>input_sequence_71347
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--------------------------------------------ATGCAAATGGCAGCCACCGACCAGAGTAAGACGGCG
ACCAGGAGGTTCGGATGGCTGTACGTGGCGCGGTGGGCGGTGGCGTCCGTGGTGACCGTGCTGGCCGTGGCAGTGATCGT
TCGGGCCGTGGTGGTGATGCTCCGCCCTGAGAAGCTGCAGCTCAAGCTCTCCGGCGGCCGCGTGGCAGTCGACTGGATCC
CGTCGATGCCGCCGCCGGGCAACGAGGTGGCGCTCAACTTCGTCCTAGTGGCCAACAACCCCAGCGGGCGCGCC-TCCGT
CGAGTACACCAACGTCACCGTCCGGCTGACGGACGTCACGAGCGCGTCGTCGCCGTCGCCGACGAAGATCGCCGAGTTCG
ACCTGCCGGAGTCCATCCCGGTGCTGCAGCGGACGGCGCACGAGGCGATGGTGAGGGTGGGGATGACGCCGGGCGAGGAC
GTGCCGATGCGGTACGTGCGGGCGCTCTTCGAGGGGCGCAGCGTCGACGGCGTGGAGATGATGCTGCGCGGGGTGTTCCA
CAGCCACGTGGCC------ATGGCCAGCGGGGACTACGTCACCACCAGCGACCTCGCCACGTACTACTGCTGGCCGGTGA
CCATCGCCGTCGGTGGCCCGTCGTCGTCGTCGTCCTCGTCGCCAGACTACACCAGCGTCGTCGTCACCGACGCGCCGTGC
CTGGACAAGTCGGAGGCCCCGGCCATCGTGTGA-----------------------------------------------
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>chr7A_1_TraesCS7A01G173700
GTCCAACCTCCACCATCTTATTCCTCACGTAGTCACTGGCCAACACAGGACTAACTGCCTACCTCCCACCGCCCCACCCC
CCAAAGCCGGGGGCTTTCGTTGCCCAGCCCTCCCATCGATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNCTTAATCCAATCCCGATTGTCCACGTTATACATTACATAAAACACCTACGTTACTTTACGTAG
GTGTAGCATTGCCCCTCCCCCCTCCACACACACACACCCATAAAGTAGATACTAGGGCAATGGCTTTCCCTAAGATAAAT
AGTGGGGTAATGGCTTTCACCTAAGATAGATAGTGGGGCAATGCCTTCTTTCAAAAATGAATAGTGGGGTTGTCTTCTCT
GATGAAGTTTGTTGCTCTCCGGCGAGGTCCGGCGTGGCAGAAGGAAGGAAGATGATGACAGATGCATAAAATCAGACATC
TAAGAAATATCAAAAGTGATAATAATTAAATCGGCCGCCGAGAGCAAATTGTCTATAAATAGATACCGGTAGTGGTTCCC
ATTCACGAAGACGTACGCAGCGGTAGCTAGCTAATTGATGCATGTTACGTGTGCAACTCTAACGACTGTAGCTTAGCCAG
TAG----TTGCCACTTGTACTCGCACATCCAGAGTTCCATACCGATGCAAATGGCAGCCACCGACCAGAGTAAGACGGCG
ACCAGGAGGTTCGGATGGCTGTACGTGGCGCGGTGGGCGGTGGCGTCCGTGGTGACCGTGCTGGCCGTGGCAGTGATCGT
TCGGGCCGTGGTGGTGATGCTCCGCCCTGAGAAGCTGCAGCTCAAGCTCTCCGGCGGCCGCGTGGCAGTCGACTGGATCC
CGTCGATGCCGCCGCCGGGCAACGAGGTGGCGCTCAACTTCGTCCTAGTGGCCAACAACCCCAGCGGGCGCGCC-TCCGT
CGAGTACACCAACGTCACCGTCCGGCTGACGGACGTCACGAGCGCGTCGTCGCCGTCGCCGACGAAGATCGCCGAGTTCG
ACCTGCCGGAGTCCATCCCGGTGCTGCAGCGGACGGCGCACGAGGCGATGGTGAGGGTGGGGATGACGCCGGGCGAGGAC
GTGCCGATGCGGTACGTGCGGGCGCTCTTCGAGGGGCGCAGCGTCGACGGCGTGGAGATGATGCTGCGCGGGGTGTTCCA
CAGCCACGTGGCC------ATGGCCAGCGGGGACTACGTCACCACCAGCGACCTCGCCACGTACTACTGCTGGCCGGTGA
CCATCGCCGTCGGTGGCCCGTCGTCGTCGTCGTCCTCGTCGCCAGACTACACCAGCGTCGTCGTCACCGACGCGCCGTGC
CTGGACAAGTCGGAGGCCCCGGCCATCGTGTGAACTGAGGCCAGCTCCGCTCCAACGGTAGCCAG----------CTAGG
TGATGCCATGCATTGCCTCCCGCATGGATCAACCAAGAT--ATGCCTACCGATCC----GTCTAGCTATCTGCAATCCAC
TGAGTGTTTACTACATTAGTGTATGTAGTAAAATCGATTGATAACGCATGGATG--------------ATGGCGATCGAT
CGTCGATCGATGGTTGCTG-----CTTGTATGC-------CTGTCAGCGTGGGTTTAATTTGAGACAGAACGTACTCCTT
GCAG----TTAATTGTGCATGTTTCACGACTGACGGCGAGCAGCAGCAGTGCAGAGGCGTGCAGCAGCGCGACCTACCGA
GTCTTTCGCCGTGGCAGGTTTACCATTCCCTACACGCGACGCTAGCTGTC-TTGGTACGTATGCCTAGGTTAGGGCTAT-
-------------------------------CTAGAAGCAGGACATGTCCTTTGAGAAAGTTAATGGAAGGTGGCAGGTC
AGGTCGGAGCCAAGATGCATGCACTGGCAGCCGGCACAGGTGGTGGACAAGGAGTAACTACGTGCTGGAGCATGCATGTG
TTCGGTGCAGGGATATTGGGCACGAGAGCAACAGTATTGAAGTAGTTAGGGCATCTCCAGCTGTTCGGTTCCCCGGGGCG
TCTAAATAGAGCGGCTTGGGGCGTGCCGACGCTAGTTCGGCCCCTGGGGTGACCTAGCTCCCAGTCACGCCCCCAAGCGG
CAGCCCCAGGATGCGGGAAATTTGAACTAGGTCGTTCCCTCTCACAAAAGACACCACAAATCCGGCGATCAGACGTAGTT
TGGCGTTACAAAAAACAGAGCGCCGCACGCCGCAAGTTCGTGTGCGCAACGAATCACTCGGCGGGGTCGGCTCCAGGCGT
TGGCGGAGTCGGCGTGCGCGGGCTCGGCGGTGTCGGAGCTGCTTCGGTGCTGGGCTGTGTCGGCGTGGCTTCGGTACTGC
TGGGCGGCGATGTGGAGGCGTCGTTCGGACTTGGCGTCCGTGTGGCCGTGGGCGCGGGAGCTGTCGTCGTCG
>chr7D_822
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---------------------ATAATTAAATCGCTCGCCGAGAGCAAATTATCTATAAGTAGATACCGGAAGTGGTTCCC
ATTCACGAAGACGTGCGCAGTGGTAGCTAGCTAATTGATGCATGCTACGTGTGCAACTCTAACAACTGTAGCTTAGCCAG
TAG----T-GCCACTTGTACGCGCACATCCAGAGTTCCAGACCGATGCAAATGGCAGCCACCGAGCAGAGCAAGACGGCG
ACCAGGACGTTCGGATGGCTGTACGTGGCGCGGTGGGCGGTGGCGTCCGTGGTGACCGTGCTGGCCGTGGCGGTGATCGT
TCGGGCCGTGGTGGTGATGCTCCACCCCGAGAAGCTGCAGCTGAAGCTCGCCGGCGGCCGCGTGGCAGTCGACTGGATCC
CGTCGATGCCGCCGCCGGGCAATGTCGTGGCGCTGAACTTCGTCCTCAGGGCCAACAACCCCAGCGGGCGCGCC-TCCGT
CGAGTACACCAACGTCACCGTCCGGCTCACGGACGTCACGAGCGCGTCGTCGCCGTCGCCGACGAAGATCGCCGAGTTCG
ACCTGTCGCAGTCCATCCCCGTGCTGCAGCGGACGGCGCACGAGGCGATGGTGAGGGTGACGATGACGCCGGGCGAGGAC
GTTCCGATGCGGTACGTGCGGGCGCTCTTCGAGGGGCGCAGCGTCGACGGCGTGGAGATGATGCTGCGCGGGGTGTTCCA
CAGCCACGTAG------CGATGGCCAGCGGGGACTACGTCACCACCAGCGACCTGGCCACGTACTACTGCTGGCCGGTGA
CCATCGCCGTCGGTGGC------TCGTCCTCCTCGTCGTCGCCGGACTACGCCAGCGTCGTCGTCACCGACGCGCCGTGC
CTGGACAAGTCGGAGGCCCCGGCCATCGTGTGAACTGAGGCCAGCTCCGCTCCAACGGTAGTAGCTAC-----------G
TGATGCCATCCGTTGCCTCCCCCATGGATCAACCAAGCT--ATGCCTACCGATCC----ATCTAGCTACCTGCAATCTAC
TGTA--TTTACTAAATTAGTGTAC--GGTAGAATCGATTGATAAGGCATGG-----------------ATGGCGATTGAT
CGTCGACC-ATTGTTGCTG-----CTTGTATGC-------CTGTCAGTGTGACTTTAATTTGAGACAGCACGTACTCCTT
GCAG----TTAATTGTGCATGTGTCACGACTGACGACGAGCGGCACTGCG----------GCAGCAGCCCGACCTACCGA
GTCTTTCGCCGTGGCAGGTTTAACATTTACTACACGCGACGCTAGTTGTC-TTGGTACGTATGGCTAGACTAGCTATCTA
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>chr7B_822
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---------------------ATAATTAGATCGCTCGCCGAAAGCAAGTTATCTATAAATAGATAGCGGAACTGGATCTC
ATTCACGAAGACGTACGCAGTGGTAGCTAGCTAATTGATGCATGCTAAGTGTGCATCTCTAACGACTGTAGCTTAGCCAG
TAGTAGTT-GCCACTTGTACGCGCACATCCAGAGTTCCAGACCGATGCAAATGGCAGCCACCCAGCAGAGCAAGACGGCG
ACCAGGAGGTTCGGATGGCTGTACGTGGCGCGGTGGGCGGTGGCATCTGTGGTGACCGTGCTGGCCGTGGCGGTGATCGT
TCGGGCCGTGGTGGTGATGCTCCGCCCGGAGAAGCTCCAGCTGAAGCTCGCCGGCGGCCGCGTGGCAGTCGACTGGATCC
CGTCGATGCCTCCGCCGGGCAACGTCGTGGCGCTGAACTTCGTCCTCAGGGCCAACAACCCCAGCGGGCGCGCC-TCCGT
CGAGTACACCAACGTCACCGTCCGGCTCACGGACGTCACGAGCGCGTCGTCGTCGTCGCCGACGAAGATCGCCGAGTTCG
ACCTGTCGCAGTCCATCCCCGTGTCGCAGCGGACGGCGCACGAGGCGGTCGTGAGGGTGACGATGACGCCGGGCGAGGAC
GTGCCGATGCGGTACGTGCGGGCGCTCTTCGAGGGGCGCAGCGTCGACGGCGTGGAGATGATGCTGAGCGGGGTCTTCGC
CAGCCACGTAACGACGA---TGGCGAACGGGGAG---GTCACGACCAAGGACCTCGCCACGTACTACTGCTGGCCGGTGA
CCATCGCCGTCGGTGTCTCGTCGTCGT------CCTCGTCACCGGACTACACCAGCGTCGTCGTCACCGACGCGCCGTGC
CTGGACAAGTCGGAGGCCCCGGCCATCGTGTGAACTGAGGCCAGCTCCGATGGTAGCTAGCTAGGAGCCTAGGACCTAGG
TGATGCCATCCATTGCCTCCCGCATGGATCAACCAAGCTACATGCCTACCGATCC----ATCTAGCTATCTGCAATCTAC
TGTA--TTTACTAAATTAGTT--TGTGGTAGAATCGATTGATAAGGCAAGG-----------------ATGGCGATTGAT
AGTCGATCCATGGTTGCTG-----CTTGTATGCCCTGTCACTGTCAGCGTGAGTTTAATTTGAGATAGCACGTACTACTT
CTTTCAAATTAATTGTGCATGTGTCACGACTGACGACGACACGACGAGCG----------GCAGCAGCGCGACCTACCGA
GTCTTTCGCCGTGGCAGGTTTAACATTTACTACACGCGACGCTACCTTTCGTTGGTACGTATGGCTGGGCTAGGGCTATC
TAGGTAGAGTACGTGTAGTAATACTACCGTCCTAGAAGCAGGACATGTCCTTTAAGAAAATTAATGAAAGTT-GCAGGTC
AGGTCGGAGCCAAGATGCATGCACTGGCAGCCGGCACAGGTGGTGGACGAGCAGTAACTACGTGCTGGAGCAGGCATGTG
TTCGGTGCAGGGATGTT-GGCACGAGAGCAACAGCATTGAAGTGGTTA--------------------------------
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>chr7A_981
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------------------------ACTTCCAGAGTTCCGGACTGATGCATATGGTAGCCACCGACCAGAGCAAGACGGCG
ACCAAGAGGTTCGGATGGCTGTACGTGGCGCGGTGGGCGGCGGCGTCCGTGGTGACAGTGCTGGCCGTGGCAGTGATCAT
TCGGGCCGCGGTGCTGATGCTCCGCCCCCAGAAGCTCCAGTTCAGGCTCTCCGGGGGCCATGTGGCAGTCGACAGGATCC
CGTCGATGCCGCCGCCTGACAACGTCGTGACGCTCACCTTCGTCTTCGTGGCCTACAACCCCAGCGGGCGCGCCCTCCGG
CGAGTACAACAACGTCACCGTCCGGCTCACGGACATCACGAGCGCGTCGTCGGCGTCGCCGACGAAGATCGCCGAGTTCG
ACCTGCCGCTGCCAATCGCCGTGTCGCCGAGGATGGCGCAAGAGACGATCGTGATGGTGGGGATGACGCCGGGCGAGGAC
GTGCCGATGCGGTACGTGCGGGCGCTCTTTGAGGGCCGCAGCGTCGAAGGCGTGGAGCTGATGCTGAGCGGGGTCTTCGC
CAGCCACGTAACGACGACGATGGCCAGCGGGGAA---GTCACGACCAGGTACCCCGCCACGTACTACTGCTGGCCGGTCA
CCATCGCCGTCGGTGGCTCGTCGTCGT------CGTCATCGCCGGACTACACCAGCTTCGTCGTCACCGACGCGCCGTGC
ATGGACGAGTCGGAGGCCCCGGCCATCGTGTGATTTGAGGCTAGCTCCGACGGTAGCAAGCTACTAGTAGTTG-------
---------------------GTATGGATCAACAAAGCT--ATGCCCGACTGATCTACTATCTACCAAGCTGCAATCTT-
------TTCACCAAACTAATGTA------AGAATCGGTTGATAAGGCCGGCTACATGCCTGGATGGTCATGGCGATTGAT
CGTCGACCCATCCATGGCTGCTGCCTTGCATGC-------CTGTCAGTGTGAGTTTAATTTGGGACA-CACGTACTCCTT
GCGG----TTAATTGTGCGTGTTTTACGACTGACGACGAGCAGCAGCAGTGCAGAGGCGTGCAGCAGCGC----------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSS------------SS---------------S------------------S----------
--------------------S-----------------------S-----------------------------------
--------S-----------S------------------S------------------------------S---------
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---------------------------S----------------------------------------------------
------------------------SS--------------------S---------------------------------
---------------------------S----------------------------------------------------
--------S----------S------------------------------------------------------------
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---------S--S-------------------------------------------------------------------
-----------------S----------S--S-----------S------------------------------------
-------------------------------------------------------------SSS----------------
---------S---------------------------S---------------------S-----------------S--
--SSSS-------S------------S---S-------------S------SSS----------------------S---
--------S------------------------------------------S----------------S-----------
-----------------------------------S--------------------------------------------
----------------------S----SS----------------------------------S-----S----------
-----------------------------------------------------S-----S------S---S-S-------
------------------------------------------------S--S--------------------S-------
--------------S--S----------------S--------S----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_44
------------------------TCACGTAGTCACTGGCCAAC------------------------------------
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>reverse_1743
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--------------------------------------------------------------CAGCTAGGTGATGCCATG
CA------------------------------------------------------------------------------
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