>input_sequence_71336
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-----------------------------------------------------ATGCC-----------ATTGCCGTCTC
CGGCAGCA---AGCACCCCACGCA-------------TTACATTTACATTACCACACC----AA------CAGCGCAAAC
AAGAGAAGCGCAGGAAGAACCAGACAGAAGCTAGC------GC-TAGCAGCAGCACACACGCGACGACCAAGAGACATAC
AGGGGCGTACGGCGGGGAAATGGGCCTGTGTGTCTCATACGACGCTGCGCCCGACGGCCCGGCGACAGCCAGGGTGGTTC
TCCCCAGCGGCGAGCTCCGGGAGTACTCGCCGCCCGCAACGGCGGCGCTCGCGTTGGAGGAGGTCGGCGAGAAGGGGTGG
TTCCTGTGCGACGCCGACAGGATGGGGTTCGAGGGCTCCGTCGCGGCGGTGGCCGGCGGCGAGGAACTCCAGCCGGGGCA
GATCTACTTCGTGCTCCCGAGCGAGATGCTGCGCCGCCGCCTCGCCCCCGAGGAGGTGGCCTCGCTCGCCGTCAAGGCCA
GCGCCGCCCTCGTCAGGGCCTCCACCGTGTCGTCAGCCGGCGGCCGGCGCCGGCGGGGCTCCGTGGCGCCGCTCGTGTTC
GCGCCGTCCGACGAGGACTACTCGGCCGAGGATGCCTTCACCTTGGCGACGTTCGCTGCGAAGCCGACGGTGGCGCAGAA
GCGGAGGGTGGCGTACCGAGGCGGCAGGTCGCCGCCGAGGTTCTCGCCCGACTTAACCGCCATCTCCGAGAGCGAGTAG-
--------------------------------------------------------------------------------
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-----------------------------------------------
>chr5A_1_TraesCS5A01G403900
CTACAATGTCATGTGAGTATTAAAATTGTATTGGTTCAGTAGCAAAACTAAAAAGGATTTCAATCTGTATCCCAATGGAC
ATCGATTGTGGTTCAGATTACAGGGAGGTGCGCCTCCGTGTGTTCTTCGTCCGCCTCCATATATCACTTAGCTAATATAT
GCTGCTAATCTCGTGGCACATAGTGAATCGATGGGTTCCCCGATAAAATCTGGAAGGGAAAGTTGCATGCTTAGCGACAT
GGTTGTTTGGAATGAACATTTTTTTCGAAACGAACATTTTGATCCATCAAAACAGCAGTTCGATGTGACATTTACATTGT
GATCTTGTCAAGTTGTTTTTTTAAGGAAGCCTCTTGGCGCACTTTATTGATGATTAAAAAGGATTACATCGCTCAATACG
CCACTTCTAGTAAAACTTCTGCTCCGAGTTGCAAGCTACTCCCTCCGTGAAGAAATATAAAAGCGTTTAGATTATTATTT
TAGTGATCTTTACACTCTTATATTTCTTTGTAGAGGGAGTACAACGTTGTACAACCTCACTCACAGTCATTGAATCATTC
GTTCTTCGCAACCGTTGGATGCCAATCTGGGGGCAGTGAGCTGTCTTGCTGGTTTGTTTCCTGAATGTGTTTTTTTTTCT
TCCTGAAGAACGCATTGCCGCGTTTGATTGTACGTACATATTTGGACTGTACCTCACCATGTTTCGTTGTAACTTGTAGT
CCGTCCATTCCCGCGTAAAGGCTGGGCGGATACGCCATGTACGCAGTCCAACTTAACCGCGTACAGGCCGGAGCTCACCG
TGAGCTTGATCA------GAAT-AATATCTTCTTCACCGAGTAGCCAATTGACTGTGACCGCAACGAAAAGC----CC-G
CCGAGTCCACGGCTCCACGGCATCCGCTGGCCGCAACAAA-CCTCCAGCCAGGCTGTGCTGCCCCCACTCCCGCCTACAC
GACACCGCTCCCTCTGCCTCCCCGCTGCGTCTCCCTCTGCCGCTCCGCTATATATGCC-----------ATTGCCGTCTC
CGGCAGCA---AGCACCCCACGCA-------------TTACATTTACATTACCACACC----AA------CAGCGCAAAC
AAGAGAAGCGCAGGAAGAACCAGACAGAAGCTAGC------GC-TAGCAGCAGCACACACGCGACGACCAAGAGACATAC
AGGGGCGTACGGCGGGGAAATGGGCCTGTGTGTCTCATACGACGCTGCGCCCGACGGCCCGGCGACAGCCAGGGTGGTTC
TCCCCAGCGGCGAGCTCCGGGAGTACTCGCCGCCCGCAACGGCGGCGCTCGCGTTGGAGGAGGTCGGCGAGAAGGGGTGG
TTCCTGTGCGACGCCGACAGGATGGGGTTCGAGGGCTCCGTCGCGGCGGTGGCCGGCGGCGAGGAACTCCAGCCGGGGCA
GATCTACTTCGTGCTCCCGAGCGAGATGCTGCGCCGCCGCCTCGCCCCCGAGGAGGTGGCCTCGCTCGCCGTCAAGGCCA
GCGCCGCCCTCGTCAGGGCCTCCACCGTGTCGTCAGCCGGCGGCCGGCGCCGGCGGGGCTCCGTGGCGCCGCTCGTGTTC
GCGCCGTCCGACGAGGACTACTCGGCCGAGGATGCCTTCACCTTGGCGACGTTCGCTGCGAAGCCGACGGTGGCGCAGAA
GCGGAGGGTGGCGTACCGAGGCGGCAGGTCGCCGCCGAGGTTCTCGCCCGACTTAACCGCCATCTCCGAGAGCGAGTAGA
GGACTAGAGGTGCATGGTACACGAGACTGCCAA-AAAAAA----GGGGCGCATCGTTGCACATAGCCCTGCCTCGCCTGG
CCACGACTG------ACGCGTGGGCCCGTCCGCTGATGCTAGATCGGACGGCGGGGACGCGGAGATGGGCGCGGCAAATG
TTTGAT---------------------------------------ATGTGGATGTGTGCAGCTAGTTTCTGAGAGTGTGG
GGTGGCCGTG-------GTAGAAATAGTCGCGTCTTCGGCGTTGTTAATTTA--AACGTCAGAAGCACG-AGGAAATGCA
CATACAGATATGCATGTCAATGTAATGTAAATACTGCACCCGCATCAAAAATGTAGATAATGTATAAATGA--TTGGAGT
ATGTATGCTCGGTCACTGGCCTGAATTCCTTGCAATAATTCATGCCTCTCTCATAT------------------------
--TACCTTGCTGGAATTCGTGTCCCTATGTAAGTTTTTCTTTTTGGAAAAGGAACTCACTGCTATCTATCATCAGCTCAC
CAGGAAGCGAAAGAATTCGCGGGAAACGCGGGTGGATTCGAGTGTGTGGGTTAGGCTGCTCACATAAAGGAAAGAGAAGA
CGAGGTCGAAATTGTCCGGACAGTAATAAAAGCAAGTTAGGGTTCGTCACCAGCGGGAAATCAGTCCTCGTTTGGACGGA
TCGACAGTCCAGCGGAGCAGAGAAGCTGTGGATGAGGAGGACGACGGTGGTGACCGTGGAGTGAGACGAGAATCCCTTGC
AGGCGGCGTTCCTCTGTGGGAGGAGTCCTGGACCCGGGGGCGGGTGCTCGGCCGACGGAGTGGAGCGCGATGACCGTCAT
ATCCCTATGTAAGTTATATAGCATATATGATTTTGGAAATATATTGCAGAAATTGGGGCATCTCTCGCTGAAATTTGGGA
ACCTACACAATTTTTATGGAGTCATATACGTCTTCAGAAATACATTGCAAGAATTTGGGCCGCCTCCGCAAATTTGTGGT
GTCGTGCTTTCCCCGACTCCGTGCTTTGGCGCGGTTTTCGGGCCGAG
>chr5B_520
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------TACAACGCTGTACAACCTCCCTCACACTGATTGAATCATTT
GTTCTTCACAACCGTTGGATGCTAATCTGGGGA-AGTGAGCTGTCTTGTTGGTTTGTTTTCCGAATGTGTTTC--TTCCT
TTCTGAAGAACGCATTGCCGCGTCTGATTGTACGTACATATTTGGACTGTACCTCACCATGTTTCGTTGTAACTTGTACT
CCGTCCATTCCCGCGTACAGGCTGGGCGGGTACACCATCTACGTAGTCCAACTTAACCGCGTACAGGCCGGAGCTCACCG
TGAGCTTGATTTC-----GAATAAATTTCTACCTCACCGAGTAGCCAATTGACTGTGATCGCAAC---GAAAAGCCCG-C
CGAG---------TCCACGCCATTCGCTGGCCGCAACAAA-CCTCCAGCCAGGCTGTGCTGCCCCCACCCCCGGCTACAC
GACAACCCTCCCTCTGCCTCCCCGCTGCGTCTCCCTCAGCCGCCCCGCTATATATACC-----------ATCGCCGTCTC
CGGCAGCA---ACCACACCACGCA-------------TTACATC------ACCACAGACAGAAA------CAGCGGAAAC
AATAGAAGAACCAGG----CAGAA-----------------GC-TAGCAGCAGCACACACGCGACGACCAAGAGACATAC
AGAGGCGTACAGCGGGGAAATGGGCCTGTGTGTGTCATACGACGCGGCGGCCGACGGCCCGGCGACAGCCAGGGTGGTGC
TCCCCAGCGGCGAGCTCCGGGAGTACTCGCCGCCCGCAACGGCAGCGCTCGCGCTGGAGGAGGTCGGCGAGAAGGGGTGG
TTCCTGTGCGACGCCGACAGGATGGGGTTCGAGGGCTCCCTCGCGGCCATGGCCGGCGGCGAGGAGCTCCAGCCGGGGCA
GATCTACTTCGTGCTCCCGAGCGACATGTTGCGCCGCCGCCTGGCTCCCGAGGAGGTGGCCTCGCTTGCCGTCAAGGCCA
GCGCCGCCCTCGTCAAGGCCGCCACCGTGCCATCAGCCGGCGGCCGGCGCCGGCGAGGCTCCGTGGCGCCGCTCGTGTTC
GCGCCGTCCGAGGAGGATTACTCGGCCGAGGATGCCTTCACCCTGGCGACGTTCGCTGCGAAGCCGACGGTGGCGCAGAA
GCGGAGGGTGGCGTACCGAGGCGGTAGGTCGCCGCCGCGGTTCTCGCCCGACTTAACCGCCATCTCCGAGAGCGAGTAGA
GG--------CGCATGGTACACGAGACAGCCGACAAAAAAAA---GGGCGCATCGTTGCACATAGCCCTGCCTCGCCTGG
CCACGACTG------ACGCGTGGGCCCGTCCGCTGATGCTAGATCGGACGGCGGGGACGCGGAGATAAACGCAT------
------------------------------CAAACGCTTGATAGGATGTGGATGTGTG--------------GAGTGTGG
GGTGGCCGTG-------GTAGAAATAGTCGCGTCTTCGGCGTTGTTAATTCA--AATGCCAGAAGCACA-AGGAAATGCA
CATACATATAGGCATGTCAATGTAATGTAAATATCGCACCCGCATAAAAAATGTAGATACTGTAAAAAATGATGTGGAGT
ATGTATGCTCGGTTACTGGGCTGAATACCTTGCAATAATTCATGCCCCTCTCAAATTACATAGCTAGATCAGATTTTGAA
GATACCTTGCTGGAATTCGTAGCCCTATGTAAGTTATAAAGC--------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------CATATATGATTTCGGAAATATATTGCAGAAACTGGGGCATCTCTCGCTGAAATTTGGGA
ACCTACACAAATTTTGTGGAGTCATATACGTCTTCAGAAATATATTGCAAGAATTTGGGCCGCCTCCGCAAATTTTATGG
AGTCATGC---------------------------------------
>chr5D_554
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------ATCATTC
GTTCTTCGCAACCGTTGGATGCTAATCCGGTGGCAGTGAGCTGTCTTGTCGGTTTGTTTTCTGAATGTGTTT--TTTCCT
TTCTAAAGATCGCATTGCCGTGTTTGATTGTACGTATATATTTGGACTGTACCTCACCATGTTTCGTTGTAACTTGTACT
CCGTCCATTCCCGCGTACAGGCTGGGCGGGTACGCCATGTACGCAGTCCAACTTAACCGCGTACAGGCCGGAGCTCACCG
TGAGCTTGATCAGAATAAGAATAAATATCTTCTTCACCGAGTAGCCAATTGACTGTGACCGCAAC---GAATAGCCCG-C
CGGAGTCCACGGCTCCACGGCATC-GCTGGC-ACAACAAA-CCTCCAGCCAGGCTGTGCTGCCCCCACTACCGGCTACAC
GACAATGCTCCCTCTGCCTCCACGCTGCGTCTCCCTCAGCCGCTCCGCTATATATACC-----------ATCGCCGTCTC
CGGCAGCA---AGCACACCACGCA-------------TTGCATT------ACCACAAG----AA------CGGCGCAAAC
AAGAGAAGCGCAGGA----CA----AGTAGCCAGACAGAGAATTTAGAAGCCGCACACACGCGACGACCAAGAGACATAC
AGTC------------GAAATGGGCCTGTGTGTGTCATACGACGCGGCGGCCGACGGCCCGGCGACGGCGAGGGTGGTTC
TCCCCAGCGGCGAGCTCCGGGAGTACTCGCCGCCCGCAACGGCAGCGCTCGCGCTGGAGGAGGTCGGCGAGAAGGGGTGG
TTCCTGTGCGACGCCGACAGGATGGGGTTCGAGGGCTCCCTCGCGGCGGTGGCCGCCGGCGAGGAGCTCCAGCCGGGGCA
GATCTACTTCGTCCTCCCGAGCGAGATGCTGCGCCGCCGCCTCGCCCCCGAGGAGGTGGCCTCGCTTGCCGTCAAGGCCA
GCGCCGCCCTCGTCAAGGCCGCCACCGTGTCATCAGCCGGCGGCCGGCGCCGGCGAGGCTCCGTGGCGCCGCTCGTGTTC
GCGCCGTCCGAGGAGGACTACTCGGCCGAGGATGCCTTCACCCTGGCGACGTTCGCTGCGAAGCCGACGGTGGCGCAGAA
GCGGAGGGTGGCTTACCGAGGCGGCAGGTCGCCGCCGAGGTTCTCGCCCGACCTAACCGCCATCTCCGAGAGCGAGTAGA
GG--------TGCATGGCACACGAGACTGCCAA-AAAAAAAA---GGGCGCATCGTTGCACATAGCCCTGCCTCGCCTGG
CCCCGACTA------ACGCGTGGGCCCGTCCGCTGATGCTAGATCGGACGGCGGGGACGCGGAGATAGACGCGGCAAATG
CTTCTTTTTTTTTTGAGTGGACGCGCGCGGCAAATGCTTGATAGGATGTGGATGTGTG--------------GAGTGTGG
GGTGGCCGTG-------GTAGAAATAGTCGCGTCTTCGGCGTTGTTAATTTA--AACGCCAGAAGCACA-AGGAAATGCA
CATACAGATATGCTTGTCAATGTAATGTAAATACAGCGCCCGCAAAAAAAATGTAGATACTGTAT-AAATGTTTTGGAGT
ACGTATGCTCGGTTACTGGCCTGAA-------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------
>chr5A_786
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------GGCCGGAGCTCACTG
TTAACTTGATCG------GAATAAATATCTTCTTCACCGGGTAGCCAATTGACTGCGCTTGCAAAGAAGAAAAGCTCC-G
CCGAGTCCACGGCACCACGGCATTCGCTGGCCGCCACAAA-CCTCCAGCCAGGCTGTGCTGCCCCCACACCCGGCTACAC
GACAGCGCTCCCTCTGCCTCCCCG----------CTCAGCCGCTCCGCTATATATACC-----------ATCGCCGTCTC
CGGCAGCA---ACCACACCAGACACCACGCATTACATTTACATC------ACCACAAC----AA------CAGCGCGAAC
AAGAGAAGCGCAGGA----CA----AGA----------------------------ACACGCGGCGACCA----------
AGAC------------GAAATGGGCCTGTGTGTGTCGTACGACGCGGCGGCCCACGGCCCGGCGACCGCGAGGGTGGTGC
TCCCCAGCGGCGAGCTCCGGGAGTACTCGCCGCCCGCGACGGCAGCGATGGCTCTTGAGGAGGTGGGGCACCAGGAGTGG
TTCCTCTGCGACGCCGACGCGATGGGGTTCGAGGGCTCCGTCGCGGCGGTGGCCAGCGGCGAGGCGCTCCTGCCGGGGCA
GATCTACTTCGTGCTCCCCAGCGACATGCTGCGCCGCCGCCTCGCCCCCGGGGAGGTGGCATCGCTCGCCGTCAAGGCCA
GCGCCGCCCTCGTCAAGGCCGCCACCGTGTCATCAGCCGGCAGCCGGCGCCGTCGGGGCTCCGTGGCGCCGCTCGTGTTT
GAGCCGTCCGAGGAGGACTACTCGGCCGAGGATGCCTTCACCATGGCGACGTTCGCGGTGAAGCCGATGGTGGCGCAGAA
ACGGAGGGTGGCGTACCGAGGCGGCAGGTCGCCACCGAGGTTCTCGCCCGACTTAACCGCCATCTCCGAGAGCGAGTAGA
CG--------TGCAGCGCAGACGAGACTGCCAA-AAA---------GGGGCATTTTTGCACATAGCCTTGCCTTGCCTGG
CCGCGACTG------AGGCGTTGGCCTGGCCGCTGATGCTAGATCGGACGGCGAAGATGCGGACATAGCCGCGGCACATG
CTTG--------------------------------------------TGGATATGTGGA--------------------
--------------------------------------------------------------------------------
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-----------------------------------------------
>chr5B_786
--------------------------------------------------------------------------------
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-----------------------------------------------------------------GGTCGGAGCTCACCG
TGAGCTTGATCA------GGATAAATATCTTCTTCACCGAGT------------GCGGTTGCAACGAAAAGC----CC-G
CCGAGTCCACGGCTCCACGGCGTTCGCTGGCCGCAACAAA-CCT----CCAGCCTGTGCTGCCCCCACTCGCGGCTACAC
GACAACGCTCCCTCTGCCTCCACG----------CTCAGCCCCTCCGCTATATATACC-----------ATCGCCGTCTC
CGGCAGCA---AGCACACCACGCA-------------TTGCATT------ACCACAAC----GA------CAGCACGAAC
AAGAGAAGCGCAGGCAGGACA----AGAAGCTAGCA------C-CAGCAGTAGCACACACGCGACAACCA----------
AGAC------------GGAATGGGCCTCTGTGTGTCGTACGACGCGGCGACCGACGGCCCGGCGACCGCGAGGGTGGTGC
TCCCCAGCGGCGAGCTCCGGGAGTACTCGCCGCCCGCAACAGCCGCGCTGGCGCTGGAGGAGGTGGGCCAGCAGGGGTGG
TTCCTCTGCGACGCCGGCAGGATGGGGTTCGCGGGCTCCGTCGCGGCGATGGCCGCCGGTGAGCAGCTCCAGCCGGGGCA
GATCTACTTCGTGCTCCCCGCAGAGATGCTGCGCCGTTGCCTTACAGGCGAGGAGGTGGCCTCGCTCGCCGTCAAGGCCA
GTGCCGCCCTCGTCAAGGCCGCCACCGCCTCGTCAGCCGGTGGCCGGCGCCGGCGGGGCTCGGTGACGCCGCTTGTGTTC
ACGCCATCCGAGGAGGACTACTCTGACGAA---------ACCTTGGCGAAGTTTGCAGTGAAGACGGCGGTGCCGCAGAA
GCGGAGGGTGGCCTACCGAGGCGGGAGGTCGCCGCCGCGGTTCTCGCCCGACTTAACCGCCATTTTGGAGAGCGAGTAGA
GG--------TGCAGGGCACACGAGACTGACAG-AAAAAGTA---GGGGCGCAT--------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------
>chr5D_786
--------------------------------------------------------------------------------
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-----------------------------------------------------------------GGTCGGAGCTCACGG
TGAGCTTGATCA------GAATATATATCTTCTTCACCGAGTAGCCAATTGAGTGCGGTTGCAACGAAAAGC----CC-G
CCGAGTCCACGGCTCCACGGCGTTAGCTGGCCGCAACAAA-CCT----CCAGCCTGTGCTGCCCCCACTCCCGGCTACAC
GACAACGCTCCCTCTGCCTCC-----------TCCTCAGCCCCTCCGCTATATATACC-----------ATCGCCGTCTC
CGGCAGCA---ACCGCACCACGCA-------------TTGCATT------ACGACAAC----AA------CAGCGCGAAC
AAGAGAAGCGCAGGA----GA----AGAAGCTAGCA------C-CAGCAGCAGCACACACGCGGCGACCAAGAGACATAC
AGAC------------GGAATGGGCCTGTGTGTGTCGTACGACGCGGCGGCCGACGGCCCGATGACCGCGAGGGTGGTGC
TCCCCAGCGGCGAGCTCCGGGAGTACTCGCCGCCCGCGACGGCGGCGATGGCGCTGGAGGAGGTGGGCCAGCAGGGGTGG
TTCCTCTGCGACGCCGACAGGATGGGGTTCGAGGGCTCCGTCGCGGCGGTGGCTGCCGGCGAGGAGCTCCAGCCGGGTCA
GATCTACTTCGTGCTCCCCACAGAGATGCTGCGACGCTGCCTCACAGGCGAGGAGGTGGCCTCGCTCGCCGTCAAGGCCA
GCGCCGCCCTCGTCAAGGCCGCCACCGCCTCGTCTGCCGGCGGCCGGCGCCGGCGAGGCTCCGTGGCGCCGCTCGTGTTC
GCGCCGTCCGAGGAGGACTACTCGGACGAA---------ACCTTGGCGACGTTTGCAGTGAAGCCGGCGGTGCCGCAGAA
GCGGAGGGTGACCTACCGAGGCGGGAGGTCGCCGCCGAGGTTCTCGCCTGACTTAACCGCCATTTTGGAGAGCGAGTAGA
GG--------TGCCGGGCACACGAGACTGACAG-AAAAAAAA---GGGCGCATTTTTGCACATAGCCCTGCCGCGCCTAG
CCGCGAGAG------ATGTGTGGTTCCTGCCGCTGATGCTAGATCGGACGG-----------------------------
--------------------------------------------------------------------------------
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>chr5D_851
--------------------------------------------------------------------------------
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---------------------------------------------------------ACCGCAAA---GAAAAGCCCGTC
CTGAGTCCACGGCTCCACGGCCTC-GCTGGCCACAACAAAGCCT----CCAGCCTGTTCTGCCCCCACACCCGGCTACAC
GACAACGCTCCGTCTGCCTCCCCGCTGCGTCCTCCTCAGCCGCTCCGCTATATATACC-----------TCTTCCGTCTC
CGGCAGCAGAGAGCACACCACACT-------------TTACATT------ACCACAAC----AA------CAGCGCAGAC
GAGAGAGGAACAAGA----CAGTAGCA--------------AG-CAGCAGCAGCACACACGCGACGACCAAGA-------
---C------------GGAATGGGCCTCTGTGTGTCGTACGACGCGGCGGCCGACGGCCCGGCGACCGCGAGAGTGGTGC
TCCCCAGCGGCGAGCTCCGGGAGTACTCGCCGCCCGCGACGGCGGCCATGGCGCTGGAGGAGGTGGGCCAGCAGGGGTGG
TTCCTCTGCGACGCCGACAGGATGGGGTTCGAGGGCTCCGTCGCGGCGGTGGCTGGCGGCGAGGGGCTCCAGCCGGGGCA
GATCTACTTCGTGCTCCCCGCAGAGATGCTGCGCCGCTGCCTCACCGGTGAGGAGGTGGCCTCGCTTGCCGTCAAGGCCA
GCGCCGCCTTCGTCAAGGCCGCCACCGCCTCGTCTGCCGGCGGCCGGCGCCGGCGAGGCTCCGTGGCGCCGCTCGTGTTC
GCGCCGTCGGAGGAGGACTACTCTGACGAA---------ACCTTGGCGAAGTTTGCAGTGAAGCCGGCGGTGCCGCAGAA
GCGGAGGGTGGCCTACCGAGGCGGGAGGTCGCCGCCGAGGTTCTCGCCTGACTTGACGGCCATCATGGAGAGCGAGTAGA
GC--------CGCGGAGCGCACGAGACTGCCAG-AAAAGAAAA-----GGCATCTTTGCACATAGCCCTGCCTCGCCTGG
CCGCGAGAG------ATGCGTGG--CCAGCCGCTGATGTTAGATCGGACGGGGGAGACGCGGAGATTAACGCGACAAGT-
--------------------------------------------------GATATGTGGAGTTAGTTTCTCGAGTTGGAT
CGTAGAGGG--------------ATAGTCGCGTTTTGGACGTTGTTAATATA--GACGTCAGAAACAAGTAGGGAATGCA
CATACAGATATGC-------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------
>chr5A_859
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------------GAAAAGC----CC-G
ACGAGTCCACGGCTCCACGCCATTCGCTGGCCGCAACAAA-CCTCCAGCCAGGCTGTGCTGCCCCCACACCCGGCTACAC
GACAACGCTCCCTCTGCCTCCCCGCTGCGTCTCCCTCTGCCGCTCCGCTATATATACCTCTTCCTCCCCATCACCGTCTC
CGGCAGCA---ACCACACCGCGCA---------------ACATT------ACCACCGC----AA------CAGCGCGAAC
AAGAGAAGAACCAGA----CAGTAGCAAGC--AGCA------G-CAGCAGTAGCACACACGTGACGACCA----------
AGAC------------GGAATGGGTCTTTGTGTGTCGTACGACGCGGCGGCCGACGGCCCGGCGACCGCGAGAGTGGTGC
TCCCCAGCGGCGAGCTCCGGGAGTACTCGCCGCCCGCGACGGCGGCGATTGCGCTGGAGGAGGTGGGCCAGCAGGGGTGG
TTCCTCTGCGACGCCGACAGGATGGGGTTCGAGGGCTCCGTCGCGGCGATGGCGGCCGGCGAGGAGCTCCAGCCGGGGCA
GATCTACTTCGTCCTCCCCGCAGAGATGCTGCGCCGCCGCCTCACCGGCGAGGAGGTGGCCTCGCTCGCCGTCAAGGCCA
GCGCCGCCCTCGTCAAGGCCGCCACCGCCTCCTCTGCCGGCGGCCGGCGCCGGCGAGGCTCCGTGGCGCCGCTCGTGTTC
GCGCCGTCGGAGGAGGACTACTCGAACGAA---------ACCTTGGCGACGTTTGCCGTGAAGCCGGCGGTGCCGCAGAA
GCGGAGGGTGGCCTTCCGAGGCGGGAGGTCGCCGCCGAGGTTCTCGCCTGACTTGACGGCCATCCTGGAGAGCGAGTAGA
GC--------CGCGGAGCGCACGAGACTGCCAG-AAAAGAAAA------GCATCTTTGCACAAAGCCCTGCCTCGCCTGG
CCGCGAGTG------ATGCGTGA-CCCGGCCGCTAATGTTGGATCGAACGGCGGCGACGCGG------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------------------------------------------
>chr5A_872
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---AGTCCACGGCTCCATGCCATTCACTGGCCGCAACAAA-CCTCCAGCCAGGCTGTGCTGCTCCCACTCCCGGCTACAC
GACAATGCTCCCTCTGCCTCCCCGCTGCGTCTCCGTCAGCCGCTCCGCTATATATACC-----------ATCGCCGTCTC
CGGCAGCA---AGCACACCACGCA-------------TTACATT------ACCGCAAA----AACAGCGTCAGCGCGAAC
AAGAGAAGCGCAGGA----CA----AGAAGCTAGCAGCAGCAG-CAGCAGCAGCACACAGGCGGCGACCAAGA-------
---C------------GAAATGGGCCTGTGTGTGTCGTACGACGCGGCGGCCGACGGCCCGGCAACCGCGAGGGTGGTGC
TCCCCAGCGGCGAGCTCAGGGAGTACTCGCCGCCCGCAACAGCCGCGCTGGCGCTGGAGGAGGTGGCCCATCAGGGGTGG
TTCCTGTGCGACGCCGACAGGATGGGGTTCGCGGGCTCCGTCGCGGCGATGGCCGCCGGTGAGCAGCTCCAGCCGGGGCA
GATCTACTTCGTGCTCCCCGCAGAGATGCTGCGACGCTGCCTCACCGGCGAGGAGGTGGCCTCGCTTGCCGTCAAGGCCA
GCGCCGCCCTCGTTAAGGCCGCCACCGCCTCGTCTGCCGGCGGCCGGCGCCGGCGGGGCTCGGTGACGCCGCTCGTGTTT
GCACCATCCGAGGAGGACTACTCGAACGAA---------ACCTTGGCGAAATTTCCAGTGAAGCCGGCGGTGCCGCAGAA
GCGGAGGGTGGCCTACCGAGGCGGGAGGTCGCCGCCGCGGTTCTCGCCCGACTTAACCGCCATTTTGGAGAGCGAGTAGA
GG--------TGCAGGGCACACGAGACTGACAG-TAAAAAAA---GGGCGCATTTTTGCACATAGCCCTGCGCCGAGTAG
CCGCGAGAG------GTGCGTGGTTTCGGCCGCTGATGTTAGATCGGACGGCGG--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------
>chr5B_877
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------ACGGCTCCACGGCATTCGCTGGCCGCAACAAA-CCTCCAGCCAGGCTGTGCTGCCCCCACTCCCGCCTACAC
GGCAACGCTCCCTCTGCCTCCCCGCTA----------TGCCGCTCCGCTATATATACC-----------ATCGCCGTCTC
CGGTAGCA---ACCACACCACGCA-------------TTGCATT------ACCACAAC----TA------CAGCGCGAAC
AAGAGAAGAGCAGGA----CA----AGAA-------------C-CAGCAGCAGCACACACGCGGCGACCAAGA-------
---C------------GAAATGGGCCTGTGTGTGTCGTACGACGCGGCGGCCGACGGCCCGGCGACCGCGAGGGTGGTGC
TCCCCAGCGGCGAGCTCCGGGAGTACTCGCCGCCCGCGACGGCAGCGGCGGCTCTTGAGGAGGTGGGGCACCAGGAGTGG
TTCCTCTGCGACGCCGACGCGATGGGGTTTGAGGGCTCCGTCGCGGCGGTGGCCAGTGGCGAGGCGCTCCGGCCGGGGCA
GATCTACTTCGTGCTCCCGAGCGATATGCTGCGCCGCCGCCTCGCCCCCGAGGAGGTGGCATCGCTCGCCGTCAAGGCCA
GCGCCGCCCTCGTCAAGGCCGCCACCGCCTCGTCAACCCGAGGCCGGCGCCGTCGGGGCTCGGTGGCACCGCTCGTGTTC
GAGCCGTCCGAGGAGGACTACTCGGCCGAAGATAGCTTCACCTTGGCGACGTTCGCGGTGAAGCCGACGGTGGCGCAGAA
ACGGAGGGTGGCGTACCGAGGCGGCAGGTCGCCGCCGCGGTTCTCGCCCGACTTAACCGCCATTTTGGAGAGCGAGTAGA
GG--------TGCAGAGCACACGAGACTGCCAG-AAAAGAAAAAGGAGGGCATTTTTG----------------------
--------------------------------------------------------------------------CACATG
CTTG--------------------------------------------TGGATATGTGGAGTTAGTTTCTAGTGGTAC--
------------------TAGAAATAGTCGCGTCTTCGGCGTTGTTAATTTATATACGTCAGAAGCACTGTATAAATATC
GC-ACATAAAGATATGTCAATATAATGTAAATATTGCACCCGC-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------
>chr5D_877
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------ACGGCTCCACGGCATTCGCTGGCCGCAACAAA-CCTCCAGCCAGGCTGTGCTGCCCCGATTCCCGGCTACAC
GACAACGCTCCCTCTGCCTCCCCGCT----------CAGCCGCTCCGCTATATATACC-----------ATCGCCGTCTC
CGGCAGCA---ACCACACCACACA-------------TTGCATT------ACCACAAC----AA------CAGCGCGAAC
AAGAGAAGCGCAGGA----CA----AGAAGCTAGC------AG-CAGCAGCAGCACACACGCGGCGACCAAGA-------
---C------------GAAATGGGCCTGTGTGTCTCGTACGACGCGGCTGCCGACGGCCCGGCGACCGCGAGGGTGGTGC
TCCCCAGCGGCGAGCTCCGGGAGTACTCGCCGCCCGCAACGGCAGCGCTGGCGCTTGAGGAGGTGGGGCACCAGGAGTGG
TTCGTCTGCGACGCCGACGCGATGGGGTTTGAGGGCTCCGTCGCGGCGGTGGCCAGCGGCGAGGCGCTCCGGCGGGGGCA
GATCTACTTCGTGCTCCCGAGCGACATGCTGCGCCGCCGCCTCGCCCCCGAGGAGGTGGCATCGCTCGCCGTCAAGGCCA
GCGCCGCCCTCGTCAAGGCCGCCACTGCCTCATCAGCCGGCGGCCGGCGCCGGCGAGGCTCCGTGGCGCCGCTCGTGTTC
GCGCCGTCCGAGGAGGACTACTCGGCCGAGGATAGGTTCACTTTGGCGACGTTCGCGGTGAAGCCGACGGTGGCGCAGAA
ACGGAGGGTGGCGTACCGAGGCGGCAGGTCACCGCCGCGGTTCTCGCCCGACTTAACCGCCATTCTGGAGAGCGAGTAGA
GG--------TGCAGGGCACACGAGACTGCCAG-AAAAAAAAA-GGGGGGCATTTTTGCACATAGCCCTGCCTTGCCTGG
CCGCGACTGCGACTGAGGCGTTGGCCCGGCCGCTGATGCTAGATCGGACGGCGAAGATGCGGAGATAGCCGCGGCACATC
CTTG--------------------------------------------TGGATATGTGGAGTTAGTTTCTCAGAGTCAGA
GACTCAGAGTGGTAGAAGTAGAACTAGTCGTGTCTTCGGCGTAATCGGTTAG--TACGTCAGAAGCACTGTATAAATATT
GC-ACATACAGATATGTCAATGTAATGTAAATATTGCACC----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------S-----------S------S-S------------
----------------------S-------------------------S----------S------------SS---S--
-S----------------------------------------------------------------------------S-
-----------------S-----------S--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----S--------------------------------------------------S------------------------
----------------S---------------------------SSSSSS------S-----------------------
-----------------S--SSS-S-------------------------------------------------------
--S-------S----------------------------------S---S------------------------------
-----------------------------------------------------S--------------------------
-----------------------------------------------------------------S--------------
--------------------------------------------------------------------------------
---------------S----S-----------------------------------------------------------
-----------S--------------------------------------------------------------------
--------------------------------------------------------------------------------
--SSSSSSSS----------------------------------------------------------------------
------------------------------------------------------------------S-S-----------
S---S-----------------------------------------------------S--S--------S---------
--------------------------------------------------------------------------------
---------------------------------------------S-------------S--------SSS---------
-------------S------------S-------------------S------S--------------------------
--------------------SS-------------S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSS------------S------------------S---------------------------
----------S----S--------------------------S--------------------------------SSS-S
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_433
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------AACTTCTGCTCCGAGTTGCA-----------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------
>reverse_2357
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------TTCGAGTGTGTGGGTTAGGC------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------
