>input_sequence_71188
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------------------------------------------------------------------GTATATATA---CC
CAGCACAAGCACTTACGGAAGCAAGTCAAGCAACACAATCTCA-GCTTGAGGATCAACACAGCACCGGGCTTACAC-TTC
CTCTGCTAGCTCTCGTTGCCTTCCTTCAAGTTCCAACTGCAATGGCTGCCATGAGACTCAGCCTCCTCATCATGGCCGTG
ATGGCCGTCCTAAGCACCACGTCGGCGGCAAGCTACAACGTTGGCGAGCCGGGCGGTGCGTGGGACCTCAACACCAACTA
CGGCACCTGGGCGTCCTCCAGGAAGTTCCAACCCAGCGATCAGATCGTCTTCAAGTACTCCCCTCAGGCGCACAACGTCC
TTGAGGTTAGCAAGGCCGACTACGACTCGTGCAGCACCGTCAACCCTATTGCGACCCTCAACTCAGGGAACGACATCGTC
ACCCTCACCGCCGTTGGCACCCGCTACTTCATTTGTGGGTTCCCTGGCCACTGCACTGGTGGCATGAAGGTCAAGATCGA
CGGCGTGCCTGGCTCCTCCTCGCCA---TCACCCGCCCCGGCCAGTGGCCCCAATGCAAGCAACGCTCCTCCAACCACGC
CTGTCTCTACCGCCACCTCCGTGAAGGCCACGGGGTTTGGCTTCGCCATCCTGCTTGCCTTTGTCGGTTTCATGGCTTGA
G--TACATCTGTATAGCCCCACGCACATACCTAATTTATGTAAAGTCAAATAATCATTCCTA------------------
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------------------------------------------------------------------------------
>chr2D_1_TraesCS2D01G543600
CCACAACCATTAATGTGTTTTCCTAAGTCTAGTATGACTAATTTTTTGAAAATATGTAGAGTGATTTTTTAGTTGAAAAT
GTGGACAAG-TTTTAATAGGAAAAAGTGTAGTGAATGTACTATTTGCTAATTTTCAAATCCATTTAAGTATGTGTTTTGT
TATAGATGACATGTTAAAGTGTCCCATAATGAAATTTTACACATTCATAAAATACATCTATGTGTGTGTGTGTGTGCCCG
CGTGTGTATGTGAAATTGTTTTCAGAAGTTCTTGACACTTCATAATAAGTAGATTTCGTCAAAACA--GGGCTAGCTGCA
TGGACTGAACACGAAAACATATTTCTGCC---------------------------------------------------
--------------------ATTGTCGTGAAGGAGCT-----TTATTTTTATTTTTTAAATTTACTTGAATTTAATA--A
TATATCACTCAATAATTATTTTACGCATTGTTATTTTGCAATACATCCACGATGATGTAATGTGG-TCCTTT-GTTCTGC
TTAATTCATAGGCTGAAAGCTTCATTTTGCCAATTTTAATCATGTTAAATCTCTA-------------------------
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-----------------------------AATAAATACCATTTGCCATCTAAGATGAAAACTGTAACCTTTTGTTTTTGA
AACTTGAA-GCTAGCATATTATTTAGTTGTGCCGTGGGATTCAGCCAATTGGGAGCTTGTAATTTTAGAGGAGAAAGTTT
TTT-ATTTATTTAGAGAGGAGAATTAGGAGTTGAAATGCGGCTGTATCATTCGATTTACATCTAGAAGATTTGTGAATTG
TGAAGATGGTCT-----------------------------------ACGTCTTTTTTTAGGGAAAAGATGTTCTACGTC
TTGTAGGTAGACCGCGTCGATATTGGAGCAGACG----GCAATGGCTCCATGAGGACGCGTGAAAAGGTCAAAGAG----
----CACAGCCCGGTCTTCAGATGTTCAGTATGACCAAGTACATACCAGCTGCCTAGCTTGTGTTCCCACGTAGAACATT
CAAAGTCTGGGCATATTTCCACCTACCACACATGTTTCATCAACTGACCTGGGTATAGCCTGTACTGTATATATA---CC
CAGCACAAGCACTTACGGAAGCAAGTCAAGCAACACAATCTCA-GCTTGAGGATCAACACAGCACCGGGCTTACAC-TTC
CTCTGCTAGCTCTCGTTGCCTTCCTTCAAGTTCCAACTGCAATGGCTGCCATGAGACTCAGCCTCCTCATCATGGCCGTG
ATGGCCGTCCTAAGCACCACGTCGGCGGCAAGCTACAACGTTGGCGAGCCGGGCGGTGCGTGGGACCTCAACACCAACTA
CGGCACCTGGGCGTCCTCCAGGAAGTTCCAACCCAGCGATCAGATCGTCTTCAAGTACTCCCCTCAGGCGCACAACGTCC
TTGAGGTTAGCAAGGCCGACTACGACTCGTGCAGCACCGTCAACCCTATTGCGACCCTCAACTCAGGGAACGACATCGTC
ACCCTCACCGCCGTTGGCACCCGCTACTTCATTTGTGGGTTCCCTGGCCACTGCACTGGTGGCATGAAGGTCAAGATCGA
CGGCGTGCCTGGCTCCTCCTCGCCA---TCACCCGCCCCGGCCAGTGGCCCCAATGCAAGCAACGCTCCTCCAACCACGC
CTGTCTCTACCGCCACCTCCGTGAAGGCCACGGGGTTTGGCTTCGCCATCCTGCTTGCCTTTGTCGGTTTCATGGCTTGA
G--TACATCTGTATAGCCCCACGCACATACCTAATTTATGTAAAGTCAAATAATCATTCCTAGTAAATATATGTGTGTAT
ATTCCACTAATTGGATACACGACTTTGAGTTTCTTTTAATTCATTTTTGTTGAGAACGAAGAGCCGAGTGAATCAGCTCC
TCTGTTGAGCGACATGTACTATGATTAAGTCAGGGAAGGTG-CGTTTTGGTTGATTAGTAATACCAGTAATCGTGTACGT
GCACGTCT---AGTTTGATAGTAATATAATTTCCTTGATTAATATTGATAGTAAGATTAAT------ATTCTCTTTAATG
TAACTAATGTCGTTTTACAAATTACGATCAATGCAATTAACATGTTTCCAAATTATTCATGATGTGATGGATACATCGGT
GAAGCAGCGTGTGACGTTGCATATAGGTTGCCCGATTG---CTCGGATCATCTGGATTCACCAAGCTCATGC--------
--------------------------------------------------------------------------------
-------------AATACATTTT-----TTTCTCAGTTCATATTGAAGCAACGAATAATCTTAATTTTTTTCCTAGGGTA
TCTTAATTTGATTTTACCTATGACTGATGATCTATTTCGTTGTCTGTCAAGAAACAATAAGGATTAGAACTCACACATCT
GTGTGTTGCTAGCAATCAGTTAATCAATTGACTCATTGGCGTGTGATCACGCTTGGGCAGCACCACTGTTGT-AAAAACA
GTGTGTGTATAATATGAA-GGTCTGCCGGGTGACATTCTATTAGTCTTCTCTCTCCAGTGTATTTTGAGTTTTCTGGAAT
TCCAAAATTTGTTGAAGTCCAAAGTTTCAG----------ATTTTCATAGAATTGAAAATTTTCTGAGCATGCAATTTGT
TGAAGTTGAAATTTTTGAAA---TTTTAGCCATAGTTCAAACTTCCAAAAGTTTGAAAAATTGGAAGTTTTAAATCCCAT
AAAAATTACTTGGGCCTGTTATATTTCTCAAACTATATAATATACTTTCTGAAAGTTACCAAAAAGAGAACTTTTACTTG
TAGCATA--CTTTCTAGAAAGGGAAAACACTAGTTAGAAAGTGAACACCGTGGAGTCATCTGACCGTGACACAAGGGC
>chr2D_8
-------CATTAATATGTTTTCCTAAGTCTATGATGACTAATATTTTCAAAATGTGCAGAGTGATTTTTTAGTTGAAAAT
GTGGACAGTATTTTAATAGGA-AAAGTGTAGTGAACATACTGTTTGCTAATTTTCAAATCCAGCTAAGTATATGTTTTGT
TATAGATGACATGTTAAAGTGACTCGTAATG-AATTTTACACATTCATAAAATACATCTATGTGTGTGCGC----GCCTG
CATGTGTATGTGAATTTGTTTTCAGAATTTCTTGACACTTCATAATAAGTAGATTTCGTCAAAATATTGGCTA-----CA
TGGACTGAACACGAAAACATATACCATTCGGCGTGGATGGTGAGCTATGTCAAAAACAATGAACAATTAAAAAAAGAACA
TGTAAACATATTTCTGCCATATTGTCGTGAAAGACCT-----T--------TTTTTGAAATTTACTTGAATTTAATA--A
TATATTGCTCAACAATTATTTTACGCATTGTTATTTTGCAGTACATCCAAGATGATGTAATGTGGGTCATTT-ATCCTAC
TTAATTCATAGACTAAAGGCTTCATTTTACCAATTTTAATCATGTTAATTGTCATATCAAACAAATACACGCTCGACACC
AGGGTCCCTTCCCCTTCGTACCCCCTCGCGCCTCCATCGTACCCCTTCGCGTCACTCCCGCGAGCGACCGAGGGGGCAAA
CCCTAGCCGCCGCCGGGGCTAGGAATCCTCCAGCTTCCTCCCTCGTCGCCGCCGATGCGCGCCGGCGATCTGGTCGGCAT
AGGCGCCGGCGGGGATCTCTCCTCTCCTCGCTCGATGCCACGCGGCGCGGGACGATGGCTTCAGCGATGGCGCCATCCTG
ATCCAAGGCACGGCAGCGCAGCGGCTCCCGGCGGCGGCGCTTGGGGGCGCGGGTGGAGCTCGGCTGGGCATGATGTGGTG
ATCGGCTGGACATGGCCAGAGGATGGAGGTGGGGCTGGGCGTGGCCGGCGGCGGTGGCTGCGGCGGTGTCCGGCCCGGAT
TCGTTCTTGGCGGTGGCGATGGCGACGGCTGACCTAGATCCGACCATGGTGGTGGCGGCGTCTCCTTCACCGGGGATGAC
GGGCCAGGTGGTGGGTCCTTGTTGCGGCGTCGGTGGCAGCAGGATCTTGGGATCCCGTGTCCGGGCTCGTCGCAGGATGT
GCGTTGCGGCCGGAGCTTCCTCCGGCGTCGACGATGCTTGATGCGGGATCATGGCGGCGGTTGCCGTTGTATGGGCAACG
ACAGCAACTGGTGTGACGGTGGGTGCTCCCTGTAGCGCCCAGAAGCGGGGCGGCGGCCCCACTTCATCAACGGTGGTGGA
CTCCGGGGTCGTGTGGGCGACTCGGAGTTCGGATCTCGAGATGGTGACGACCTTCTGAGGCTGGTGGCGGTATGGGACGT
CCACGCCATCAACTGACCGGGTTCAATGCGGCTCGGGAGGTGACACATGAGCCTCTCTCGGAGTTGTCGACCGGTGCCTG
TCATCGGCAGGTGAAGCCACCGGTGGATGTGCTACCGGCGGATGCTACGCACGGCGTCTTATACGGAGACGTCAAGTTAT
GCCTGCTACCAGCAGGTGACGCACGACGGCTCTGGCGGAGGTGTCAAGTTTAGCATGTTGCTGTTGGATCGAAGGTGGAG
CGACAGTAGCAGGAGGCAGACAGTATGGGGCGTCTTTGTCTTCTGTTGTCTCCTCCAGAGGTATCCGTCTATCGAGGCGT
CGGTAGACGGATAAAGGCGGATGGTACAGACAGCTTCAACGACGAGGTTACGAACTCCGCTGGAAATACAAGATCTCTGA
TTGGGCTATGTCGTCCCGCGCTTGCATCGTGTCCTTGCTGAAGGTGGTGGATTGAAGCTTTGCTTTGAGGATGAGAATCT
GAAATTCAATCTTGTGGTGGACTCGCTATCATCGGCGCACGTGCCGTGATTCCTTCTTGAAGGGGTAGCATAGGAGTTGT
GTATTTTTCGTTTATGTTGTCTTAAATCATAGGGTTAGTGGTTATCTGGGGGAGTTACTGCCGCAAGGTATATGGCCTCT
GGGTTTGTTTTTTTGTTTTTTTCCGAGTCGATGGTGTTCGGCTGCCGGATTTTGCTTTATTAATATATGGCTGCATGCAT
CGTCCCGATGCACAGGCTGGGGGTTATCCTCGTTTAAAAAAAATTCAAAGAAATACATTTTGATGTAATGAAAGCTATTC
TTCTTGATTTAAATGTTGGACTTTTGTGCAATAAATACCATTTGCCTTCTAACATAAAAAATGTAAC---TTTTTTTTGA
AACTTGAAAGCTGGCATATTATTTAGTTGTGCCGTGGGATTCAGCCAATTGAAAGCTTGCAATTTTAGCAGAGAAAGTTT
TTTTT-----TTAGAGAGGAGAATTAGGAGTTGAAATGCGGCTGTATCATTGGATCTACTTATAGAATATTTGTGAACTG
TGAATATGGTCA-----------------------------------ACGTCTTGTAGC---------------------
------GTAGACCGCATCGATATTGGATCAGACG----GCAATGGCTCCATGAGGACGCGTGAAACGGTCA---------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------
>chr2A_8
-------CATTAATGTGTTTTCCTAAGTCTAGGATGACTAATTTTTTGAAAATATGTAGAGTGATTTTTTAGTTGAAAAT
GTGGACAAG-TTTTAACAGGAAGAAGTGTAGTGAACGTACTATTTGCTAATTTTCAAATCCATTTAAGTATGTGTTTTGT
TATAGATGACATGTTAAAGTGTCCCATAATTAAATTTTACACATTCATAAAATACATCTATGTGTGTGTGC----CCCCG
CATGTGTATGTGAAATTGTTTTGAGAAGTTCTTGACACTTCATCATAAGTAGATTTTGTCAAAACA--GGCTA-----CA
TGGACTGAACACCAAAACATATTTCTGCC---------------------------------------------------
--------------------ATTGTCGTGAAAGTCCTTTAATT--------TTTTTGAAATTTACTTGAATTTAATATAA
TATGTCACTCAATAATTATTTTACGCATTGTTATTTTGCAATACATCCACGATGATGTAATGTGGGTCATTT-TTCTG-C
TTAATTCATAGGCTGAAGGCTTCATTTTACCAATTTTAATCAAGCTAACTGTCATATCAAAGAAAAACTTTTTGTT----
--------------------------------------------------------------------------------
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--------------------------------------------------------------ATGTAATGAAAGCTATAC
TTCTTGAATTAAATGTTGGACTTCTGTGCAA------------------TAAGATGAAAACTGTAACTTTTA-TTTTTGA
AACTTGAAAGCTGGCATATTATTTAGTTGTGCCATGGGATTCAGCCAATTGGAAGCTTGCAATTTTAGAGGAGAAAGTTT
TTTTATTTACTTAGAGAGGAGAATTAGGAGTTGAAATGCGGCTGTATCATTCGATCTACTTCTAGAAGACTTGTGAATTG
TGAAGATGGTCTACGTCTTCTTTTTTCTTTTAGGGAAAAGATGTTCTACGTCTTGTAGA---------------------
------GTAGACCGCGTCGATATTGGAGCAGACGATCGGCAATGGCTCCACGAAGACTCGTGAAAAGGTGACCAGGCCAA
ACAACACAGCCCGGTCTTCAGATGTTCAGTATGACCAAGTACATACCAGCTGCCTAGCTTGTGTTCCCACGTAGAACATT
CAAAGTCTGGGCATATTTCCACCTACCACACACGTTTCATCAACCGACCTGGGCATAGCATGTACTGTATATATA---CC
CAGCACAAGCACTTACGGAAGCAAGTCAAGCAACACAATCTCA-GCTTGAGGATCAACACAGCACCCGGCTTATAC-CTC
CTCTGCTGGCTCTCGTTGCCTTCCTTCAAGTTCCAACTGCAATTGCTGCCATGAGACTCAGCCTCCTCATCATTGCCGCG
ATGGCCGTCCTAAGCACCGCGTCGGCAGCAGTCTACAATGTTGGCGAACCGGGCGGCGCGTGGGACCTTACCACCAACTA
CGGCACCTGGGTATCCTCCAGGAAGTTCCAACTCAGCGACCAGATCGTCTTCAAGTACTCCCCTCAGGCGCATGACGTCC
TTGAAGTTAGCAAGGCCGACTACGACTCTTGCAGCATCGTCAACCCTATTGCGACCCTCAACTCCGGGAACGACATCGTC
ACCCTCACCGCCGCTGGCACCCGCTACTTCATTTGTGGGTTCCCTGGCCACTGCACTAGTGGCATGAAGATCAAGATCGA
CGTCGTGCCTAGCTCCTCCTCACCA---TCACCCGCCCCGGCTAGCGGCCCCAATGCAAGCAACGCTCCTCCAACCACGC
CTGTCTCTACCGCCACCTCCGTGAAGGCCACGGGGTTTGGCCTCGCCATCCTGCTTGCCTTTATCGGTTTCATGGCTTGA
G--TACATCTGTACA---------------------TATGTAAAGTCAAATAATCATTCCTAGTGAATATATGTGTCTAT
ATTCCATTAATTGGATATACGACTTTGAGTTTCTTTTAATTCATTTTTGTTGAGAATGAAGAGCCGAGTGTGTCAGCTCC
TCTGTT--------------------------------------------------------------------------
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------------------------------------------------------------------------------
>chr2A_8
-------CATTAATGTGTTTTCCTAAGTCTAGGATGACTAATTTTTTGAAAATATGTAGAGTGATTTTTTAGTTGAAAAT
GTGGACAAG-TTTTAATAGGAAAAAGTGTAGTGAACGTACTATTTGCTAATTTTCAAATCCATTTAAGTATGTGTTTTGT
TATAGATGACATGTCAAAGTGTCCCATAATGAAAATTTACACATTCATAAACTACATCTATGTGTGTGTG------CCCG
CGTGTGTATGTGAAATTGTTTTCAGAAGTTCTTGACACTTCATAATAAGTAGATTTCGTCAAAATAG-GGCTA-----CA
TGGACTGAACACCAAAACATATTTCTGCC---------------------------------------------------
--------------------ATTGTCGTGAAGGACC-----------TTTATTTTTTTAATTTACTTGAATTTAATA--A
TATATCACTCAGTAATTATTTTACGCATTGTTATTTTGCA-TACATCCATGATGATGCAATGTTG-TCCTTTGTTCTG-C
TTAATTCATAGGCTGAAAGCTTCATTTTGCCAATTTTAATCATGTTAACTGTCGTATCACAGAAATACTTTGTGATCGAG
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----------------------------------------------------------------GTAATGAAAGTTATAC
TTCTTGATTTAAATGTTGGACTTTTGTGCAATAAATACCATTTGCCATCTAAGATGAAAATTGTAACCTTTTGTTTTTGA
AACTTGAAAGCTAGCATATTATTTAGTTGTGCCGTGGGATTCAGCCAATTGGAAGCTTGCAATTTTAGAGGAGAAGGTTA
-TTTATTTATTTAGAGAGGGGAATTAGGAGTTGAAATGCGGTTGTATCATTCGATCTACTTCTAGAAGATTTATGAATTG
TGAAGATGGTCTACGTCTTTT------TTTTAGGGAATAGATGTTCTATGTCTTGTAGC---------------------
------GTAGACTGCGTCGATATTGGAGCAGACG----GCAATGGCTCCATGAGGACGCGTGAAAAGGTCA---------
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>chr2B_951
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----------------TTCCACCAACCTCACACGTTTCTCCAACTCACCCGGGCATAGCCTGTACAGTATAAATAGGACC
CGGCACAGCCGCCTAGCAAGCAA---------ACACATTCTCCCGCTGAAGGATCAATACATCACCTGCCTTATAATCTC
CTCTGCAAGCTC---------TTCTTCCATTTCCAACCGCAATGGCTGCGAGGAGAACCATTCTTCTCGCCATGGCTGCC
ATGGCCATCCTGAGCACGGCGTCTGCGGCAATCTACAACGTGGGCGAGCCGGGCGGCGCATGGGACCTCAGCACCAACTA
CGGCACTTGGGCGTCCTCTAGGAACTTCCAAACCAACGACCAGATCGTCTTCAAGTACTCCCCTCAGGCACACGACGTCC
TCGAGGTCAGCAAGGCAGACTACGACTCTTGTAGCACCGCCAGCCCCGTCACCACTCTCAACTCCGGGAATGATGTTGTC
ACCCTCAACGCCACCGGCACCCGCTACTTCATCTGCGGATTCCCTGGTCATTGTGCGGGTGGCATGAAGGTTAAGATTGA
TGTCATGCCAGGCTCCTCCT---CTACGTCACCTGCCCCGGCCAGCGGCCCAAGTGCAACCAACGCACCCCCGCCGACAC
CTGTCTCCACCGCCACCAATGTGGAGGCCACCGGGTTTGGCCTCGCCGTTTTGCTTGCTGTTGTCGGCCTCATGGCTTGA
GAGTGCATCTCCACATTCGCAGGCACATGTGTACTTTATGTTTAGTTAAGAAATTATTACTAGCAATTATCTGTGTGTAT
ACTC----------------------------------------------------------------------------
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>chrUn_951
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----------------TTCCACCAACCTCACACGTTTCTCCAACTCACCCGGGCATAGCCTGTACAGTATAAATAGGACC
CGGCACAGCCGCCTAGCAAGCAA---------ACACATTCTCCCGCTGAAGGATCAATACATCACCTGCCTTATAATCTC
CTCTGCAAGCTC---------TTCTTCCATTTCCAACCGCAATGGCTGCGAGGAGAACCATTCTTCTCGCCATGGCTGCC
ATGGCCATCCTGAGCACGGCGTCTGCGGCAATCTACAACGTGGGCGAGCCGGGCGGCGCATGGGACCTCAGCACCAACTA
CGGCACTTGGGCGTCCTCTAGGAACTTCCAAACCAACGACCAGATCGTCTTCAAGTACTCCCCTCAGGCACACGACGTCC
TCGAGGTCAGCAAGGCAGACTACGACTCTTGTAGCACCGCCAGCCCCGTCACCATTCTCAACTCCGGGAATGATGTTGTC
ACCCTCAACGCCACCGGCACCCGCTACTTCATCTGCGGATTCCCTGGTCATTGTGCGGGTGGCATGAAGGTTAAGATTGA
TGTCATGCCAGGCTCCTCCT---CTACGTCACCTGCCCCGGCCAGCGGCCCAAGTGCAACCAACGCACCCCCGCCGACAC
CTGTCTCCACCGCCACCAATGTGGAGGCCACCGGGTTTGGCCTCGCCGTTTTGCTTGCTGTTGTCGGCCTCATGGCTTGA
GAGTGCATCTCCACATTCGCAGGCACATGTGTACTTTATGTTTAGTTAGGAAATTATTACTAGCAATTATCTGTGTGTAT
ACTC----------------------------------------------------------------------------
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>chrUn_951
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----------------TTCCACCAACCTCACACGTTTCTCCAACTCACCCGGGCATAGCCTGTACAGTATAAATAGGACC
CGGCACAGCCGCCTAGCAAGCAA---------ACACATTCTCCCGCTGAAGGATCAATACATCACCTGCCTTATAATCTC
CTCTGCAAGCTC---------TTCTTCCATTTCCAACCGCAATGGCTGCGAGGAGAACCATTCTTCTCGCCATGGCTGCC
ATGGCCATCCTGAGCACGGCGTCTGCGGCAATCTACAACGTGGGCGAGCCGGGCGGCGCATGGGACCTCAGCACCAACTA
CGGCACTTGGGCGTCCTCTAGGAACTTCCAAACCAACGACCAGATCGTCTTCAAGTACTCCCCTCAGGCACACGACGTCC
TCGAGGTCAGCAAGGCAGACTACGACTCTTGTAGCACCGCCAGCCCCGTCACCATTCTCAACTCCGGGAATGATGTTGTC
ACCCTCAACGCCACCGGCACCCGCTACTTCATCTGCGGATTCCCTGGTCATTGTGCGGGTGGCATGAAGGTTAAGATTGA
TGTCATGCCAGGCTCCTCCT---CTACGTCACCTGCCCCGGCCAGCGGCCCAAGTGCAACCAACGCACCCCCGCCGACAC
CTGTCTCCACCGCCACCAATGTGGAGGCCACCGGGTTTGGCCTCGCCGTTTTGCTTGCTGTTGTCGGCCTCATGGCTTGA
GAGTGCATCTCCACATTCGCAGGCACATGTGTACTTTATGTTTAGTTAGGAAATTATTACTAGCAATTATCTGTGTGTAT
ACTC----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>chr2D_1039
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-----------------AAGCAA---------ACACATTCTCC-GCTCAAGGATCAATACAGCACCTGCCTTATAATCTC
CTCTGCAAGCTC---------TCCTTCCGGTTCCAACTGCAATGGCTGCGAGGAGAACCATTCTTCTCGCCATGGCTGCC
ATGGCCATCCTAAGCACGGCGTCTGCGGCAATCTACAACGTGGGTGAGCCGGGCGGCGCATGGGACCTCAGCACCAACTA
CGGCACTTGGGCGTCCTCTAGGAACTTCCAAACCGGCGACCAGATCGTCTTCAAGTACTCCCCTCAGGCACACGACGTCC
TCGAGGTCAGCAAGGCCGACTATGACTCATGCAGCACCGCCAGCCCTGTCACCACCTTCAACTCCGGGAATGATGTTGTT
ACTCTCACCACCACCGGCACCCGCTACTACATATGCGGTTTCCCTGGTCATTGCGCGGGCGGCATGAAGGTTAAGATCGA
TGTCATGCCAGGCTCCTCCT---CA---TCACCCGCCCCAGCCAGCGGCCCAAGTGCAAGCAACGCTCCCCCGCCGACCC
CTGTGTCCGCTGCCACCAATGTGGAGGCCACAGGGTTTGGCCTCGCCGTTTTGCTTGCCGTTGCCGGCCTCATGGCTTGA
G--TGCATCTCTGCAGTCGCAGGCACATGTGTACTTTGCGTAT-GTAAAGTAATTATTACTAGCAACTATCTGTGTGTAT
AGTC----------------------------------------------------------------------------
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------------------------------------------------------------------------------
>chrUn_1114
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------------------------TTCCAGTTCCAACCGCAATGGCTGCCAGGAGAACCATTCTTCTCGCCGTGGCAGCG
ATGGCCGTCCTGAGCACCGCGTCAGCGGCAATCTACAACGTGGGCGAGCCGGGCGGCGCATGGGACCTCAGCACCAAATA
CGACACTTGGGCGTCCTCTAGGAACTTCCAAACCAGCGATCAGATCGTCTTCAAGTACTCCCCTCAGGCACACGATGTCC
TTGAAGTCAGCAAGGCAGACTACGATTCTTGCAGCACTGCCAATCCCGTCACCACCTTCAACTCCGGGAATGATGTTGTC
ACCCTCACAGCCACCGGCACCCGCTACTTCATCTGTGGTTTCCCTGGTCATTGCGCGGGCGGCATGAAGGTTAAGATCGA
TGTCATGTCAGGCTCCTCCT---CTATGTCACCCGCCCCGGCCAGCGGCCCAAGTGCAAGCAACGCTCCCCCACCGACAC
CTGTCTCCGCTGCCACCAATGTGGAGGCCACGGGGTTCGGCCTTGCCGTTTTGCTTGCCATTGCCGGCCTCATGGCTTGA
G--TGCATCTCTGTAGTCGCAGGCACATGTGTATTTTATGTATATTCAAGTAATTATTACTAGCAACTATCTGTGTGTAT
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------
>chr2D_1118
--------------------------------------------------------------------------------
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----------------------------AGTTCCAACCGCAATGGCTGCCAGGAGAACCATTCTTCTCGCCGTGGCTGCG
ATGGCCGTCCTGAGCACCGCGTCAGCGGCAATCTACAACGTGGGCGAGCCGGGCGGCGCATGGGACCTCAGCACCAACTA
CGGCACTTGGGCGTCCTCTAGGAACTTCCAAACCAGCGATCAGATCGTCTTCAAGTACTCCCCTCAGGCACACGATGTCC
TTGAAGTCAGCAAGGCAGACTACGACTCTTGCAGCACGGCCAACCCCATCACCACCTTCAACTCTGGGAATGATGTTGTC
ACCCTCACAGCCACCGGCACCCGGTACTTCGTCTGTGGTTTCCCTGGTCATTGCGCGGGTGGCATGAAGGTTAAGATCGA
TGTCATGCCAGGCTCCTCCT---CTACGTCACCCGCACCGGCCAGCGGCCCAAGTGCAAGCAATGCTCCCCCGCCGACAC
CTGTCTCTTCTGCCACCAATGTGGAGGCCACGGGGTTTGGCCTTGCCGTTTTGCTTGCCATTGCCGGCCTCATGGCTTGA
G--TGCATCTCTGTAGTCACAGGCACATGTGTATTTTATGTATATTCAAGTAATTAATACTAGCAACTATCTGTGTGTAT
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------
>chr2B_1118
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----------------------------AGTTCCAACCGCAATGGCTGCCAGGAGAACCATTCTTCTCGCCGTGGCTGCG
ATGGCCGTCCTGAGCACCGCGTCAGCGGCAATCTACAACGTGGGCGAGCCGGGCGGCGCATGGGACCTTAGCACCAACTA
CGGCACTTGGGCGTCCTCTAGGAACTTCCAAACCAGCGATCAGATCGTCTTCAAGTACTCCCCTCGGGCACACGATGTCC
TTGAAGTCAGCAAGGCAGACTACGACTCTTGCAGCACGGCCAACCCCATCACCACCTTCAACTCCGGGAATGATGTTGTC
ACCCTCACAGCCACCGGCACCCGGTACTTCATTTGTGGTTTCCCTGGTCATTGCGCGGGCGGCATGAAGGTTAAGATCGA
TGTCATGCCAGGCTCCTCCT---CTACGTCACCCGCCCCGGCCAGCGGCCCAAGTGCAAGCAATGCTCCCCCGCCGACAC
CTGTCTCCGCTGCCACCAATGTGGAGGCCACGGGATTTGGCCTTGCCGTTTTGCTTGCCATTGCCGGCCTCATGGCTTGA
G--TGCATCTCTGTAGTCGCAGGCACATGTGTATTTTATGTATATTCAAGTAATTATTACTAGCAACTATCTGTGTGTAT
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>chr2A_1160
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----------------------------------------------------------------------CATGGCTGTG
ATGGCCATCCTGAGCACCGCATCAGCGGCGATCTACAACGTTGGCGAGCCCGGTGGAGCGTGGGACCTCAGCACCAACTA
CGGCACATGGGCGTCCTCCAGGAACTTCAAAGCCGACGACCAGATCGTCTTCAAGTACTCCCCTCAAGCGCATGATGTCC
TCGAGGTCAGCAAGGCTGACTACGACTCCTGCAGCACCGCCAGCCCCATCACCACCCTCAACTCTGGGAATGATGTTGTC
ACCCTCACCGCCTCCAGCACCCGGTACTTCATTTGCGGCTTCCCTGGCCACTGCACTGGTGGCATGAAGGTTAAGATCGA
TATTATGTCTGGCTCCTCCT------CGTCACCCGCCCCAGCCAGCGGACCAAGTGCAAGCAATGCTCCCCCGCCGACCC
CTGTCTCCACTGCCACCAATGTGGAGGCCATCGGGTATGGCCTCGCCGTTTTGCTTGCCATTGCTGGCCTCATGGCTTGA
G--TGCATATCTGCAGTCGCAGGCACATGTGTACTTTGTGTATAGTCAAGTAATTATTACTAGCAACTATATGTGTGTAT
AGTC----------------------------------------------------------------------------
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>chr2B_1776
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---------------------------------------------------GAGAACGAAGAGTCGAGCGAATCAGCTCC
TCTGTTGAGCGACATGTACTATGATTATGTCAGGGAAAGATCCGTTTTGGTCGATTAGTA----CACTAATCATGTACAT
GCACGCGTGTCAGTTTGATAGTAACATAATTTCTTAGATTACCACAATTAATCTTGAAATCAAATTAATTGTGTTTAATG
CAATTAATGTCGTTTCT-AAATTATGGTCAATGTAATTTACAATTTTTTAAATTATTAGTCATGTAATGGATACATCATT
GGAGCAGCGTGAGATGTTGGATATAGGTGGTTGTTGGGTGACTCGGATCATTTGGATTCACCAAACTCGTGCTTTTATAA
ATAGTACA-------------------------------------------------------AGTAGATAAGCCCAAAA
AA-TGTCAGATGCAATAGGTTCTATTCGTTTCTCAGCTCATATTGAAGCGAATAC-------------------------
TCTTAATTTGCTTTTACCTATGATTGATGATCTATTTCGTTGTCTATCAAGAACCAATAAGGATTAGAACTCACACATCT
ATGTGTTGCTAGCAATCTGT----------ACTCCTCGGTGTGTGGCCACGCTTGGGCGGCACCACTTTTGTGAAAAACA
GTGGGAGTATAGTGTGAAGGGTCCGCCAGGTGACATTCTATTAGTCTTCTCTCTCCAGACAAATTTGAATTTTCTGAAAG
TCCAAAAAACCTTAAGTTCAAAATTTCCAAAAAGTTTCAACATTTCTCAAAATTCCGAAAAAGTTTAACTTGTAATTTCT
TAAAGTGGCAAAATTTGGAATTTTTTTAGCCATAGTTCAAACTTCCAAAAGTTTAAAAATTTGGAAGCTTCAAATCCCAT
AAAAATAT-TTGGGCTTGTTATAGTTCTCAAAGCAGATAATGTACTTTCCG-AAGTTACCAAAAAAGGAACTTTGACGTG
TA--ATAGACTCTCCAAAAAGGGAAAACTCTGGTTTGAAAGTGAACACCGTGGAGTAATCTGATTGTGACACAAGGG-
>chr2A_1793
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--------------------------------------------------------------------TGAGTCAGCTCC
TCTGTTGAGCGACATGTACTATGATTAAGTCAGGGAAGGTG-CGTTTTGGTTGATTAAGTCAGGGAAGAC----------
-----------------------------------------------------------------TAATTCTTTTTAATG
TAACTAATGTCCTTTTACAAATTACGATCAATGCAATTAACATGTTTCCAAATTATTCATGACGTGAT-GATACATCGGT
GAAGCAGCGTGTGACGTTGCATATAGGTTGCTCGATTG---CTCGGATCATCTGGATTCACCAAGCTCATGCTTTTAAAA
GTAGTATAGTCCCTCCGTCCCAAAATTCTTGTCTGTACCCGGAGGGAGTAGTAGATAGTAGATAGTAGATAAGCCCAAAA
AAATGTCAAATGCAATACATTTT-----TTTCTCAGTTCATATTGAAGCAACGAATAATCTTAATTTTTTCTG--GGGTA
TCTTAATTTGATTTTACCTATGACTGATGATCTATTTCGTTGTCTATCAAGAAACAATAAGGATTAGAAGTCACACATGT
GTGTGTTGCTAGCAATCAGTTAATGAATTGACTCATTGCCGTGTGATCACGCTTGGGCAGCACCACTGTTGT-AAAAACA
GTGTGTGTATAGTATGAA-GGTCTGCCGGGTGACATTCTATTAGTCTTCTCTCTCCAGTGAATTTTGAGTTTTCTGGAAT
TCCAAAATTTGTTGAAGTCCAAAGTTTTCGAAAATTTCAAATTTTCATAGAATTGAAAATTTTCTGGGCATGCAATTTGT
TTAAGTTGGATTTTTAAAAAAA---TTAGCCATAGTTCAAACTTCCAAAAGTTTGGAAAATTGGAAGTTTTAAATCCCAT
AAAAATTACTTGGGCTTGTTATATTTCTCAAAATAGATAATATACTTTGTGAAAGTTACCAAAAAGAGAACTTTTACTTG
TAGCATATACTTTCTACAAAGGGAAAACACTAGTTTGAAAGTGAACACCGTGGAGTCATCTGACCGTGACACAAGGGC
>SNPs
SSSSSSS-------------------------S-----------------------------------------------
-----------------------------------S--------------------------------------------
----------------------------------------------------------------------SSSSS-----
----------------------------------------------------------------------SSSSSSSS--
--------------------------------------------------------------------------------
----------------------------------S--------SSSS---------------------------------
-------------------------------------------------------------------------S-S--S-
------------------------------------------------S-S--SS-------------------------
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----------------------------------------------------S------S--------------------
-------------------------------------------------------S---S--------------------
------------------------------------------------------S-SSSSSSSSSSSSSSSSSSSSSSSS
SSSSSS-----------------------------------------------------------------SSSS-----
--------------------------------------------------------------------------------
--------------------------------S--------------------S--------------------------
------------------------------------------------------------------S------S---S--
--------------------------------------------------------------------------------
------------------S------------S------------------------S-------------S---------
-------------------------------------------------------------------------S------
----------------------------S-----------------------------------S---------------
-------------S------------------------------------------------------------------
--S------------------S-----------------------S----------------------------------
-----------------------------------------S--------------------------------------
----------------S-S--S------SSS--S----------------------------------------------
------S----------S--------------------------------------------------------------
------------------------------------------------------------SSSS--S-----S-----S-
-----SS-----------------S--------S-S-----SS-SSSS--S-SSSSSS-SS-----------S-------
--------------------------------------------------------------------------------
-------------------------------S------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------SSSSS-----
---------------------------------------------S----------------------------------
------------------------S-------------------------------------------------------
-----------S------------------------------------------------S-------------------
--------------------------------------------------------------------------------
-S------S-----------------------------------------------------------------------
---------------S----------------S--S--------------------------------------------
----------------S------------------S------------------------------------------
>forward_2380
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----------------------------------------TCAGCCAATTGGGAGCTTGT--------------------
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>reverse_4252
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-----------ATATGAAGGTCTGCCGGGTG-------------------------------------------------
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------------------------------------------------------------------------------
