>input_sequence_71362
--------------------------------------------------------------------------------
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--------------------ATGGCCAACTCCTTTCCGCCGGCCGATGGCCAGTCCGACCAGGTTCCCATGCATCTCCCG
TCCCTCTCTTAATCTTTTTT----CTGTTCTGGTCCACGCGCGGACGC--ACGGCTGCGAACCCACAAGCATGTTTTGAT
ATGA----------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------ACGTCCATTCTAACTTAATCTTGGCTGTGGCTGGGTTGCAGCATGA
GTGGACTCCGGTCGTTTTAGAGTGTAAACACATCGGGAAACCAGACGGTACTCCGCTCCAACTTCATCTTCACTGCAGGC
CAAATCGTCCAAGAACTAATGCTCATCAACAACACCGAACAAACACCACCACCACCACCACCACCG---ACCGGCCTTGG
GTGCCTCCCGAAGCCGAAGCGACCAAGGTGGTACGCCTGACCAAGATGCTCTCGCCGGACGATCGCCTA------GACGA
CGAGTTCGAAGACCTGGTGGAGGATGCCAGAGAAGAAGCGCGCAAATTCAGTAACCTTGTGAAGGTCGTGATCCCGCGGC
CCAGCTCCGGCAGTAATCCGGCGGTTGCTGGAGTCGGGAAGGCGTTTCTGGAGTACGCGTGCCTCGACAGCTCGTCCCAT
TGCAGGAGGAGTATGGATCGTAGGTGGTTTGCTCGGAGGCGAATTGCTGCTGGGTTCTACCC-------TGAGGACATGT
TTGCTGCTGGAGACTACGGCTGTGACGTAGACTGCCCCGAAGATGATGGATAA---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------
>chr5B_1_TraesCS5B01G067400
TGAAATACAGGAATATTTTTTGAAACTCCAGAACAAAATTAGAACACACAAACATTTTTAAAATTTGTGAAGAATTTTTG
AAACGGAACCAATTTTTAAAATCACAAACATTTCTTTAAAAATTTGTCAATAATATGGGACAAAAACATTCTGAACAATA
TTTTAATCTGGTTCATGAACAACTTTATATTATTTTGAAAATCTGGTTCACGGTTCTTATTTGTGCGCTTATTTTTTGCA
AATATGCAACTTCACAAATTAATGAAAAAATGAAAGAGGTGCGTGGAAAATAATTCGAACTCGCGGAAAATATATGATAC
TATTTTTGAAAAAAATATGAATAGATGAACATTTTTGTAGTATATGCTGAACATTTTCCGAATAAGTATTCAACAATTGT
GTGTTATACCAGTTTTTATTTTTGAAATTCTAGTTCACAAGTTTCTTTTTTTTCATTTGTCATTTCCTACTAAGATGGCC
ACTGGTTTTTTCGATCAAACAGCACCAGCAGGCTGGGCGCTAACTTTTTTGTTTTTTAACGAAAAAAATTATACGGGACA
GCCCAGCAGGGAGCAGGGTGTAGCGCCCTTGGTGAATTTTTGTTTCTTAACAGAAAAAAAATTAAAGCGGGCTGGCCCAG
CAGGGAGCTGGTGTGCACCCTCTGCGAAATGTTCCAATCCCGGCCATCCAAATGACCCGAAGGTTCGATTTAGACCGGGA
TTGCATGGTTCAGGGTGCAATCGACCGGGATTTCAA--------TTCGTTTGGCCGAACCCATCCAAATTCAGGGTTTAA
AATGGACTTTTTCCGATATCATTTCGTTATTA--AAAAGCAGCAAACG--CCCCTGAATTCGGACACCGACTCCTATCTG
AAACGTTATGCCCCACGGTCCAGCCGGCCTT---ATATGAACGGCCCGAGCGCCTCGTCTCCAAC---------------
------------------------AGAACGATTGATCCA------TCCGATCCCACAGACGGAATCCTCCGCCGCCGCCT
TGCCGGCCTTGCCGTATCGCATGGCCAACTCCTTTCCGCCGGCCGATGGCCAGTCCGACCAGGTTCCCATGCATCTCCCG
TCCCTCTCTTAATCTTTTTT----CTGTTCTGGTCCACGCGCGGACGC--ACGGCTGCGAACCCACAAGCATGTTTTGAT
ATGA----------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------ACGTCCATTCTAACTTAATCTTGGCTGTGGCTGGGTTGCAGCATGA
GTGGACTCCGGTCGTTTTAGAGTGTAAACACATCGGGAAACCAGACGGTACTCCGCTCCAACTTCATCTTCACTGCAGGC
CAAATCGTCCAAGAACTAATGCTCATCAACAACACCGAACAAACACCACCACCACCACCACCACCG---ACCGGCCTTGG
GTGCCTCCCGAAGCCGAAGCGACCAAGGTGGTACGCCTGACCAAGATGCTCTCGCCGGACGATCGCCTA------GACGA
CGAGTTCGAAGACCTGGTGGAGGATGCCAGAGAAGAAGCGCGCAAATTCAGTAACCTTGTGAAGGTCGTGATCCCGCGGC
CCAGCTCCGGCAGTAATCCGGCGGTTGCTGGAGTCGGGAAGGCGTTTCTGGAGTACGCGTGCCTCGACAGCTCGTCCCAT
TGCAGGAGGAGTATGGATCGTAGGTGGTTTGCTCGGAGGCGAATTGCTGCTGGGTTCTACCC-------TGAGGACATGT
TTGCTGCTGGAGACTACGGCTGTGACGTAGACTGCCCCGAAGATGATGGATAATGTATTTGGTAGTTAATTAATCTCTTA
TTTCTAGTGGTAGCGCTCCTTCGGCTTGGAGATGGACTGGCATAGGTGGTGGTCGTTATTTGGCGTCATGGTGGCGTCGA
TGGCGGAGGAACCTGCCAAGGTTGGTACCTCAATCTGTTCTGAAGATGGACAAGTAGAAGATGGTGATGACAACACATGT
GAGTGTGTCGGATCTTGTGAAGCAATTTATGTGTCTTTCAAAAAATTAATCTCTTATTTCTAGTGCAAGCATGGATCTTG
TGTAGCAATTTATGTGTCTTTCAAACATTATACTACAGTTTTATTAATACCTCATTATGGAAATTGTGTTTGACTAGTAC
AAATGCCCGTGCGTTGCACCGGGCAAAAAAG-GGAGCACAACCTGCTTCATGTGCCATTGTGGACCATCTTTACATCCAA
TTTTAATAAACACCGATGATAAGGTTAAACATGAAAACTTTCTTACTATTAATAAAAGTTAAATTTTTCATTAAAATTGG
AACACTTTTTT--GAATAGTTATG--TTTTATGAAATTCAAACATTTCTC-AAAAAATAACATTCTTTTGAACACATTTT
GTTTTTGTTGTACATTTCTAAATGGAAATGTTTTTAGTAAA-AATGGAATTTT----TTAGGGAATTTTGAATCTTTTTT
AAAAAGTGCAAACATATT-TTTTTCAAACAAAAATAGTGTGAACATATGTAAAACTGTGAACATTTTTAAACTATATATA
CTGTGTTAGG-TTT-TTTT--GCAGATAG----------------TTTTTTTAGAGCA--TTTTTAGG-GAATTTTACAA
ATAGCTGGTTGTTTGGTTGGGAAGAGTATTTTCTCTCTTTTTTTTCAAGTATTTTGGCTTGCCCAAAACAAAGCACTTCT
CAGCAGCCAGACACTCAGCCTCGTCACAATCATACGCACTCTGCTCCTCCATGACAAATCGATATTGCGCCGCCTCCGTC
CGCATCACCACCTTCTCCTCCTGCAGATTGGTGATCATGGCCATGGCC
>chr1B_1
TGAAATATAGGAATATTTTTTGAAACTCCAGAACAAAATTAGAACACACAAACATTTTTTAAATCTGTGAAGAATTTTTG
AAACGGAACCAAATTTTAAAATCACAAACATTTCTTTAAAAATTTGTCAATAATATGGGACAAAAACATTCTTAACAATA
TTTTAATCTGGTTCATGAACAACTTTATATTATTTTGAAAATCTGGTTCACGATTCTTATTTGTGCGCTTATTTTTTGCA
AATATGCAACTTCACAAATTAATGAAAAAATGAAAGAGGTGCGTGGAAAATTATTCGAACTCGCGGCAAATATATGATAT
TATTTTTGAAAAAAATATGAATAGATGAACCTTTTTGTAGTATATGCTGAACAATTTCCGAATAAGTATTCAACAATTGT
GCGTTATACCAGTTTTTATTTTTGAAATTCTAGTTCACAAGTTTCTTTTTTTCG-TTTGTCATTTCCTACTAAGATGGCC
ACTGGTTTTTCCGATCAAACAGCACCAGCAGGCTGGGCGCGAACTTTTTTG-TTTTTAACGAAAAAAATTATACGGGACA
GCCTAGCAGGGAGCAGGGTGTAGCGCCCTTGGTGAAATTTTGTTTCTTAACGAAAAAAAAATTAAAGCGGGCCGGCCCAG
GAGGGAGCTGGTGTGCACCCTCTGTGAAATGTTCCAATCCTGGCCATCCAAATGACCCGAAGGTTCGATTTAGACCGGGA
TTGCATAGTTCAGGGTGCAACCGACCGGGATTTCGACTTGAGGGTTCGTTTCGCCGAACCCACACGAATTCAGGGTTTAA
AATGGACTTTTTCCG-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------
>chr2A_219
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------ATTTGTGCGCTTATTTTTTGCA
AATATGCAACTTCACAAATTAATGAAAAAATGAAAGAGGTGCGTGGAAAATAATTCGAACTCGCGGAAAATATATGATAT
TATTTTTGAAAAAAATATGAATAGATGAACATTTTTGTAGTATATGCTGAACATTTTCCGAATAAGTATTCAACAATTGT
GTGTTATACCAGTTTTTATTTTTGAAATTCTAGTTCACAAGTTTTTTTTTT--CATTTGTCATTTCCTACTAAGATGGCC
ACTGGTTTTTTCGATCAAACAGCACTAGCAGGCTGGGCGCTAACTTTTTTG-TTTTTTAATGAAAAAATTATATGGGACA
GCCCAGCAGGGAGCAGGGTGTAGCGCCCTTGGTGAATTTTTGTTTCTTAACGGAAAAAAA--TAAAGCGGGCTGGCCCAG
CAGGGAGCTGGTGTGCACCCTCTGCGAAATGTTCCAATCCCGGCCATCCAAATGACCCGAAGGTTCGATTTAGACCGGGA
TTGCATGGTTCAGGGTGCAATCGACCGGGATTTCAACTTGAGGGTTCGTTTCGCCGAACCCATCCGAATTCAGGGTTTAA
AATGGACTTTTTCC------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------CTTATCA----------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------------------------
>chr5D_810
--------------------------------------------------------------------------------
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-----------------ATCATTTCCGTAATTAGAAAAGCAGC-AAACGCCCACGGAATTCGGACACGGATTCCTACCTG
AAACGTTATGCCCCACGGCCCGGCCGGCCTTTATATAGGAACGGCCCGACCGGCT-------------------------
--------------------ACATAGAACGATCGCTCCA------TCCGATCCCACAGAGGGAATCTTCCGCCGCCGTGT
--------TTGCCGTATCGCATGGCCAACTCCTTTCCGCCGGCCGATGCCCACTCCGACCAGGTTATCATGCATCTCTCG
TCCCTCTCTTAACCTTTTTTTTTTC-GTTCTGGTCCACGCGCGGACGC--ACGGCTGCGAACCCACATGCATGTTTTGAT
ATGTTGTTCACCTTAATGTTGG-----TTTTTTTCCTCCTTAGGACTTCCCACTTGATCAATTGAGCGAATGATCTATTT
TGGGCCCGATTAGTTCTGTTTTTACTAAACGGTTCGTATTTGCTTGCGGCAAGCTGGGTGACGGAATTGCGTAATTTGCT
CTTTGACGACGTTTCAT-------CACTAGTAATACATCCATTCTAACTTAATTTTGGCTGGA------TTGCAGCATGA
GTGGACTCCGGTTGTTTTAGAGTGTAAACACATCAGGAAACCAGACGGTACTCCGCTCCGACTCCATCTTCACTGCATGC
CAAATCGTCCAAGAACTAATGCTTATCAACAACACCCCACAAACACCATCACCACCGCCACCACCACCAACCGGCCTCCG
GTGCCTCCCGAAGCCGGAGCGACCAAGGTGGTACGCCTGACCAAGATGCTCTCGCCGGACAATCGCCTCGAGGACGACGA
CGAGTTCGAAGACCTGGTGGAGGATGTCATAGAAGAAGCGCGCACATTCGGTAACCTTGTGAAGGTCGTGATCCCACGGC
CCAGCCCCGGCAGTAATCCGGCGGTTGCTGGAGTCGGGAAGGCATTTCTGGAGTACGCGTGCCTCGACAGCTCCTCCCAT
TGCAGGAGGAGTATGGATCGCAGGTGGTTTGCTGGGAGGCGAATTGCTGCTTCGTTCTACCCTGAAGAGTGAGGACATGT
TTGCTGCTGGAGACTACGGCTATGACGTAGACTGCCCCGAAGATGATGGATAAAGTATTTGGTAGTTAGTTAATCTTTTT
TTTCCTAGTG----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------
>chr5A_819
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------TTATTA--AAAAGCAGCAAAACGCCCACTGAACTCGGACATCGACTCCTATCTG
AAACGTTATGCCCCACGGCCCGGCCGGCCTTTATATATGAACGGCCCGACCGGCTCGTCTCCAACATAGA----ACGATC
GGCTCAAAAAATTAAAAAAAGCATAGAACGATCGATCCA------TCCGATCCCACAGACTGAATCTTCCGCCGCCGCCT
TGCCGGCCTTGCCGTATCGCATGG--------TTTCCGCCGGCCGATAGCCACTCCGACCAGGTTCCCATGCATCTCCCG
TCCCTCTCTTAACCTTTTTCTTTTCTGCTCTGGTCCACGCGCGGGCGC--ACGGCTGCGAACCCACAAGCATGTTTTGAT
TTGTTGTTCACCTTATTAATGTTGAGATTTTTTTTCTCCCTAGGAA-----------------CAGCGATTGATCTA-TT
CGGGCCCGATTAGTTCTATTTTGACTAATCGGTTCGGATTTGCTTGTGGCAAGCTGGGTGACGGAATTGCTTATTTTGCT
CTTTGACGATGTTAGTAC-----------GTACTACATCCATTCTGACTTAATTTTGACTGGA------TTGCAGCATGA
GTGGACTCCGGTTGTTTTAGAGTGTAAACACATCAGGAAACCAGACGGTACTCCGCTCTGACTCCATCTTCACTGCAGGC
CAAATCGTCCAAGAACTAATGCTCATCAACAATACCCAACATACACCACCACCACCACCACC---G---ACCGTCCTCCG
GTGCCTCCCAAAGCCGGAGCGACCAAGGTGGTACGCCTGACCAAGATGCTCTCGCCGGACGATCGCCTTGAG---GACGA
CGGGTTCGATGGCCTGGTGGAGGATGTCACAGAAGAAGCGCGCAAATTCGGTAACCTTGTGATGGTCGTGATCCCGCGGC
CCGGCCCCGGCAGTAGTCCGGCGGTTGCTGGAGCCGGGAAGGCGTTTCTGGAGTACGTGTGCCTCGACAGCTCGTCCCAT
TGCAGGAGGAGTATGGATCGCAGGTGGTTTGCTGAGAGGCGAATTACTGCTGGGTTCTACCA-------TGAGGACATGT
TTGCTGCTGGAGACTACGGCTATGACGTTGACTGCCCCGAAGATGATGGATAAAGTATTTGGTAGTTAATTAATCTCTTG
TTTCTAGTG-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------
>chr5D_834
AAACGCCTA-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------CCTGAATTCGGACACCGACTCCTATCTG
AAACGTCATACCCCACGGCCCGGCCGGCCCTTATATATGAACGGCCCG----GCTCGTCTCCTCCACCTCAGCGACGATA
GGCGGAACCAACCAAACCCCACAAAGGACGATCGATCGGCCCGACTCCGATCCCACCGACGGAATCTTCCGCCGCCGCTG
CCGCC-----GCCGTATCGCATGGCCAACTCCTCTCCGCCGGCCGACGGCCACTCCCACCAGGTTCGCATGCATCTCCCG
CCCCTCTCGTAA-CTTCTTTTTTTCTCTTCTGGTCCACTCGCGGACTC--ACGGCTGCGAACTCACCACAAGCATGCAAT
TCAGGTA-------------------------------------------------------------------------
--------------------TTGACTAATCGGCTCAGATTGGCTTGCGGCAAGTCGGGTGACGGAATTGCTTAATTTGCT
CTTGGACGATGTTTCGT-------CACTAC-AGTACATCCATTCTAACTTAATTTTGGCTGAA------TTGCAGCATGA
GTGGACTCCGGTCGTTTTAGAGTGTAAACACATCAGGAAACCAGACGGTACTCCGCTCCAACTTCATCTTCACTGCAGGC
CAAATCGTCCAAGAACTAATGCTCATCAACAACACCCAACAAACACCACCACCACCACCACA---G---ACCGGTCTCGG
GTGCCTCCCGAAGCCGGAGCGACCAAGGTGGTACGCCTGACCAAGATGCTCTCGCCGGACGATTGCCTCGAG---GACGA
CGAGTTCGAAGACCTGGTGGAGGATGTCACAGAAGAAGCGCGCACATTTGGTAACCTTGTGAAGGTTGTGATCCCGCGGC
CCAGCCCCGGCAGTAATCCGGCGGTTGCTGGAGTCGGGAAGGCATTTCTGGAGTACGCGTGCCTCGACAGCTCGTCCCAT
TGTAGGAGGAGTATGGATCGCATGTGGTTTGCTGGAAGGCGAATTGCTGCTGGGTTCTACCC-------TGAGGACATGT
TTGCTGCTGGAGACTACGGCTATGACGTACACTGCCCTGAAGATGATGGATAAAGTATTTG-TAGTTAATCAATCTCTAA
TTTCTAGTG-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------
>chr5B_935
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------CGATCGATCCA------TCCGATCCCACAGACGGAATCTTCCGCCGCCGCC-
--------TTGCCGTATCGCATGGCCAACTCCTTTCCGCCGGCCCATGGCCACCCCGACCAGGTTCCCATGCATCTCCCG
TCCCTCTCTTAACCTTTTTTTTTCCTGTTCTGGTCCACGCGCGGACGCACACGGCTGCGAACCCACAAGCATGTTTTGAT
ATGTTGTTCAACTTCATGTCGAGAT--TTTTTTTTCTCCCTAGGACTCCCCACTTGATCAGTTCAGCGATTGATCTA-TT
TGGGCCCGATTAGTTCTACTTTGACTAATCGGTTCGTATTTGCTTGCGGCAAGCTGGGTGACGGAATTGCTTAATTTGCT
CTTTGACGATGTTTCATGATTCATCACTAGTAGTGCATCCATTCTAACTTAACTTTGGCTAGA------TTGCAGCATGA
GTGGATTCCGGTTGTATTAGAGTGTAAACACATCAGGAAACCAGACGGTACTCCGCTCCGATTTCATCTTCACTGCAGGC
CAAATCGTTCAAGAACTAATGCTTATCAAGAGCACCCCACAAACACCACCGCCACCACCACC---G---ACCA-------
--GCCTCACGAAGCCGGAGCGACCAAGGTGGTACACCTGACCAAGGTGCCCTCGCCGGACGATGGCCTCGAG---GACGA
TGAGTTTGAAGACCTGGTGGAGGATGTCACAGAAGAAGCGCGCAAATTCAGTAACCTTGTGAAGGTCGTGATCCCGCGGC
CTAGCCCTGGTCGTGATCCCGCG---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------
>chr5D_2031
ATTGTAATTAC---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------TAGTAC
AAATGCCCGTGCGTTGCACCGGGCGGAAAAA--AGGCACAACCTACTTCATAATCTATTAGGCACCATTTTTATATCCAA
TTTTAATAAACATCACTAATAAGG-TAAACATGGAAATGTTATTATTTTTAATAAAATTTAACATTTTCA-TAAATATGG
AACACTTTTTTAAGAACAGTTAATGTTTTTATGAAATTGGAACATTTCTC-TAAAG-AAGAA-CTTTTTGAAAAAGTTGT
-TTTTTCTTGAACATTTCTAAATGGATT--TTTTTAGTAAA-AATGGAACTTTGTTTTT-CGGAACTTTTAAGCCTTTTT
AAAAAGTGCGAACATATT-TTTTG-AAACAAAAATAGTGTGAACATATGTAAAATTGTGAACATT---AAACTATTTTTA
CTGTGTTTAG-TAT-TTTT--ACAGATAG----------------ATTTTTAGGCCCTTTTTGTTAGT-GAATATTT---
ATAGATGGTTGTTTGGTTGGGAAGAGTTTATTCTTTCTTT------AACTATTTGGACTTGACCCAAACAAAGCAGTT--
--------------------------------------------------------------------------------
------------------------------------------------
>chr5D_2031
ATTGTAATTAC---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------TAGTAC
AAATGCCCGTGCGTTGCACCGGGCGAAAAAAA-AGGCACAACCTACTTCATAATCTATTAGGCACCATTTTTATATCCAA
TTTTAATAAACATCACTAATAAGG-TAAACATGGAAATGTTCTTATTTTTAATAAAATTTAACATTTTCA-TAAATATGG
AACACTTTTTTAAGAACAGTTAATGTTTTTATGAAATTGGAACATTTCTC-TAAT----GAA-CTTTTTGAAAAAGATGT
-TTTTTGTTGTACATTTCTAAATGGATT--TTTTTAGTAAA-AATGGAACTTTGCTTTT-CGGAACTTTTAAGCCTTTTT
AAAAAGTGCGAACATATT-TTTTG-AAACAAAAATAGTGTGAACATATGTAAAATTGTGAACATT---AAACTATTTTTA
CTATGTTTAG-TAT-TTTT--ACAGATAG----------------ATTTTTAGGCCCTTTTTGTTAGT-GAATATTT---
ACAGATGGTTGTTTGGTTGGGAAGAGTTTATTCTTTCTTT------AACTATTTGGACTTGACCCAAACAAAGCAGTT--
--------------------------------------------------------------------------------
------------------------------------------------
>chr7A_2037
T------TTAC---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------TAGTAC
AAATGCCCGTGCTTTGCACCGGGCGAAAAAAAGGAGCAGAACCTGCTTCATGTGCCATTGTGGACCATCTTTATATCCAA
TTTCAATAAACGCCGATGATAAGGTTAAACATGGAAACTTTCTTACTTTTAATAAAACTTAAATTTTTCATTAAAATTGG
AACACTTTTTTTAGAATAGTTATG--TTTTACGAAATTCAAACATTTCTC-AAAAAATAACATTTTTTTGAACATATTTT
GTTTTTGTTGTACATTTCTAAATGGAAATATTTTTAGTAAA-A-TGGAATTTT----TTGGGGAATTTTGAATCTTTTTA
AAAAAGTGCGAACGTA-T-TTTTTCAAACAAAAATAGTGTGAACATATGTAAAACTGTGAACATTTTTAAACTATATTTG
CTGTGTTAGG-TTT-TTTTTTGCATATAGTTTTTTTTCATATAGTTTTTTTTAGAGCA--TTTTTAGG-AACTTTTACAA
ATAGTTGGTTGTTTAGTTGGGAAGAGTATTTTCTCTTTTTTTTTCCAAGTATTTTGGCTTGCCCAAAACAAAGCACTTCG
CAACAGCCAGACGCTCGGCCTCATCACAATCATACGCACTCTACTCCTCCATGACCAATCGATATTGCGCCGCCTCCGTC
CGCATCGCCACCTTCTCCTCCTGCAGATTGGTGATCATGGCCATGGCC
>chr6A_2039
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------TGACTAGTAC
AAATGCTTGTGCGTTGCAGGGGGCGAAAAAA-GGAGCACAACCTGCTTCATGTGCCATTGTGGACCATCTTTATATCCAA
TTTCAATAAACGCTGATGATAAGGTTAAACATGGAAACT--CTTACTTTTAATAAAAGTTAACTTTTTCATTAAAATTGG
AACACTTTTTTA-GCATAGTTATG--TTTTATGAAATTCGAACACTTCTC-AAAAA-TAACA-TTTTTTGAACATATTTT
GTTTTTGTTGTACATTTCTAAATGGAAATATTTTTAGTAAAAA-TGGAATTTT----TTTAGGAATTTTGAATCTTTTTT
AAAAAGTGCGAACATA-TTTTTTTCAAACAAAAATAGTGTGAACACATGTAAAACTGTGCACATTTTTAAACTATATTTA
CTATGTTAGG-TTT-TTTT--GCAGATAA----------------TTTTTTTAGAGCA--TTTTTAGG-AACTTTTACAA
ATAGTTGGTTATTTAGTTGGGAAGAGTATTTTCTC---TTTTTTTCAAGTATTTTGGCTTGCCCAAAACAAAGTACTTCT
CAGCACCCAGACGCTCAGCCTGATCACAATCATACGCACTCTGCTCCTCCATGA--------------------------
------------------------------------------------
>chr5B_2041
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------ACTAGTAC
AAAAGCCTGTGCGTTGCACCGGGCGAAAAAA-GGAGCACAACCTGCTTCATGTGCCATTGTGGACCATCTTTATATCCAA
TTTCAATAAACGCCGATGATAAGGTTAAACATGGAAACTTTCTTACTTTTAATAAAAGTTAACTTTTTCGTTAAAATTGG
AACACTTTTTTA-GAATAGTTATG--TTTTATGAAATTCGAACATATCTCAAAAAA-TAACA-TTTTTTGAACATATTTT
GTTTTTGTTGTACATTTCTAAATGGAAATATTTTTAGTAAAAA-TGGATTTTT----TT-GGGAATTTTCAATCTTTTTT
AAAAAGTGCGAACATA-TTTTTGTCAAACAAAAATAGTGTGAACATATGTAAAACTGTGAACATTTTTAAACTATATTTA
CTGTGTTAGG-TTTGTTTT--GCAGATAG-----------------TTTTTTAGAGCA--TTTTTAGGGAACTTTTACAA
ATAGTTAGTTGTTTGGTCGGGAATAGTATTTTATC---TTTTTTTCAAGTATTTTGGCTTGCCCAAAACAAAGCACTTCT
CAGCAGCCAGACGGTCAGCCTCATCACAATCATACGCACTCTGCTCCTCCATGACCAATCGATACTGCGCCGCCTCCGTC
CACATCGTCACCTTCTCCTGCTGCAGATTGGTGATCATGGCCATGGCC
>chr1B_2041
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------ACTAGTAC
AAATGCCCGTGCGTTGCACCGGGCGAAAAAAT-GAGCTCAACCTGCTTCATGTGCCATTGTGGACCATCTTTATATCCAA
TTTCAATAAACACCGATGATAAGGTTAAACATGGAAACTTTCTTACTTTTAATAAAACTTAACTTTTTCATTAAAATTGG
AACACTTTTTTTAGAATATTTATG--TTTTACGAAATTCGAACATTTCTCAAAAAA-TAATATTTTTTTGAACATATTTT
GTTTTTGTTGTACATTTCTAAATGGAAATATTTTTAGTAAAAA-TGGAACTTT----TTTGGGAATTTTGAATCTTTTCT
AAAAAGTGCGAACATA-TTTTTTTCAAACAAAAATAGTGTGAACATATGTAGAACTGTGAACATTTTAAAACTATATTTA
CTGTGTTAGG-TTT-TTTTTTGCATATAG----------------TTTTTTTAGAGCA--TTTTTAGG-AACTTTTACAA
ATAGTTGGTTGCTTAGTTGGGAAGAGTATTT--TCTCTTTTTTTTCAAGTATTTTGGCTTGCCCAAAACAAAGCACTTCT
CAGCAGCCAGACGCTCAGCCTCATCACAATCATACACACTCTACTCCTCCATGACCAATCGATACT------CCTCCGTC
CGCATCGCCACCTTCTCCTCCTGCAGATTGGTGATCATGGCCATGGCC
>chr6A_2041
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------ACTAGTAC
AAATGCCCGTGCGTTGCACCGGGCGAAAAAG-GGAGCACAACCTGCTTCATGTGCCATTGTGGACCATCTTTACATCCAA
TTTTAATAAACACCGATGATAAGGTTAAACATGAAAACTTTCTTACTATTAATAAAAGTTAAATTTTTCATTAAAATTGG
AACACTTTTTT--GAATAGTTATG--TTTTATGAAATTCGAACATTTCTCAAAAAA-TAACATTCTTTTGAACACATTTT
GTTTTTGTTGTACATTTCTAAATGGAAATGTTTTTAGTAAAAA-TGGAATTTT----TTAGGGAATTTTGAATCTTTTTT
AAAAAGTGCAAACATATTTTTTTTCAAACAAAAATAGTGTGAACATATGTAAAACTGTGAACATTTTTAAACTATATTTA
CTGTGTTAGG-TTT-TTTT--GCAGATAG-----------------TTTTTTAGAGCA--TTTTTAGGGAA-TTTTACAA
ATAGCTGGTTGTTTGGTTGGGAAGAGTATTTTCTCTTTTTTCTTTCAAGTATTTTGGCTTGCCCAAAACAAAGCACTTCT
CAGCAGCCAGACCCTCAGCCTCGTCACAATCATACGCACTCTGCTCCTCCATGACAAATCGATATTGCGCCGCCTCCGTC
CGCATCACCACCTTCTCCTCCTGCAGATTGGTGATCATGGCCATGGCC
>chr5A_2041
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------ACTAGTAC
AAATGCCCGTGCGTTGCACCGGACGAAAAAA-GAAGCACAACCTGCTTCATGTGCCATTGTGGACCATCTTTATATCCAA
TTTCAATAAACGCCGATGATAAGGTTAAACATGGAAACTTTCTTACTTTTAATTAAATTTAACATTTTCATTAAAATTGG
AACACTTTTTTTAGAATAGTTATG--TTTTACAAAATTCGAACATTTCTCAAAAAA-TAACATTTTTTTGAACATATTTT
GTTTTTGTTGTACATTTCTAAATGGAAATATTTTTAGTAAAAA-TGGATTTTT----TTTGGGAATTTTGAATCTTTTTT
AAAAAGGGCGAACATA-TTTTTTTCAAACAAAAATAGTGTAAACATATGTAAAATTGCGAACATTTTTAAACTGTATTTA
CTGTGTTAGGTTTT-TTTT--GCAGATAG-----------------TTTTTTTGAGCA--TTTTTAGG-AACTTTTACAA
ATAGTTGGTTGTTTAGTT-GGAAGAGTATTTTCTC---TTTTTTTCAAGTATTTTGGCTTGCCCAAAACAAAGCACTTCT
CAGCAGCCAGACGCTCAGCCTCATCACAATCATACGCACTCTACTCCTGCATGACCAATCGATACTGCGCCGCCTCCGTC
CGCATCGCCACCTTCTCCTCCTGCAGATTGGTGATCATGGCCATGGCC
>SNPs
-------S---------------------------------------------------S----S---------------
------------S-----------------------------------------------------------S-------
----------------------------------------------------S---------------------------
-------------------------------------------------------------------------------S
--------------------------------------------------------------------------------
----------------------------------------------------S---------------------------
---------------------------------------------------S----------------------------
---------------------------------------------------S----------------------------
--------------------------------------------------------------------------------
---------------------------------------------------S-------------S--------------
---------------SS--------S--------------------SS--------------------------------
------------------S--S---------------------------S--S---------------------------
--------------------------------S---------------------------------S-------------
----------------------------------------------------S---------------------------
------------S-------------------------------------------------------------------
---S----------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------S----------------S-------SSSSSSSS-----------
----------------------------------S---------------------------------------------
------------------------------------S----------------------------------------S--
----------------S---------------------------------------------------S-----------
--------------------------S--S--------------------------------------------------
-----S--------------------------------------------------------------------------
--------------------S------------S----------------------------------------------
---------------------S-------------------------------S--------------------------
----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------
------------------------S-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------S--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------S-------------------------------------------------------------------
------------------------------------------------
>forward_1027
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------CGATCCCACAGACGGAATCC-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------
>reverse_2046
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------GTGGTGGTCGTTATTTGGCG---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------
