>input_sequence_71391
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------------------------------------------------------------ATGCTTTCGTCAAGATTGCT
GCGTATTGCGAACAACCAGCCCGAGTCCTGGAGATGGATTTCCCTCCCAGGCTCAAGGTTTGCTCACATAAAATTTGCAC
CATGAAACTTTGTCCACGGCACTTATTCAAAACAAGATCAAAAAAATTGGGGCTTTATTAATGAAGTACTTACTCCGTCC
CGTAATGTAAGACGCTTTTTGACACTACACTAGTATCAAAAAACGTCTTACATTACGGGACGGAGGGAGTATATTATAAC
CTGAAATTGGGGCTTTATCATGATCAGATCTGCCGAATGTGCGGAGCTCCTAAGTGTGTACTTCCTCGCGGTCACTGGAG
AGGTCAAACCAAGGGACCTGTCTGCAGGGAAAAGCTACTCGGTTTACCTAGTGTACAAGCTGGCGACCAACACATCTGGT
ATAA------AAGGTTATGTGCAGTCGTCGTCGCTCAGGCTCTACGGGGAGCACATCGTCGCCACCAACAAGGTTAGTCT
CGACCCTGAAACGCACATGTCGGTCAATGATGTTATCTACCCTATCACGAGGGGCGATGGCTGGTTGGAGCTTAAGTTGG
CGGACTTCGCAAACGATGACGAGATGCTACAAGAGAAGGGGGTGATCGTGGATCTCCGTGATGAGGACGTCACCGTTGAG
AAGAGAGGACTCATCGTGGAGGGTATGGAGTTCAGGAGCAACTAG-----------------------------------
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>chr2B_1_TraesCS2B01G071800
AACACTATTACTATTAGTGGGTCTCTGTTAAAA-AATCATTACCATTCAGTAATGATTCTACAACTATTTCCAAGCATTT
ACTACAAGCAACGCCTTTTCCCATTTCAGCATTACTATGTGGCCAGAATATTTTACAATTTGAGGATGTAGGTGTGGAAG
GTGTCAGCCAGTAATGGTTTAATTCCAGTTACCGTATCTGCCACTATGTTTATTGTCATTCATCATAGGAATTCTGGGCC
-A--GTGTGTGCGTCCAGTAAAGCTCTTAATTCCTTTACCACATATGCCAACAACTTT-ACTGTCATTAGCAAATAG---
--GAACCACAGGACGGAAGTGCAATGCATGTATGGCCGCCCGTAATGGGATTTAATTCCGTTACGATATATGCTAAATCC
CATTACGATATATGCTAGCACTTTTACTACTATTGTCGATGAGTGGCTAGTCTGTACAGGGCGTGCGTGGACCATGCC-G
GATGGTAACCAATTTAAACC-ATTATTGTTTCTTCTAACAGTTTTACCTTCAATTAATTAGCGTGGTAGAGGTTTATTCC
CGC--------GGATCAACCCACCCACCTAATTAGGACCAGCGCATACGACTAGTTATTCTGCACGCTCACTTAGTTTAG
CTCCACCGTGTGTGTGTGTCTATATTAATATTGATATACCATTAATAAAATATAGAAATCCCTCTTTAAATCAATAGGTG
CAGGTAGTTGGTACTAGATTATTTTCAAGAAAAATATGTAGCCGCTGGTGACTGTCATGTCTATGGCCATCTGATCGGTG
ACCTCACAAGGGTCGACACAAAAATATTTAGAATAGCTACTCGCATCCATTGAGATATCTGACTGGCTTTAAAATTCATT
GGTTTCCCCTTTCCTGTCTTCATGCATGCATGGCTAATAAGATGAGATGTTAATATAAAACTGTTCTTAATTATGACTTG
AATTTTCGATGATCAACACAGATTGCTTGGTTTTAGAGAATAACTGACGGTGGGTGCAAGATGCTTTCGTCAAGATTGCT
GCGTATTGCGAACAACCAGCCCGAGTCCTGGAGATGGATTTCCCTCCCAGGCTCAAGGTTTGCTCACATAAAATTTGCAC
CATGAAACTTTGTCCACGGCACTTATTCAAAACAAGATCAAAAAAATTGGGGCTTTATTAATGAAGTACTTACTCCGTCC
CGTAATGTAAGACGCTTTTTGACACTACACTAGTATCAAAAAACGTCTTACATTACGGGACGGAGGGAGTATATTATAAC
CTGAAATTGGGGCTTTATCATGATCAGATCTGCCGAATGTGCGGAGCTCCTAAGTGTGTACTTCCTCGCGGTCACTGGAG
AGGTCAAACCAAGGGACCTGTCTGCAGGGAAAAGCTACTCGGTTTACCTAGTGTACAAGCTGGCGACCAACACATCTGGT
ATAA------AAGGTTATGTGCAGTCGTCGTCGCTCAGGCTCTACGGGGAGCACATCGTCGCCACCAACAAGGTTAGTCT
CGACCCTGAAACGCACATGTCGGTCAATGATGTTATCTACCCTATCACGAGGGGCGATGGCTGGTTGGAGCTTAAGTTGG
CGGACTTCGCAAACGATGACGAGATGCTACAAGAGAAGGGGGTGATCGTGGATCTCCGTGATGAGGACGTCACCGTTGAG
AAGAGAGGACTCATCGTGGAGGGTATGGAGTTCAGGAGCAACTAGC----TGCACGCACCAGATATGTCATTTGTGGCAA
TGCTATATATTCATGTATTGATGTGTAATAAGCCTAGACTCGCAAACATTCATTAAGTGGCTGAGTCCAGAAGTCAGC--
--GATCCGTTCATTTGCACGGACTGTATCAAAATATTATGGCATTTTTAAATACTATTTGGTTTTGCTAATTATCATTTG
C-TTTGCTGCATTGTTAATTTATATTTGGGATATGCGAGTTCACATTTGGTTTAAATTTCACGTCTCAGTCACATACTAT
TTGTTACTGATAAATTAAAAAATATTAAGAGCGAGAATTTCAAAAACCTTTAATGTAGATTTTTCGTCTTCTTCTTTCTT
CTAATCTATTTTTATTGTATACTAAAAGCATAATATGAAAGAAAAAAAGAAGATAGATATGCTAGAAAAATTCCAATCAA
TAATCTAAATGTCCGACCGTACATTTAGCGGCTCCTAGTATTGATCGTAAGTTACAATAAATGCATGACATTGACTTCTT
ATGTACTCCCTCTGTATAGTTAGTGATCTAAACGCTCTTATATTTCTTTACGGAGGGAGTAATATGTTGGTCCTCTTTGC
TACTTCCTTGGAATTGAGGTTTTCTACCTTTCCTGGCTTCTTTATATCCCAAGAGAAGTATATTCATGATCTTATTTTTC
CTGTTGCCCTTACTGATGAACCCATTGTTGAGACTCTAATGGAGCTCAATGTCCACCTCTGTTTCTGATGGTAGGCCTTT
GTCTGATCTGATGCACTACCGTCTTGGTGGAAGTCTTCTATATCTAGTTGTCACTCATTCAAGCATTTCCTATGTCATTC
GCATTCTTAGTTAATTTGTCTCCGCTCCCACTTTGATCCACTACAGTCATCTCCTATGTCCTATATGATATCTTCATTGG
GCGATCTCTCATCTTTTCTTCTTCCTGACATCCAATGTGTTCCAGCTTCAGGCCTATTTTGAATGTGAAACACTCCTCCC
GGGGGTACGGTCGC
>chr2B_1
AACAATATTACTATAAGTGGGTCTCCGTTAAAAAAATCATTACCATTCATTAATGATTTTACCACTATTTCCAAGCATTT
ACTACAAGCAACACCTTTTTTCATTTCAGCATTACTATGTGGCCAGAGTATTTTACCATTTGAGGATGTAGGTGCAGAAG
GTATCAGCCAGTAATGGTTTAATTCCAGTTACTATATCTACCACTATGTTTACTGTCATCCATCATAG---TTATGGGCG
AAGTGTGAGTGCGTCCAGTAAAGCTCTTAATTCCTTTACCACATATGCCAATAACTTTTACTATCATTAGCAAATATAAT
GCGAGCCAAAAGACCGAAGTGCAGTGCATCCATAGCCGTCCGTAATGGAATTTATTTCCGTTACGATATATGCCA-----
-----------------GCGCTTTTACC---ATTGTTGGTGAGTGGCTCGTCAGGCCGGGGCGTACGTGGGAACGTGTGG
TATGGTAACCAACTTAAACCCATTGCTACTTCTTCAACTGGTTTTATCCTCAATTAATTAGCGCAGTAGAGTA-------
-----------GGACCGACCCGCCCATCTAATTAGGACCAGCGCGTAGGATTAGTTGTTCTGCGCGCTCGCTTAGTTTAG
CGCCACCGTGTGTGTGTGTGTATATATATATATATATATA----------------------------------------
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>chr3B_1
AACACTATTACTATAAGAGGGTCTCTGTTAAAAAA-TCATTACCCTTCAATAATGATTCTACCACTATTTCCAAGCATTT
ACTACAAGCAACACCTTTTCTCATTTCACCATTACTATTTGACCAGAGTATTTTACCATTTCTGGATGTAGGTGTGGAAG
GTGTCAGCCAGTAATGGTTTAATTCCAGTTACTATATCTACCACTATGTTTACTGTAATCAATCATAG---TTATGGGCG
GAGTA--TGCGCGTCCAGTAAAGCTCTTAATTCCTTTACCACATTTGCCAACAACTTTTACTATCATTAGCAAATACAGT
ACGAGCCAAAAGACCGAAGTGCAATACATGCATGGCGGCCCGTAATGGAATTTAATTCCGTTACGATATATGCTA-----
-----------------GCGCTTTTACC---ATTGTTGGTGAGTGGCTCGCCTGGCCGGGGCGTACGTGGGA-CGTGTGA
GATGGTAACCAACTTAAACCCATTACTACTTCTTCAACCGATTTTACCCTCAATTAATTAGCACAGTAGAG---------
-GC--------GGACCGACCCGCCCGTCTAATCAGGACCAGCGCGTAGGATTAGTTGTTCTGCGCGCTCGCTTAGTTTAG
CGCCACCGT-----------------------------------------------------------------------
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>chr7B_72
------------------------------------------------------------------------AAGCATTT
ACTACAAGTAACACCTTTTCTCGTTTCGGCATTACTATGTGGCCAGAATATTTTACGATATGAGAATGTAGGTGTGGAAT
GTGTCAGCCAGTAATGGTTTAATTCTGGTTAGCATATCTACCACTATGTTTACTGTCATTCATCATAGGAGTTGTAGGCG
GA--GTGTGTGCGTCCAAGAAAGCTCTTAATTCCTTTACCACATACGCCAACAACTTTTACTGTCATTAGCAAACAG---
--GAACCACGGGACGAAAGTGCAGTGCATGCATGGCAGCCCA------------------TTACGATATATGCTA-----
-----------------GCACTTTTACC---ATTCTTGGTGAGTGGCTCGTCTGGCCAGGGTGTACGTGGATCGCA-TGG
GATGGTAACCAAATTAAACCCATTACTATTTCTTCTACCAG-TTTACCCTCAATCAATTAGCACAGTAGAG---------
-GTCTATTCCTGGAGCGACGTGCCCGCCTAATTAGGACCAGCGCGTACGATTAGCTATTATGCACGCTCGCTTAGTTTAG
C-------------------------------------------------------------------------------
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>chr7B_72
------------------------------------------------------------------------AAGCATTT
ACTACAAGTAACACCTTTCGTCGTTTCGGCATTACTATGTGGCCAGAATATTTTACGATATGAGAATGTAGGTGTGGAAT
GTGTCATCCAGTAATGGTTTAATTCTGGTTACCATATCTACCACTATGTTTACTGTCATTCATCATAGGAGTTGTAGGCG
GA--GTGTGTGCGTCCAAGAAAGCTCTTAATTCCTTTACCACATACGCCAACAACTTTTACTGTCATTAGCAAACAG---
--GAACCACGGGACGAAAGTGCAGTGCATGCATGGCAGCCCA------------------TTACGATATATGCTA-----
-----------------GCACTTTTACC---ATTCTTGGTGAGTGGCTCGTCTGGCCAGGGTGTACGTGGATCGCA-TGG
GATGGTAACCAAATTAAACCCATTACTATTTCTTCTACCAG-TTTACCCTGAATCAATTAGCACAGTAGAG---------
-GTCTATTCCTGGAGCGACGTGCCCGCCTAATTAGGACCAGCGCGTACGATTAGCTATTATGCACGCTCGCTTAGTTTAG
C-------------------------------------------------------------------------------
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>chr2B_1295
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----------------------------------GAATTTGCGGAGCTGATAAGTGTCTACTGCCTCGCGGTCACCGGAG
AGGTCCAGCCAAAGGACCTCTCCGCCGGCAGAAGCTACACGGTTTACCTCGTGTACAAGCTGGCGATCATCAACGCTGGA
CTGGATGCGGAAGGATCGGTGCAGACGTCGTCACTCAGGCTCTACGGCAACAGGGTCTACCCCATGGGCAAGGTTAGCCT
CCACCCCGAAGCGCCCAGAACGGCCGACCACGTCAACCACCCTGTCTCGAGGGGCGATGGCTGGTTGGAGCTTAGGCTGG
CAGACTTCGCAAACGATGGCGAGATGCTGACAGAACAGGGGGTCATCGTGGATCTCCGCGAGGAGAACCTCAGCGTCGAG
AAGCGCGGGATCATCGTGAAGGGCATGGAGTTCAGGAGCAACTAGTGGTGTGCGCACACCAGA-----CATTTGTGGCCA
TTT----TATTCATATTTTCATATGTAATAAGCCTAGCTCGGCAAACAAGCGTTAAGTGGCCGAGTCCACAATTAAGCCA
GCGATCCGTTCATTCGTATGGACTGTATCAAAATATTATGGCA-TTTTAACTAATATTTGGCTTTTCTAGTTATCATTCA
ATTTTGCTGCATTTTTAATTAATA--------------------------------------------------------
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>SNPs
--------------S----------------------------------S------------S-----------------
------------S-------S-----------------------------------S-----------------------
---------------------------------S-----S------------S-----------------S--S-----S
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------------------------------S-----------------S--------------------------SSSSS
SSSSSSSSSSSSSSSSS----------SSSS-----S-S---------S-----SS--------S------S-SSSSS--
------------S------------S-S---------S----------S--------------SS------SSSSSSSSS
S-------------S-S----S----------------------S-----S------------------S----------
-S-----------------S-----SS----SS-----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S---------SS-------S----S------------S----
-----S-S----S------S--S--S--S-S-------S----------S----------------S--S--SSS----S
S-SS----------S-SS------S-------S--------------SS-SSSSS--SS-S---SSSS---------S--
-S----S---S---S--SSS---S-S-SS-S--S-S-S-----S--S---------------------------S-S---
-S----------------S---------SSS---SS-------S--------------S--S---S--S---S---S---
---S-S--SS--------S----S---------------------S-------S-S-------SSSSS----------S-
-SSSSSS-------S-S--S--S--------------SSSS-------SS-S---------S-------S--S-S-----
--------------S-S-S------------------------S------S--S-------S---S---S--------SS
S------------S------S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSS
>forward_782
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------------------------------------------CGCTGGTGACTGTCATGTCT------------------
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>reverse_2583
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----------------------CGCTCCCACTTTGATCCACT--------------------------------------
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