>input_sequence_71285
--------------------------------------------------------------------------------
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------------------------------------------------------------------------ATGGCACG
GTCGGAGCTGGCCATGGCGTTGCTGGTGGTGGTCCTCGCCGCCGGCTGCTGCGCGCCGGCGGCCGCCGTGGCGTACCTCT
CCAAGCTGCCTGTGACCCTCGACGTCACGGCATCCCCCAGTCCCGGCCAAGGTACGTCCGTCGC-ATAT-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---GC-----AT--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------CTCACGGATTGGTGTTAAC-----AAAGACAGAGAACGG
AAACAAGGA--------------------------TCTTCT-TAACGCTAACGACTA-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------AA-TCAACTGATCCTTGACCAGTTCTTCACGCCGGCGAGGACGTGATCACGGTGACGTGGGCC
CTGAACGCGAGCCAGCCGGCCGGCAAGGACGCCGAATACAAGAACGTGAAGGTGAGCCTCTGCTACGCGCCGG-------
-----TGAGCCAGAAGGAGCGCGAGTGGCGCAAGACCCACGACGACCTCAAGAAGGACAAGACCTGCCAGTTCAAGGTCA
CCCAGCAGGCCTACCCCGGCACCG---GCAA---GGTCGAGTACCGCGTCGCCCTCGACATCCCCACCGCCACCTACTAC
--------------------------------------------------------------------------------
-------------------------------GTGCGCGCCTACGCGCTCGACGCCTCCGGCACGCAGGTCGCCTACGGCC
AGACCGCGCCCGCCTCCGCCTTCAACGTCGTCAGCATCACCGGCGTCACCACCTCCATCAAGGTCGCCGCCGGCGTATTC
TCCGCCTTCTCCGTCGCCTCCCTCGCCTTCTTCTTCTTCATTGAGAAACGCAAGAAGAACAACTAA--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-
>chr6D_1_TraesCS6D01G193200
GTACAATGGCATTGTTCCAAAGGGAGCCTAGATATGAAACCTGTACAATTGCTAA-------CGTTTTATACAATTCTTG
CTGTGCTAGGTTGTTGATGATTCATCTGCACCGGTGGCTCCTCCTAACGTTTTAT------------------------A
CAAGTCAAATGGCTTCTCTTACGTTCTGATTGATAAAGCCAA-----GTGAAGCAAATAATGCACCCTTGTAGCCTTTGG
TTATGGCTAAGAGTCACGTGAACTAT------GTATGCCTCGGACCTCTTGTTGTATTGCAATGGCTTTTTAACTGCCGT
TTTCAATGTCGGCATGTTTTTGCTGTCAACAAATTCAACATGGAGAAACATATGGAAATCCGTTGAGCTTTTTGGCTGCA
GTCCGTTGCACAATAAAATTAACAATAGTTTTTTCTTTTCTTTTTGGG-ATAAAATTTGCAACAGCTAGGTGAACACTTT
GTAAGCTAATTGCAGCTGTAGACAAG---GAAGGCTAACTGCACTAGAAATGCTCTCCCTCATAGTCGGCTGCCACTCAG
GACGCGACGCTCAGTCTGCC--AATGTCTGGATGGATATGGAC-AGAAATGTCGACGATGATACATGTACTCGACTGGGG
ACGAGCTAATAGTTCTTGTTTGGAACGCAAGCACATAGAACAAAAAATCGAG-ATTTTTTCAATAATTAGCTCAGTTAAT
GACTCCTGCCGCAGCTT-AATTTGCAGTCGCCGCATCTCGCTCTTCCGGACCCTCTAGAGCATCCGCT-----G------
-------GCCGGAGAAGACAAAATAAATAAAAACTACC---AGTTGATGATCTGACTTTCGATCGTAATTAG--------
--GTTAATCAAATGGGTGCCCCGGCTCCTCGAACGCAAGAGGGATGGCAGCTCCAGCTCATGGTCGGCGCTCTCGAC---
-GTGCCTACATATACACGCTAAACCCACCCGTACTCGTCCATCTCT------CCCA------TCCATCAAACCGCCGCAA
CCTTCTCTGACCGAGCAGCTGC---------GAGTTCGAGCCCAAGTTCCAAGCTAGAATCGCGGCG-----ATGGCACG
GTCGGAGCTGGCCATGGCGTTGCTGGTGGTGGTCCTCGCCGCCGGCTGCTGCGCGCCGGCGGCCGCCGTGGCGTACCTCT
CCAAGCTGCCTGTGACCCTCGACGTCACGGCATCCCCCAGTCCCGGCCAAGGTACGTCCGTCGC-ATAT-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---GC-----AT--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------CTCACGGATTGGTGTTAAC-----AAAGACAGAGAACGG
AAACAAGGA--------------------------TCTTCT-TAACGCTAACGACTA-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------AA-TCAACTGATCCTTGACCAGTTCTTCACGCCGGCGAGGACGTGATCACGGTGACGTGGGCC
CTGAACGCGAGCCAGCCGGCCGGCAAGGACGCCGAATACAAGAACGTGAAGGTGAGCCTCTGCTACGCGCCGG-------
-----TGAGCCAGAAGGAGCGCGAGTGGCGCAAGACCCACGACGACCTCAAGAAGGACAAGACCTGCCAGTTCAAGGTCA
CCCAGCAGGCCTACCCCGGCACCG---GCAA---GGTCGAGTACCGCGTCGCCCTCGACATCCCCACCGCCACCTACTAC
--------------------------------------------------------------------------------
-------------------------------GTGCGCGCCTACGCGCTCGACGCCTCCGGCACGCAGGTCGCCTACGGCC
AGACCGCGCCCGCCTCCGCCTTCAACGTCGTCAGCATCACCGGCGTCACCACCTCCATCAAGGTCGCCGCCGGCGTATTC
TCCGCCTTCTCCGTCGCCTCCCTCGCCTTCTTCTTCTTCATTGAGAAACGCAAGAAGAACAACTAAACTCGGAAGTCAGA
ACCGTGGCGATGTGTTCGTC------TGTGCGCGA---CT---TCTTGTCCTTTGCAACGTACTCCCTCCGTTCCTAAAT
ACTTGTCTTTCTAGGCATTTCAACAAATGACTACATACGGAGTAAAATGAGTGAATCTACACTCTAAAATATGTCTACAT
ACATCCGTTTGTGATAGTCATTTGAAATGCCTAGAAAGACAAGTATTTAGGAACGGAGGGAGTACGTACAAT--------
---------TGTACTGTACTGTATATGTAAGAGAGTGTT-GATGTTTCCTTTTTCTTTTTCGGAGACTCTCGTATATAA-
---------------------------------TTGGTTATGTTGTAATACCACCGATGGGCATATCTTCTAGGAAC---
-----AAAAACGGACGAGTTCTTCACATTTG-------------TTTTCACATTTTATTTTAATGGTAGAAATGAGATTG
GAT-CAAAAACCCTGAAAACCAATACATAAACAAAGAGCCGGTTCTTGTCTGGGTCAAGCAGTTTTAATTTTTTTTTAAA
AGATTTGCCATTTTCATTAGTTAAGAGAGGAATTTTAACAGAGACCCGCAAGGCGGGGAG------AAGAGATAAGTGCC
CAT-------------------------------------------AAAAAGGGCCTTCTCTTTGATCCTAGCGGTAACA
ATGGTCGCAGTGGCAACATTATTCCTAAAAATTCTAATGGTATGCTCATTTCAAAGCTCCCAGGAAACAGACATGCACAA
GTAAGTGAGGGCCTTCCTCGAGGGCCCTCCTATCCAGGACAATCATGAAGCACAAGTCCTTGACCGAGACCTCGTGCCGC
CAATTCGTGGTAATGTCATTGTTGAGACCGATCCACGAAGCCACATCCACCCAAACGCGTTGGGAGAATCTGCGATGGAA
TAGAAGGTGAGGCGCAGATTCATTAACATGCTTGCAGAGTGGGCAAATGCCACAATTGGGCCAGCCCTGCTGTTCCACTC
CAAAATTGGCAACAAAAAAAAAACGATTCTTCCCCCTGACAGCTGGGACCCACCAGCTATATCTTCACACGGAAGGAAGT
G
>chr6B_16
---------------TCCAAAGGGAGCCTAGATATGAAACCTAAATAATTGTGACCCTTCTGCGTTTTATACAGTTCTTG
CTGTGCTAG---GTTGATGATTCATCTGCACCGGTGGCTCCTCCTATCACTCTCATGGCTTGTAAATGAGTAGCTGTCCA
CAAGTCAAATGGCTTCTCTTACGTTGTGATTGATAGAAAAAGTGAAGGTGAAGCAAATAATGCACCCTTGTAGCCTTTGG
TTATGGCCTAGAGTCACGTGACCTATGTATCTGTATGCCTCGGACCTCTTGTTGTACTGCAGCGAC-T-TTAACTGCCGT
G-TCAATGTCGGCATACTTTTGCTGTCAACAAATTCAACATGGAGAAACATATGGAAATCCGTTGAGTTTTCTGGCAGCA
GTCCGCTGCACAATAAAATTTGCAGCATG---TTGTTTTGTTTTTGGGTATAAAATTTGCAACAGCTAGTTGAACACTTT
GCAAGCTACGTAATTG--------------------------------------------CATAGTCGGCTGCCACTCAG
GACGCGACGCT-AGTCTGGC--AATGTCTGGATGGCTAATGGGTAGAAATGTCGACGATGATACATGTAGTCGATTGAGG
ACGAGCTAATAGATCTTGTTTGGAACGGAAGCACAGAGAACAAAAATTCGAGAAATTTTCCAAGAATTAGCTCAGTTAAT
TACTCCTGCCGCTGCTTAAATTTGCAGTCGCCGCATCTCGCTCTTCCGGACCCTTTGGAGACCCTCTAGAGCAG------
-------GCCGGAGAAGACAAAATAAATAAAAACTACTCCTA---GATGATCTGACTTTCGACCACCTAAATAAGTTAAC
TAGTTAATCAGATGGGTGCCCCGGCTCCTCGACCGCAACAAGGATGGCAGCTCCAGCTCATGGTCAGCGCTCTCGAC---
-GTGCCTACATATACATG-TAAACCCATCCGTACTCC---ATCTCTCCCATCCATCA-----------AAACCACCGCAA
CCTTCTCTGACCGAGCAGCTGC---------GAGCTCGAGCCCAAGTTCCAAGCTAGAATCGCGGCG-----ATGGCACG
GTCGGAGCTAGCGATGGCGTTGCTGGTGGTGGTCCTCGCCGCCGGCTGCTGCGCGTCGGCGGGCGCCGTGGCGTACCTCT
CCAAGCTGCCTGTGACCCTCGACGTCACCGCATCCCCCAGCCCCGGCCAAGGTACGTCCGTCGCTATAT-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---GC-----AT--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------CACACGGATTGGTGTTAAC-----AA---GACAGAGCGG
AAACACGGA--------------------------TCTTCT-TAGCGCTAACGACTA-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------AA-TTAACTCATCCTTGGCCAGTTCTTCACGCCGGCGAGGACGTGATCACGGTGACGTGGGCC
CTGAACGCGAGCCAGCCGGCCGGCAAGGACGCCGACTACAAGAACGTCAAGGTGAGCCTCTGCTACGCGCCGG-------
-----TGAGCCAGAAGGAGCGCGAGTGGCGCAAGACCCACGACGACCTCAAGAAGGACAAGACCTGCCAGTTCAAGGTCA
CCCAGCAGGCCTACCCCGGCACCG---GCCA---GGCCCAGTACCGCGTCGCCCTCGACATCCCCACCGCCACCTACTAC
--------------------------------------------------------------------------------
-------------------------------GTGCGCGCCTACGCGCTCGACGCCTCCGGCACCCAGGTCGCCTACGGCC
AAACCGCGCCCGCCGCCGCCTTCAACATCGTCAGCATCACCGGCGTCACCACCTCCATCAAGGTCGCCGCCGGTGTATTC
TCCGCCTTCTCCGTCGCCTCCCTCGCCTTCTTCTTCTTCATTGAGAAACGCAAGAAGAACAACTAGATGTGGAGATCGGA
ACCGTGGCAAAGTGTTCGTC------CGTGCGCGACTTCT---TCTTGTCCTTTGCAACGTACGC---------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------ACAAT--------
---------TGTACTGTACTGTAT--GTAAGAGAGTGTT-GCTGTTCCCTTTTTCTTTTTCGGAGAGTCTCGTATATAAT
TGGTTATGTTGATATTGGGAAAAAGGAAAAAATTTGGTTATGTTGTAATAACACCGATGGGCATGTCTTTAGGAACAAAA
ACGGAGAAAACGGATGAGTTCTTCACATTTG-------------TTTT--------------ATGGTAGAAATGAGATTG
GAT-CAAAAACCCTGAAAACAAATACATAAACAAAGAGCCCGTTCTTGTCTGGGTCAAGCATTTTTTTTAAA-TTTCAAA
AGATTTGCCACTTTCATTGGTTAAGT--------------GAGACCCGCGAGGCGGGGGT------AAGAGAGTCAACTC
TCGCGGCATTACATTACACAAATGATGAGCACCCCACAAGCGCCCAAAAAAGGGCCTCCTCTTTGATCCCCGCGGTAACA
ATGGTCGCAGTGGCGACGGTATTCCTAAAAATTCTTGCGTTATGCTCATTCCAAAACTCCCAGGAAACAAGCTTGCACAA
GGAGGTGAGGGCCTTCCTCGAGG-CCCCCCTATCCAAGACAGCCATGAACCACAAGT-CTTGACCGAGACCTTGTGCCGC
CAATCCGTGGTAATGCCATTGTTGAGACCGATCTACGAAGCCACATACACCCAAACGCGTTGGGAGAATCTGCAATGGAA
TAGAAGGTGAGGCGCAGATTCATTAACTTGCTTACAGAGTGGGCAAAGGCCACAATTGGGCCAACCCTGCTGTTCCA---
--------------------------------------------------------------------------------
-
>chr6A_129
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------A
CAGGTCAAATGCCTTATCTTACGTTCTGATTGATGAAGCCAA-----GTGAAGCAAATAATGCAGCCTTGTAACCTTTGG
TTATGGCTAAGAGTCACGTGACCTAT------GTATGCCTCGGACCTCTTGTTGTATTGCAATGGCTT-TTAACTGCCGT
G-TCAATGTCGGCATGTTTTTGCTGTCAACAAATTCAACATGGAGAAACATATGGAAATCCGTTAAGCTTTTTGGCTGCA
GTCCGTTGCACAATAAAATTAACAATAGTTTTTT----------TGGA-ATAGAATTTGCAACAGCTATGTGAACACTTT
GTAAGCTAATTGCAGCTGTAGACAAGAAGGAAAGCTGACTGCACTAGAAATGCTCTCCCTCATAGTCGGCTGCCACTCAG
GACGCGACGCTCAGTCTGCCAAAATGTCTGGATGGATATGGAC-AGAAATGTCGACGGTGATACATGTACTGGACTGAGG
ACGAGCTAATAGTTCTTGTTTGGAACGCAAGCACATAGAACAAAAAATCTAG-AATTTTTCAATAATTAGCTCAGTTAAT
GACTCCTGCCGCAGCTT-AATTTGCAGTCGCCGCATCTCGCTTTTCCGGACCCTTTGGAGACCCTCTAGAGCAGCCAGAC
AGCTCCGGCCGGAGAAGACAAAATAAATAGAAACTAGTACTAGTTGATGATCTGACTTTCGATCGTAATTAG--------
--GTTAATCAAATGGGTGCCCCGGCTCCTCGACCGCAAGAGGGATGGTAGCTCCAGCTCATGGTCAGCGCTCTCGAC---
-GTGCCTACATATACATG-TAAACCCATCCGTACTCCTACATCTCT------CCCA------TCCATCAAACCGCCGCAA
CCTTCTCTGACCGAGCAGCTGC---------GAGCTCCAGCCCAAGTTCCAAGCTAGAATCGCGGCG-----ATGGCACG
GTCGGAGCTGGTCATGGCGTTGCTGGTGGTGGTCCTCGCCGGCGGCTGCTGCGCGTCGGCGGGCGCCGTGGCGTACCTCT
CCAAGCTGCCTGTGATCCTCGACGTCACCGCATCCCCCAGTCCCGGCCAAGGTACGTTCGCCGT-ATAT-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---GC-----ATCT------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------CACGCCTCACGGATTGGCGTTAAC-----AA-GACATAGAGCGG
AAACAAGGA--------------------------TCTTCT-TAACGCTAACGACCA-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------AC-ATAACTGATCCTTGACCAGTTCTTCACGCCGGCGAGGACGTGATCACGGTGACTTGGGCC
CTGAACGCGAGCCAGCCGGCCGGCAAGGACGCCGACTACAAGAACGTGAAGGTGAGCCTCTGCTACGCGCCGG-------
-----TGAGCCAGAAGGAGCGCGAGTGGCGCAAGACCCACGACGACCTCAAGAAGGACAAGACCTGCCAGTTCAAGGTCA
CCCAGCAGGCCTACCCCGGCACCG---GCAA---GGTCGAGTACCGCGTCGCCCTCGACATCCCCACCGCCACCTACTAT
--------------------------------------------------------------------------------
-------------------------------GTGCGTGCCTACGCGCTCGACGCCTCCGGCACGCAGGTCGCCTACGGCC
AGACCGCGCCCGCCGCCGCCTTCAACATCGTCAGCATCACCGGCGTCACCACCTCCATCAAGGTCGCCGCCGGCGTCTTC
TCCGCCTTCTCCGTCGCGTCGCTCGCCTTCTTCTTCTTCATTGAGAAACGCAAGAAGAACAACTAAACTCGGAAGTCGGA
ACCGTGGCAAAGTGTTCGTCTTCGTCCGTGCGCGATTTCT---TCCTGTCCTTCGCAACCTACGC---------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------ATAATTGTACGGA
AAAATGTACTGTACTGTACTATAT--GTAAGAGATTGTTTGATGTTCCCTTTTTCTTATCCGGAGACTCTCGTATATAA-
---------------------------------TTGGTTATGTTGTAATACAACCGATGGGCATGTG---TAGGAAC---
-----GAAAACGTACGAGTTCTTCATATTTGTTTTCATATTTTATTTT--------------ATGGTAGAAATGAGATTG
GGTACAAAAACCTTGAAAACAAATACATAAACAAAGAGCT--------------------AGTTGTTAGTTCTTTTCAAA
AGATTTGCCAGTTTTATTTATTAAGA--------------GAGGAGTTTTAGCAGATATCCGGGAGAAGAAAGTCAACTC
TCGCGGTATTACATTACATAAATAGCTAA-----------CGCCCAAAGATGGGCCTACCCCTTGATCCTATCAATAACA
ATGGTCGCAGTGGCGGCGGTATGCCTAAAAATTCTTGTGTTGCGCTCACTCCAAAGCTCCCAGCAAACAAGCATGAGCAA
GGAGGCGAGGGCCTTCCTTGAGG-GCCCCCTGTCTAGGACAATCATGAAGCACAAGTCCTTGACCGAGACCTCGTGCCGC
CAATCCGTGATAATGTCATTGTTGAGACCGATCCACGAAGCCACATCCACCCAAACATGTTCGGAAAATCTGCAATGGAA
TAGAAGGTGAGGCACAGATTCATTAACTTGCTTGCAGAGTGGGCAAAGGCCATAATTGGGCTAGCCCTGTTGTTCCA---
--------------------------------------------------------------------------------
-
>chr5D_815
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------TGCCCCGGCTCCTCGACCCCAACAAGGATGGCAGCTCCGGCTCATCGTCAACGCTCTCGATCGA
GCTGCCTACATATACACGCCAAACCCATCCGTACTCCCCCATCTCTCCCAGCCCCA------TCCATCAAACCGCCGCAA
CCTTCTCCGACCGAGCAGCAGCTGCGAGTTCGA--TCGAGCCCAAGTTCGA-----------CGGCG-----ATGGCACA
GTCGAAGCTGGTCATGGCGTTGCTGGTGGCGGTCCTCGCCGCCGGCTGCTGCGCGTCGGCCGGCGCCGTGGCGTACCTCT
CCAAGCTTCCTGTGACCCTCGACGTCATCGCATCCCCCAGCCCCGGCCAAGGTACCACCGTCGT-ATGT-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---GCAACGCATTCTCGTTAAC----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------AAA---AATAGAGCGT
AAGCAAGCA--------------------------TCTTCTTTAACACTGACGACCA-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------AA-TTGACTGATCATCGACCAGTTCTCCATGCCGGCGAGGACGTGATCACAGTGACGTGGGCC
CTCAACGCGTCTCGGCCGGCCGGCGACGACGCCGCCTACAAGAACGTGAAGGTCAGCCTCTGCTACGCGCCGG-------
-----CGAGCCAGAAGGAGCGCGAGTGGCGCAAGACCCACGACGACCTCAAGAAAGACAAGACCTGCCAGTTCAAGGTCG
CCCAGCAGCCCTACGCCGGCGCCG---GCGGCAGGGTCGAGTACCGCGTCGCCCTCGACATCCCCACCGCCACCTACTAC
--------------------------------------------------------------------------------
-------------------------------GTGCGCGCCTACGCGCTCGACGCCTCCGGCACGCAGGTCGCCTACGGCC
AGACCGCGCCCGCCGCCGCCTTCAACGTCGTCAGCATCACGGGCGTCACCACCTCCATCAAGGTCGCCGCCGGCGTCTTC
TCCACCTTCTCCGTCGTCTCCCTCGCCTTCTTCTTCTTCATTGAGAAGCGCAAGAAGAATAACTAAGCTCAGAACCGTA-
--CGTGGCAAGGTGTTCGTC------CGTGCGCGACTTCTTCCTCTTGTCCTTTGCAACGTAC-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-
>chr4A_815
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------TGCCCCGCCTCCTCGACCCCAACAAGGATGGCAGCTCCGGCTCATGGTCAACGATCTCCAA---
-GTGCCTACATATACACGCTAAACCCATCCGTACTCCTCCATCTCT------CCCAGCCCCGTCCATCGAACCGCCGCAA
CCTTCTCCGACCGAGCAGCAGCTGCGAGTGCGAGTTCGAGCCCAAGTTCGA-----------CGGGCGATCAATGGCACG
GTCGGAGCTGGTCATGGCGTTGCTGGTGGCAGTCCTCGCCGCCGGCTGCTGCGCGTCGGCCGGCGCCGTGGCGTACCTCT
CCAAGCTGCCCGTCACCCTCGACGTCACCGCATCCCCCAGCCCCGGCCAAGGTACCACCGTCGT-ATAT-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---GC-----ATTCTTGTTAA-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------TTAAC-----AA-GACGTAGAGCTG
TGAT------------------------------------------ACTGACGACTA-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------AA-TTAACCGATCCTCGACCAGTTCTCCACGCCGGCGAGGACGTGATCACGGTGACGTGGGCC
CTGAACGCGACCGGGCCGGCCGGCGACGCCGCCGCCTACAAGAGCGTCAAGGTCAGCCTCTGCTACGCGCCGG-------
-----CGAGCCAGAAGGAGCGCGAGTGGCGCAAGACCCACGACGACCTCAAGAAGGACAAGACCTGCCAGTTCAAGGTCG
CCCAGCAGCCCTACGCCGGCGCCG---GCGGCAGCGTCGAGTACCGCGTCGCCCTCGACATCCCCACCGCCGCCTACTAC
--------------------------------------------------------------------------------
-------------------------------GTGCGCGCCTACGCGCTCGACGCCTCCGGCACGCAGGTCGCCTACGGCC
AGACCGCGCCCGCCGCCGCCTTCAACGTCGTCAGCATCACGGGCGTCACCACCTCCATCAAGGTCGCCGCCGGCGTCTTC
TCCACCTTCTCCGTCGTCTCCCTCGCCTTCTTCTTCTTCATTGAGAAGCGCAAGAAGAATAACTAAGCTCGGAACCGTA-
--CGTGGCAAGGTGTTCGTC------CGTGCGCCACTTCT---T------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-
>chr5B_842
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------ATGGCAGCTCCAGCTCATGGTCAACGATCTCCAA---
-CTGCCTATATATACACGCCAAACCCATCCGTACTCCTCCATCTCT------TCCAGCCCCATCCAGCAAACCGCCGCAA
CCTTCTCCGACCAAGCAGCAGCTCCGAGTTCGA--TCGAGCCCAAGTTCGA-----------CGGCG-----ATGGCACG
GTCGGAGCTTGTCATGGCGTTGCTGGTGGCGGTCCTCGCCGCCGGCTGCTGCGCGTCGGCCGGCGCCGTGGCGTACCTCT
CCAAGCTGCCCGTGACCCTCGACGTCACCGCATCCCCCAGCCCCGGCCAAGGTACCACCGTCGT-ATGT-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---GCAATGCATTCTCGTTAAC----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------AGA---CATAGAGCGT
AAGCAAGCA--------------------------TCTTCTTTAACACTGACGACCA-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------AA------TCAAACGCGACCAGTTCTCCACGCCGGCGAGGACGTGATCACGGTGACGTGGGCT
CTGAACGCGACCCGGCCGGCCGGCGACGACGCCGCCTACAAGAGCGTCAAGGTCAGCCTCTGCTACGCGCCGG-------
-----CGAGCCAGAAGGAGCGCGAGTGGCGCAAGACCCACGACGACCTCAAGAAGGACAAGACCTGCCAGTTCAAGGTCG
CCCAGCAGCCCTACGCCGGCGCCG---GCGGCAGGGTCGAGTACCGCGTCGCCCTCGACATCCCCACCGCCGCCTACTAC
--------------------------------------------------------------------------------
-------------------------------GTGCGCGCCTACGCGCTCGACGCCTCCGGCACGCAGGTCGCATACGGCC
AGACCGCGCCCGCCGCAGCCTTCAACGTCGTCAGCATCACGGGCGTCACCACCTCCATCAAGGTTGCCGCCGGCGTCTTC
TCTACCTTCTCGGTCGTCTCCCTCGCCTTCTTCTTCTTTATTGAGAAACGCAAGAAGAATAACTAAACT-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-
>chr5D_1013
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----GAGCTGGTCATGGCATTGCTGGTGGTGGTCCTCGCCGCCGTCTGCTGCGCGTCGGCGGGCGCCGTGGCGTACCTCT
CCAAGCTGCCTGTGACCCTCGACGTCACCGCATCCCCCAGTCCCGGCCAAGGTACCACCATCGT-ATAT-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---GC-----TTTTCTGTTTTTTGATTCGAAAGATCTCGTATATGCATTGTTTTTGACCCAGATGAAAAAATATCTCGTG
GGGCACCGAGATTTCCGGTTACCGTGGTAACCGACAAATACTGAACGGTTATCAAACAAAAAAATTGATTTAATTTTGAA
TTCGAATAAAATTCATTCAAATTTCATTTAAATTCAAAAAATTGAGATATTTTGCTCGGCAAGGTGATTTCCATGGGTAA
CCGAATTTCGCGAGCTGTAACCAAAACCCTGTCTTCCACACGTCACGGATTGTATAGTACCACAATA---CATAGATCCA
AAACAAGCA--------------------------CCTTTTTTAATACTCATTTTTATAAGATGTTGTAGACATTTTAGA
CATTGTCCGACAAAGTTCAATCTCAGGTGCATGAAACGTTTTATAAAAAAGAATGAGAGTACTAATAACGACTTAAGACT
AGCCACAGTGAAAGTAACTTTAGCAGTAACATCGAATCCTACTCAGCAAATTTGCTTATGTGGCAATGAGTTAATGAGGA
GAGAGGTAGTGTGAGTAACTTAGCTAGTTGCCGTAACATCACATGTCCCAATGCAATATGAGTCTATAACCTAATAAATG
AAGCTTTACATGACACCACACTTATGTTACTACCCATTATGAAGCTAGTAATATAGTCTAGGGATATGTGTATGTTACTA
TGCATTATGGCTAGTCTAA-ATAGCTGATCCTTGACCAGTTCTTCACGCCGGCCAGGACGTAATCACAGTGACGTGGGCC
CTGAACGCGTCTGTGCCCGTCGGCGCGGACGCCGACTACAAGAACGTGAAGGTCAGCCTCTGCTACGCGCCGGTGAATGC
GCCGTTGAGCCAGAGGGAGCACGAGTCGCGCAAGACCCACGACAACCTCGACAAGGACAAGACCTGCGAGTACAAGGTCA
CCGAGCAGCCCTACACCGGCGCCGGCAGCAA---GGTCGAGTACCGCGTCGCCATCGACATCCCCACCGACACCTACTAC
--------------------------------------------------------------------------------
-------------------------------GTGCGCGCCTACGCGCTCGACGCCTCCGGCACGCAGGTCGCCTACGGCC
AGACACTGCGCACCGCTACCTTCAACATCGTCAGTATCAGAGGCATCAACACCTCCATCAAGGTCGCCTCCGGCGTTTTC
TCCACCTTCTCTGCCGTCTCCCTCGTCTTCTTCTTCTTCATT--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-
>chr6D_1017
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------TGGTCACGGCGCTGCTGCTGGTGGTCCTCGCCGCCGGCTGCTGCGCGTCGGCGGGCGCCGTGGCGTACCTCT
CCAAGCTGCCGGTGACCCTCGACGTCACCGCCTCCCCCAGTCCTGGCCAAGGTACGTCCGTCGT-ACACTCGTATATGCT
TCCTTGTTTGGCGCCGCATGTGAGAAACTGTTTCCGCTGTTTGCTATAGCAACGTCATAGGTTGGCATATATGGCCATGT
ATGCAACAAATTAATTAGCCTTGTCGTATGCCATTCCAAATATGCCAAGGTCAGCCGGC-TGCCGGCCAGTAGAAGAATC
TTCGAAATAGATGCTCAATTTT----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------ATT---AAGAGAACTT
ATGCAGGGAATTTTGTTTGCGCCTCTTCTTTTTCTTCATCG-TAACAAAAATGACCA-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------AC-TTAACTGATCCTTGACCAGTTCTTCACGCCGGCGAGGACGTGATCACGGTGACGTGGGCC
CTGAACGCGAGCCAGCCGGCCGGCAAGGACGCCGACTACAAGAACGTGAAGGTGAGCCTCTGCTACGCGCCGG-------
-----TGAGCCAGAAGGAGCGCGAGTGGCGCAAGACCCACGACGACCTCAAGAAGGACAAGACCTGCCAGTTCAAGGTCA
CCCAGCAGGCCTACCCCGGCACCG---GCAA---GGTCGAGTACCGCGTCGCCCTCGACATCCCCACCGCCACCTACTAC
--------------------------------------------------------------------------------
-------------------------------GTGCGCGCCTACGCGCTCGACGCCTCCGGCACGCAGGTCGCCTACGGCC
AGACCGCGCCCGCCTCCGCCTTCAATGTCGTCAGCATCACCGGCGTCACCACCTCCATCAAGGTTGCCGCCGGCGTCTTC
TCCGCCTTCTCCGTCGCATCCCTCGCCTTCTTCTTCTTCATTGAGAAACGCAAGAAGAACAACTA---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-
>chr6A_1017
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------TGGTCACGGCGCTGCTGCTGGTGGTCCTCGCCGCCGGCTGCTGCGCGTCGGCGGGCGCCGTGGCGTACCTCT
CCAAGCTGCCGGTGACACTTGACGTCACCGCCTCCCCCAGTCCCGGCCAAGGTACGTCCGTCGT-ACCATCGTATATGCT
TCCTTGTTTGGCTCCGCATGTGAGAAAATGTTTCCGCTGTTTGCTATAGCAACGTCATAGATTGGCATAT----CCATGT
ATGCAACAAGTTAATCGGCCTTGTCGCATGCCATTCCAAATATGCCAAGGTCAGCTGGCTTGCCGGCCAGTAGAAGAATC
TTCGAAGTAGATGCTCAATTTT----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------ATT---AAGAGAACTT
ATACAGGGAATTTTGTTTGCGCCTCTTCATTTCCTTCATCG-TAACAAAAGTGACTA-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------ACTTTAACTGATCCTTGACCAGTTCTTCACGCCGGCGAGGACGTGATCACGGTGACGTGGGCC
TTGGACGCGAGCCAGCCGGCCGGCAAGGACGCCGACTACAAGAACGTGAAGGTGAGCCTCTGCTACGCACCGG-------
-----TGAGCCAGAAGGAGCGTGAGTGGCGCAAGACCCACGACGACCTCAAGAAGGACAAGACCTGCCAGTTCAAGGTCA
CCCAGCAGGCCTACCCCGGCACCG---GCAA---GGTCGAGTACCGCGTCGCCCTCGACATCCCCACCGCCACCTACTAC
--------------------------------------------------------------------------------
-------------------------------GTGCGCGCCTACGCGCTCGACGCCTCCGGCACGCAGGTCGCCTACGGCC
AGACCGCGCCCGCCTCCGCCTTCAACGTCGTCAGCATCACCGGCGTCACCACCTCCATCAAGGTCGCCGCCGGCGTCTTC
TCCGCCTTCTCCGTCGCCTCCCTCGCCTTCTTCTTCTTCATTGAGAAACGCAAGAAGAACAACTAGACGTGGAGATCGCA
ACCGTGGCAATGT-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-
>chr6B_1017
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--------TGGTCACGGCGCTGTTGCTGGTGGTCCTCGCCGCCGGCTGCTGCGCGTCGGCGGGCGCCGTGGCGTACCTCT
CCAAGCTGCCGGTGACCCTCGACGTCACCGCCTCCCCCAGTCCCGGCCAAGGTACGTCCGTCGT-ACCGTCGTATATGCT
TCCTTGTTTGG-----------------------CGCTGTTTGCTATAGCAACGTCATAGATTGGCATATATGGCCATGT
ATGCAACAAGCTAATTAGCCTTGTCGCATGCCATTCCAAATATGCCAAGGTCAGCCGGCTTGCCGGCCAGTAGAAGAATC
TTCCAAGTAGATGCTCAATTTT----------------------------------------------------------
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----------------------------------------------------------------ATT-------------
---------ATTTTGTTTGCGCCTCTTCTTTTTCTTCATCC-TAACAAAAATGATCA-----------------------
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-----------------AC-TTAACTGATCCTTGACCAGTTCTTCACGCCGGCGAGGACGTGATCACGGTGACGTGGGCC
CTGAACGCGAGCCAGCCGGCCGGCAAGGACGCCGACTACAAGAACGTGAAGGTGAGCCTCTGCTACGCGCCGG-------
-----TGAGCCAGAAGGAGCGCGAGTGGCGCAAGACCCACGACGACCTCAAGAAGGACAAGACCTGCCAGTTCAAGGTCA
CCCAGCAGGCCTACCCCGGCACCG---GCAA---GGTCGAGTACCGCGTCGCCCTCGACATCCCCACCGCCACCTACTAC
--------------------------------------------------------------------------------
-------------------------------GTGCGCGCCTACGCGCTCGACGCCTCCGGCACCCAGGTCGCCTACGGCC
AGACCGCGCCCTCCTCCGCCTTCAACGTCGTCAGCATAACCGGCGTCACCACCTCCATCAAGGTCGCCGCCGGCGTCTTC
TCCGCCTTCTCCGTCGCCTCCCTCGCATTCTTCTTCTTCATTGAGAAACGCAAGAAGAACAACTA---------------
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>chr5B_1216
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------------------------------------------------TAACGACTA-----------------------
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-----------------AA-TTGGTTCATCCTTGACCAGTTCTTCATGCCAGCAAGGACGTGATCACGGTGACGTGGGCC
CTGAACGCGACTCGGTCAGCCGGCGTGGACGCCGACTACAGAAACGTGGAGGTCAGACTCTGCTACGCGCCGG-------
-----TGGGCCAGAACGAGCGTGAGTGGCGCAAGACCTCCGACAACCTCGAGAAGGACAAGACGTGCCTGTTCAAGGTTA
CCCAGCAGCCCTATCCCAGCGTCGGTAAG------GTTGAGTACCGCATCGCCGCCCACATCCCCACCGCCACCTACTCC
CTCCGTTCTGAATTACTTATCTTGGATCCGTATCTAGACTCATTTTAGTGCTAGATACATCTGTATCTAGACAAATCTAA
GACAAGTAATTCGAAACGGAAGGAATACTAGGTGCGCGCCTACGCGCTCGACGCCTCCGGCACGCAGGTCGCCTTCGGCC
AGACACTGCGCACCGCTACCTTCAACATCGTCGGTATCACAGGCATCAACACCTCCATCAAGGTCGCCGCCGGCGTTTTC
TCCACCTTCTCTGTCGCCTCCCTCGCCTTCTTCTTCTTCATT--------------------------------------
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>SNPs
SSSSSSSSSSSSSSS---------------------------SS-S-----SS-S------------------S------
---------SSS----------------------------------S-SS-S-SS-------------------------
--------------------------------------------------------------------------------
---------------------S----------------------------------------------S-----------
SS------------------------------------------------------------------------------
----------------------------------S----S----------------------------------------
--------------------------------S---S-------------------------------------------
-----------------------------------------------------------------------------S--
------------------------------------------------------S-------------------------
------------------------------------------------------S-S---SSS-SSSS------------
-------------------------------------S------------------------------------------
--------------------------------S--------------------------------S--------------
---------------------------S--------S-------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------S------S-----------------
----------------------------S---------------------------------------------------
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-------------------------------------------------------------------S------------
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---------------------S----------------------------------------------------------
-----------------------------------S--------------------------------------------
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-----------------------------------------------------------------------------S--
--------S-----------------S------------------------------------S-SSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------
------------------------SS--------------------S---------------------------------
----------------------------------------------------------------S----S----------
-----S------------------------------------------SSSSSSSSSSSSSS------------------
--------------------S-------------------S-------------------------S----S----S---
----------S-------S-------SSSSSSSSSSSSSS---------S--------SS------------SSSSSSS-
SSS------------------------------------------------------S----------------------
--------------S--SS----------------SS--S----------S------------------SS---------
-S-S-------------------S---S----------------------------------------------------
----S--------------------------------------------------------------------S------
---------------------------S-------------------S-----------------------------SSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
S
>forward_781
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-----------------------------------------TCTTCCGGACCCTCTAGAGC-------------------
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>reverse_3395
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----------------------------------TTAACAGAGACCCGCAAGGC--------------------------
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-
