>input_sequence_71222
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------------------------------------------CTATAAATTCTTCCTGGTACCGAGCGACAGAAACCC-A
AGAAAGTCTGAAC-AAATCACCGATCAAA-GAACGATCCCTCCCAAATCAATTGCTCACCCTTCCGCTTCC-AACAAATC
A------GTCGATTCCTTCCACCAGCAGCTTGAATCCCC---------A---------CCGACAATGTTGCTGATCCGCC
GCAGCAACGTGTTCGACCCCTTCTCCCTCGACTTCTTCGACCCCTTCGACGGCTTCCCCTTCGGCTCCG---G------C
AGCAACAGCAGC------GGCAGCCTCATCCCGCGCACCTCCTCCGACACGGCGGCCTTCGCGGGCGCGCGCATCGACTG
GAAGGAGACGCCCGAGGCGCACGTGTTCAAGGCGGACGTGCCGGGGCTGAAGAAGGAGGAGGTGAAGGTGGAGGTGGAGG
ACGGCAACATCCTCCAGATCAGCGGCGAGCGGAACAAGGAGCAGGAGGAGAAGACCGACACCTGGCACCGCGTGGAGCGC
AGCAGCGGCAAGTTCCTCCGCAGGTTCCGGCTGCCGGAGAACGCCAAGGCGGAGCAGGTGAAGGCGTCCATGGAGAACGG
CGTGCTCACCGTCACCGTGCCCAAGGAGGAGGCCCAGAAGCCCGAGGTCAAGTCCATCCAGATCTCCGGCTAGGCGTCTG
CGCGCTCGCTGC---GCGATGAGGTGGA-------CTGCAGAGCAGAGGTGTGGAGTTTCGCCCCGGTCGTCGTGATGAA
--------------------------------------------------------------------------------
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--------------------------------------------------------
>chr4D_1_TraesCS4D01G213300
CTCCGGTTTTGGGAAGCTTACAGAAGCTTCCCAAACCGGGTTTTTTTTCAATTCGTCGGTCATTTTCCGGTGAGGTTTTA
CTCGGGTTTTCGTTTTTTA-------TTTGTTTATTTAAATGCCTGTTTTTCAAAATTGTTTTTTT-ATTTTGTGTTCTT
TTAGAAAAACCAATGGTTTTTTCAAAATTGACAATTTT-TTTTCAAATTCGATGAACTCTTTTCAAAATTGTTGAACTAT
TTTCAAATTAAATGAACTCTTTTTAAAATCATTGAACTCTTTTGAAATTCGATGAACTTTTTC-AAATTTGATGAACT--
------------------------------------------------------------------------------CT
TTACTAATTCACTGAACTTTTTTCAAAATCAATGAACTTTTTATCAAAATTGGTGAACTTTTTTTCAAATTCAATGAACT
TTTGTCAAAATTGAT------------------GTTTTTTCAAATTTGATGAACTTTTT-TCCCATTTTTTGGTGATTGT
TTTAAAAACTGATGAAA---------------------TTTTCTTAAAATCAATGAAC--TTTTTTGAAAATCGATGAAC
TTTTTCCAAAAT-ACGATGAA-----------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------G---TTTTTTCAAAAACGATGAACTTTTT-CAAATTTTGAAAAGTCAACAT
TGTGAACTACGATAGGTCAAAGGTTCAATGTTCAACTGATGCCCGAGTTTTTCTT-TT---TTGAGAATCAACTGATGCC
CGGGCTAGGTGGAG-TTTTTCTGTTGAAATACGTTCTTTTT----AATTGACTCGTACTTAGACAAATAGAAGTGTTTCC
TACTATTATTGAACAGCTTAGGGATGTCAGCCCAG-TGGTTGTCGCGTCACGCCGTTGACCTAAGACCTAGCAGTTTTCT
GGGCCGGCCCGCTATGCATCTGCTGCGAGCGCCAGCAGCCGTAACTAGAAGCTGCTGGTGTCTTCTCCACGACACCGGAG
CAAATCAATCCCGGCCCAACCAACGAACACAATCCAGTGACCTCGAGTCTTCACGGGAAGACAAATAGAATTCTCTAGAA
G---TG-CTTTCTCCTTCTCCACCGT-ATCATCCCCAG--CTCTATAAATTCTTCCTGGTACCGAGCGACAGAAACCC-A
AGAAAGTCTGAAC-AAATCACCGATCAAA-GAACGATCCCTCCCAAATCAATTGCTCACCCTTCCGCTTCC-AACAAATC
A------GTCGATTCCTTCCACCAGCAGCTTGAATCCCC---------A---------CCGACAATGTTGCTGATCCGCC
GCAGCAACGTGTTCGACCCCTTCTCCCTCGACTTCTTCGACCCCTTCGACGGCTTCCCCTTCGGCTCCG---G------C
AGCAACAGCAGC------GGCAGCCTCATCCCGCGCACCTCCTCCGACACGGCGGCCTTCGCGGGCGCGCGCATCGACTG
GAAGGAGACGCCCGAGGCGCACGTGTTCAAGGCGGACGTGCCGGGGCTGAAGAAGGAGGAGGTGAAGGTGGAGGTGGAGG
ACGGCAACATCCTCCAGATCAGCGGCGAGCGGAACAAGGAGCAGGAGGAGAAGACCGACACCTGGCACCGCGTGGAGCGC
AGCAGCGGCAAGTTCCTCCGCAGGTTCCGGCTGCCGGAGAACGCCAAGGCGGAGCAGGTGAAGGCGTCCATGGAGAACGG
CGTGCTCACCGTCACCGTGCCCAAGGAGGAGGCCCAGAAGCCCGAGGTCAAGTCCATCCAGATCTCCGGCTAGGCGTCTG
CGCGCTCGCTGC---GCGATGAGGTGGA-------CTGCAGAGCAGAGGTGTGGAGTTTCGCCCCGGTCGTCGTGATGAA
ATAAAATCAGAGTTTGGTT--------GTGCGCGGTGTGTTAGTACTCAGTGT----TGTGAGAATGGTCCAATGTTGCA
GCCAGTGTTTTGAGTCTCTCGCGTCTGTGTTTTGAGTCTAGTTTGTTCGTCAATCTGTAATT----CATCAGCAACTGAG
TAAATCCATTACCATCTCCGTCTCGGATAAGAGACGGATATCTCTTATCGGAGCCCTTGACTTATACACCTTTTCTTTGT
AATAGCAATAGCATTTCATATTTTATGTTATATATCTTGCTATTATTTTATTGTTTACTTACTCAGCATAAGTTGTTGGT
GTATATAAGTGAGCTAGTTCATTTTGATTTTGTGTTTGACATATTAAACGCTAATTTTATTTCACATTTGTTTAAGTTTA
AACCGTAATTATTTTATAGCGCTTATTTACCCTCTCTAGACGACATTTACGGTCTTTCAGCAATATGTCGTGGTCTAGTC
TAGACGATGTTACCTTATATAAATCATCGATGCAAAGACCAAAGACCAAATGCAGACCATCATTAATTTAGATGAACTAT
TTGAAGCATAATCTTTGAATCATTTGAGAGCATAGTGCCAATGACTATGATTAGATTGTGCGCACATCTGCGTAGAGACC
GAGATTTTGTTATGTATAAAATGCAACATTTATATAATATATGTGAAACTTCAAAAAGAGCATAGTGCCAATGACTATGA
TTAGATTGTGCGCACATCTACGTAGAGACCGAGATTTTGTTATGTATAAAATGCAACATTTATATAATATATCTGAAACT
CCAAAAAGATTTAGAACTTGCAAATAAGAACTCTTAGGGGCTATTTGGTTGGAGACTTAAATTGCCATGTCTAAGGTGAG
GTACTAGCCATACCTGTGGCTTGCCATAATGTGTGGCAAAATCAAACTGTTGGGTTGGTAGCCATGCCTTAGGTTAGGTG
TGGCAGATTTTGTGTGGCGTGTGTTTGGATGGCTTCCACAAATGTTTGGCAAAAAG
>chr3B_45
--------------------------------------------TTTTCACTTCATTGGTCATTTTCTGGTGCGATTTTA
TTCGGGTTTTCGTTTTCATTTTTCCTTTTGTTCCTTTAAATGCGTGTTTTTCAAAATCAATTTTTTTATTTCGTGTTATT
TAGAAAAAACTGATTGTTTTTCCAAAATCAATCAACTCCTTTTCAAATTTGATGAACTCTTTTCAAAATTGTTGAACTGT
TTTCAAATTCAATGAACTCTTTTCAAAATC-TTGAACTATTTTCAAATTCGATGAACTTTTTCCAAATTCGATGAACTTT
TTCCAAATTCGATGAACTTCTTCCCAAATTCGATGAACTTTTTCAAAATTGTTGAGCTTTTTTAAAATTCAATGAGCCCT
TTTCAAATTCGCTGATCTTTTTTCAAAATGGATGAAGA------------------------------------------
----------------------------------TTTTATCAAAATTGATGAACTTTTT-TCCATGTTTTGGTGAAGTTT
TTTAGAAATCGATGAACGTTTCTCAAAATTAGTGAACTTTTTCTAAAAATCAATGAAC--TTTTT---------------
---------------------------GAATCTGTGATTTTTTTTCAAATTCCGATGAACGTTTTTTCAAA---------
--------------------------------------------------------------------------------
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--------------------------------------------------------
>chr5B_169
TTTTTA--------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------TCAAAATTGATGAACAT-TTTTC--ATTTGATGAACTCTTTTCAAAATCGTTGAACTAT
TTTCAAATTCAATGAACTCTTTTAAAA-TCGTTGAACTCTTTTCAAATGCGATGAAATTTTTCCAAATTCGATGAACTTT
TTTCAAAATCATTGGACCTTTTTCAAAATT-GATGAAGTCTTATTCACT-------------------------------
--------------AATTTTTTTTTAAATGGATGAT-TTTTTATCAAAATTGATGAACTTTTTT-CAAATTCATTGAAAA
AAATTCAAAATCGAT------------------GTTTTTTCAAATTTGATGAACTTTTTCTCCATTTTTCGATGAACTTT
TCTAAAAATCGATGAAAGTTTCTGAAAATCAATG----------------------AACTTTTTCC--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------GAAATACGATGAACTTTTTTCAGATTTTGAAAAGTCAACGT
TGTCAACTATGATAGGTCAAAGGTTCAATGTTCAACTGATGTCCGAGTTTTCTTTGTT---TTGAGAATCGACTGATGCC
CGGGCTATGAGGAG-TTTTTTTGTTGAAATATACGTTTTTATATAAAATAACTCGTAATTAGAAAAATAAAATTGTTTCC
TA---------AACAGATTAGGGATGTCAGCGCAG-TGGTTGTCGCTGCGCGCCGT------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------
>chr7A_169
TTTTT---------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------TGAAATTTGATGAACTTTTTTCAAAATCATTGAAAGTT
TTTC------------------------------------------------------------AAGTTCGATGAACT--
------------------------------------------------------------------------------CT
TTTCAAATTCCCTGAACTTTTTTCAAAATGGATGAACTTTTATCG-----------------------------------
-----------------------------------------AAATTCAATGAACTTTTT-TCCATGTTATGGTTAACTTT
TTTAAACATCGATGAACGTTTCTCAAAATCAATG----------------------AC--TTTTTTTAAAATCAATGAGC
TTTTTCCAAAAATACGATGAACTTTTCAAATCTGTGATTTTTTTTCAAATTATGATGAACCTTTTTTCTTCAAAATTGAC
ATTTTTAAAATTTGTGCTTTTTTTCCAGATATTGATGAACTC--TTTTTCCAAGACGGTCCATCTTTCTATTTTTAAAAT
TTATGTACTTTTTT----CCAATTTCTGATTTTTTTTTTGAAAAACGGTGAACTTTTTTCAATTTTTGAAAAGTCAATGA
TGTCAACTATGATAGGTCAAAGGTTCAATGTTCAACTGATACCTGAGTTTTTTTT-TT----TGAGAAGCAACTAATGTT
CGAACTAGGAGGAG-TTTTTCTATTGAAATATACGTTTTTT----TAATCACTTGTACTTGGACAAATAGAAATATTTCC
TGCTAGTAAACGACGA---AGGGATGCCAGCACAG-TGTTTGTCATGTCGCGCCGTTGTCCT------------------
--------------------------------------------------------------------------------
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>chr1A_169
TTTTT---------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------TCAAAATTGTTGTAATTTT-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--TCAAATTCGATGAACTTTTTTAAAAATGGATTAACTTTTTATCAAAATTGATGAACCTTTTTTCAAATTCAGTGA---
-------------AT------------------TTTTTTTCAAATTCGATGAACTTTTT-TTCATTTTTTGGTGAACTTT
TTTAAAAATTGATGAACGTT------AATCCATG----------------------AACTATTTTTCAAAATTGATGAAA
TTTCCATT-AAATACGATGAACTTTTCGAATCTGCGATTTA-----AAAAAATCATGAACTTTTTTTAGAATCAATATTT
-TTTTTCAAACTCATGATGTTTTCTTAGATATTGATGAAACTCTTTTTTTCAAAATCGTTCAA----CTTTTTTTCTAGT
TTATGAACTGTTTTTCTTCCAATTTCTGCG---TTTTAAAAAAAATGATGAACTTTTTTCTAATTTTGAAACGTCAACGC
TGTTAACTACGATAGGTCAAAGGTTCAATGTTCGACTGATGCCCGAGTTTTTTTT-TTGTATTGGGAATCAAGTGATGCC
CGA-CTAGGAGGAGTTTTTTTTGTTGAAAGTTATGTTTTTT----AAATGATTCATACTTAGACAAATAGAAGTGTTTCC
TACTACTAAAATGCAA---AGGGATGTCATGTCAAATGGTTGTCACGTCGCGCCGTTGACCT------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------
>chr4A_206
AACTT---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------TTTTCAAAATGGATGAACATTTTATCAAAATTGATGAACTTTTTTTCAAATTCAATGA---
-------------ACTGTTTTCAAAGTCGATGATTTTTTTCATATTTGATGAACTATTT-TCCATTTTTTGGTGACCTTT
TTTAAAAATCGATGAACAACTGTCAAAATCAAT-----------------------AATTTTTTTTGAAAATCGATGAGC
TTTTTCCAAGAA-ACGATGAACTTTTTAAATCTGTGATA--TTTTCAAATTTTGATGAACTTTTTTTTCAAAT-------
-----------------TTTTTTTTCAAATATTGATGAACTC--TTTTTTCAAAATCGTTCAT----ATTTTTTCCAAGT
TGTGAT---------------------------TTTTTCCAAAAACGATGAACTTTTTTCAAATCTTAAAAAGACAATGC
TGTCAACTATGATAGGTCAAAGGTTCAATGTTCAACTGATGCCCAAG---TTTTT-TAATTTTGAGAATCAACTGATGCC
CGAGCGGGGTGGAG-TTTTTCTGTTGAAATATACGTTTTTT----AAATGACTCGTGCTTAGAAAAATAGAAGTGTTTCC
TGCTAGTATACAGGGA---AGGGGTGTCAGCGCAG-TGGTTTTCTCGTCGCGTCGTTGACCT------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------
>chr4D_852
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------AGAAGCTGCTCGTGTCTTCTGCACGACACCGGAC
CAAACCAATCCCGGCCCAACCAACGAACACAATCCAGTGACCTCGAGTCTTCACGGGAAGACG-ATAGAATTCTCCAGAA
G---TG-CTTTCTCCTTCTCCACCGT-TC-ATCCCCAGCTCTCTATAAATTCTTCCCCGTCCAGATCGGCAGAAACCC-A
AGAAAGTTCGAAC-AAAGCACCGATCAAA-GAACGATCCCTCCCAAATCAATAGCTCACACTTCCGATTCC-AACAAATC
A------GTCGATTCCTTCCACCAGCAGCTTGAATCCCC---------A---------CCGACAATGTCGCTGATCCGCC
GCAGCAACGTGTTCGACCCCTTCTCCCTCGACTTCTTCGACCCCTTCGACGGCTTCCCCTTCGGCTCCG---G------C
AGCAACAGCAGC------GGCAGCCTCATCCCGCGCACCTCCTCCGACACGGCGGCCTTCGCGGGCGCGCGCATCGACTG
GAAGGAGACGCCCGAGGCGCACGTGTTCAAGGCGGACGTGCCGGGGCTGAAGAAGGAGGAGGTGAAGGTGGAGGTGGAGG
ACGGCAACATCCTCCAGATCAGCGGCGAGCGGAACAAGGAGCAGGAGGAGAAGACCGACACCTGGCACCGCGTGGAGCGC
AGCAGCGGCAAGTTCCTCCGCAGGTTCCGGCTGCCGGAGAACGCCAAGGCGGAGCAGGTGAAGGCGTCCATGGAGAACGG
CGTGCTCACCGTCACCGTGCCCAAGGAGGAGGCCAAGAAGCCCGAGGTCAAGTCCATCCAGATCTCCGGCTAGA------
---------------GCGATGAAGTGGA-------GTGCAGAGCAGTGGCGTGGAGTCTCGCCCCGGTCGTCGTGATAAA
ATAAAATCAAGAAG------AG--TCCGGC-------CGTCTG------------TGCGTGCGAATGGTCCAATGTTGCA
GTCAGTGTTTTGAGTCTCTCGTGTCAGTGTTTTGAGTCCGGTTTGTT---------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------
>chr4B_852
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------AGAAGCTGCTGGTGTCTTCTCCACGACAGCGGAC
CAAACCAATCCCGGGCCAACCAACGAACCCAATCCAGTGACCTCGAGTCTTCACGGGAAGACA-ATAGAATTCTCCAGAA
G---TG-CTTTCTCCTTCCCCACCGTATC-ATCCCCAGCCCTCTATAAATTCTTCCCCGTCCCGATCGACAGAAACCC-A
AGAAAGTCTGAAC-AAAGCACCGATCAAA-GAACGATCCCTCCCAAATCAATCGCTCACCCTTCCGCTTCCTAACACCAG
CTAAATCGTCCATTCCTTCGACCAGCAGCTCGAATCCCC---------A---------CCGACAATGTCGCTGATCCGTC
GCAGCAACGTGTTCGACCCCTTCTCCCTCGACCTCTGGGACCCCTTCGACGGCTTCCCCTTCGGCTCCGA---------C
G------GCAGC------GGCAGCCTCGTCCCGCGCACCTCCTCTGACACGGTGGCCTTCGCCGGCGCGCGGATCGACTG
GAAGGAGACGCCCGTGGCGCACGTGTTCAAGGCGGACGTGCCAGGGCTGAAGAAGGAGGAGGTGAAGGTGGAGGTGGAGG
ACGGCAACATCCTCCAGATCAGCGGCGAGCGGAACAAGGAGCAGGAGGAGAAGACCGACACGTGGCACCGCGTGGAGCGC
AGCAGCGGCAAGTTCCTGCGCAGGTTCAGGCTCCCGGAGAACGCCAAGGCGGAGCAGGTGAAGGCGTCCATGGAGAACGG
CGTGCTCACCGTCACCGTGCCCAAGGAGGAGGCCAAGAAGCCCGAGGTCAAGTCCATCCAGATCTCCAGCTAGGCGTCTG
CGTGCTCGCTGC---GCGGTGAGGTGGA-------CTGCAGAGCAGAGGTGTGGAGTTTCGCCCCGGTCGTCGTGATGAA
ATAAAACCAGAGTCCGGCCGTCTGTGCGTGCGCGGTGTGTCTTGTGCTCTAGTGTTGTGTGCGGATGGTCCGATGTTGCA
GCCAGTGTTTTGAGTCTCTCGCGTCTGTGTTTTGAGCCCAGTTTGCTCATCAGTCTGTA----TTCCATCAGCAACTGAG
TAAATCCATTA---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------
>chr4B_852
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------AGAAGCTGCTGGTGTCTTCTCCACGACACCGGAC
CAAACCAATTCCGGCCCAACCAACGAACACAGTCCAGCGACCTCGAGTATTCACGCGAAGACG-AGAGAATTCTCCAGAA
C---TG-CTTTCTCCTTCTCCGCTAT-ATCAT-CCCAGCTCTCTATAAATTCTCCCTCGTCCCGATCGACAGAAACCG-A
AGAAAGTCTGAGG-AAAGCACCGATCAAA-GAGCTCCCA----GAAATCAATTGCTCACCCTTCCGCTTCC-AACACCAG
CCAAATCGTCGATCCATTCCACCAGCAGCTCCAATCCCCACCGATACGA---------CCGACAATGTCGCTGATCCGCC
GCAGCAACGTGTTTGACCCCTTCTCCCTCGACTTCTTCGACCCATTCGAAGGCTTCCCCTTCGGCTCCG---GCAACAGC
G------GCAGC------GGCAGCCTCGTCCCGCGCACCTCCTCGGACACGGCGGCCTTCGCGGGCGCGCGCATCGACTG
GAAGGAGACGCCCGAGGCGCACGTGTTCAAGGCGGACGTGCCGGGGCTGAAGAAGGAGGAGGTGAAGGTGGAGGTGGAGG
ACGGCAACATCCTCCAGATCAGCGGCGAGCGGAACAAGGAGCAGGAGGAGAAGACTGACACCTGGCACCGCGTGGAGCGC
AGCAGTGGTAAGTTCCTGCGCAGGTTCCGGCTCCCGGAGAACGCCAAGGCGGAGCAGGTGAAGGCGTCCATGGAGAACGG
CGTGCTCACCGTCACCGTGCCCAAGGTGGAGGCCAAGAAGCCCGAGGTCAAGTCCATCCATATCTCCGGCTAGA------
---------------GCGATGAAGTGGA-------GTGCAGAGCAGTGGTGTGGAGTCTCGCCCCGGTCGTCGTGATGAA
ATAAAACCAAGA--------AG--TCCGGC-------CGTCTG------------TGCGTGCGAATGGTCCAATGTTGCA
GTCAGTGTTTTGAGTCTCTCGTGTCAGTGTTTTGAGTCCGGTTTGTT---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------
>chr4B_852
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------AGAAGCTGCTGGTGTCTTCTCCATGAGTCCGGAC
CAAACCAAATCCGTCCCAAACGACGAACGCAATCCAGTGGCCTCGAGTCTTCAGGAGAAGACG-AGAGAATTCTCCAGAA
GC-TTG-TTTTCTCCTTTTTCTCCAT-ACAATCCCCAGCCCTCTATAAATTCT--CCCGTTCCGACCGACAGAAACCC-A
AGAAAGTCTGAACAAAAGCACCGATCAAA-GAACGATCCCTCCCAAATCAATCGCTCACCCTTCCGCTTCCTAACACCAG
CTAAATCGTCGATTCCTTCGACCAGCAGCTCGAATCCCC---------A---------CCGACAATGTCGCTGATCCGTC
GCACCAACGTGTTGGACCCCTTCTCCCTCGACCTCTGGGACCCCTTCGACGGCTTCCCCTTCGGCTCCG---G------C
G------GCAGC------GGCAGCCTCGTCCCGCGCACCTCCTCTGACACGGCGGCCTTCGCCAGCGCGCGGATTGACTG
GAAGGAGACGCCCGAGGCGCACGTGTTCAAGGCGGACGTGCCGGGGCTGAAGAAGGAGGAGGTGAAGGTGGAGGTGGAGG
ACGGCAACATCCTCCAGAT-AGCGGCGAGCGGAACAAGGAGCAGGAGGAGAAGACGGACACCTGGCACCGCGTGGAGCGC
AGCAGCGGCAAGTTCCTGCGCAGGTTCCGGCTCCCGGAGAACGCCAAGGCGGAGCAGGTGAAGGCGTCCATGGAGAACAG
CGTGCTCACCGTCACCGTGCCCAAGGAGGAGGCCAAGAAGCCCGAGGTCAAGTCCATCCAGATCTCCGGC----------
---------------GCGATGAGATGGACTGCAGTCTGCAGAGCAGTGGTGTGGAGTTTCGCCC-GGTCGTCGCGATGAA
ATAAAATCAG--------------TCAGGC-------TGTCTAGTGCTCTAATCTTGTGTGCGAATGGTCCGATGTTGCA
GTCAGTGTTTCGAGTCTGTCGCGTCTGTGTTC-GAGTCCACCTTGTTCATCA----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------
>chr4D_853
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------GAAGCTGCTCGTGTCTTCTCCACGACACCGGGC
CGAACCAAATCCGGCCCAAACGACAAACACAATCCAGCAACCTCGAGTCTTCACGAGAAGACG-AGAGAATTCTCCAGAA
GCATTG-CTTTCTCCTTTTCTCCATA-TACATCCCCGGCCCTCTATAAATTCT--GCCACTCCGATCGACAGACACCAAA
AGAAAGTCTGAAG-AAAGCACCGACCAAA-GAGCTACCA----CAAATCAATCG-TCACCCTTCCGCTTCC-AACACCAG
CCAAATCGTCGATTCCTTTCGCCAGCAGCTCGAATCCCC---------A---------CAGACAATGTCGCTGATCCGCC
GCAGCAACGTGTTCGACCCCTTCTCCCTCGACTTCTTCGACCCATTCGAAGGCTTCCCCTTCGGCTCCG---G------C
A------ACAGCAGCAGCGGCAGTCTCGTCCCGCGCACCTCCTCCGACACAGCGGCCTTCGCGGGCGCGCGCATCGACTG
GAAGGAGACGTCCGAGGCGCACGTGTTCAAGGCGGACGTGCCGGGGCTGAAGAAGGAGGAGGTGAAGGTGGAGGTGGAGG
ACGGCAACATCCTCCAGATCAGCGGCGAGCGGAAGAAGGAGCAGGAGGAGAAGACCGACACCTGGCACCGCGTGGAGCGC
AGCAGCGGCAAGTTCCTGCGCAGGTTCTGCCTCCCGGACAACGCCAAGGCGGAGCAGGTGAAGGCGTCCATGGAGAACGG
CGTGCTCACCGTCACCGTGCCCAAGGAGGAGGCCAAGAAGCCCGAGGTCAAGTCCATCCAGATCTCAGGCTAGGCGTCGG
CGTGCTCGCTGCTGCGCGATGAGAT-GACTGCAGTCTGCAGAGCAGCGGTGTGGAGTTTCGACCCGGTCGTCGCGATGAA
ATAAAATCAGGGGTAAAATCAGAGTCCGGC-------TGTCTAGTGCTCTAGTGTTGTGTGCGAATGGTCCGATGTTGCA
GTCAGTGTTTTGAGCCTCTCGCGTCTGTGTTTTGAGTCCACTTTGTTCATCAGTCTGTACTTATTCCATCAGCAACAAAT
TAAATCCATTA---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------
>chr4A_854
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------AAGCTGCTGGTGTCTTCTCCACGAGACCGGAC
CAAACCAAATCCGGCCCAAACGACGAACACGATCTAGTGGCCTCGAGTCTTCACGGGAAGACG-AGAGAATTCTCTAGAA
GA-TTGGCTTTCTCC--TTTCTCCAT-ACAATCCCCAGCCCTCTATAAATTCT--CCCATCCCGATCGACAGAAACCC-A
AGAAAGTCTGAAG-AAAGCACCGATCAAAAGAGCTACCA----CAAATCAATCGCTCACCCTTCCGCTTCC-AACACTAA
TCAAATCGTCGATTCCTTCCACCAGCAGCTCGAATCCCC---------A---------TCAACAATGTCGCTGATCCGCC
GCAGCAACGTGTTCGACCCCTTCTCCCTCGACTTCTTCGACCCTTTTGACGGCTTCCCCTTCGGCTCCGGCAG------C
A------GCAACAGCGGCGGCAGCCTCGTCCCGCGCACCTCCTCCGACACGGCGGCCTTCGCGGGCGCGCGCATCGACTG
GAAGGAGACGCCCGAGGCGCACGTGTTCAAGGCGGACGTCCCCGGGCTGAAGAAGGAGGAGGTGAAGGTGGAGGTGGAGG
ACGGCAACATCCTCCAGATCAGCGGCGAGCGGAACAAGGAGCAGGAGGAGAAGACCGACACCTGGCACAGGGTGGAGCGC
AGCAGCGGCAAGTTCCTCCGCAGGTTCCGGCTCCCGGAGAACGCCAAGGCGGAGCAGGTGAAGGCGTCGATGGAGAACGG
CGTGCTCACCGTCACCGTGCCCAAGGAGGAGGCCAAGAAGCCCGACGTCAAGTCCATCCAGATCTCCGGCTAGGCGTCTG
CGTGCTCGCTGC---GCGATGAGGTGGA-------CTGCAGAGCAGAGGTGTGGAGTTTCGCCCCGGTGGTAGTGATGAA
ATTAAAA-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------
>chr4A_1055
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------CACCGATCAAA-GAGCTCCCA----GAAATCAATCGATCACCCTTCCGCTTCC-AACACCAG
CCAAATCGTCGATTCCTTCCACCAGCATCTCGAATCCCC---------ACCGATACGACCGACAATGTCGCTGATCCGTC
GCAGCAACGTGTTCGACCCCTTCTCCCTCGACTTCTTCGACCCCTTCGACGGCTTCCCTTTCGGCTCCG---G------C
A------GCAACAGCAGCGGCAGCCTCGTCCCGCGCACCTCCTCGGACACGGCGGCCTTCGCGGGCGCGCGCATCGACTG
GAAGGAGACGCCCGAGGCGCACGTGTTCAAGGCGGACGTGCCGGGACTGAAGAAGGAGGAGGTGAAGGTGGAGGTGGAGG
ACGGCAACATCCTCCAGATCAGCGGCGAGCGGAACAAGGAGCAGGAGGAGAAGACCGACACCTGGCATCGCGTGGAGCGC
AGCAGCGGCAAGTTCCTGCGCAGGTTCCGGCTCCCGGAGAACGCCAAGGCGGAGCAGGTGAAGGCGTCCATGGAGAACGG
CGTGCTCACCGTCACCGTGCCCAAGGAGGAGGCCAAGAAGCCCGAGGTCAAGTCCATCCAGATCTCCGGCTAGA------
---------------GCGATGAAATGGG-------ATGTAGAGCAGTGGTGTGGAGTCTCCCCCCGGTCGTCGTGATGAA
ATAAAATCAAGA--------AGAGTCCGGC-------CGTCTG------------TGCGTGCGAATGGTCCAATGTTGCA
GTCAGTGTTTTGAGTCTCTCGTGTCAGTGTTTTGAGTCCGGTTTGTT---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------
>SNPs
S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------S---S-S----------S----S-S-----
S---------------SSS-------------SS---------S-------------SSS-----------S-----S--
-SSS------SS--S----------------SS-SS-------------S------------------------------
---------S-------------S------S------------S-------------------------S----------
--------------------------------------------------------------------------------
--S-S-----S------------------SS---------------------S-------------------------SS
SSSS-------S---------------------------------------------------SS-----S-S-S-S-S-
--------S-----------------------------------S-----------------------------------
-----------S--------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------S-
---S------------------------------------------------S---------------------------
-------------------------------SS-SS-----------S--------------------------------
-----S---SS-----S--------------S-----------------S------------SSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------------------S
----S----------------------------------------------------------S----------------
---------------------------------------------------------S--S----S--------------
-----------------S--------------------------------------------------------------
--------------------------------------------------------------------S-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------S---------------------------------------------
--S-----------------------------------------------------------------------------
--------------S--S----------------------SS-SSSSSSSS----------S------------------
--------------------------------------S---------S---S------S--------------------
-----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_75
-------------------------------------------------------TCGGTCATTTTCCGGTGAGG-----
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------
>reverse_2098
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------TTGTGCGCGGTGTGTTAGTA-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------
