>input_sequence_71270
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------ATGCAAGCGAAACGGTCGCTGTACT
GGAAGCTAATGGGTGGGAGGCACATGCTGGCGCTCAACACCGCGACGATGGAGCTCACCGTGCTGGCGCTCCCGCCTTTC
TTGCGGGAGCAGAGTTTCGACGTCATTGAGAAGGGGGAGGATGGCACCGGTAAGCTCTGTGTGCTCACTATGCGTGGATT
ATGCATTGAGGTTTGGAACGGTGAGGATGACGGCGCCGGTGGGCTGACATGGACACTGTTGGAAAAGTCGGTGAGATTCT
ATGGGGCGATGGAACCGATGATTCTTTCGGATCCTTTGGACCAGACTCCACAGGGCGAGGTCATCGGGGTGGCTGCTGGT
GTGGTGTTCTTGCGCAGCGGCAGTTGTCTGCTCTCCATTCATCTTGAGACCATGAAGATGACGAGGCTGTCTCTGGACGT
GAATTGCCCGTCTCCGCTGATATATCCTTACACGATAGCATGGCCGCCAGCGTTCTTGAACCCTACTGAACAAGGTGCTT
GATAAGGTGATACAC-----AGTTACAATATGCTGAATGTGTCCTGCAAGTTTTGATCAACA---ATGTGCTTAACTGCT
TATACAGACATGTTTAAACCAAACAGTTCAGTTAACCTTCTGCCATTCAAAATTTTCTTTTTGTTTGCTTCTTGGGTGAA
TTCTTCTGATATGTCTGAATGCCCTGAATTTTCTGCAGGAATGTGA----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------
>chr1A_1_TraesCS1A01G100000
ACTACTTCCTCCGTCTCAAAATATAAGAACATTTTTTACACTAGTATAATATCAAAAACGTTCTTATATTATGGACGGAG
GGAGTAGTTTTTAGGGCCGGGAAATAATTAAAAAAATGACTGTATGGAAATAGTTAATTAGTTGGCCTGTGTAGCCCTGT
GATGCATCATGTTTTATTTTTTTGAGGAAACTGTGATGCATCAGATGAACGGCTGGGCTGTTAAGATGGATTTTTGGCCA
GGAGTGAGGCCCTTCTGGCCCATATCAATGCACAGGCTGGGCGTATGAGAAGGCACGGCACTCTGCCGTGCCCAGCGGCA
CGGTAGAGGAGCCGGTTCCCCTGCGCCACATGGCTC---CG---GCGGCCGCCACCATCGCCGTACTCGGCGACGACATC
CTACAGGAGGTCTTCATCCTCCTCCCAACCCCCGCCGACCTCCTCCGCGCGGCCCTCGCCTGCCAGCCTTTCCTCCGGGT
CGCCCGCAGCGAAGCCTTCCTCCGCCGCTTCCGCCACCGCCACCCCTCAACCTGCCCGGTCATCCTCGGATGCCTCCTCT
ACCGCCCCGGCAAGCGCCGCGGGGCCAGCGCCCCTTACCTTCTGCCCGCCGACCTCCTCCGCGCCACGCACCGCACCATC
AAGGGAGGAGACTTCGCCCTCTCCTTCCTCCCCCGCCGCGGCCGGCCGGAT------GGCCCCGGCACCCCGTGGCGGCT
CCTGGACTGCCGCAACGGCAGCCTCCTGTTGCGTAACGGGGCTTCCGGAGATCTCGCGGTCGCCGACCCGTTGACCCGGC
GCTGGGTCTCGCTCCCCGCGCTCCCCGGTGGGCGCCGCGTAGGGTACGCCCTCGTCGCCGACGACGGCGACTCTTCGGCC
CTCAAGGCGGTATGCATTTCCCGACGCGCTGGAA---CCACAGAGCTGCGCGCCTTTCTCCTCTCCTCCGCTGAGCTCCG
GTGAGACGACGTGGGTGGCCTCGCGCAGCAGCCCAATCTCGCTGGATCCCGCGCGATGCAAGCGAAACGGTCGCTGTACT
GGAAGCTAATGGGTGGGAGGCACATGCTGGCGCTCAACACCGCGACGATGGAGCTCACCGTGCTGGCGCTCCCGCCTTTC
TTGCGGGAGCAGAGTTTCGACGTCATTGAGAAGGGGGAGGATGGCACCGGTAAGCTCTGTGTGCTCACTATGCGTGGATT
ATGCATTGAGGTTTGGAACGGTGAGGATGACGGCGCCGGTGGGCTGACATGGACACTGTTGGAAAAGTCGGTGAGATTCT
ATGGGGCGATGGAACCGATGATTCTTTCGGATCCTTTGGACCAGACTCCACAGGGCGAGGTCATCGGGGTGGCTGCTGGT
GTGGTGTTCTTGCGCAGCGGCAGTTGTCTGCTCTCCATTCATCTTGAGACCATGAAGATGACGAGGCTGTCTCTGGACGT
GAATTGCCCGTCTCCGCTGATATATCCTTACACGATAGCATGGCCGCCAGCGTTCTTGAACCCTACTGAACAAGGTGCTT
GATAAGGTGATACAC-----AGTTACAATATGCTGAATGTGTCCTGCAAGTTTTGATCAACA---ATGTGCTTAACTGCT
TATACAGACATGTTTAAACCAAACAGTTCAGTTAACCTTCTGCCATTCAAAATTTTCTTTTTGTTTGCTTCTTGGGTGAA
TTCTTCTGATATGTCTGAATGCCCTGAATTTTCTGCAGGAATGTGAAGCTACATTTCAGCTTATGATGATTA-----TGT
GGCAGAGCTGTTATTGG-AAAAGGATGTCATTTGATCATCCATATGAATTCTTGAGACATGATAGCCGCGAACCTGCTCT
AGTTGTCCTTATATGTTTTAGCCTCGTATCATGTAATTAGTTGTGCTTGCAGTCTTAGTTGGTGTGTTGTGTTCTGCCAC
CATTATGTGTATGGTCACTCTATTGCCTGAGGTTATAATTTCGGAATATAGTATTTAGCATGCTTTTGTGACTGTTTCGC
CAGAGCTTTTATA-TTGCTTGTATGATTAT--GATATATAGTGTGAATTTCTGTATCAGTTCATCCGGCTGCTCAATTTT
GGTGCTTAACTTGAGGTTGTCGGGATACAATTCTGGCTGGGGTTAGGAGTCTGGCTCCTCTGGTACAGATGCGCGAATGC
TGGATAGTC-T-ACTTTTCTTCCGATGGCATGCTCAATGAAGAAACTGAAGACTGAAGAACTTGGCCTAATGTCACCAAG
TGTTGTTATTACGGTGAAGTTTGATAAATTGTTTTATCTTTTGGTGTTGGTGTGTTTTTATTTATTTTTCACTTCTCTGA
GGTGCGCCATGGATGGAGATAGCAGCATGACGGTCCAGGTTCATTTCTTCGGTTAATCTTAGTTGAAGGTTTTGCAGGCA
AAAACGCATTGAGATTTCTGAGATAGGCTATG------------CTT-GTCTTTCTATCATGTTCGAATATATTGGGTGA
A--CAGTTCTGGTTCAGGTTTTTAGTTTGGTTTATCTGATGCAAA--------TGCCAGTCTTACTGTGCATCCAAATTC
CAAGGTCATGCCACAGGGAAGAAGCTGAAGCTCTTGCTGAAGTCTGGGTTGGAGGTTTTGTGGATAAATACACTGATTTC
GCTATCCTTATTTGTGTACGCATCCGCTGAAATGATGGCTGTGCACATCTGATGCTCATCAAGGCGCAATATTTGTTAAA
ATTTCTGCTGATTTTCCGATGACAGGTGCCATTTCTCCCT
>chr1D_340
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------CCTGCGCCACATGGCTC---CG---GCGGCCGCCACCATCGCCGTCCTCGGCGACGACATC
CTACAGGAGGTCTTCATCCTCCTCCCGACCCCCGCCGACCTCCTCCGCGCGGCGCTCGCCTGTCAGCCTTTCCTCCGGGT
CGCCCGCAGCGCAGCCTTCCTCCGCCGCTTCCGCCGCCGCCACCCCTCGACCTGCCCGGTCATCCTCGGATGCCTCCTCT
ACCGCCCCAGCAAGCGCCGCGGGGCCAGCGCCCCTTACCTTCTGCCCGCCGACCTCCTCCGCGCCACGCACCGCACCATC
GAGGGAGGAGACTTCGCCCTCTCCTTCCTCCCCCGCCGCGGCCGGCCGGAT------GGCGCCGGCATCCCGTGTCGGCT
CCTGGACTGCCGCAACGGCAGCCTCCTGTTGCGTGACGGGGCTTCCGGAGAACTCGCCGTCGCCGACCCGTTAACCCGGC
GCTGGGTTTCACTCCCCGCGCTCCCCGGTGGGCGCCGCGTAGGGTACGCCCTCGTCCCCGACGACGGCGACTCTTCGGCC
TTCAAGGCGGTATGCATTTCCCGACGTGCTGGAA---CCACAGAGCTGCGCGCCTTTCTCCTCTCCTCCGCTGAGCTCCG
GTGGGACGACTTGGGTGGCCTCGCGCAGCAGCCCAATCTCGCTGGATCCCGCGCGATGCAAGCCAAACGGTCGCTGTACT
GGAAGCTAATGGGTGGGCGGCACATGGTGGCGCTCAACACCGCGACGATGGAGCTCACCGTGCTGGCGCTCCCGCCTTTC
TTGCGGGAGCAGAGCTTCGACGTCATTGAGAAGGGGGAGGATGGCGCCGGTAAGCTCTGGGTGCTCACTATGCGTGGATT
TTGCATCGAGGTTTGGGTCGGCGAGGACGACGGCGCCGGTGGGCTGACATGGACGCTGTTGGAAAAGTCGGTGAGATTCC
GCACGGCGATGCAAGCGATGATTGGTTCGGATCCTTTTCACCATACTCCACAGGGCGATGTCATCGGGGTAGCTGCTGGT
GTTGTGTTCTTGCGCAGCTGCAGTTGTTTGTTCTCCATTCATCTTGAGACCATGAAGATGACGAGGCTGTCTATGGTCGA
GGATTGCCCGTCTCCGCTGATATATCCTTACACGATAGCATGGCCGCTGGCGTTCTTGAACCCTACTGAACAAGGTGCTT
GATAAGGTGATACAC-----AGTTACAATATGCTGAATGTGTCCTGCAAGTTTTGATCAACA---ATGTGCTTAACTGCT
TATACAGACATGTTTAAACCAAACAGTTCAGTTAACCTACAGCCATTCAAAATTTTCTTTTTGTTCGCTTCTTGGGTGAA
TTCTTCTGATATGTCTGAATGCCCTGAATTTTCTGCAGGAATGTGAAGCTACATTTCAGCTTATGATGATTAGATTGTGT
GGCAGAGCTGTTATTGG--AAAGGATGTCATTTGATCATCCATATGAATTCTTGAGACATGATAGCCGCGAACCTGCTCT
AGTTGTGGTTATATGTTCTAGCCCCGTATCATGTAATTAGTTGTGCTTGCAGTCTTAGTTGGTGTGTTATGTTCTGCCAC
CATTATGTGTATGGTCACTCTATTGCCTGAGATTATAATTTCGGAATATAGTATTTAGCATGCTTTTGTGACTGTTATGC
CGGAGCTTTTATA-TTGCTTGTATGATTAT--CATATATAGTGTTAATTTCTGTATCAGTTCATCCGGCTGCTCAATTTT
GGTGCTTAACTTAAGGTTGTCAGGATACAATTCTGGCTGGGGTTAGGAGTCTGGCTCCTCTGGTACTGATGTGCGAATGC
TGGATAGTC-T-ACTTTTCTTCCGATGGCATGCTCAATGAAGAAACTTAAGACTGAAGAATTTGGCCTAATGTCACCAAA
TGTTGTTATTACAGTGAAGTTTGATAA-TTGTTTTATCTTTTGGTGTTAGTGTGTTTTTATTTATTTTTCACTTCTCTGA
GGTCCGCCATGGATGGAGATAGCAGCATCATGGTCCAGGTTTATTTCTTCAGTTAATCTTGGTTGAAGGTTTTGTAGGCA
AAAACACAATGAGATTTCTGAGATAGGTTATG------------CTTGGTCTTTCTATCATGTTCGAATATATTGGGCGA
A--CAGTTCTGGTTCAGGTTTTGAGTGTGGTTTATCTGATGCAAA--------TGCCAGTCTTACTGTGCATCCAAATTC
CAAGGTCATG-CACAGGGAAGAAGCTGAAGCTCTTGCTGAAG--------------------------------------
--------------------------------------------------------------------------------
----------------------------------------
>chr1B_340
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------CCTGCGCCACATGGCTC---CG---CCGGCCGCCACCATCGCCGTCCTCGGCGACGACATC
CTGCAGGAGGTCTTCATCCTCCTCCCAACCCCCGCCGACCTCCTCCGCGCCGCGCTCGCCTGCCAGCCTTTCCTCCGGGT
CGCACGCAGCGCAGCTTTCCTCCGCCGCTTCCGCCGCCGCCACCCCTCAACCTGCCCGGTCGTCCTCGGATGCCTCCTCT
ACCGCCCCAGCAAGCGCCGCGGGGCCAGCGCCCCTTACCTTCTGCCCGCCGACCTCCTCGGCGCCACGCGCCGCACTATC
GAGGGAGGTGACTTCGCCCTCTCCTTCCTCCCCCGCCGCGGCCGGCCGGAT------GGCCCCGGCACCCCGTGGCGGAT
CCTGGACTGCCGCAACGGCAGCCTCCTGTTACGTGACGGGGCTTCCGGAGAGCTCGCCGTCGCCGACCCGTTAACCCGGC
GCTGGGTTTCACTCCCCGCGCTCCCCGGTGGGCGCCGCGTAGGGTACGCCCTCGTCCCCGACGACGGCGACTCTTCGGCC
TTCAAGGCGGTATGCATTTCCCGACGCGCTGGAA---CCACAGAGCTGCGCGCCTTTCTCCTCTCCTCCGCTGAGCTCCG
GTGGGCCGACGTGGGTACCCTCGCGCAGCAGCCCAATCTCGCTGGATCCCGCGCGATGCAAGCGAAACGGTCGCTGTACT
GGAAGCTAATGGGTGGGGGGCACATGGTGGCGCTCAACACCGCGACGATGGAGCTCACCGTGCTGGCGCTCCCGCCTTTC
TTGCGGGAGCAAACTTTCGACGTCATTGAGAAGGGGGAGGACGGCGCCGGTAAGCTCTGTGTGCTCACAATGCGTGGATT
ATGCATTGAGGTTTGGATCGGTGAGGACGACGGCGCCGGTGGGCTGACATGGACGCTGTTGGAGAAGTCGGTGAGATTCT
ACGGGGCGATGGAAGCGATGATTCTTTCGGATCCTTTGGACCAGACTCCACAGGGCGATGTCATCGGGGTGGCTGCTGGT
GTGGTGTTCTTGCGCAGCAGCAGTTGTCTGCTCTCCATTCATCTTGAGACCATGAAGATGACGAGGCTGTCCCTGGACGT
GAATTGCCCGTCTCCGCTGATATATCCTTACACGATAGGGTGGCCGCCAGCGATCTTGAACCCTACTGAACAAGGTGCTT
GATAAGGTGTGTCTCCTGTAAGCTACAATATGCTAAATGTCTCCTGTAAATTTTGATCAA---TGATGTGCTGAACTGC-
--------------------------------------------------------------------------------
-----------------------------------CAGGAATGCAGCACTACATTTCAGCTTATGATGACTAGATTGTGT
GGCAGAGCTGATATCGG-AAAAGGATGTCATTTGCTCATCCATATGAATTCCTGAGACATGATAGCCGCGAACCTGCTCT
AGTTGTGCTTATATGTTTTAGCCTCGTATCATGTAATTATTCGTGCTTGCAGTCTTAGTTGGTGTGTTAAATTCTGCCAC
CATTATCTGTATGGTCACTCTATTGCTCGAGGAATATAGG---------AGTATTTAGCATGCTTTTGTGAATGTTATGC
TGGAGCTTTTATA-TTGCTTGTATGATCATATTATGTATCGTGTCAATTTCAGTATCAGTTCATCCGAATCCTCAATTTA
GGTGCTTAACTTAAGGTTGTCGTGGTACATTTCTGTCTGGGGTTTGGAGTCTGGCTCCTCTGATACTGATGCGCGAATGC
TGGATAGTC-T-ACTTTTCTTCCGATGGCATGCTCAATGAAGAAACTGAAGGCTGAAGAACTTGGCCTAATGTCACCAAA
TGTTGTTATTGCAGTGAAGTTTGATAA-TTGTTTTATCTTTTGGTGTTAGTGTGTTTTTATTTATTTTTCACTTCTCTGG
GGTGTGCCATGGATGGAGATAGCAGCATCACTGTCCAGGTTTATTTCTTCAGTTAATCTTAGTTGAAGGTTTTGTAGGCA
AAAATACAATGAGATTTCTGAGATAGGTTATG------------CTT-GTCTTTCTATCATGTTCGAATATATTGGGCGG
A--CAGTTCTGGTTCAGGTTTTGAGTGTGGTTTATCTGATGCAAA--------TGCCAGTCTAACAGCGCATCCAAATTC
CAAGGTCATG-CACAGGGACGAAGCTGAAGCTCTTGCTGAAG--------------------------------------
--------------------------------------------------------------------------------
----------------------------------------
>chr1A_343
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------GCGCCACATGGCTC---CGCCTGCCGCCTCCACCGTCGACGTCCTCGGCGACGACCTG
CTGCAGGAGGTCTTCGTCCTGCTCCCGGGCCCCGCCGACCTCCTCCGCGCCGCGCTCGCCTGCCGGCCCTTCCTCTGCGC
CGCCCGCAGCGCCGCCTTCCTCCGCCGCTTCCGCCGCCGCCACCCCTTCACCTGCCCACTCCTCCTCGGCTGCCACCTCC
ACCGCCCCGGCGAGCACCGCGGGAACAGCGCCCCGCGCCTGCTCCCCGCGCCCCCCGCCGCCGCCACGCGCCGCGTCGCC
GAGCGCGGCGACTTCGCGCTCTCCTTCATCCCCCGCCGCGGCCGGCCGGGCGCCGCCGGCGCCGGCACCCCCTGGCAGCT
CCTCGACTGCCGCAACGGCCGCCTCCTTCTGCGCAGCCGGTCGTCCCAGGACCTCGCCGTCGCCGACCCGTTGGCCCGGC
GCTGGGTCTCGCTCCCCGCGCTCCCCGGCGACCACCCCGTGGGGTACGCCCTCGTCACCGACGACGGCGACTATTCGGTG
TTCAAGGCGGCCTGCATTTCCCGAGTCGGCGACA---CCACGGACCTGCGCGCCTTCCTCCTCTCCTCCGCCGACCTCCG
GTGGGCGGACGTGGGCGGCCTCGCGCAGCAGCCCAATCTCGCGGCCTCCCGGGCGATGCAGGCCAACGGGTCGCTGTACT
GGAAGCTAGTGGGTGGACAGCACGTGCTGGCGCTCAACACGGCGACGACAGAGCTCGCCGTGCTGCCGCTCCCGCCTTTC
CTGCGGGAGCTCAGTTTCGACGTCATCGAGAAGGGGGAGGACGGCGCCGGCGGGCTCCATGTGCTCACCATGCGTGGCTT
CTGCATCGAGGTTTGGGTCAGCGAGGACGACGGTGCCGGTGGCCTGGCGTGGACGCTGGTGGACAAGTCGGTGAGGTTCC
ACAGGGCGATTGCAGAGATGATTGGCTCGGAACACTTTTACCATCTCACACTG---GATGTCATCGGGGTGGCTGCCGGT
GTTGTGTTCTTGCGCAATGGCAGTTGTCTGTTCTGCATTCATCTTGAGACTATGAAGATGACCAAGCTCTCTGAGAATGA
GAGTTGCCCGTCTGCGCTGATATATCCTTACACGATAGCGTGGCCGCCAGCGTTCTTGAACTCTATTGAAGAAGGTGCTT
GATAAGGTGATACAC-----AGTTACAATATGCTAAATGTCTCCTATAAGTTTTGATCAACGATGATGTGCTTAACTGGT
TATAAAGAAATGTTTAAACCAAACAGTTTAATTAACCTTCTGCCATCTAAAACTTTC--TTTGTTTGCTTCTTGGGTGAA
TTCTTCTGATATGTCTCAATGCCCTGGATTTTCTGCAGGAATGCGAAGCTACATT-CAGCTTATGGTGATTAGATTCTGT
GGCAGAGCTGATGTTGGAAAAAGGATGTCATTTGATCATCCATATGAATTCGTGAGACATGATAGCCGCAAACTTGCTCT
AGTTGTGCTTACA-GTTTTAGCTTCATATCATGTAATTAGTTGTGCTTGCAGTCTTAGTTGGTGTGTTATGTTCTGCCAC
CATTATGTGTATGGTCACTCTATTGCCTGAGATTATAATTTCGGAATATAGTATTTAGCATGCTTTTGTGAATGTTATAC
CGGAGCTTTTATGTTTGCTTCTATGATCAT--TATATATCGTGTCAAT--------------------------------
------------------------------TTCTGGCTGGGGTTTGGAGTCTGGCTCCTCTGATACTGATGCGCGAATGC
TGGATAGTC-TTACTTTTTTTCCAATCCCATGCTCAATGAAGAAACTGAAGACTGAAGAACTTGGCCTATTGTCATCAAA
TGTTGTTATTATGGTGAAGTTTGATAA-TTGTTCTGTCGTTTGGTGTTGGTGCGTTTTTATTTATTTTTCGCTTCTCTAG
GTTGCGCCATGGATGGAGACAGCAGTATCATGTTCCAGGTTTATTTATTCACTTAATCTGGATTGAAGGTTTTGTAGGTA
AATATGCAATGAGATTTCTCAGTTACGTTATAGAGTACTCCGTACTT-GTCTTTCTACCATGTTTGCATATATTGGGCGA
CTTCAGTTCTGGTTCAGATTTTGAGTGTGGTTGATCTGATGCAAATGCCTGTTTGACAGTCTTACTGTGCATCCAAATTC
CAGGGTCATT-CACAGGGAAGAAGCTGAAG--------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------
>chr1D_344
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------CGCCACATGGCCCTGGCC---GCCGCCTCCCCCGTCGACGTCCTCGGCGACGACCTG
CTGCAGGAGGTCTTCGTCCTGCTCCCGGGCCCCGCCGACCTCCTCCGCGCCGCGCTCGCCTGCCGGCCCTTCCTCCGCGC
CGCCCGCAGCGCCGCCTTCCTCCGCCGCTTCCGCCGCCGCCACCCCTTCACCTGCCCGCTCCTCCTCGGCTGCCACCTCG
GCCCCCC---------------------------TCTCCTGCTCCCCGCTCCTCCCATCGCCGCCACGCGCCGCGTCGCC
GAGCGCGGCGACTTCGCCCTCTCCTTCATCCCCCGCCGCGGCCGGCCGGGCGCCGCCGGCGCCAGCACCCCGTGGCAGCT
CCTCGACTGCCGCAACGGCCGCCTCCTGCTGCGCAGCAGGTCGTCCCAGGAGCTCGTCGTCGCCGACCCGCTGGCCCGGC
GCTGGGTCTCGCTCCCCGCGCTCCCCGGCGACCACCCCGTGGGCTACGGCCTCGTCGCCGACGACGGCGACTACTCGGTG
TTCCAGGCCGCCTGCATTTCCCGAGTCGGCGACA---CCACCGAGTTGCGCGCCTTCCTCCTCTCCTCCGCCGAGCTCCG
GTGGGCGGACGTGGGCGGCCTCGCGCAGCAGCCCAATCTCGCGGCCTCCCGGGCGATGCAAGCCAACCAGTCGCTGTACT
GGACGCTAGTGGGTGGACAGCACATGCTGGCGCTCAACACGGCGACGACGGAGCTCGTCGTGCTGCCGCTCCCGCCTTTC
CTGCGGGAGCTCGGTTTCGACGTCATCGAGAAGGGGGAGGACGTCGCCGGCGGGCTCCATGTGCTCACCATGCGTGGCTT
CTGCATCGAGGTTTGGGTCGGCGAGGACGACGGCGCCGGTGGCCTGGCGTGGACGCTGCTGGACAAGTCGGTGAGGTTCC
ACAGGGCGATTGCAGAGATGATTGGCTCGGAACACTTTTACCATCTCACACTG---GATGTCATCGGGGTGGCTGCCGGT
GTTGTGTTCTTGCGCAATGGCAGTTGTCTGTTCTGCATTCATCTTGAGACTATGAAGATGACGAAGCTCTCTGAGAACGA
GAGTTGCCCGTCTGCGCTGATATATCCTTACACGATAGCGTGGCCGCCAGTGTTCTTGAACCCTACTGAAGAAGGTGCTT
GATAAGGTGATACAC-----AGTTACAATATGCTAAATGTCTCCTGTAAGTTTTGATCAACGATGATGTGCTTAACTGCT
TATAAAGAAATGTTTAAACCAAACAGTTTAATTAACCTTCTGCCATCCAAAACTTTC--TTTGTTTGCTTCGTGGGTGAA
TTCTTCTGATATGTCTCAATGCCCTGAATTTTCTGCAGGAATGTGAAGCTACATT-CAGCTTATGGTGATTAGATTCTGT
GGCAGAGCTGATGTTGGAAAAAGGATGTCATTTGATCATCCATATGAATTCTTGAGACATGATAGCCGCAAACTTGCTCT
AGTTGTGCTTACA-GTTTTAGCTTCATATCATGTAATTAGTTGTGCTTGCAGTCTTAGTTGGTGTGTTATGTTCTGCCAC
CATTATGTGTATGGTCACTCTATTGCCTGAGATTATAATTTCGGAATATAGTATTTAGCATGCTTTTGTGAATGTTATGC
CGGAGCTTTTATG-TTGCTTGTATGATCAT--TATATATCGTGTCAAT--------------------------------
------------------------------TTCTGGCTGGGGTTTGGAGTCTGGCTCCTCTGATACTGATGCGCGAATGC
TGGATAGTCTT-ACTTTTCTTCCGATC-CATGCTCAATGAAGAAACTGAAGACTGAAGAACTTGGCCTAATGTCATCAAA
TGTTGTTATTATGGTGAAGTTTGATAA-TTGTTCTGTCGTTTGGTGTTGGTGCGTTTTTATTTATTTTTCGCTTCTCTGA
GTTGCGCCATGGATGGAGACAGCAGTACCATGTTCCAGGTTTATTTATTCACTTAATCTGGGTTGAAGGTTTTGTAGGTA
AAAATGCAATGAGATTTCTGAGTTACGTTATAGAGTACT----ACTT-GTCTTTCTACCATGTTTGCATATATTGGGCGA
CTTCAGTTCTGGTTCAGATTTTGAGTGTGGTTGATCTGATGCAAATGCCTGTTTGGCAGCCTTACTATGCATCCAAACTA
CAGGGTCATT-CACAGGGAAAAAGCTGAAGCTGAAGCTGAAG--------------------------------------
--------------------------------------------------------------------------------
----------------------------------------
>chr1B_344
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------CGCCACATGGCCC---CG---GCCGCCTCCACCGTCGACGTCCTCGGCGACGACCTG
CTGCAGGAGGTCTTCGTCCTGCTCCCGGGCCCCGCCGACCTCCTCCGCGCCGCGCTCGCCTGCCGCCCCTTCCTCCGCGC
CGCCCGCAGCGCCGCCTTCCTCCGCCGCTTCCGCCGCCGCCACCCCTTCACCTGCCCGCTCCTCCTCGGCTGCCACCTCC
ACCTCCCCGGCGAGCGCCGCGGGAACAGCGCCCCTCACCTGCTTCCCGCTCCCCCCTCCGCCGCCACGCGCCGGGTCGCC
GAGCGCGGCGACTTCGCCCTCTCCTTCATCCCCCGCCGCGGCCGGCCGGGCGCCGCCGGCGCCGGCACCCCGTGGCAGCT
CCTCGACTGCCGCAACGGTCGCCTCCTTCTGCGCAGCCGCTCGTCCCAGGAGCTCGCCGTCGCCGACCCGCTGGCCCGGC
GGTGGGTCTCGCTCCCCGCGCTCCCCGGCGATCACCCCGTGGGGTATGCCCTCGTCCCCGACGACGGCGACTATTCGGTG
TTCCAGGCGGCCTGCATTTCCCGAGTCGGCGACA---CCACGGAGCTGCGCGCCTTCCTCCTCTCCTCCGCCGAGCTTCG
GTGGGCGGACGTGGGCGGCCTCGCGCAGCAGCCCAATCTCGCGGCCTCCCGGGCGATGCAAGCGAACCGGTCGCTGTACT
GGAAGCTAGTGGGTGGACAGCACATGCTGGCGCTCAACACGGCGACGACGGAGCTCGCCGTGCTGCCGCTCCCGCCTTTC
CTGCGGGAGCTCAGTTTCGACGTCATCGAGAAGGGGGAGGACGGCGCCGGTGGGCTCCATGTGCTCACCATGCGTGGCTT
CTGCATCGAGGTTTGGGTCGGCGAGGACGACGGCGCCGGTGGCCTGGCGTGGACGCTGGTGGACAAGTCGGTGAGGTTCC
ACAGGGCGATTGCAGAGATGATTGGCTCGGAACACTTTTACCATCTCACACTG---GATGTCATCGGGGTGGCTGCGGGT
GTTGTGTTCTTGCGCAATGGCAGTTGTCTGTTCTGCATTCATCTTGAGACTATGAAGATGACGAAGCTCTCTGAGAACGA
GAGTTGCCCGTCTGCACTGATATATCCTTACACGATAGCGTGGCCGCCAGCGATCTTGAACCCTACTGAAGAAGGTGCTT
GATAAGGTGATACAC-----AGTTACAATATGCTAAATATCTCCTGTAAGTTTTGATCAACGATGGTGTGCTTAACTGGT
TATAAAGAAATGTTTAAACCAAACAGTTTAATTAACCTTCCGCCATTCAAAACTTTC--TTTGTTTGCTTCTTGGGTGAA
TTCTTCTGATATGTCTCAATGCCCTGAATTTTCTGCAGGAATGTGAAGCTACATT-CAGCTTATGGTGATTAGATTCTGT
GGCAGAGCTGATGTTGGAAAAAGGATGTCATTTGATCATCCATATGAATTCTTGAGACATGATAGCCGCAAACTTGCTCT
AGTCGTGTTTACA-GTTTTAGCTTGATATCATGTAATTAGTTGTGCTTGCAGTCTTAGTTGGTGTGTTATGTTCTGCCAG
CATTATGTGTATGGTCACTCTATTGCCTGAGATTATAATTTCGGAATATAGTATTTAGCATGCTTTTGTGAATGTTATAC
CGGAGCTTTTATGTTTGCTTGTATGATCAT--TATATATCGTGTCAAT--------------------------------
------------------------------TTCTGGCTGGGGTTTGGAGTCTGGCTCCTCTGATACTGATGCGCGAATGC
TGGATAGTC-TTACTTTTCTTCCAATCCCATGCTCAATGAAGAAACTGAAGACTGAAGAACTTGGCCTATTGTCATCAAA
TGTTGTTATTATGGTGAAGTTTGATAA-TTGTTCTGTCGTTTGGTGTTGGTGCGTTTTTATTTATTTTTCGCTTCTCTGA
GTTGCGCCATGGATGGAGACAGCAGTATCATGTTCCAGGTTTATTTATTCACTTAATCTGGATTGAAGGTTTTGTAGGTA
AAAATGCAATGAGATTTCTGAGTTACGTTAT-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------
>chr1B_698
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------CCGTGGAAGGT
CTTGGACTGCCGCAACGGCCGCCTACTGCTGCGCAATCGGGTGTCCCGAGAGCTGGCCGTCGCCGATCCCCTGACCAGGC
GCTGGGTCTCTCTCCCCGCGCCCCTGGCCGAGCGCCCCGTGGGGTACGGCCTCGTCACCGACGACGGTTGCTCGTCGGCG
TTCCAGGCGTTCTGCGTTTCAGAAGACGGCGGCGGCTCCTCCGGGCTCCGCGCCCAGGTGCTCTCCTCCAGCGAGCTCCG
CTGGGCCGACGCTGCTGTCCTCGCGGGCCAGCATACTCTCGCGGACTCTCGGGTGATGCAAGCGAACGGGTCGCTCTACT
GGAAGCTCAAGGGCGGGGAGCGCATGGTCGCACTCAACACGGCGACGATGGCGTTCTCCTTGCTGGAGCTCCCTGATTTC
GCGCGGCAGTTCAGCTTCGACGTCATTGAGAAGGGGGACGACGATGCTGGCGGGCTCTACCTACTCACTATGCTCGGATT
CTGCGTCGAGGTTTGGGGCGGCTGGGATGATGGCAGCGGTGTGCTAACATGGACACTGGTGGAGAAGTCGGTCAGGTTCC
AGAGGGCCATGGCGGAGATGATTCGTTCATCACAGTTTTTCCGGCATGGACTAGT---TGTCATTGGGGTGGTTGCCGGT
GTGGTCTTCTTGCGCAATAAGGATCGCCTGCTCTCCATTGATCTGGAAACAATGAAGCTCAGGCTGTTGGCTCGGAAAGA
CAAGTGCCCATCGACCCTGATGTATCCTTACACGATGGCATGGCCACCTTCATGCCTGAACCCTACTGAACAAGGTGCTT
GATAAGATGGTA--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSS---------------------------------------------S---------------
-----------------------------------------------------S--------------------------
-----------S-----------------------S--------------------------------------------
--------------------------------------------------------------------------------
S-------------------------------------------------------------------------------
---------------------------------------------------S-----S----------------------
--------------------------------------------------------------------------------
S-------------------------------------------------------------------------------
---S----------------------------------------------------------------------------
-----------------S--------------------------------------------------------------
---------------------------------------------S----------------------------------
-----------------S--------------------------------------------------------------
-S------------S-------------------------------------------S---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------S-------------------------------------------------------------S-----------
----------------------------------------------------------------------------SS--
-S------------------------------S-----------S-----------------------------------
------------S-----------------------------------------------------S-------------
-------------------------------------------------------------------------------S
---------------------------S----------------------------------------------------
----------------------------S------------S--------S-----------------------S-----
--------S------------------S-------------------------------------------------S--
----------------------S---S-----------------------------------------------------
----------S-------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_166
--------------------------------------------------------------------------------
------------------------------------------------------------------CTGTGTAGCCCTGT
GATGCA--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------
>reverse_2147
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------AGATGCGCGAATGC
TGGATA--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------
