACCTGCAGCTAAAACATCTTCACAATCTTATAT-------------------------------------------
-------------------------------------------------------------------------CATCCAA
AGTCTATTAGCAAATATTGGTTCTCTCTTCTTATCACGTCTCACCTACCACATGATCTCTCTTCTCCGGATCCTTCTCCC
TCCCTGGTCCATTAGCGACAACTCTAGGGCTTGTTGGAGAGGAGGCCGCTAGCTTTTCCCCTTGACCCGTTGGCGCTGCT
GCGGGATCCTTGGCCTCCGCTAGCCGCTGTGATGCTGGGAGGGTGGGATAACCCCGGATCTAAATATCCTTGTCCGTGTT
CTGTAGGATTTTTGAGTTCTTCAACGCCGGTGAAGTTGGGGCAAAGATGTCTGGGTCGGGCTGGATGACATTTCCGGCGA
TGGATCGGGACCGGAGGTGAGGATTGGGAGCAAGGGTGGAGGGCTGGAGGCCGACGAGGGTCCGGGCGCGGGAATGGTTG
AAGGGTGGCAGGAGGAG---------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------GAGGAAGGATTTGGTAGATTTT
GTGCAATTTGGGGTGGGGTCGAGCTGTCGGGTCCGACATGGCGAGTGTGCCCGGGCACCCCCATATCCGCCCCATATTTG
GGCTGGATATGTGGGGTGCCGGTCAGCCCGGACGTTTGAGGGTTGTTTGAGAGGCCTGTCTGGGTCAAAAAATCGTGCCC
GGGCGTTTGAGATGGGTTTGAGAGGTCCGGGAGTAGATGCTC--------------------------------------
--------------------------------------------------------------------------------
------------------------------------TTACACCGTGACATGCCATTGGATCCCTGTC-----CATATTTT
ACACCTACAACTATCAATATCCAAAGTATTTTAGCACCTGTTCTAAAATAATAGTAGTTGCAGG-TTGTTCTAAGTCAAA
CATTTTTAAA-TTGACCAATCTTCGAAAAATATTGCAAAGATATACGATAAAAA--ATGTATAATATGAAAAAATATTTC
ATAATATCCTAATAATGG-AAAATATGGTATTGTAGATGTCGACATGTTTCTATATATATAAGACTTGGTCAAAAGTAAT
AAAGTTTGACTCAAGACAAATGTAAAACTTCCGTTATGATCTAACCATACAAATGCATGAATCACCCTG-TTAATTCTAG
CTAACTACTCCACAACAGCATGAGGCCAGCAATTTAGATCTTCAGTTGAAATAGATGGGACAGCAATTTGGATCTTCAGT
TGAAATAGA--ACAGAGGGTGACGCAGAGAAGCACAACAGCAGGGGCATGACACAGAGACGACGGAGCTCTGCTGAAACC
TGAATGCCGCCACTAAGTAGCAAATTAGCAAACGCACGGGCCACGAGCTGACGGGCAAAAAAATATGCGAGCGGGAT---
-------------------------GGTGGAAAGGAGCAGGACAGAAGAGCAGCACCACCGGCTCTACACCAAAAACACA
GAAAATTCGAACCATGCAGACGCATCCACTTTCCTTTTGGATTAACACGCTGGCGTCTGGATTACCAACCCAACCGTCGC
TATGTTGGACACGATAATGTGAGTCTGGTCCAACAACCGATCTGATTCTGATCACTTCGCTAAGGCTATATATTGCCTTT
TACCGAGCCATGTTTCTGCATCCCAGCACACAACAGAGCAAGCGCAGCCAGCCTTGCAATCACCACCCAGTCTCAAAGAA
ACTAGTACTCCGTACGAGTAGCTAGCACTGAGCAATGGCTTCGAACACGAGCTTGCTGGCCGTGATCATGGCGTGCACGC
TCCTACTCACCGGGCACACGTGCCACGGCGCACGCCACTTGGCCGACACGACTCCGGCGGCTGCCCCTGCCGCTGCTGTA
CCTAGCATGCCTGCCGTGCCGACCCTGCCTGCCGTGCCCACTGAAACGGTCACCCTGCTGCCACCAATGCCGGCGGTCAC
CCTGCCCACCGTGCCGCAAGTGACGCTGCCGCCCATGCCTTCCGTCGTCGTGCCTAAGGCAGTGCTGCCGCCCATGCCCA
AGGTGACCATGGCGCCGATGCCCGCTATTGTCGTACCAAAGGTGACACTGCCGCCAATGCCGTTCGTCCCGAATGTGAAC
ATGCCCATGCCGTTCCTGGCGCCACCTCCGTCTGTGTAGGCGACTCGGTGCGGCGGCCTTGATGCGGGAGTGGCCACAAC
CCATATTTTCTTACATGCAGGCACTACATTTTCTTTACGCCTCCATAATTTTCTTACATGGAACTATTTACTTTTTTTTT
TGAATTGTTTGGATTGCTTATCATATATGTCACGTGGTAGAACTCTTTACATTTTG-ATGTGATGTGTATCAGTTGTTCA
TATACCAATTTGTTTAAGCCCTCATATCTTTATTGTTGGTGTTTCTTGAATTTTGACGGTTGTTCCATTGCACATAATCG
TGTTTTTGTACGCAATCTTTGCCTTTTAAGGCCAAAAATGACAGATGTTTGTTTT-TTCACAAGGAATGTCAAAAACTTT
CGACCTCTACCTACTCGAATGCATATAACCATAAATTTATTAAAATAGATACAAGACAACATGGATATATCATCTGCTTG
CAAGCAGAGTACATGGAGAAGACAACAATGGCGGAATCACAACAAAGACGAGAT--AAAA-AAACACATACAACTAAGTC
GGCATTCTTCCGGCAAAGCCTTCAAGGAGATATGCCCTCGTGCCGATGTCAAGAAGTGTAACCTATGAAAGCCATGATGG
GAATTTTCATTATAGATGCAGGGTCCAACTATTAGACTAGAACATCAAGAGAAGAGACAATACATTCAACAACAAAATGA
TGGAAATAGCATCGTTGGCGTATCAAGCACAATGATAGATGCACATACGATCCCGTAATAAAAAGAAAGATGTAAAGAGT
TTCGAGGATGCAGTATTAAACATAGTCGGGATATACACGACCAGTAG-CAACATGTGGAGATATGCGCTAAAAACAACAA
GCAGATACAATTCAAATGCCTTCTTTACAATTAGTTCACACCATCAAAATATTGTACAT---------------------
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>chr5D_447
TACTAGCTAGCA--------------------------------------------------------------------
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---------------------------------------------------------------------------CTGAG
CAATGGCTTCCAAAGCGAGCTTGTTGGCCGTGATCATGGCGTGCACGCTCCTCGGCGGCCACACGTGCCACGGCGCACGC
CACTTGGCCGAAACCACCCCGGCGGC--TGCCCCACCCACTGCGGCTGCTGTCCCTGGCCTCCCGGCCGTGCCTACCATG
CCAACGCTGCCACCGATGCCGGCTGTGCCAACGGTTCCGGCTGTGACAGTGCCAGCTATGCCGATGGTGCCCACGGTGAC
CGTGCCACAGGTGACACTGCCACTGCCTCCTATGCCTGCTGTTCCTTTAGTGCCCAAGGTGACCATGCCTCCGATGCCCA
CCATCGTCGTGCCCAAGGTGACCATGGCGCCGATGCCCACCGTCGTTGTGCCTAAGGTGACGGTGCCACCGATGCCCGCC
ATTCCTTCCATGCCCAAGGTGACACTGCCGCCGATGCCTTCTATCCCAACCGTCAACGTGCCGATGCCGTTCCTGGCGCC
ACCTCCATCAGCATAGGTGTGCCATGTGCATGGCGTTGCATTGACGGTGTCGCGTTCTTCATGTTCGATCCAGTGCTAGA
CCACTCGACTGCTCTTGTGTGAAATATTTGTGTTCGCCATGTATGTTTTGCATTTCAAGTATCAGATGTCAGTTAGTGTG
GGTTGAT--TTTTTTTGGGTCGTCCCAATACATATGCAGTATTTCTATGTATTTAATGGTGTATTTCT------------
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------------ATTCTATCATTCTTATATTGGAGGAGGGTTCAAAAACTTCAAGATC-----------------ACATC
AATAACCTGCAATGAAAACATGTTCACATTCTTATACTCACTCCGGCCGGAAATACATGTCAGAGAAATGGATAAAAAAT
AAATGTATCTAGAACTAAAATATGACTAAAGATATCCATTTCTTCAACATGTATTTTCAGACGGGGGGAGTAACATCCAA
AGTGTATTAGCAAATATTG--TCTCTCTCCTTATCACGTCTCACCTAGCACATGAACTCTCTTCTCCAAATCCTTCTCCC
TCACTGGTCCATCGGCAACAACTCTAGGGTTTGTTAGAGAGGAGGTTGCTAGC-TTTCCCCTTGACCCGTTGGCGCCACT
GCGGGACCCTTGGCCTCCACTGGCCGCTGCGATGGC-GGAGGATGGGACAACCCCGGATCTAAATGTCCTTGTTCGTGTT
CCGTAGGATTTTTGAGTTCTTCATTGCCGATGAAGTTGGGGCAAAGACGTGATGGAATATTGGTTCCTTGGTTTCCCCAT
GTCAATATCCTTCCTTCGAGCCTCCTCGATGACTCTGAGGATGCTGTCGATCGTTGGGCATTCGGTCTGGCGTGATTACT
GTGTGTTCACCGTGGCGGCCGCGGCCCGCAGAGGGGATGGTGTTGCGGTGTTTTTGTTATTTAGTTGAGTGTATATAATT
TCATATCCATGGAATGAAGCTCAACTATATAGTAAAGATGTAAGTTGCAATCCGGATCATTGATCTATATCAGAAGTCAT
ATTTTTTTAAAAATGGGTGGGGGCACCGAAGATAACCCCATAAAGCCTAATTGGGATAGAGAAGCAACATGGTAGTTTGA
GTTAAATTTGAATCGCATAACATAGTGGACGAAGAGCTGATAAAGACAACTATAACATTGGACAAGGAGATAAGAGAGGT
ACATACCACCGCCATCTATTGCCTTCTTTATAGCAGCGAAAAAACTCCAAGGGATTAGGAAACTTCAAAATATGTGTGAT
GTATATTTTACGGACATATATGCAATGACATGCAATGGGCAAGTTTTACCATCTGAATGAGGATCAACGGGGAGATCCAT
GCGAACAACAATTGGGCTACAATATTCGACTGAACAGGAACCCTGCACAATATACCTCTACAGTACTTTGTTACAGTACC
TAATCTGTGCAATCCAATTTTGATCCAACCGCCATGTTACACCGTGACATGCCATTGGATCCCTGTCAGTGCCATATTTT
ACACCTATAACTATCAATATCCATAGTATTTTAGCATTCATTCTAAAATAATTGAAGATGTAGGATTGTTCTAAGTCAAA
CATTTTTAAGTTTGAGCAATCTTCAAAAAATATTGCGAAGATATACAATAACAAATATGTATAATATGAAAAAATATTTC
ATAATGTCCTAATAATGAAAAAAAATGGTATTGTAGATGTCGGCATGGTC---TATATATAAGACTTGGTCATACTTAAT
AATGTTCGACTTTGGACAAATCTAAAACTTCAGTTATGATCTAACCACACAAATACATGAATAATCCTTTTTAATTCTAG
CTAACTATATGAGGCGATCAAATCCTAATGGAT------------------------GGACCGCAATTTGGATCTTCAGT
TGAAATGGAAAACAGAGGGTGACGTAGAGAAGCACAACAGCAGGGGCATGATACAGAGACGACGGAGCCATGCTGAAAC-
TGAATATCGCCACTAAGCAGCAAATTAGCAAACGCACGGGCCACGAGCTGACGGGCAAAAAAATATGCGAGCAGGA----
-------------------------------------CAGGACAGAAGAGCAGCACCACCGGCTCTACACCAAAA-CACA
GAAAATTCGAGCCATGCAGACGCATCCACTTTCCTTTTGGCTTAACACGCTGGCATCTCGATTACCAACCCAACCGTAGC
TATGTTGGACACGATAATGTGAGTCTGGTCCAACAACCGATCTGATTCTGATCACTTCGCTAAGGCTATATATTGCCTTT
TACTGAGCCATGTTTTTGCATCCCACAACAAAGCAAGA-----GCAGCTAGCCTTGCAATCACTACCCAGTCTCAAAGAA
ACTT---GTAC-------TAGCTAGCACTGAGAAATGGCTTCGAACACGAGCTTGCTGGCCGTGATCATGGCGTGCACGC
TCCTACTCACCGGGCACACGTGCCAGGGCGCACGCCACTTGGCCGACACGACTCCGGCGGCTGCCCCTACCGCTGCTGTA
CCTAGCCTGCCGGCCGTGCCGACCCTGCCTGCCGTGCCCACGGACACGGTCACCCTGCTGCCACCAATGCCGGCGGTCAC
CCTGCCCACCGTGCCACAAGTGACGCTGCCGCCCATGCCTTCCGTCGTCGTGCCTAAGGCGGTGCTGCCGCCCATGCCCA
AGGTGACGATGGCGCCGATGCCCGCTATTGTCGTACCAAAGGTGACACTGCCGCCAATGCCGTTTGTCCCGAATGTGAAC
GTGCCCATGCCGTTCCTGGCGCCACCTCCGTCTGTGTAGGCGACTCAGTGCGGCGGCCTTGATGCGGGAGTGGCCACGAC
------------------------TACATGTTCTTTACGCCTCCAT-ATTTTCTTACATGTAACTCTTTACTTTTTTTTT
TGAATTGTTTGGATTGC-TACCACATATGTCACGTGGTAGAACTCTTTACATTT-GTATGTGATGTGTACCAGTTGTTCA
TATACCAATTTATTTAAGCCACCATATTTTTATTGTTGGTGTTTCTTGAATTTTGACGGTTGTTCCATTGCACATAATCG
TGTTTTTGTATGCGATCTTTGCCTTTTAAGGCCAAAAATGACAGATGTTTGTTTTGTTCAAAAGGAATGTCAAAAACTTT
TGACCTCTACCTACTCGAATGCATATAACCATAAATTTATTAAAATAGAAACAAGACAACATGGCTATATCATCTACTTG
CAAGCAGAGTACATGGAGAAGACAACAATGGCAGAATCACAACAAAGACGAGATAAAAAA-AAACACATACAATTAAGTC
GGCATTCTTCTAGCAAAGCCTTCAAGGAGATATGCCCTCGTGCCGATGTCAGGAGGTCTAGCCTATGAAAGCCATGATGG
GAATTTTCATTATAGATGCAGGATCCAACTATTAGGCTAGAACATTGAGAAAAGAGACAATATGTTGAACAACAAAATTA
TGGAAATAGCACCGTTACCGTATCAATCACAATGATAGATGCACATACGATCCCACAATAAAAAGAAATATGTAAAGAAT
TTCGCGGATGCGGTATTAAACATAGTCGGGATATACATGACAAGTAG-CAACATGCGGAGATATGCACTAAAAACAACAA
CCAGATACAATTCAATTGCCTTCTTTACAATTAGTTCACACCATCAAAATATTGTACATCTGC-----------------
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>SNPs
-S--S--SSS--S-SSSSSSS--S-SSSSSS-S-S-SS-S-SSSS-S--SSSS-SSSSS-S-SSSSS-SSSSSSSSSSSS
SSSSSS-SSSSSSS---SSSSSSS---S-SS-SSSSS-SS-SS-S-SSSS-S-SSSSSS-SS-SSSSSSSS-SS--S-SS
SSSSSS-SSSS-SSSSSS-SSSSS-SSSSSS--SSSS----SSSS-SSSSSSSS-SSS-SS-S---SSSSSS--SSSSS-
-SSSSSSSS-SSSSSSS-S--SSSS-SSS-S--SSSSSS-S-SSSS-SSSSSSSS-SS-S--SSSSS-SSSSSSSS-S-S
SSS-SSSSSS----SSSSSSSS-S-SSSSSSSSSS-SSS-SS-SS-SS-SSSSS-S-SS-SS-SSSSSSS-S----S--S
SSSSS-SSSS--SSS-SSSSSSSSSSSSSS-SSSS--SSSSSSSSS-S---S----------------------------
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-----------------------------------------S--------S--------S--------------------
---------------------------------------S-----S----------------------------------
-------S-------------------------S--SSS--------------------------S-------------S
--------------------------------------------------------------------------------
-----------------------------------S-S--S---SS---------------S--SS-SSSSS--SSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSS------------S--------S---------------------------------
----------------------------------------------------------------------S---------
--------------------------------------------------------------------------------
--------------------------------------------------S-----------------------S-----
--S----------------------------------------------------------SS-----------------
-------------------------------------------S---S--------------------------------
---S-------S---------------------------S-------S--------------------------------
------------------------------------------------------S-------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------S-S---S-----S--
-------------------S-----SS-----------S-----------------------------------------
-------------S-----------------------------------------------------------S------
-------S------------S------------------------------------S------------------S---
-----S------S------------------------S------------SS-------S-----------S--------
------------------------S--------------S-------------------------S--------------
---------S-----S--------------------------------------------S-------------------
---------S------------------------------------------S---------------------S-----
--------S---------S-----S----------------------------------------S----S-S-------
------------S-----------------------------S-------------------------------------
----SS---S---------S-------S------------S-SSSSSS-----------------S-S--S---------
--------S---S-S-SSSS--S-----S-S-----S--------------------------SSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_104
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----GCAGAAGAGAGTTGCCTGGT--------------------------------------------------------
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>reverse_4291
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--------------------------------------------------CCCTTGCAATCACTACCCAGT---------
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>forward_289
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-----------------------------GCGACTCCAACTTTGCTGTG-------------------------------
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>reverse_5453
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------------TGTTGCCGTATCAAGCACAA------------------------------------------------
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--------------------------------------------------------------
