>input_sequence_71180
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-ATGCAGATCTTCATGAAGACCCTGACTGGGAAAACCATCACGCTCGAGGTCGAGAGCAGCGACACCATTGACAATGTCA
AGGCCAAAATCCAGGACAAGGAAGGCAGGTAGATTTGCCCTTTGCTTCGTCTCCCGCCTGATCGATGTGCCGGCCACGAT
CATGGCCGCAATTTCTCCGGCTGCGTTTACTACATGCATATGCTTTGGGCTGAACACT--AGTACATATTTGTCGTGAGT
GCAGGGATCCCGCCGGTGCAGCAGCGGCTGATCTTCGCCGGGAAGCAGCTGGACGAGGGCCGCACGCTGGCCCACTACAA
CGTCCAGAAGGAGTCGACGCTCCACCTGGTGCTGCGCCTCCGTGGCGGCAGCCGCGGCGGCCGCCCCACCTCTATCCCGC
CCAACCTCCTGCAGCTCGCGCTCAAGCACAACGAGAAGAGGATGGTCTGCCGCAAGTGCGTATACGATCGACCATTGCCG
TGCAATCGCATGCTTATATACGTGCGCAC----GACTGATTCTGTTGCTGTGTTTTCTTGGTTGCAGGTGCTATGCGCGC
CTTCCCCCCAGGGCTACCAACTGCCGCAAGAAGAAGTGCGGCCACACCAACGAGGTGAGCTAGCGTAGTCTAATCAATTT
ATCATATGTGTTCATGCCTTGATCTGATGTACTGTATTAATTTTCAGCTGAGGCCCAAGAAGAAGTTTGTTTGA------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------
>chr6B_1_TraesCS6B01G176400
ATGAGAACCAGGGAATGGGGTGCGTGCTGAAGCAACATGGGCAAGGCCGGCTCCTCCTGGACATCAAGTGCCGTGACGAC
CAAGTAGGGGCTCGCTCCATGCTGCAGAAACCCAGTCCGCAGGAACTCCGGAGGTGCCTGATTTGGCCCTGGCAGGGATG
AAGGCGTCGACGTCGGGGACGATGGCAGCTGGCCGAGGGAGACGCGGATAGAGGGAGCAGGGGTGGTGCCGGTGCCGGTC
CTCTGCCCACATATGGATGAGTCGGCCTTGCGGGAGGCCAGCGCAGCCACGGCCAGCGTGGCGGCGGTGTTTCTCTTTTT
TCTTTATTCCTAAAGTTTCCAAAA-TTCATATCTCACTCATTTTAAATCCAAATCTAGTGAAAC-TTTTTTTAAATAGTA
ATTCAACAAGCTTTCTCCAATGACACCACTTTTGTAAAATTTGGGTTTTCCTGTATATTCGCATATTTTCCTTTTTTGGC
GATTAGTTATTACTCGGAAACAGATCTTTACCGGAAATAAGCTTCGTTGCGGTTGGAAAT-----------ATTGTATTT
TTGTATGGAAGCAAATTGCATGCGTGAAAGCAAATTGCATGAGGCCTAGTTAAATAGATGTACCGTGAC-----------
----------------TTATGGGAGTAGTTATCAGGAAACAAGTTACCTCCGTTCCTAAATAATTGTCTTTCTAGAGATT
TTAACAAGTGACTACATACGAAGCAAAATGAGTGAATCTACACTCTAAAACATGTCTACATACATCCGTATGTTGGCTAG
AAAGACAATTATTTAGAAACGGAGGGAGTAGTTCAATATTCTCCATGCAAACTAACTAATTAGATGTGATCATGCATAGG
GTTTTCGTAGCGCTTGCGTTTCCTACAATCCTACCCCTCCCCACTTCTATATAAGG-CGCCACCCACCCCGGCCATTCGC
CATTCCCATCACGACCACTGTCACGTACACGAATCCTACCTCTTGGGCGAGAGCGAGCGCGCAGTTGGTCGTTCCGGCAA
GATGCAGATCTTCATGAAGACCCTGACTGGGAAAACCATCACGCTCGAGGTCGAGAGCAGCGACACCATTGACAATGTCA
AGGCCAAAATCCAGGACAAGGAAGGCAGGTAGATTTGCCCTTTGCTTCGTCTCCCGCCTGATCGATGTGCCGGCCACGAT
CATGGCCGCAATTTCTCCGGCTGCGTTTACTACATGCATATGCTTTGGGCTGAACACT--AGTACATATTTGTCGTGAGT
GCAGGGATCCCGCCGGTGCAGCAGCGGCTGATCTTCGCCGGGAAGCAGCTGGACGAGGGCCGCACGCTGGCCCACTACAA
CGTCCAGAAGGAGTCGACGCTCCACCTGGTGCTGCGCCTCCGTGGCGGCAGCCGCGGCGGCCGCCCCACCTCTATCCCGC
CCAACCTCCTGCAGCTCGCGCTCAAGCACAACGAGAAGAGGATGGTCTGCCGCAAGTGCGTATACGATCGACCATTGCCG
TGCAATCGCATGCTTATATACGTGCGCAC----GACTGATTCTGTTGCTGTGTTTTCTTGGTTGCAGGTGCTATGCGCGC
CTTCCCCCCAGGGCTACCAACTGCCGCAAGAAGAAGTGCGGCCACACCAACGAGGTGAGCTAGCGTAGTCTAATCAATTT
ATCATATGTGTTCATGCCTTGATCTGATGTACTGTATTAATTTTCAGCTGAGGCCCAAGAAGAAGTTTGTTTGAGCAGGG
AGCGAGCGAGCAATTCTGTTTCGTCGGCTATCCTTTCGTTGGGCGTCGTCCGGCATGGACCAGCTGAATAAATCGTCTTA
GCATCGTGACTGTGTCAGAGTTTGAAGTT---------------------------GAGTCTATCGTTAGTCTCATAGTC
AAGTTCATCTCAATGTAAAGTGTCAAAGCCCGGATATTTTAATCCTTCGCAACCTGGTTTTC-----CTTCTTTTTCTTC
TCCGTTTTATCATTCACCTTCTGACGCAATCGGCCTACTACAACAAAATCCGAGTTAAATTTGTTAGGTTGATCTCTATC
CCGTTCGAACCCAGCGGGTCGGACGGGT-CCTGACTCGCGCCCTGATCGGGGGCGCCCAACCAAACCATGGTTGGTGGGC
CC-TGTGGCCCGCGCTATATA--A-TAGAGGT-GGGGCC-G-GGACACGTCTCACGAGGTTGAACGCTGCCACAAACCCC
ACCAAACACTCCCTATCGATCTAGGGTAAGCGCGATGCTCACAGGAAGCA----CACCACCGCCGCCATCTCTCTGTCCA
CATCGCCGCCGTCACC-ACATCACCATGACCGGCGCTGGATCGAGCTCATCCGCACCAGGAGAAGGTAGGTTCACCGGAT
CTACTAGCCTACTCCGATCCAA-GGTCTATCAATGGTATC--A--GCCAGATCGGGCTAGTTGATTTCAGTACAAAGAAA
CAAAAACAGAAAAAGAAAAAGAGATCCCC-TCCCCCAAGAACCCTAAAAGC-AAAAAGAGGGTAAAGACATCTCAAAGAA
AAGTTGCGCCGCCGCTCCGGTTGCGCCATTCCTCTCGATCCCGAATCGCATCGGCACGCCGAGGATCCAGGACGAAGAAC
ATTACCCCGAAAGGGGCAAAG--GGCACCACAGCCTAACCGCTCGACGGCGACGCGCTCACCGCAAGGTGGACGTACAGC
AGGCGAGCGGGAAGGCCACGGCGCCGCCGCCGTTCGCTTGGTCGCCCTCGGGCGCACAAGGGAGCAGAGGAGAGCCCTGC
CCTTGCCT
>chr6D_308
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------TGTTTCTCTTTTT
TCTTTATTCCTAAAGTTTCCAAAA-T-CATATCTCACTCATTTTAAATCCAAATCTAGTGATTTTTTTTTCTAAATT---
------CAAGCTTTCTTCAATGACACCACTTCTCTAAATTTTGGGGTTTCCTGTATATTTTCTTATTTTCCTTTTTTGGC
GATTAGTTATTACTCGGAAACAGATCTGTACCGGAAATAAGGTT-GTTGCGGTTGGAAAT-----------ATTGTTGTA
TGG------------------------AAGCAAATTGCATGAGGCCTTGTTAAATAGATGTACCGTGATTTCACTAAAAA
AAAGATGTACCGTGATTTATGGGAGTAGTTATCAAGGAAACTATGAAGAGATTAACGAGACTTCTTTCTCTTTTGAGTTT
TTCTGGCGGACCTGTCGCGCAAGATCTTTGGTCTTCCCCTGAAACCGATGAAAAAAAGAAATTAT---------------
----------------------------TAGTGTAATATTCTCCATGCAAACTAACTAATTTGATGTGATCATGCATTGG
GTTTTCGTAGCGCTTGCGTTTCCTAC-------CCCCTCCCCACTTCTATATAAGGGCGCCACCCACCCCGGCCATTCCC
CGTTCCCATCACGACCACCGTCACCTACGCGTATCCTACCTCTTGGGCTCGAGCGAGAGCGCGGTTGGTCGTTCCGGCGA
GATGCAGATCTTTGTGAAGACCCTGACGGGGAAGACCATCACCCTCGAGGTCGAGAGCAGCGACACCATCGACAATGTCA
AGGCCAAAATCCAGGACAAGGAAGGTAGGTCGATTTGTCCTTTGCTTCGTCTCCCGGCTGATCGATGTGCCGGCCACTAT
CATGGCCGCCATTTCTCCGGCCGCGTTTACTAAATGCATATGCTTTGCGCTGAGTACT--TGTACATATTTGTCGTGAGT
GCAGGGATCCCGCCGGTGCAGCAGCGGCTGATCTTCGCCGGGAAGCAGCTGGACGAGGGCCGCACGCTGGCCGACTACAA
CGTCCAGAAGGAGTCGACGCTCCACCTGGTGCTGCGCCTCCGTGGCGGCAGCCGCGGCGGCCGCCCCACCTCTATCCCGC
CCAACCTCCTGCAGCTCGCGCTCAAGCACAACGAGAAGAGGATGGTCTGCCGCAAGTGCGTATACGATCGACCATTGCCG
TGCAATTGAGTTCAC----GCGTGCGTGCCTATGACTGATTCTGTTGCTGTATTTTCTTGGTTGCAGGTGCTATGCGCGC
CTTCCCCCCAGGGCTACCAACTGCCGCAAGAAGAAGTGCGGCCACACCAACGAGGTGAGCTAGCGTAGTATAATCAACTT
ATGCTGTGTGTTGATGCCTTGATCTGATGTACTGTATTAATTTTCAGCTGAGGCCCAAGAAGAAGTTTGTTTGAGC---G
AGCGAGAGAGCAATTCTGCTTCGTCTGCTATTCTTTCGTT-GGCGTCGTCCGGCATGGACCAGCTGAATAAATCGTCTTA
GCATCGTGTCCGTGTCACGGTTTTAAGTTTTTTTTAGGGTGTCAGGGTTTTAAGTTGAGTCGATCGTTAGTTTCATAGTC
AAGTTCAACGCAATATAAAATGTCAGT--CCGGATATTGTAATCCTTCGCAACCTGTTTTTTTCCTTCTTCTTTTTCTTC
TCAGTTTTATCATTCACCTTCTGACGCAATCGGCCTGCTACAACAAAATCCGAGTTAAATT-------------------
--------------------------------------------------------------------------------
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--------
>chr6A_308
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------TGCTTCTCTTTTT
GCTTTATTCCTAAAGTTTCCAAAACT-CATGTCTCACTCATTTTAAATCCAAATCTAGTGAAAC-TTAAAAAAAA-----
--TCAACAAGCTTTCTCCAATGACACCACTTTTTTAAAATTTGGGGTTTCCTGTATATTTCCTTATTTTCCTTTTTTGGC
GATTAGTTATTACTCGGAAACAGATCTGTACCGGAAATAAGGTTCGTTGCGGTTGGAAAATATTGTACTCCATTTTGGTA
TGG------------------------AAGCAAATTGCATGAGGCCTAGTTAAAT-------------------------
--AGATGTACCGTGATTTATGGGAGTAGTTATCAGGAAC-----------------------------------------
----------------------------------------------------------AAATTGT---------------
----------------------------TAGTGTAATATTCTCCATGCAAACTAACTAATTAGATGTGATCATGCATCGG
GTTTTCGTAGCGCCTGCGTTTC--------CTACCCCTCCCCACTTCCATATAAGGGCGCCACCCACCCCGGCCATTCGC
CATTCCCATCACGACCACCATCACGTACGCGGATCCTACCTCTTGGGCGAGAGCTCGCTCGCGGTTGGTCGTTCCGGCGA
GATGCAGATCTTCGTGAAGACCTTGACGGGGAAGACCATCACCCTCGAGGTCGAGAGCAGCGACACCATCGACAATGTCA
AGGCCAAAATCCAGGACAAGGAAGGTGCGTCGATTTGTCCTTTGCTTCGTCTCCCGGCTGATCCATGTGCCGGCCACGAT
CACGGCCGCCATTTCTCTGGGCGCGTTTATG-CATGCATGTGCTTTGCGCTGAATACTACTGTACATATTTGTCGTTCGT
GCAGGGATCCCGCCGGTGCAGCAGCGGCTGATCTTCGCCGGGAAGCAGCTGGACGAGGGCCGCACGCTGGCCGACTACAA
CGTCCAGAAGGAGTCGACGCTCCACCTGGTGCTGCGCCTCCGTGGCGGCAGCCGCGGCGGCCGCCCCACCTCTATCCCGC
CCAACCTCCTGCAGCTCGCGCTCAAGCACAACGAGAAGAGGATGGTCTGCCGCAAGTGCGTATACGATCGACCACTGCCG
TGCAATTGAGATCATGCGTGCGTGCGTGCCTATGACTGATTATGTTGCTGTGTTTTCTTCGACGCAGGTGCTACGCGCGC
CTTCCCCCCAGGGCTACCAACTGCCGCAAGAAGAAGTGCGGCCACACCAACGAGGTGAGCTAGCGTAGTCTAATCAACTT
ATCATGTGTGTTGATGCTTTGATCTGATGTACTGTAATGAATTTCAGCTGAGGCCCAAGAAGAAGTTTGTTTGAGCAGCG
AGCGAGCGAGCAATTCTGCTTCGTCGGCTATTCTTTCGTTGGGCGTCGTCCGGCATGGACTAGCTGAATAAATCGTCTTA
GCATCGTGTCCGTGTCAGGGTTTTAAGTT---------------------------------------------------
--------------------------------------------------------------------------------
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--------
>chr2D_1982
--------------------------------------------------------------------------------
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------------------------------------------------------------TTGTTAGGTTGATCTCTCTC
CCGTTCGAACCCAACGGGTCGAACGGGCCCTTGACTCGCGCCCTG-TCGGGGGCGCCCAACCAAACCATGGTTGGTGGGC
CCCTGTGACCCGCGCTATATA--AACAGAGGTGGGGGCC-G-GGGCACGACTTACGAGGTTAATCGCTGCCACAATCCCC
ACCT-ACAATCCCTACCGATCTAGGGTTAGCGCGGTGCTCACGGGAAGCTCCACCACC---T-CGCCCACTCTCCGCCAT
CGCCGTG-----CGCC-CCAGCACCACGATGGCCTCCGGCTCGAGTTCATCCACTGCCGGAGAAGGTGGGTTCACCGGAT
CTACTAGCCTACTCCAATCCA--GTTCAATCAATGGTATC--A--GCCAGATCGGGCTAGTTGATTTCGGTACAAAGAAA
CAAAAACAGAAAAAGAAAAGGAAATCCCC-TTCCCCAAGAACCCTAAAAGC-AAAAAGAGGGCAAAGACATCTCAAAGAA
AAGTTGTGCCGCCGCTCCGGCCGCGCCGTTCCTCTCGATCCCGAATCGCATCGGCACGCCGAGGATCCGGGACGAAGAAC
ATTACCCCGAAAGGGGCAAAG--GGCACCACAAATGCACCGCTTGACGGCGACGCGCTC---------------------
--------------------------------------------------------------------------------
--------
>chr5D_1982
--------------------------------------------------------------------------------
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------------------------------------------------------------TTGTTAGGTTGATCTCTCTC
CCGTTCGAACCCAACGGGTCGAACGGGCCCCTGACTCACGCCCTGATCGGGGGCGCCCAACCAAATCATGGTTGGTGGGC
CCCTATGACCCGCGCTATATA--AACAGAGGTGGGGGCC-G-GGGCACGACTTACGAGGTTAATCGCTGCCACAATCCTC
ACCT-ACAATCCCTACCGATCTAGGGTTAACGCGGTGCTCGCGGGAAGCTCCACCACCGCCGCCGTCCACTCTCTGTCCA
CATCGTCACCGGCCCCTACTTCACCATGGCCGGCACTGGACCGAGCTTATCCGCACCTGGAGAAGGTAGGTTCACCGGAT
CTACTAGCCTACACCGATCCAA-GGTCTACCAATGGTATC--A--GCCAGATCGGGCTAGTTGATTTCGGTACAAAGAAA
CAAAAACAGAAGAAGAAAAAGAGATCCCC-TTCCTCAAGAACCGTAACAGC-AAAAAGAGGGCAAAGCCATCTCAAAGAA
AAGTTGCGCCGCCGCTCCGGCCACGCCGTTCCTCTCGGTCCCGAATCGCATCGGCACGCCGAGGATCCGGGACGAAGAAC
ACTACCCCGAAAGGGGCAAAG--GGCACCACAGCCTAACCGCTCGACGGCGGCGCGCTCACCGTGAGGTGGACGCACAGC
CGGCGAGGGGGGAGGCCACGGCGCCGCCACCGACCGCT------------------------------------------
--------
>chr3D_1982
--------------------------------------------------------------------------------
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------------------------------------------------------------TTGTTAGGTTGATCTCTCTT
CCGTTCGAGCCCAACGGGTCGAACGGGTCCCTGACTCACGCCTTGATCGGGGGCGCCCAACCAAACCATGGTTGGTGGAC
CCCTGTGACCCGCGCTATATA--AACAGAGGTGGGGGCC-G-GGGCGCTATTTACAAGGTTAATCGCTGCCACAATCCCC
ACCT-ACAATCCCTACCGATCTAGGGTTAGCGCGGTGCTCATGGGA-GCTCCA---CCACCT-CGCCCACTCTCCGCCAT
CGCCGTG-----CTCC-CCAGCACCACGATGGCCTCCGGCTCGAGTTCATCCACTGCTGGACAAGGTAGGTTCACCGGAT
CTACTAGCCTACTCCGATCCAAAGGTCTATCAATGGTATC--A--GCCAGATCGGGCTAGTTGATTTCGGTACAAAGAAA
CAAAAACAGAAAAAGAAAAAGAGATCCCC-TTCCTCAAGAACCCTAACAGC-AAAAAAAGGGCAAAGACATCTCAAAGAA
AAGTTGCGCCGCCGCTCCGGCCGCGCCGTTCCTCTCGATCCCGGATCGCATCGGCAAGCCGAGGATCCGGGAAGAAGAAC
--CACCCCACACGGGGCAAAG--GGCATCGCGGACAAACCGCTCGACGGCAGCGCGCTCACCGCAAGGTGGACGTGCAGC
CGGCGAGGGGGATGACCACGACGCCGCCG---------------------------------------------------
--------
>chr2D_1983
--------------------------------------------------------------------------------
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-------------------------------------------------------------TGTTAGGTTGATCTCTCTC
CCGTTCGAACCCAACGGGTCGAACGGGCCCCTGACTCGCGCCCTGATCGGGGGCGCCCAACCAAACCATGGTTGGTGGGC
CCCTGTGACCCGCGCTATATA--AACAGAGGTGGGGGCC-G-GGGCACGACTTACAAGGTTAATCGCTGCCACAATCCTC
ACCT-ACAATCCCTACCGATCTAGGGTTAGCGCGGTGCTCGCGGGAAGCTCCACCACCGCCGCCGTCCACTCTCTGTCCA
CATCGTCACCGGCCCCTACTTCACCATGGCCGGCACTGGACCGAGCTTATCCGCACCTGGAGAAGGTAGGTTCATCGGAT
CTACTAGCCTACACCGATCCAA-GGTCTACCAATGGTATC--A--GCCAGATCGGGCTAGTTGATTTCGGTACAAAGAAA
CAAAAACAGAAAAAGAAAAATAGATCCCCTTCCT-CAAGAACCGTAACAGC-AAAAAGAGGGCAAAGACATCTCAAAGAA
AAGTTGCGCCGCCGCTCCGGCCGCGCCGTTCCTCTCGATCCCGAATCGCATTGGCACGCCGAGGATCCGGGACGAAGAAC
ACTACCCCGAAAGGGGCAAAG--GGCACCACAGCCTAACCGCTCGACGGCGGCGCGCTCACCGCGAGGTGGACGCACAGC
CGGCGAGGGGGAAGGCCACGACGCCGCCACCGACCGCT------------------------------------------
--------
>chr5D_1983
--------------------------------------------------------------------------------
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-------------------------------------------------------------TGTTAGGTTGATCTCTCTC
CCGTTCGAACCCAACGGGTCGAACGGGCCCCTGACTCGCGCCCTGATCGGGGGCGCCCAACCAAACCATGGTTGGTGGGC
CCCTATGACCCGCGCTATATA--AACAGAGGTGGGGCCC-G-GG-CACGACTTATGAGGTTAATCGCTGCCACAATCCCC
ACCT-ACAATCCCTACCGATCTAGGGTTAGCGCGGTGCTCACGGGAAGCTCCACCTCCACCT-CGCCCACTCTCCGCCAT
CGCCGTG-----TGCC-CCAGCACCACGATGACCTCCGGCTCGAGTTCATCCACTGCTGGAGAAGGTAGGTTCACCGGAT
CTACTAGCCTACTCCGATCCAAAGATCTATCAATGGTATC--A--GCCAGATCGGGCTAGTTGATTTCGGTACAAAGAAA
CAAAAACAGAAAAAGAAAAGGAAATCCCC-TCCCCCAAGAACCCTAAAAGC-AAAAGGAGGGCAAAGACATCTCAAAGAA
AAGTTGCGCCGCCGCTCCGGCCGCGCCGTTCCTCTCGATCCCGAATCGCATCGGCAAGCCGAGGATCCGGGAAGAAGAAC
--CACCCCACACGGGGCAAAG--GGCATCGCGAACAAACCGCTCGACGGCGGCGCGCTCACCGCAAGGTGGACGCGCAGC
CGGCGAGGGGGATGACCACGACGCCGTCG---------------------------------------------------
--------
>chr5D_1983
--------------------------------------------------------------------------------
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-------------------------------------------------------------TGTTAGGTTGATCTCTCTC
CCATTCGAACCCAACGGGTCGAACGGGCCCCTGACTCGCGCCCTGATTGGGGGCGCCCAACGAAACCATGGTTGGTGGGC
CCCGGTGATCCGCGCTATATA--AACAGAGGTGGGGGCC-G-GG-CACGACTTACGAGGTTAATCGCTGCCACAATCCCC
ACCT-ACAATCCCTATCGATCTAGGGTTAGCGCGGTGCTCACAGGAAGCTCCA---TCACCT-CGCCCACTCTCCGCCAT
CGCCGTG-----TGCC-CCAGGACCACGATGGCCTCCGGCTCGAGTTCATCCGCTGCCGGAGAAGGTAGGTTCACCGGAT
CTACTAGCCTACTCTGATCCAA-GATCTATCAATGGTATC--A--GCCAGATCGGGCTAGTTGATTTCGGTACAAAGAAA
CAAAAACAGAAAAAGAAAAGGAAATCCCC-TCCC-CAAGAACCCTAAAAGC-AAAAAGAGGGCAAAGACATCTCAAAGAA
AAGTTGCGCCGCCGCTCCGGCCGCGCCGTTCCTCTCGATCCCGAATCGCATCGGCACGCCGAGGATCCGGGACGAAGAAC
ATTACCCCGAAAGGGGCAAAG--GGCACCACAAATGCACCGCTTGACGGCGGCGCGCTCTCC------------------
--------------------------------------------------------------------------------
--------
>chr5D_1983
--------------------------------------------------------------------------------
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-------------------------------------------------------------TGTTAGGTTGATCTCTCTC
CCGTTCGAACCCAACGGATCAAACGGGCCCCTGACTCGCGCCCTGATCGGGGGCGCCCAACCAAACCATGGTTGGTGGGC
CCCTGTGACCCGCGCTATATATAAACAGAGGTGGGGGCCGG-GG-CACGACTCACGAGGTTTATCGCTGCCACAATCCCC
ACCT-ACAATCCCTACCGATCTAGGGTTAGCGCGGTGCTCACGGGAAGCTCCACCTCCACCT-CGCCCACTCTCCGCCAT
CGCCGTG-----TGCC-CAC-CACCACGATGGCCTCCGGCTCGAGTTCATCCGCTGCTGGACAAGGTAGGTTCACCGGAT
CTACTAGCCTACTCCGATCCAAAGATCTATCAATGGTATC--AGAGCCAGATCGGGCTAGTTGATTTCGGTACAAAGAAA
CAAAA-CAGAAAAAGAAAAAGAGATCCCC-TTCCTCAAGAACCCTAACAGCAAAAAAGAGGGCAAAGACATCTCAAAGAA
AAGTTGCGCCGCCGCTCCGGCCGCGCCGTTCCTCTCGATCCCGAATCGCATCGGCAAGCCGAGGATCCGGGAAGAAGAAC
--CACCCCACACGGGGCAAAG--GGCATCGCGGACAAACCGCTCGACGGCGGCGCGCTCACCGCAAGGTGGACGTGCAGC
CGGCGAGGGGGATGACCACGACGCCGCCG---------------------------------------------------
--------
>chr3B_1983
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------TGTTTGGTTGATCTCTATC
CCGTTTGAACCCAACAGGTCGAACGGCCCCCTGACTCGCGCCCTGATCGGGGGCGCCCAACCAAACCATGGTTGGTGGGC
CCTTGTGACCCGCACTATATA--A-CAAAGGTGGAGGCC-GGGG-CACGACTCAAGAGGTTGATCACTGCCACAAACCCC
ACCGAACACTCCATACCGATCTAGGGTAAGCGCGGTGCTCACGGGAAGCA----CACCACCGCCGCCATCTCTCTGCCAT
CGCCACCATTGCCATCG---TCACCATGGCTGGCTCCGGCTCAAGCTCGTCCACAACAGGCGAAGGTAGGTTTATCGGAT
CTACTAGACTACTTTGATCCAA-GGTCTATCAATGGTATCAGA--GCCAGATAGGGCTAGTTGATTTCGGTACAAAGAAA
CAAAAACAGAAAAAGAAAAAGAGATCCCC-TTCCCCAAGAACCCTAACAAC-AAAAAGAGGGCAAAGGAATCATTGAGAA
AAGTTGCGCCACCGCTCAGGCCGCGCCGTTCCTCTCGATCCCGAATCGCATTGGCACGACGAGGATCC-GGGACGAAGA-
ACCACCCTGCAAAGGGCAAAGGGGGCACCGCAGCCAAACTGCTCGACGGCGGCGCGCTCACCGCAAGGTGGACGCGCAGC
CGGCGAGGGGGAAGGCCACGGCGCCGC-----------------------------------------------------
--------
>chr1D_1983
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------TGTTAGGTTGATCTCTCTC
CTATTCGAACCCAATGAGTCGAACGGGCCCCTGACTCGCGCCCTGATCGGGGGCGCCCAACCAAACCATGGTTGGTGGGC
CCCTGTGACCCGCGCTATATA--AACAGAGGTGGGGGCTGG-GG-CACGACTCACGAGGTTAATCGATGCCACAATCCTC
ACCT-ACAATCCCTACCGATCTAGGGTTAGCGCGGTGCTCACGGGAAGCTCCACCACC---T-CGCCTACTCTCCGCCAT
CGCCGTG-----CGCC-CAAGCACCACGATGGCCTCCGGCTCGAGTTCATTCACTGCCGGAGAAGGTAGGTTCACCGGAT
CTACTAGCCTACTCCGATCCAA-GGTCTATCAATGCTATC--A--GCCAGATCGGGCTAGTTGATTTCGGTGAAAAGAAA
CAAAAACAAAAAAAGAAAAGGAAATCCCC-TCCCCCAAGAACCCTAAAAGC-AAAAAGAGGGCAAAGACATCTCAAAGAA
AAGTTGCACCGCCGCTCCGGCCGCGCCGTTCCTCTCGATCCCGAATCGCATTGGCACGCCGAGGATCC-GGACGAAGAAC
ATTACCCCGAAAGGGGCAAAG--GGCACCACAAATGCACCGCTTGACGGCGGCGCGCTC---------------------
--------------------------------------------------------------------------------
--------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------
--------------------------S-------------------------------------------S-----SSSS
SS-------------------------------S-----------S-------------SS-S-----------------
---------------------------S-------------S----------------------------------SS-S
-S-SSSSSSSSSSSSSSSSSSSSSSSS-----------------------------------------S-----------
---------------------------------------SSSS-S-SSSSSS-SS-S-S-SSSS-S---S-S-S---S--
--SSSSS-SSS--SSSSSSS---SSSSS--SSSSSSS-SSS-SS-SS-SSS-SSSSSSS-SSS--SSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSS----SS-------------------------------------------S--
--------------------------SSSS--------------------------------------------------
------------------S---------S--S------------------------------S---------------S-
-------------S-------------S-----S--------S--------------------------S----------
-------------------------S----S------S------------------S-----------------------
---------S-----------S-------------------------S------S-----S-------------------
------------------------------------------------------------------------S-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------S-SS-S-S-SSS-S------SS----------------------------------------------------
-----------------------------------------------------------------------------S--
-----S------S-----------------------------------------------------------------S-
------------------S------------S------------------------------------------------
--------S-S-------S----S-------------------------------------S---------S--------
-------S-S----S----S-----SSSS---------S-----------------S----S------------------
--S---------------------------------S-------------------------------------------
-------------S-------S----------------------------------------------------------
-------S-----------------S------------------S----S-------------S----------------
---S------------------------------S---------------------------------------------
-------S---S----------------------S---------------------------------------------
--------------------------------------------------------------------S-----------
--------------------------------------------------------------S-----------------
--------------------SS-----S----------------------------------------S-----------
--------------------------------------------------------------------------------
S------S------------------------SS----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSS
>forward_989
--------------------------------------------------------------------------------
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---------CACGACCACTGTCACGTACA---------------------------------------------------
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--------
>reverse_2332
--------------------------------------------------------------------------------
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-----------TCACCACATCACCATGACCG-------------------------------------------------
--------------------------------------------------------------------------------
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--------
